Moc08g43430 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc08g43430
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description40S ribosomal protein S11-like
Locationchr8: 33380129 .. 33381992 (+)
RNA-Seq ExpressionMoc08g43430
SyntenyMoc08g43430
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGAACAGGTTTTTATTCAATCGCCAACCTTCACTTCTTTCTTCTGTTTAACATTCTTTGTTTCCTTTTAAGCGGCTTTAGCGTTCTGTCTCTGAATTCTTCATTCTTCATTCTTTTTTCTGCAGACCGAGAAGGCGTTTTTGAAGCAACCCAAAGTTTTTCTCTGGTAAACGGATTGAAATATACTTTCACTAGCAGTTTTAGTATGACTTGTTGGTTTTTTTTTTTTTTTTTTTGAAATTATTGTCCTGTGCATTTGTGGTTTTCTTATCTGTGATTCAATTTTTGTTCTATTCTACAATAAAATAGCTCCAAAAAAACCGGAAAGGGGAAGAGACCTGGAAAGGGTGGGAATCGTTTCTGGAAGAGCATTGGATTAGGATTCAAGACGCCAAGGGAAGCCACTGAAGGTTCTGTTCTTTACTATGATTACATTGTGTTTGTTGGCTTGCTTTATACGAACGTGTTTAGTCGCCCTTTTAACTTACTGCATATCTTGAGTGTCAAAACATTTGAAGCCAAGCTTATTGTTTATCCTTAACTGGTTGTTTTCTTTAAACAACTTTCACCATGTACTTTAATCACCAATTAATAAAACTGTGCGCTTTAATCACTATTTATCTGGGACATCGTTGATATCATACTCTTTGTTGTAATTTATGACAATTATTTCTTATAAACATGATGAACTGGAGCCACATCCTTGTTCCAAAAAAGTTCTGAAATGCTGTAGGAAGAATGCTTATCAAAATGCTATTTGTTTGACTGCTGAGAGGATAGAACTCTGATAAAGGACATATTGAATAAACATTATGAGCTGAAGGGATAGTAATATTAGGGATCCTCTTTCCTCCTCCCTTTTATTAACCTCTACTAATAGAATAGGTGGTTGTTGTCTGCATAGGTACAATGATACCCATAACTATACCTATAATATGGATGGATAGTTGATGGAGTCAGAGAAAACTTTTGTGGATAAAGGCATTTTACTATTTTCTATTTCTCAACGAGAGATTAAAATTGAATATAAAAGTGATGAATCCTTATCCTGTTTCTATTGTTATGGGCTTCTTGTCCCTAAGGCCTCTAGGTTCTATTGTTTTGTTGGATTTTACTCACTGTCTTTGTTTCTTGCCAAACAATAGAGGAAAGAATGCTAAAGCCCTAAAGCAGCCTCATTTACCCTATGTACTGTATGCATCGTTGTGTCTAAACTTTAAGGTCCAATATTTAAGCATATCCTGCTCTCATGTTCATTGATTTCCTGCAGAAAATTAGAATGTTTTTTTACTTATTTAGCATTCCAATTCTGTTGTTTTCATGCAGGAACATACATTGATAAGAAATGCCCCTTCACTGGAACTGTTTCTATTAGGGGCCGTATTTTAGCTGGAACTTGTCATAGTGCTAAGATGGTCAGGACCATTATTGTCAGGAGGAACTATCTACACTATGTTAAGAAGTATCAGAGGTACCTTTCTCACTTCCCCCTACTACTGCCTACACTCCATATTTCTCTTCGCAAAAGAACATATAACATCATGGTTCTCTGACTTCTTTTGTTCATTCTGTCTCCTTCAGGTATGAGAAAAGGCACTCCAATATTCCTGCTCACATATCTCCTTGCTTCCGTGTCAAGGAGGGCGATCATGTTATTATTGGCCAATGCAGGTACATCAAGATATGAATAATTCTCCACCTTGATTATTGTTGTGATAGTTTTTGGATTTTAAGAAAACTTGTGTCATATTTTATCATTCAAATTTCAGGCCATTGTCAAAGACAGTGAGGTTCAATGTGTTAAAGGTCATTCCTGCTGGATCCTCAAGTCGTGGGAAGAAGGCTTTTGCTGGAATTTAA

mRNA sequence

ATGGCGGAACAGACCGAGAAGGCGTTTTTGAAGCAACCCAAAGTTTTTCTCTGCTCCAAAAAAACCGGAAAGGGGAAGAGACCTGGAAAGGGTGGGAATCGTTTCTGGAAGAGCATTGGATTAGGATTCAAGACGCCAAGGGAAGCCACTGAAGGAACATACATTGATAAGAAATGCCCCTTCACTGGAACTGTTTCTATTAGGGGCCGTATTTTAGCTGGAACTTGTCATAGTGCTAAGATGGTCAGGACCATTATTGTCAGGAGGAACTATCTACACTATGTTAAGAAGTATCAGAGGTATGAGAAAAGGCACTCCAATATTCCTGCTCACATATCTCCTTGCTTCCGTGTCAAGGAGGGCGATCATGTTATTATTGGCCAATGCAGGCCATTGTCAAAGACAGTGAGGTTCAATGTGTTAAAGGTCATTCCTGCTGGATCCTCAAGTCGTGGGAAGAAGGCTTTTGCTGGAATTTAA

Coding sequence (CDS)

ATGGCGGAACAGACCGAGAAGGCGTTTTTGAAGCAACCCAAAGTTTTTCTCTGCTCCAAAAAAACCGGAAAGGGGAAGAGACCTGGAAAGGGTGGGAATCGTTTCTGGAAGAGCATTGGATTAGGATTCAAGACGCCAAGGGAAGCCACTGAAGGAACATACATTGATAAGAAATGCCCCTTCACTGGAACTGTTTCTATTAGGGGCCGTATTTTAGCTGGAACTTGTCATAGTGCTAAGATGGTCAGGACCATTATTGTCAGGAGGAACTATCTACACTATGTTAAGAAGTATCAGAGGTATGAGAAAAGGCACTCCAATATTCCTGCTCACATATCTCCTTGCTTCCGTGTCAAGGAGGGCGATCATGTTATTATTGGCCAATGCAGGCCATTGTCAAAGACAGTGAGGTTCAATGTGTTAAAGGTCATTCCTGCTGGATCCTCAAGTCGTGGGAAGAAGGCTTTTGCTGGAATTTAA

Protein sequence

MAEQTEKAFLKQPKVFLCSKKTGKGKRPGKGGNRFWKSIGLGFKTPREATEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI
Homology
[Close]
BLAST of Moc08g43430 vs. NCBI nr
Match: XP_038887258.1 (40S ribosomal protein S11-like [Benincasa hispida])

HSP 1 Score: 321.6 bits (823), Expect = 3.7e-84
Identity = 156/159 (98.11%), Postives = 157/159 (98.74%), Query Frame = 0 

Query: 1   MAEQTEKAFLKQPKVFLCSKKTGKGKRPGKGGNRFWKSIGLGFKTPREATEGTYIDKKCP 60
           MAEQTEKAFLKQPKVFLCSKK GKGKRPGKGGNRFWKSIGLGFKTPR+A EGTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLCSKKAGKGKRPGKGGNRFWKSIGLGFKTPRDAIEGTYIDKKCP 60

Query: 61  FTGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
           FTGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE
Sbjct: 61  FTGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120

Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 160
           GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 159

[Close]
BLAST of Moc08g43430 vs. NCBI nr
Match: XP_022952178.1 (40S ribosomal protein S11-like [Cucurbita moschata] >XP_022969280.1 40S ribosomal protein S11-like [Cucurbita maxima] >KAG7011817.1 40S ribosomal protein S11-3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 321.2 bits (822), Expect = 4.9e-84
Identity = 156/159 (98.11%), Postives = 157/159 (98.74%), Query Frame = 0 

Query: 1   MAEQTEKAFLKQPKVFLCSKKTGKGKRPGKGGNRFWKSIGLGFKTPREATEGTYIDKKCP 60
           MAEQTEKAFLKQPKVFLCSKK+GKGKRPGKGGNRFWKSIGLGFKTPREA EGTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLCSKKSGKGKRPGKGGNRFWKSIGLGFKTPREAVEGTYIDKKCP 60

Query: 61  FTGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
           FTGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE
Sbjct: 61  FTGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120

Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 160
           GDHVIIGQCRPLSKTVRFNVLKVIPAGSSS GKKAFAGI
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSSGKKAFAGI 159

[Close]
BLAST of Moc08g43430 vs. NCBI nr
Match: KAG6572178.1 (Glutamate receptor 3.2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 321.2 bits (822), Expect = 4.9e-84
Identity = 156/159 (98.11%), Postives = 157/159 (98.74%), Query Frame = 0 

Query: 1    MAEQTEKAFLKQPKVFLCSKKTGKGKRPGKGGNRFWKSIGLGFKTPREATEGTYIDKKCP 60
            MAEQTEKAFLKQPKVFLCSKK+GKGKRPGKGGNRFWKSIGLGFKTPREA EGTYIDKKCP
Sbjct: 1522 MAEQTEKAFLKQPKVFLCSKKSGKGKRPGKGGNRFWKSIGLGFKTPREAVEGTYIDKKCP 1581

Query: 61   FTGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
            FTGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE
Sbjct: 1582 FTGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 1641

Query: 121  GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 160
            GDHVIIGQCRPLSKTVRFNVLKVIPAGSSS GKKAFAGI
Sbjct: 1642 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSSGKKAFAGI 1680

[Close]
BLAST of Moc08g43430 vs. NCBI nr
Match: XP_008447825.1 (PREDICTED: 40S ribosomal protein S11-like [Cucumis melo] >TYK23274.1 40S ribosomal protein S11-like [Cucumis melo var. makuwa])

HSP 1 Score: 319.3 bits (817), Expect = 1.9e-83
Identity = 155/159 (97.48%), Postives = 156/159 (98.11%), Query Frame = 0 

Query: 1   MAEQTEKAFLKQPKVFLCSKKTGKGKRPGKGGNRFWKSIGLGFKTPREATEGTYIDKKCP 60
           MAEQTEKAFLKQPKVFLCSKKT KGKRPGKGGNRFWKSIGLGFKTPR+A EGTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLCSKKTAKGKRPGKGGNRFWKSIGLGFKTPRDAIEGTYIDKKCP 60

Query: 61  FTGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
           F GTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE
Sbjct: 61  FAGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120

Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 160
           GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 159

[Close]
BLAST of Moc08g43430 vs. NCBI nr
Match: XP_023554629.1 (40S ribosomal protein S11-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 318.5 bits (815), Expect = 3.2e-83
Identity = 155/159 (97.48%), Postives = 155/159 (97.48%), Query Frame = 0 

Query: 1   MAEQTEKAFLKQPKVFLCSKKTGKGKRPGKGGNRFWKSIGLGFKTPREATEGTYIDKKCP 60
           MAEQTEKAFLKQPKVFLCSKK GKGKRPGKGGNRFWKSIGLGFKTPREA EGTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLCSKKGGKGKRPGKGGNRFWKSIGLGFKTPREAVEGTYIDKKCP 60

Query: 61  FTGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
           FTGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE
Sbjct: 61  FTGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120

Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 160
           GDHVIIGQCRPLSKTVRFNVLKVIPAGSSS GKKAF GI
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSSGKKAFTGI 159

[Close]
BLAST of Moc08g43430 vs. ExPASy Swiss-Prot
Match: Q9M5M1 (40S ribosomal protein S11 OS=Euphorbia esula OX=3993 GN=RPS11 PE=2 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 1.4e-81
Identity = 147/159 (92.45%), Postives = 151/159 (94.97%), Query Frame = 0 

Query: 1   MAEQTEKAFLKQPKVFLCSKKTGKGKRPGKGGNRFWKSIGLGFKTPREATEGTYIDKKCP 60
           MAEQTEKAFLKQPKVFL SKKTGKGKRPGKGGNRFWKSIGLGFKTPREA +GTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLASKKTGKGKRPGKGGNRFWKSIGLGFKTPREAIDGTYIDKKCP 60

Query: 61  FTGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
           FTGTVSIRGRILAGTCHSAKM RTIIVRRNYLH++KKYQRYEKRHSNIPAH+SPCFRVKE
Sbjct: 61  FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHVSPCFRVKE 120

Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 160
           GDHVIIGQCRPLSKTVRFNVLKVIPAGSS   KKAF  I
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGVKKAFTAI 159

[Close]
BLAST of Moc08g43430 vs. ExPASy Swiss-Prot
Match: P25460 (40S ribosomal protein S11 OS=Zea mays OX=4577 GN=RPS11 PE=2 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 3.1e-81
Identity = 145/156 (92.95%), Postives = 152/156 (97.44%), Query Frame = 0 

Query: 1   MAEQTEKAFLKQPKVFLCSKKTGKGKRPGKGGNRFWKSIGLGFKTPREATEGTYIDKKCP 60
           MAEQTEKAFLKQPKVFL SKK+GKGK+PGKGGNRFWKSIGLGFKTPREA EGTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60

Query: 61  FTGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
           FTGTVSIRGRI+AGTCHSAKM RTIIVRRNYLH+VKKYQRYEKRHSNIPAHISPCFRVKE
Sbjct: 61  FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 120

Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAF 157
           GDHVIIGQCRPLSKTVRFNV+KVIPAGS++ GKKAF
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVVKVIPAGSAAAGKKAF 156

[Close]
BLAST of Moc08g43430 vs. ExPASy Swiss-Prot
Match: P17093 (40S ribosomal protein S11 OS=Glycine max OX=3847 GN=RPS11 PE=2 SV=2)

HSP 1 Score: 302.0 bits (772), Expect = 4.0e-81
Identity = 147/159 (92.45%), Postives = 151/159 (94.97%), Query Frame = 0 

Query: 1   MAEQTEKAFLKQPKVFLCSKKTGKGKRPGKGGNRFWKSIGLGFKTPREATEGTYIDKKCP 60
           MAEQTEKAFLKQPKVFL +KKTGKGKRPGKGGNRFWKSIGLGFKTPREA EGTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLSTKKTGKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60

Query: 61  FTGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
           FTG VSIRGRILAGTCHSAKM RTIIVRRNYLH++KKYQRYEKRHSNIPAHISP FRVKE
Sbjct: 61  FTGNVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHISPAFRVKE 120

Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 160
           GDHVIIGQCRPLSKTVRFNVLKVIPAGSSS  KKAF G+
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSGAKKAFTGM 159

[Close]
BLAST of Moc08g43430 vs. ExPASy Swiss-Prot
Match: P16181 (40S ribosomal protein S11-1 OS=Arabidopsis thaliana OX=3702 GN=RPS11A PE=2 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 4.5e-80
Identity = 144/160 (90.00%), Postives = 153/160 (95.62%), Query Frame = 0 

Query: 1   MAEQTEKAFLKQPKVFLCSKKTGKGKRPGKGGNRFWKSIGLGFKTPREATEGTYIDKKCP 60
           MAEQTEKAFLKQPKVFL SKK+GKGKRPGKGGNRFWK+IGLGFKTPREA +G Y+DKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLSSKKSGKGKRPGKGGNRFWKNIGLGFKTPREAIDGAYVDKKCP 60

Query: 61  FTGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
           FTGTVSIRGRILAGTCHSAKM RTIIVRR+YLH+VKKYQRYEKRHSNIPAH+SPCFRVKE
Sbjct: 61  FTGTVSIRGRILAGTCHSAKMQRTIIVRRDYLHFVKKYQRYEKRHSNIPAHVSPCFRVKE 120

Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSR-GKKAFAGI 160
           GDH+IIGQCRPLSKTVRFNVLKVIPAGSSS  GKKAF G+
Sbjct: 121 GDHIIIGQCRPLSKTVRFNVLKVIPAGSSSSFGKKAFTGM 160

[Close]
BLAST of Moc08g43430 vs. ExPASy Swiss-Prot
Match: P42733 (40S ribosomal protein S11-3 OS=Arabidopsis thaliana OX=3702 GN=RPS11C PE=2 SV=2)

HSP 1 Score: 298.5 bits (763), Expect = 4.5e-80
Identity = 143/159 (89.94%), Postives = 151/159 (94.97%), Query Frame = 0 

Query: 1   MAEQTEKAFLKQPKVFLCSKKTGKGKRPGKGGNRFWKSIGLGFKTPREATEGTYIDKKCP 60
           MAEQTEKAFLKQPKVFL SK +GKGKRPGKGGNRFWK+IGLGFKTPREA +G YID KCP
Sbjct: 1   MAEQTEKAFLKQPKVFLSSKISGKGKRPGKGGNRFWKNIGLGFKTPREAIDGAYIDSKCP 60

Query: 61  FTGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
           FTGTVSIRGRILAGTCHSAKM RTIIVRRNYLH+VKKYQRYEKRHSNIPAH+SPCFRVKE
Sbjct: 61  FTGTVSIRGRILAGTCHSAKMQRTIIVRRNYLHFVKKYQRYEKRHSNIPAHVSPCFRVKE 120

Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 160
           GDHVIIGQCRPLSKTVRFNVLKVIPAG+S+ GKKAF G+
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGASAFGKKAFTGV 159

[Close]
BLAST of Moc08g43430 vs. ExPASy TrEMBL
Match: A0A6J1HZI1 (40S ribosomal protein S11-like OS=Cucurbita maxima OX=3661 GN=LOC111468334 PE=3 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 2.4e-84
Identity = 156/159 (98.11%), Postives = 157/159 (98.74%), Query Frame = 0 

Query: 1   MAEQTEKAFLKQPKVFLCSKKTGKGKRPGKGGNRFWKSIGLGFKTPREATEGTYIDKKCP 60
           MAEQTEKAFLKQPKVFLCSKK+GKGKRPGKGGNRFWKSIGLGFKTPREA EGTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLCSKKSGKGKRPGKGGNRFWKSIGLGFKTPREAVEGTYIDKKCP 60

Query: 61  FTGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
           FTGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE
Sbjct: 61  FTGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120

Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 160
           GDHVIIGQCRPLSKTVRFNVLKVIPAGSSS GKKAFAGI
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSSGKKAFAGI 159

[Close]
BLAST of Moc08g43430 vs. ExPASy TrEMBL
Match: A0A6J1GJT3 (40S ribosomal protein S11-like OS=Cucurbita moschata OX=3662 GN=LOC111454930 PE=3 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 2.4e-84
Identity = 156/159 (98.11%), Postives = 157/159 (98.74%), Query Frame = 0 

Query: 1   MAEQTEKAFLKQPKVFLCSKKTGKGKRPGKGGNRFWKSIGLGFKTPREATEGTYIDKKCP 60
           MAEQTEKAFLKQPKVFLCSKK+GKGKRPGKGGNRFWKSIGLGFKTPREA EGTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLCSKKSGKGKRPGKGGNRFWKSIGLGFKTPREAVEGTYIDKKCP 60

Query: 61  FTGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
           FTGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE
Sbjct: 61  FTGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120

Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 160
           GDHVIIGQCRPLSKTVRFNVLKVIPAGSSS GKKAFAGI
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSSGKKAFAGI 159

[Close]
BLAST of Moc08g43430 vs. ExPASy TrEMBL
Match: A0A5D3DI18 (40S ribosomal protein S11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G003300 PE=3 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 9.0e-84
Identity = 155/159 (97.48%), Postives = 156/159 (98.11%), Query Frame = 0 

Query: 1   MAEQTEKAFLKQPKVFLCSKKTGKGKRPGKGGNRFWKSIGLGFKTPREATEGTYIDKKCP 60
           MAEQTEKAFLKQPKVFLCSKKT KGKRPGKGGNRFWKSIGLGFKTPR+A EGTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLCSKKTAKGKRPGKGGNRFWKSIGLGFKTPRDAIEGTYIDKKCP 60

Query: 61  FTGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
           F GTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE
Sbjct: 61  FAGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120

Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 160
           GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 159

[Close]
BLAST of Moc08g43430 vs. ExPASy TrEMBL
Match: A0A1S3BHR3 (40S ribosomal protein S11-like OS=Cucumis melo OX=3656 GN=LOC103490202 PE=3 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 9.0e-84
Identity = 155/159 (97.48%), Postives = 156/159 (98.11%), Query Frame = 0 

Query: 1   MAEQTEKAFLKQPKVFLCSKKTGKGKRPGKGGNRFWKSIGLGFKTPREATEGTYIDKKCP 60
           MAEQTEKAFLKQPKVFLCSKKT KGKRPGKGGNRFWKSIGLGFKTPR+A EGTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLCSKKTAKGKRPGKGGNRFWKSIGLGFKTPRDAIEGTYIDKKCP 60

Query: 61  FTGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
           F GTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE
Sbjct: 61  FAGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120

Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 160
           GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 159

[Close]
BLAST of Moc08g43430 vs. ExPASy TrEMBL
Match: A0A0A0K691 (Ribosomal_S17_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G025720 PE=3 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 1.7e-82
Identity = 152/159 (95.60%), Postives = 155/159 (97.48%), Query Frame = 0 

Query: 1   MAEQTEKAFLKQPKVFLCSKKTGKGKRPGKGGNRFWKSIGLGFKTPREATEGTYIDKKCP 60
           MAEQTEKAFLKQPKVFLCSKKT KG +PGKGGNRFWK+IGLGFKTPR+A EGTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLCSKKTAKGNKPGKGGNRFWKNIGLGFKTPRDAIEGTYIDKKCP 60

Query: 61  FTGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
           F GTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE
Sbjct: 61  FAGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120

Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 160
           GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 159

[Close]
BLAST of Moc08g43430 vs. TAIR 10
Match: AT3G48930.1 (Nucleic acid-binding, OB-fold-like protein )

HSP 1 Score: 298.5 bits (763), Expect = 3.2e-81
Identity = 144/160 (90.00%), Postives = 153/160 (95.62%), Query Frame = 0 

Query: 1   MAEQTEKAFLKQPKVFLCSKKTGKGKRPGKGGNRFWKSIGLGFKTPREATEGTYIDKKCP 60
           MAEQTEKAFLKQPKVFL SKK+GKGKRPGKGGNRFWK+IGLGFKTPREA +G Y+DKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLSSKKSGKGKRPGKGGNRFWKNIGLGFKTPREAIDGAYVDKKCP 60

Query: 61  FTGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
           FTGTVSIRGRILAGTCHSAKM RTIIVRR+YLH+VKKYQRYEKRHSNIPAH+SPCFRVKE
Sbjct: 61  FTGTVSIRGRILAGTCHSAKMQRTIIVRRDYLHFVKKYQRYEKRHSNIPAHVSPCFRVKE 120

Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSR-GKKAFAGI 160
           GDH+IIGQCRPLSKTVRFNVLKVIPAGSSS  GKKAF G+
Sbjct: 121 GDHIIIGQCRPLSKTVRFNVLKVIPAGSSSSFGKKAFTGM 160

[Close]
BLAST of Moc08g43430 vs. TAIR 10
Match: AT5G23740.1 (ribosomal protein S11-beta )

HSP 1 Score: 298.5 bits (763), Expect = 3.2e-81
Identity = 143/159 (89.94%), Postives = 151/159 (94.97%), Query Frame = 0 

Query: 1   MAEQTEKAFLKQPKVFLCSKKTGKGKRPGKGGNRFWKSIGLGFKTPREATEGTYIDKKCP 60
           MAEQTEKAFLKQPKVFL SK +GKGKRPGKGGNRFWK+IGLGFKTPREA +G YID KCP
Sbjct: 1   MAEQTEKAFLKQPKVFLSSKISGKGKRPGKGGNRFWKNIGLGFKTPREAIDGAYIDSKCP 60

Query: 61  FTGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
           FTGTVSIRGRILAGTCHSAKM RTIIVRRNYLH+VKKYQRYEKRHSNIPAH+SPCFRVKE
Sbjct: 61  FTGTVSIRGRILAGTCHSAKMQRTIIVRRNYLHFVKKYQRYEKRHSNIPAHVSPCFRVKE 120

Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 160
           GDHVIIGQCRPLSKTVRFNVLKVIPAG+S+ GKKAF G+
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGASAFGKKAFTGV 159

[Close]
BLAST of Moc08g43430 vs. TAIR 10
Match: AT4G30800.1 (Nucleic acid-binding, OB-fold-like protein )

HSP 1 Score: 297.0 bits (759), Expect = 9.2e-81
Identity = 143/159 (89.94%), Postives = 152/159 (95.60%), Query Frame = 0 

Query: 1   MAEQTEKAFLKQPKVFLCSKKTGKGKRPGKGGNRFWKSIGLGFKTPREATEGTYIDKKCP 60
           MAEQTEKAFLKQPKVFL SKK+GKGKRPGKGGNRFWK+IGLGFKTPREA EGTYID+KCP
Sbjct: 1   MAEQTEKAFLKQPKVFLSSKKSGKGKRPGKGGNRFWKNIGLGFKTPREAIEGTYIDQKCP 60

Query: 61  FTGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
           FTGTVSIRGRIL+GTCHSAKM RTIIVRR+YLH+VKKY+RYEKRHSNIPAH+SPCFRVKE
Sbjct: 61  FTGTVSIRGRILSGTCHSAKMQRTIIVRRDYLHFVKKYRRYEKRHSNIPAHVSPCFRVKE 120

Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 160
           GD V IGQCRPLSKTVRFNVLKVIPAGSSS GKKAF G+
Sbjct: 121 GDRVTIGQCRPLSKTVRFNVLKVIPAGSSSIGKKAFTGM 159

The following BLAST results are available for this feature:
BLAST of Moc08g43430 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038887258.13.7e-8498.1140S ribosomal protein S11-like [Benincasa hispida][more]
XP_022952178.14.9e-8498.1140S ribosomal protein S11-like [Cucurbita moschata] >XP_022969280.1 40S ribosoma... [more]
KAG6572178.14.9e-8498.11Glutamate receptor 3.2, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_008447825.11.9e-8397.48PREDICTED: 40S ribosomal protein S11-like [Cucumis melo] >TYK23274.1 40S ribosom... [more]
XP_023554629.13.2e-8397.4840S ribosomal protein S11-like [Cucurbita pepo subsp. pepo][more]
BLAST of Moc08g43430 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9M5M11.4e-8192.4540S ribosomal protein S11 OS=Euphorbia esula OX=3993 GN=RPS11 PE=2 SV=1[more]
P254603.1e-8192.9540S ribosomal protein S11 OS=Zea mays OX=4577 GN=RPS11 PE=2 SV=1[more]
P170934.0e-8192.4540S ribosomal protein S11 OS=Glycine max OX=3847 GN=RPS11 PE=2 SV=2[more]
P161814.5e-8090.0040S ribosomal protein S11-1 OS=Arabidopsis thaliana OX=3702 GN=RPS11A PE=2 SV=1[more]
P427334.5e-8089.9440S ribosomal protein S11-3 OS=Arabidopsis thaliana OX=3702 GN=RPS11C PE=2 SV=2[more]
BLAST of Moc08g43430 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1HZI12.4e-8498.1140S ribosomal protein S11-like OS=Cucurbita maxima OX=3661 GN=LOC111468334 PE=3 ... [more]
A0A6J1GJT32.4e-8498.1140S ribosomal protein S11-like OS=Cucurbita moschata OX=3662 GN=LOC111454930 PE=... [more]
A0A5D3DI189.0e-8497.4840S ribosomal protein S11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
A0A1S3BHR39.0e-8497.4840S ribosomal protein S11-like OS=Cucumis melo OX=3656 GN=LOC103490202 PE=3 SV=1[more]
A0A0A0K6911.7e-8295.60Ribosomal_S17_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G02... [more]
BLAST of Moc08g43430 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G48930.13.2e-8190.00Nucleic acid-binding, OB-fold-like protein [more]
AT5G23740.13.2e-8189.94ribosomal protein S11-beta [more]
AT4G30800.19.2e-8189.94Nucleic acid-binding, OB-fold-like protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000266Ribosomal protein S17/S11PRINTSPR00973RIBOSOMALS17coord: 131..138
score: 73.25
coord: 121..131
score: 60.91
coord: 88..111
score: 37.33
IPR000266Ribosomal protein S17/S11PFAMPF00366Ribosomal_S17coord: 74..142
e-value: 7.1E-26
score: 90.1
IPR000266Ribosomal protein S17/S11PANTHERPTHR1074440S RIBOSOMAL PROTEIN S11 FAMILY MEMBERcoord: 1..159
NoneNo IPR availableGENE3D2.40.50.1000coord: 1..158
e-value: 4.0E-83
score: 279.1
NoneNo IPR availablePANTHERPTHR10744:SF2440S RIBOSOMAL PROTEIN S11-1-RELATEDcoord: 1..159
IPR028333Ribosomal protein S17, archaeal/eukaryoticTIGRFAMTIGR03630TIGR03630coord: 53..143
e-value: 5.3E-34
score: 114.3
IPR03244040S ribosomal protein S11, N-terminalPFAMPF16205Ribosomal_S17_Ncoord: 4..72
e-value: 6.7E-31
score: 106.5
IPR019979Ribosomal protein S17, conserved sitePROSITEPS00056RIBOSOMAL_S17coord: 121..133
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 68..147

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc08g43430.1Moc08g43430.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0022627 cytosolic small ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0003723 RNA binding
molecular_function GO:0003735 structural constituent of ribosome