Moc08g42940 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc08g42940
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	PRA1 family protein
Location	chr8: 32981597 .. 32982244 (-)
RNA-Seq Expression	Moc08g42940
Synteny	Moc08g42940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGTCCTCCTCGTCGGTGAAATTCTCCGTCGGTTACAGCACCTTGTCCTCTCCGCCCGCCGCCACGATCCCGGTCATTTCCGCCGAAGCTCCTCCATCTCTCTCCAGTTCCTCCTTCCTCGAACGCGCGAAGAACACCACCCAATCACTAATCGCCACTCAGCGGCCATGGCGCGAGCTCTTAGACTTCTCCGCCTTCTCTCTCCCGCTCGGCTATGACGACGCCATGGCCAGAATCCGCCAGAACGTGAACTACTTCCGTGTCAATTACGCCTTGGTGATGCTCATCATCGTTTTATTCAGCCTCTTCTGGCACCCGATTTCGATCATCGTGTTCTTGCTCGTCTTCGTCGGCTGGCTGTTCTTCTACTTCCTCCGCGACGACCCTCTCGTCCTCTTCAACCAGACGTTCGATGATAAAATTGTGTTGGGCGTTCTGAGTATTGTTACCATAATTGCTCTTGTGTCTACTGATGTGGGATCCAATGTGTTGGGAGCTTTGATAACGGGGGTCGTCGTGGTAGGATTGCACGCTGCGTTTCGGATTACGGCCGATCATTTTCTCGATGAGGAGACCGCCGCCGGAGGTGGGTTGCTGTCGGTGGTCGGGAATCAGCAGCCACAACGGGGTTACACCCGGATTTGA

mRNA sequence

ATGTCGTCCTCCTCGTCGGTGAAATTCTCCGTCGGTTACAGCACCTTGTCCTCTCCGCCCGCCGCCACGATCCCGGTCATTTCCGCCGAAGCTCCTCCATCTCTCTCCAGTTCCTCCTTCCTCGAACGCGCGAAGAACACCACCCAATCACTAATCGCCACTCAGCGGCCATGGCGCGAGCTCTTAGACTTCTCCGCCTTCTCTCTCCCGCTCGGCTATGACGACGCCATGGCCAGAATCCGCCAGAACGTGAACTACTTCCGTGTCAATTACGCCTTGGTGATGCTCATCATCGTTTTATTCAGCCTCTTCTGGCACCCGATTTCGATCATCGTGTTCTTGCTCGTCTTCGTCGGCTGGCTGTTCTTCTACTTCCTCCGCGACGACCCTCTCGTCCTCTTCAACCAGACGTTCGATGATAAAATTGTGTTGGGCGTTCTGAGTATTGTTACCATAATTGCTCTTGTGTCTACTGATGTGGGATCCAATGTGTTGGGAGCTTTGATAACGGGGGTCGTCGTGGTAGGATTGCACGCTGCGTTTCGGATTACGGCCGATCATTTTCTCGATGAGGAGACCGCCGCCGGAGGTGGGTTGCTGTCGGTGGTCGGGAATCAGCAGCCACAACGGGGTTACACCCGGATTTGA

Coding sequence (CDS)

ATGTCGTCCTCCTCGTCGGTGAAATTCTCCGTCGGTTACAGCACCTTGTCCTCTCCGCCCGCCGCCACGATCCCGGTCATTTCCGCCGAAGCTCCTCCATCTCTCTCCAGTTCCTCCTTCCTCGAACGCGCGAAGAACACCACCCAATCACTAATCGCCACTCAGCGGCCATGGCGCGAGCTCTTAGACTTCTCCGCCTTCTCTCTCCCGCTCGGCTATGACGACGCCATGGCCAGAATCCGCCAGAACGTGAACTACTTCCGTGTCAATTACGCCTTGGTGATGCTCATCATCGTTTTATTCAGCCTCTTCTGGCACCCGATTTCGATCATCGTGTTCTTGCTCGTCTTCGTCGGCTGGCTGTTCTTCTACTTCCTCCGCGACGACCCTCTCGTCCTCTTCAACCAGACGTTCGATGATAAAATTGTGTTGGGCGTTCTGAGTATTGTTACCATAATTGCTCTTGTGTCTACTGATGTGGGATCCAATGTGTTGGGAGCTTTGATAACGGGGGTCGTCGTGGTAGGATTGCACGCTGCGTTTCGGATTACGGCCGATCATTTTCTCGATGAGGAGACCGCCGCCGGAGGTGGGTTGCTGTCGGTGGTCGGGAATCAGCAGCCACAACGGGGTTACACCCGGATTTGA

Protein sequence

MSSSSSVKFSVGYSTLSSPPAATIPVISAEAPPSLSSSSFLERAKNTTQSLIATQRPWRELLDFSAFSLPLGYDDAMARIRQNVNYFRVNYALVMLIIVLFSLFWHPISIIVFLLVFVGWLFFYFLRDDPLVLFNQTFDDKIVLGVLSIVTIIALVSTDVGSNVLGALITGVVVVGLHAAFRITADHFLDEETAAGGGLLSVVGNQQPQRGYTRI

Homology

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BLAST of Moc08g42940 vs. NCBI nr
Match: XP_022142976.1 (PRA1 family protein E [Momordica charantia])

HSP 1 Score: 395.6 bits (1015), Expect = 2.8e-106
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0


Query: 1   MSSSSSVKFSVGYSTLSSPPAATIPVISAEAPPSLSSSSFLERAKNTTQSLIATQRPWRE 60
           MSSSSSVKFSVGYSTLSSPPAATIPVISAEAPPSLSSSSFLERAKNTTQSLIATQRPWRE
Sbjct: 1   MSSSSSVKFSVGYSTLSSPPAATIPVISAEAPPSLSSSSFLERAKNTTQSLIATQRPWRE 60

Query: 61  LLDFSAFSLPLGYDDAMARIRQNVNYFRVNYALVMLIIVLFSLFWHPISIIVFLLVFVGW 120
           LLDFSAFSLPLGYDDAMARIRQNVNYFRVNYALVMLIIVLFSLFWHPISIIVFLLVFVGW
Sbjct: 61  LLDFSAFSLPLGYDDAMARIRQNVNYFRVNYALVMLIIVLFSLFWHPISIIVFLLVFVGW 120

Query: 121 LFFYFLRDDPLVLFNQTFDDKIVLGVLSIVTIIALVSTDVGSNVLGALITGVVVVGLHAA 180
           LFFYFLRDDPLVLFNQTFDDKIVLGVLSIVTIIALVSTDVGSNVLGALITGVVVVGLHAA
Sbjct: 121 LFFYFLRDDPLVLFNQTFDDKIVLGVLSIVTIIALVSTDVGSNVLGALITGVVVVGLHAA 180

Query: 181 FRITADHFLDEETAAGGGLLSVVGNQQPQRGYTRI 216
           FRITADHFLDEETAAGGGLLSVVGNQQPQRGYTRI
Sbjct: 181 FRITADHFLDEETAAGGGLLSVVGNQQPQRGYTRI 215

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BLAST of Moc08g42940 vs. NCBI nr
Match: XP_038891239.1 (PRA1 family protein F3 [Benincasa hispida])

HSP 1 Score: 337.4 bits (864), Expect = 8.9e-89
Identity = 185/212 (87.26%), Postives = 189/212 (89.15%), Query Frame = 0


Query: 5   SSVKFSVGYSTLSSPPAATIPVISAEAPPSL-SSSSFLERAKNTTQSLIATQRPWRELLD 64
           SS KFS GY  + SP AATIP  S+ APPSL SSSSFLERAK TTQSLIATQRPWREL D
Sbjct: 2   SSAKFSTGYGAVPSPAAATIPTTSSGAPPSLPSSSSFLERAKITTQSLIATQRPWRELFD 61

Query: 65  FSAFSLPLGYDDAMARIRQNVNYFRVNYALVMLIIVLFSLFWHPISIIVFLLVFVGWLFF 124
           FSAFSLPL YDDAMARIRQNVNYFRVNYALVMLIIV FSLFWHP SIIVFLL+FV W FF
Sbjct: 62  FSAFSLPLNYDDAMARIRQNVNYFRVNYALVMLIIVFFSLFWHPFSIIVFLLIFVAWFFF 121

Query: 125 YFLRDDPLVLFNQTFDDKIVLGVLSIVTIIALVSTDVGSNVLGALITGVVVVGLHAAFRI 184
           YF RD PLVLFNQTFDDK+VLGVLSI TIIALVSTDVGSNVLGALITGV VVGLHAAFRI
Sbjct: 122 YFFRDQPLVLFNQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALITGVAVVGLHAAFRI 181

Query: 185 TADHFLDEETAAGGGLLSVVGNQQPQRGYTRI 216
           TADHFLDEETAA GGLLSVVGNQQ QRGYTRI
Sbjct: 182 TADHFLDEETAAEGGLLSVVGNQQQQRGYTRI 213

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BLAST of Moc08g42940 vs. NCBI nr
Match: KAA0063596.1 (PRA1 family protein E [Cucumis melo var. makuwa] >TYK18431.1 PRA1 family protein E [Cucumis melo var. makuwa])

HSP 1 Score: 335.1 bits (858), Expect = 4.4e-88
Identity = 184/212 (86.79%), Postives = 188/212 (88.68%), Query Frame = 0


Query: 5   SSVKFSVGYSTLSSPPAATIPVISAEAPPSL-SSSSFLERAKNTTQSLIATQRPWRELLD 64
           SSVKFS GY  + SP AATIP  S+ APP   SSSSFLERAK TTQSLIATQRPWREL D
Sbjct: 2   SSVKFSSGYGAVPSPAAATIPTTSSGAPPPFPSSSSFLERAKTTTQSLIATQRPWRELFD 61

Query: 65  FSAFSLPLGYDDAMARIRQNVNYFRVNYALVMLIIVLFSLFWHPISIIVFLLVFVGWLFF 124
           FSAFSLP  YDDAMARIRQNVNYFRVNYALVMLIIV  SLFWHPISIIVFLL+FV WLFF
Sbjct: 62  FSAFSLPFSYDDAMARIRQNVNYFRVNYALVMLIIVFLSLFWHPISIIVFLLIFVAWLFF 121

Query: 125 YFLRDDPLVLFNQTFDDKIVLGVLSIVTIIALVSTDVGSNVLGALITGVVVVGLHAAFRI 184
           YF RD PLVLFNQTFDDK+VLGVLSI TIIALVSTDVGSNVLGALITGV VVGLHAAFRI
Sbjct: 122 YFFRDQPLVLFNQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALITGVAVVGLHAAFRI 181

Query: 185 TADHFLDEETAAGGGLLSVVGNQQPQRGYTRI 216
           TADHFLDEETAA GGLLSVVGNQQ QRGYTRI
Sbjct: 182 TADHFLDEETAAEGGLLSVVGNQQQQRGYTRI 213

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BLAST of Moc08g42940 vs. NCBI nr
Match: XP_004139244.1 (PRA1 family protein E [Cucumis sativus] >KGN60794.1 hypothetical protein Csa_019504 [Cucumis sativus])

HSP 1 Score: 332.8 bits (852), Expect = 2.2e-87
Identity = 183/212 (86.32%), Postives = 188/212 (88.68%), Query Frame = 0


Query: 5   SSVKFSVGYSTLSSPPAATIPVISAEAPPSL-SSSSFLERAKNTTQSLIATQRPWRELLD 64
           SSVKFS GY  + S  AATIP  S+ APPS  SSSSFLERAK TTQSLIATQRPWREL D
Sbjct: 2   SSVKFSSGYGAVPSQAAATIPTTSSGAPPSFPSSSSFLERAKTTTQSLIATQRPWRELFD 61

Query: 65  FSAFSLPLGYDDAMARIRQNVNYFRVNYALVMLIIVLFSLFWHPISIIVFLLVFVGWLFF 124
           FSAFSLP  YDDAMARIRQNVNYFRVNYALVMLIIV  SLFWHPISIIVFLL+FV WLFF
Sbjct: 62  FSAFSLPFSYDDAMARIRQNVNYFRVNYALVMLIIVFLSLFWHPISIIVFLLIFVAWLFF 121

Query: 125 YFLRDDPLVLFNQTFDDKIVLGVLSIVTIIALVSTDVGSNVLGALITGVVVVGLHAAFRI 184
           YF RD PLVLFNQTFDDK+VLGVLSI TIIALVSTDVGSNVLGALITGV VVGLH+AFRI
Sbjct: 122 YFFRDQPLVLFNQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALITGVTVVGLHSAFRI 181

Query: 185 TADHFLDEETAAGGGLLSVVGNQQPQRGYTRI 216
           TADHFLDEETAA GGLLSVVGNQQ QRGYTRI
Sbjct: 182 TADHFLDEETAAEGGLLSVVGNQQQQRGYTRI 213

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BLAST of Moc08g42940 vs. NCBI nr
Match: XP_008456115.1 (PREDICTED: PRA1 family protein E [Cucumis melo] >XP_008456124.1 PREDICTED: PRA1 family protein E [Cucumis melo])

HSP 1 Score: 332.4 bits (851), Expect = 2.9e-87
Identity = 183/212 (86.32%), Postives = 187/212 (88.21%), Query Frame = 0


Query: 5   SSVKFSVGYSTLSSPPAATIPVISAEAPPSL-SSSSFLERAKNTTQSLIATQRPWRELLD 64
           SSVKFS GY  + SP AATIP  S+ APP   SSSSFLERAK TTQSLIAT RPWREL D
Sbjct: 2   SSVKFSSGYGAVPSPAAATIPTTSSGAPPPFPSSSSFLERAKTTTQSLIATLRPWRELFD 61

Query: 65  FSAFSLPLGYDDAMARIRQNVNYFRVNYALVMLIIVLFSLFWHPISIIVFLLVFVGWLFF 124
           FSAFSLP  YDDAMARIRQNVNYFRVNYALVMLIIV  SLFWHPISIIVFLL+FV WLFF
Sbjct: 62  FSAFSLPFSYDDAMARIRQNVNYFRVNYALVMLIIVFLSLFWHPISIIVFLLIFVAWLFF 121

Query: 125 YFLRDDPLVLFNQTFDDKIVLGVLSIVTIIALVSTDVGSNVLGALITGVVVVGLHAAFRI 184
           YF RD PLVLFNQTFDDK+VLGVLSI TIIALVSTDVGSNVLGALITGV VVGLHAAFRI
Sbjct: 122 YFFRDQPLVLFNQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALITGVAVVGLHAAFRI 181

Query: 185 TADHFLDEETAAGGGLLSVVGNQQPQRGYTRI 216
           TADHFLDEETAA GGLLSVVGNQQ QRGYTRI
Sbjct: 182 TADHFLDEETAAEGGLLSVVGNQQQQRGYTRI 213

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BLAST of Moc08g42940 vs. ExPASy Swiss-Prot
Match: Q9FRR1 (PRA1 family protein E OS=Arabidopsis thaliana OX=3702 GN=PRA1E PE=1 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 9.7e-46
Identity = 102/190 (53.68%), Postives = 135/190 (71.05%), Query Frame = 0


Query: 32  PPSLSSSSFL----ERAKNTTQSLIATQRPWRELLDFSAFSLPLGYDDAMARIRQNVNYF 91
           P S S+++ +     RAK TTQS+I T RPWRE+LD SA SLP GYD+AMA ++ N++YF
Sbjct: 20  PSSTSNTTIIGTLSARAKQTTQSMITTLRPWREILDLSALSLPRGYDEAMAHLKHNISYF 79

Query: 92  RVNYALVMLIIVLFSLFWHPISIIVFLLVFVGWLFFYFLRD--DPLVLFNQTFDDKIVLG 151
           R NYAL +L IV   L +HP+S+I F++VF+GW+  YF RD  D +V+  +  DDKIVL 
Sbjct: 80  RGNYALAVLAIVFLGLIYHPMSMIAFIVVFIGWILLYFSRDANDSIVISGKEVDDKIVLV 139

Query: 152 VLSIVTIIALVSTDVGSNVLGALITGVVVVGLHAAFRITADHFLDEETAAGGGLLSVVGN 211
           +LS+VT++ALV TDVG NVL +LI G+++VG H AFR T D FLDEE+A  GGL+S    
Sbjct: 140 LLSLVTVLALVYTDVGENVLVSLIIGLLIVGAHGAFRNTDDLFLDEESARRGGLVSAGSG 199

Query: 212 QQPQRGYTRI 216
            +P   YT I
Sbjct: 200 NRPPSSYTPI 209

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BLAST of Moc08g42940 vs. ExPASy Swiss-Prot
Match: Q9LIC6 (PRA1 family protein F3 OS=Arabidopsis thaliana OX=3702 GN=PRA1F3 PE=1 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 5.9e-35
Identity = 81/167 (48.50%), Postives = 116/167 (69.46%), Query Frame = 0


Query: 28  SAEAPPSLSSSSFLERAKNTTQSLIATQRPWRELLDFSAFSLPLGYDDAMARIRQNVNYF 87
           S+ A P +   S L RAK+  ++ +AT+R WR + DF +  LP G  DA  RI+ N+ YF
Sbjct: 10  SSHASPLVDVES-LSRAKHRIKAGLATRRAWRVMFDFHSMGLPHGVSDAFTRIKTNLAYF 69

Query: 88  RVNYALVMLIIVLFSLFWHPISIIVFLLVFVGWLFFYFLRDDPLVLFNQTFDDKIVLGVL 147
           R+NYA+V+LI++ FSL WHP S+IVF ++ V W+F YFLRD+P+ LF    DD+ VL VL
Sbjct: 70  RMNYAIVVLIVIFFSLIWHPTSLIVFTVLVVVWIFLYFLRDEPIKLFRFQIDDRTVLIVL 129

Query: 148 SIVTIIALVSTDVGSNVLGALITGVVVVGLHAAFRITADHFLDEETA 195
           S++T++ L+ T+   N++GAL+TG V+V +H+  R T D FLDEE A
Sbjct: 130 SVLTVVLLLLTNATFNIVGALVTGAVLVLIHSVVRKTEDLFLDEEAA 175

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BLAST of Moc08g42940 vs. ExPASy Swiss-Prot
Match: Q9C889 (PRA1 family protein F2 OS=Arabidopsis thaliana OX=3702 GN=PRA1F2 PE=1 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 2.5e-33
Identity = 77/165 (46.67%), Postives = 116/165 (70.30%), Query Frame = 0


Query: 40  FLERAKNTTQSLIATQRPWRELLDFSAFSLPLGYDDAMARIRQNVNYFRVNYALVMLIIV 99
           ++ RAK+  +S +AT+RPW+ + DF + +LP G+ DA++RI+ N+ YFR NYA+ +L I+
Sbjct: 21  YISRAKHRIKSGLATRRPWKSMFDFESMTLPHGFFDAISRIKTNLGYFRANYAIGVLFIL 80

Query: 100 LFSLFWHPISIIVFLLVFVGWLFFYFLRDDPLVLFNQTFDDKIVLGVLSIVTIIALVSTD 159
             SL +HP S+IV  ++ V W+F YFLRD+PLV+F    DD+ VL  LS++T++ L+ T 
Sbjct: 81  FLSLLYHPTSLIVLSILVVFWIFLYFLRDEPLVVFGYQIDDRTVLIGLSVLTVVMLLLTH 140

Query: 160 VGSNVLGALITGVVVVGLHAAFRITADHFLDEETAA---GGGLLS 202
             SN+LG+L+T  V+V +HAA R + + FLDEE AA     GL+S
Sbjct: 141 ATSNILGSLLTAAVLVLIHAAVRRSDNLFLDEEAAAVTEASGLMS 185

[Close]

BLAST of Moc08g42940 vs. ExPASy Swiss-Prot
Match: Q9LIC7 (PRA1 family protein F4 OS=Arabidopsis thaliana OX=3702 GN=PRA1F4 PE=2 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 4.8e-29
Identity = 75/167 (44.91%), Postives = 107/167 (64.07%), Query Frame = 0


Query: 28  SAEAPPSLSSSSFLERAKNTTQSLIATQRPWRELLDFSAFSLPLGYDDAMARIRQNVNYF 87
           S+ A P+++  S + RAK   +  +AT+R WR + D  +  LP G  D  +RI+ N+ YF
Sbjct: 10  SSHASPAVNHES-ISRAKQRIKDGLATRRSWRVMFDLHSTGLPHGVSDVFSRIKTNLAYF 69

Query: 88  RVNYALVMLIIVLFSLFWHPISIIVFLLVFVGWLFFYFLRDDPLVLFNQTFDDKIVLGVL 147
           R NYA+V+L ++ FSL WHP S+IVF  +   W+F YFLRD PL +F    DD+ VL  L
Sbjct: 70  RSNYAIVILNVIFFSLIWHPTSLIVFTGLVFLWIFLYFLRDVPLKVFRFQIDDRAVLIGL 129

Query: 148 SIVTIIALVSTDVGSNVLGALITGVVVVGLHAAFRITADHFLDEETA 195
           S++TI+ L+ T+   N++ AL+ G V+V +HA  R T D FLDEE A
Sbjct: 130 SVITIVLLLLTNATFNIVAALMAGAVLVLIHAVIRKTDDLFLDEEAA 175

[Close]

BLAST of Moc08g42940 vs. ExPASy Swiss-Prot
Match: Q9SIY7 (PRA1 family protein B2 OS=Arabidopsis thaliana OX=3702 GN=PRA1B2 PE=1 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 6.3e-29
Identity = 81/199 (40.70%), Postives = 123/199 (61.81%), Query Frame = 0


Query: 16  LSSPPAATIPVISAEA-----PP--SLSSSSFLERAKNTTQSLIATQRPWRELLDFSAFS 75
           +SS P A +PV + +A     PP  S +  +FL R  ++ +  ++ +RPW EL+D S+F+
Sbjct: 1   MSSSP-AILPVTNQQAATQSQPPINSHAFRTFLSRLSSSLRESLSQRRPWLELVDRSSFA 60

Query: 76  LPLGYDDAMARIRQNVNYFRVNYALVMLIIVLFSLFWHPISIIVFLLVFVGWLFFYFLR- 135
            P    D+ +RIR+N+ YF+VNY+ ++ +++ FSL  HP S++V L +   W+F Y  R 
Sbjct: 61  RPDSLTDSFSRIRKNLAYFKVNYSAIVSLVLAFSLLSHPFSLLVLLSLLGSWMFLYLFRS 120

Query: 136 -DDPLVLFNQTFDDKIVLGVLSIVTIIALVSTDVGSNVLGALITGVVVVGLHAAFRITAD 195
            D PLVLF ++F D+  L  L + TI+ +  T VGS +  AL  G+ +V LH AFR+  D
Sbjct: 121 SDQPLVLFGRSFSDRETLLGLVLTTIVVVFMTSVGSLLTSALTIGIAIVCLHGAFRVPDD 180

Query: 196 HFLDEETAAGGGLLSVVGN 206
            FLDE+  A  GLLS +GN
Sbjct: 181 LFLDEQEPANAGLLSFIGN 198

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BLAST of Moc08g42940 vs. ExPASy TrEMBL
Match: A0A6J1CNT6 (PRA1 family protein OS=Momordica charantia OX=3673 GN=LOC111012974 PE=3 SV=1)

HSP 1 Score: 395.6 bits (1015), Expect = 1.3e-106
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0


Query: 1   MSSSSSVKFSVGYSTLSSPPAATIPVISAEAPPSLSSSSFLERAKNTTQSLIATQRPWRE 60
           MSSSSSVKFSVGYSTLSSPPAATIPVISAEAPPSLSSSSFLERAKNTTQSLIATQRPWRE
Sbjct: 1   MSSSSSVKFSVGYSTLSSPPAATIPVISAEAPPSLSSSSFLERAKNTTQSLIATQRPWRE 60

Query: 61  LLDFSAFSLPLGYDDAMARIRQNVNYFRVNYALVMLIIVLFSLFWHPISIIVFLLVFVGW 120
           LLDFSAFSLPLGYDDAMARIRQNVNYFRVNYALVMLIIVLFSLFWHPISIIVFLLVFVGW
Sbjct: 61  LLDFSAFSLPLGYDDAMARIRQNVNYFRVNYALVMLIIVLFSLFWHPISIIVFLLVFVGW 120

Query: 121 LFFYFLRDDPLVLFNQTFDDKIVLGVLSIVTIIALVSTDVGSNVLGALITGVVVVGLHAA 180
           LFFYFLRDDPLVLFNQTFDDKIVLGVLSIVTIIALVSTDVGSNVLGALITGVVVVGLHAA
Sbjct: 121 LFFYFLRDDPLVLFNQTFDDKIVLGVLSIVTIIALVSTDVGSNVLGALITGVVVVGLHAA 180

Query: 181 FRITADHFLDEETAAGGGLLSVVGNQQPQRGYTRI 216
           FRITADHFLDEETAAGGGLLSVVGNQQPQRGYTRI
Sbjct: 181 FRITADHFLDEETAAGGGLLSVVGNQQPQRGYTRI 215

[Close]

BLAST of Moc08g42940 vs. ExPASy TrEMBL
Match: A0A5A7VAZ9 (PRA1 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001570 PE=3 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 2.1e-88
Identity = 184/212 (86.79%), Postives = 188/212 (88.68%), Query Frame = 0


Query: 5   SSVKFSVGYSTLSSPPAATIPVISAEAPPSL-SSSSFLERAKNTTQSLIATQRPWRELLD 64
           SSVKFS GY  + SP AATIP  S+ APP   SSSSFLERAK TTQSLIATQRPWREL D
Sbjct: 2   SSVKFSSGYGAVPSPAAATIPTTSSGAPPPFPSSSSFLERAKTTTQSLIATQRPWRELFD 61

Query: 65  FSAFSLPLGYDDAMARIRQNVNYFRVNYALVMLIIVLFSLFWHPISIIVFLLVFVGWLFF 124
           FSAFSLP  YDDAMARIRQNVNYFRVNYALVMLIIV  SLFWHPISIIVFLL+FV WLFF
Sbjct: 62  FSAFSLPFSYDDAMARIRQNVNYFRVNYALVMLIIVFLSLFWHPISIIVFLLIFVAWLFF 121

Query: 125 YFLRDDPLVLFNQTFDDKIVLGVLSIVTIIALVSTDVGSNVLGALITGVVVVGLHAAFRI 184
           YF RD PLVLFNQTFDDK+VLGVLSI TIIALVSTDVGSNVLGALITGV VVGLHAAFRI
Sbjct: 122 YFFRDQPLVLFNQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALITGVAVVGLHAAFRI 181

Query: 185 TADHFLDEETAAGGGLLSVVGNQQPQRGYTRI 216
           TADHFLDEETAA GGLLSVVGNQQ QRGYTRI
Sbjct: 182 TADHFLDEETAAEGGLLSVVGNQQQQRGYTRI 213

[Close]

BLAST of Moc08g42940 vs. ExPASy TrEMBL
Match: A0A0A0LIB9 (PRA1 family protein OS=Cucumis sativus OX=3659 GN=Csa_2G010300 PE=3 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 1.1e-87
Identity = 183/212 (86.32%), Postives = 188/212 (88.68%), Query Frame = 0


Query: 5   SSVKFSVGYSTLSSPPAATIPVISAEAPPSL-SSSSFLERAKNTTQSLIATQRPWRELLD 64
           SSVKFS GY  + S  AATIP  S+ APPS  SSSSFLERAK TTQSLIATQRPWREL D
Sbjct: 2   SSVKFSSGYGAVPSQAAATIPTTSSGAPPSFPSSSSFLERAKTTTQSLIATQRPWRELFD 61

Query: 65  FSAFSLPLGYDDAMARIRQNVNYFRVNYALVMLIIVLFSLFWHPISIIVFLLVFVGWLFF 124
           FSAFSLP  YDDAMARIRQNVNYFRVNYALVMLIIV  SLFWHPISIIVFLL+FV WLFF
Sbjct: 62  FSAFSLPFSYDDAMARIRQNVNYFRVNYALVMLIIVFLSLFWHPISIIVFLLIFVAWLFF 121

Query: 125 YFLRDDPLVLFNQTFDDKIVLGVLSIVTIIALVSTDVGSNVLGALITGVVVVGLHAAFRI 184
           YF RD PLVLFNQTFDDK+VLGVLSI TIIALVSTDVGSNVLGALITGV VVGLH+AFRI
Sbjct: 122 YFFRDQPLVLFNQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALITGVTVVGLHSAFRI 181

Query: 185 TADHFLDEETAAGGGLLSVVGNQQPQRGYTRI 216
           TADHFLDEETAA GGLLSVVGNQQ QRGYTRI
Sbjct: 182 TADHFLDEETAAEGGLLSVVGNQQQQRGYTRI 213

[Close]

BLAST of Moc08g42940 vs. ExPASy TrEMBL
Match: A0A1S3C2L3 (PRA1 family protein OS=Cucumis melo OX=3656 GN=LOC103496149 PE=3 SV=1)

HSP 1 Score: 332.4 bits (851), Expect = 1.4e-87
Identity = 183/212 (86.32%), Postives = 187/212 (88.21%), Query Frame = 0


Query: 5   SSVKFSVGYSTLSSPPAATIPVISAEAPPSL-SSSSFLERAKNTTQSLIATQRPWRELLD 64
           SSVKFS GY  + SP AATIP  S+ APP   SSSSFLERAK TTQSLIAT RPWREL D
Sbjct: 2   SSVKFSSGYGAVPSPAAATIPTTSSGAPPPFPSSSSFLERAKTTTQSLIATLRPWRELFD 61

Query: 65  FSAFSLPLGYDDAMARIRQNVNYFRVNYALVMLIIVLFSLFWHPISIIVFLLVFVGWLFF 124
           FSAFSLP  YDDAMARIRQNVNYFRVNYALVMLIIV  SLFWHPISIIVFLL+FV WLFF
Sbjct: 62  FSAFSLPFSYDDAMARIRQNVNYFRVNYALVMLIIVFLSLFWHPISIIVFLLIFVAWLFF 121

Query: 125 YFLRDDPLVLFNQTFDDKIVLGVLSIVTIIALVSTDVGSNVLGALITGVVVVGLHAAFRI 184
           YF RD PLVLFNQTFDDK+VLGVLSI TIIALVSTDVGSNVLGALITGV VVGLHAAFRI
Sbjct: 122 YFFRDQPLVLFNQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALITGVAVVGLHAAFRI 181

Query: 185 TADHFLDEETAAGGGLLSVVGNQQPQRGYTRI 216
           TADHFLDEETAA GGLLSVVGNQQ QRGYTRI
Sbjct: 182 TADHFLDEETAAEGGLLSVVGNQQQQRGYTRI 213

[Close]

BLAST of Moc08g42940 vs. ExPASy TrEMBL
Match: A0A6J1G2T7 (PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111450303 PE=3 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 1.4e-84
Identity = 183/213 (85.92%), Postives = 189/213 (88.73%), Query Frame = 0


Query: 5   SSVKFSVGYSTLSSPPAATIPVISAEAPPSL-SSSSFLERAKNTTQSLIATQRPWRELLD 64
           S VKFS GY T+ SP A+T    SA  PPS  SSSSFLERAK+TTQSLIAT+RPWREL D
Sbjct: 2   SPVKFSAGYGTVPSPAAST----SAGVPPSFPSSSSFLERAKSTTQSLIATRRPWRELFD 61

Query: 65  FSAFSLPLGYDDAMARIRQNVNYFRVNYALVMLIIVLFSLFWHPISIIVFLLVFVGWLFF 124
           FSAFSLP  YDDAMARIRQNV+YFRVNYALVMLIIV  SLFWHPISIIVFLL+FVGWLF 
Sbjct: 62  FSAFSLPFSYDDAMARIRQNVDYFRVNYALVMLIIVFLSLFWHPISIIVFLLIFVGWLFC 121

Query: 125 YFLRDDPLVLFNQTFDDKIVLGVLSIVTIIALVSTDVGSNVLGALITGVVVVGLHAAFRI 184
           YFLRD PLVLFNQTFDDKIVLGVLSIVTIIALVSTDVGSNVLGALITGV VVGLHAAFRI
Sbjct: 122 YFLRDQPLVLFNQTFDDKIVLGVLSIVTIIALVSTDVGSNVLGALITGVAVVGLHAAFRI 181

Query: 185 TADHFLDEETAAGGGLLSVVGN-QQPQRGYTRI 216
           TADHFLDEETAA GGLLSVVGN QQ QRGYTRI
Sbjct: 182 TADHFLDEETAAEGGLLSVVGNQQQQQRGYTRI 210

[Close]

BLAST of Moc08g42940 vs. TAIR 10
Match: AT1G08770.1 (prenylated RAB acceptor 1.E )

HSP 1 Score: 184.9 bits (468), Expect = 6.9e-47
Identity = 102/190 (53.68%), Postives = 135/190 (71.05%), Query Frame = 0


Query: 32  PPSLSSSSFL----ERAKNTTQSLIATQRPWRELLDFSAFSLPLGYDDAMARIRQNVNYF 91
           P S S+++ +     RAK TTQS+I T RPWRE+LD SA SLP GYD+AMA ++ N++YF
Sbjct: 20  PSSTSNTTIIGTLSARAKQTTQSMITTLRPWREILDLSALSLPRGYDEAMAHLKHNISYF 79

Query: 92  RVNYALVMLIIVLFSLFWHPISIIVFLLVFVGWLFFYFLRD--DPLVLFNQTFDDKIVLG 151
           R NYAL +L IV   L +HP+S+I F++VF+GW+  YF RD  D +V+  +  DDKIVL 
Sbjct: 80  RGNYALAVLAIVFLGLIYHPMSMIAFIVVFIGWILLYFSRDANDSIVISGKEVDDKIVLV 139

Query: 152 VLSIVTIIALVSTDVGSNVLGALITGVVVVGLHAAFRITADHFLDEETAAGGGLLSVVGN 211
           +LS+VT++ALV TDVG NVL +LI G+++VG H AFR T D FLDEE+A  GGL+S    
Sbjct: 140 LLSLVTVLALVYTDVGENVLVSLIIGLLIVGAHGAFRNTDDLFLDEESARRGGLVSAGSG 199

Query: 212 QQPQRGYTRI 216
            +P   YT I
Sbjct: 200 NRPPSSYTPI 209

[Close]

BLAST of Moc08g42940 vs. TAIR 10
Match: AT3G13720.1 (PRA1 (Prenylated rab acceptor) family protein )

HSP 1 Score: 149.1 bits (375), Expect = 4.2e-36
Identity = 81/167 (48.50%), Postives = 116/167 (69.46%), Query Frame = 0


Query: 28  SAEAPPSLSSSSFLERAKNTTQSLIATQRPWRELLDFSAFSLPLGYDDAMARIRQNVNYF 87
           S+ A P +   S L RAK+  ++ +AT+R WR + DF +  LP G  DA  RI+ N+ YF
Sbjct: 10  SSHASPLVDVES-LSRAKHRIKAGLATRRAWRVMFDFHSMGLPHGVSDAFTRIKTNLAYF 69

Query: 88  RVNYALVMLIIVLFSLFWHPISIIVFLLVFVGWLFFYFLRDDPLVLFNQTFDDKIVLGVL 147
           R+NYA+V+LI++ FSL WHP S+IVF ++ V W+F YFLRD+P+ LF    DD+ VL VL
Sbjct: 70  RMNYAIVVLIVIFFSLIWHPTSLIVFTVLVVVWIFLYFLRDEPIKLFRFQIDDRTVLIVL 129

Query: 148 SIVTIIALVSTDVGSNVLGALITGVVVVGLHAAFRITADHFLDEETA 195
           S++T++ L+ T+   N++GAL+TG V+V +H+  R T D FLDEE A
Sbjct: 130 SVLTVVLLLLTNATFNIVGALVTGAVLVLIHSVVRKTEDLFLDEEAA 175

[Close]

BLAST of Moc08g42940 vs. TAIR 10
Match: AT1G55190.1 (PRA1 (Prenylated rab acceptor) family protein )

HSP 1 Score: 143.7 bits (361), Expect = 1.8e-34
Identity = 77/165 (46.67%), Postives = 116/165 (70.30%), Query Frame = 0


Query: 40  FLERAKNTTQSLIATQRPWRELLDFSAFSLPLGYDDAMARIRQNVNYFRVNYALVMLIIV 99
           ++ RAK+  +S +AT+RPW+ + DF + +LP G+ DA++RI+ N+ YFR NYA+ +L I+
Sbjct: 21  YISRAKHRIKSGLATRRPWKSMFDFESMTLPHGFFDAISRIKTNLGYFRANYAIGVLFIL 80

Query: 100 LFSLFWHPISIIVFLLVFVGWLFFYFLRDDPLVLFNQTFDDKIVLGVLSIVTIIALVSTD 159
             SL +HP S+IV  ++ V W+F YFLRD+PLV+F    DD+ VL  LS++T++ L+ T 
Sbjct: 81  FLSLLYHPTSLIVLSILVVFWIFLYFLRDEPLVVFGYQIDDRTVLIGLSVLTVVMLLLTH 140

Query: 160 VGSNVLGALITGVVVVGLHAAFRITADHFLDEETAA---GGGLLS 202
             SN+LG+L+T  V+V +HAA R + + FLDEE AA     GL+S
Sbjct: 141 ATSNILGSLLTAAVLVLIHAAVRRSDNLFLDEEAAAVTEASGLMS 185

[Close]

BLAST of Moc08g42940 vs. TAIR 10
Match: AT3G13710.1 (prenylated RAB acceptor 1.F4 )

HSP 1 Score: 129.4 bits (324), Expect = 3.4e-30
Identity = 75/167 (44.91%), Postives = 107/167 (64.07%), Query Frame = 0


Query: 28  SAEAPPSLSSSSFLERAKNTTQSLIATQRPWRELLDFSAFSLPLGYDDAMARIRQNVNYF 87
           S+ A P+++  S + RAK   +  +AT+R WR + D  +  LP G  D  +RI+ N+ YF
Sbjct: 10  SSHASPAVNHES-ISRAKQRIKDGLATRRSWRVMFDLHSTGLPHGVSDVFSRIKTNLAYF 69

Query: 88  RVNYALVMLIIVLFSLFWHPISIIVFLLVFVGWLFFYFLRDDPLVLFNQTFDDKIVLGVL 147
           R NYA+V+L ++ FSL WHP S+IVF  +   W+F YFLRD PL +F    DD+ VL  L
Sbjct: 70  RSNYAIVILNVIFFSLIWHPTSLIVFTGLVFLWIFLYFLRDVPLKVFRFQIDDRAVLIGL 129

Query: 148 SIVTIIALVSTDVGSNVLGALITGVVVVGLHAAFRITADHFLDEETA 195
           S++TI+ L+ T+   N++ AL+ G V+V +HA  R T D FLDEE A
Sbjct: 130 SVITIVLLLLTNATFNIVAALMAGAVLVLIHAVIRKTDDLFLDEEAA 175

[Close]

BLAST of Moc08g42940 vs. TAIR 10
Match: AT2G40380.1 (prenylated RAB acceptor 1.B2 )

HSP 1 Score: 129.0 bits (323), Expect = 4.5e-30
Identity = 81/199 (40.70%), Postives = 123/199 (61.81%), Query Frame = 0


Query: 16  LSSPPAATIPVISAEA-----PP--SLSSSSFLERAKNTTQSLIATQRPWRELLDFSAFS 75
           +SS P A +PV + +A     PP  S +  +FL R  ++ +  ++ +RPW EL+D S+F+
Sbjct: 1   MSSSP-AILPVTNQQAATQSQPPINSHAFRTFLSRLSSSLRESLSQRRPWLELVDRSSFA 60

Query: 76  LPLGYDDAMARIRQNVNYFRVNYALVMLIIVLFSLFWHPISIIVFLLVFVGWLFFYFLR- 135
            P    D+ +RIR+N+ YF+VNY+ ++ +++ FSL  HP S++V L +   W+F Y  R 
Sbjct: 61  RPDSLTDSFSRIRKNLAYFKVNYSAIVSLVLAFSLLSHPFSLLVLLSLLGSWMFLYLFRS 120

Query: 136 -DDPLVLFNQTFDDKIVLGVLSIVTIIALVSTDVGSNVLGALITGVVVVGLHAAFRITAD 195
            D PLVLF ++F D+  L  L + TI+ +  T VGS +  AL  G+ +V LH AFR+  D
Sbjct: 121 SDQPLVLFGRSFSDRETLLGLVLTTIVVVFMTSVGSLLTSALTIGIAIVCLHGAFRVPDD 180

Query: 196 HFLDEETAAGGGLLSVVGN 206
            FLDE+  A  GLLS +GN
Sbjct: 181 LFLDEQEPANAGLLSFIGN 198

The following BLAST results are available for this feature:

BLAST of Moc08g42940 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022142976.1	2.8e-106	100.00	PRA1 family protein E [Momordica charantia]	[more]
XP_038891239.1	8.9e-89	87.26	PRA1 family protein F3 [Benincasa hispida]	[more]
KAA0063596.1	4.4e-88	86.79	PRA1 family protein E [Cucumis melo var. makuwa] >TYK18431.1 PRA1 family protein...	[more]
XP_004139244.1	2.2e-87	86.32	PRA1 family protein E [Cucumis sativus] >KGN60794.1 hypothetical protein Csa_019...	[more]
XP_008456115.1	2.9e-87	86.32	PREDICTED: PRA1 family protein E [Cucumis melo] >XP_008456124.1 PREDICTED: PRA1 ...	[more]

BLAST of Moc08g42940 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FRR1	9.7e-46	53.68	PRA1 family protein E OS=Arabidopsis thaliana OX=3702 GN=PRA1E PE=1 SV=1	[more]
Q9LIC6	5.9e-35	48.50	PRA1 family protein F3 OS=Arabidopsis thaliana OX=3702 GN=PRA1F3 PE=1 SV=1	[more]
Q9C889	2.5e-33	46.67	PRA1 family protein F2 OS=Arabidopsis thaliana OX=3702 GN=PRA1F2 PE=1 SV=1	[more]
Q9LIC7	4.8e-29	44.91	PRA1 family protein F4 OS=Arabidopsis thaliana OX=3702 GN=PRA1F4 PE=2 SV=1	[more]
Q9SIY7	6.3e-29	40.70	PRA1 family protein B2 OS=Arabidopsis thaliana OX=3702 GN=PRA1B2 PE=1 SV=1	[more]

BLAST of Moc08g42940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CNT6	1.3e-106	100.00	PRA1 family protein OS=Momordica charantia OX=3673 GN=LOC111012974 PE=3 SV=1	[more]
A0A5A7VAZ9	2.1e-88	86.79	PRA1 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G...	[more]
A0A0A0LIB9	1.1e-87	86.32	PRA1 family protein OS=Cucumis sativus OX=3659 GN=Csa_2G010300 PE=3 SV=1	[more]
A0A1S3C2L3	1.4e-87	86.32	PRA1 family protein OS=Cucumis melo OX=3656 GN=LOC103496149 PE=3 SV=1	[more]
A0A6J1G2T7	1.4e-84	85.92	PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111450303 PE=3 SV=1	[more]

BLAST of Moc08g42940 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G08770.1	6.9e-47	53.68	prenylated RAB acceptor 1.E	[more]
AT3G13720.1	4.2e-36	48.50	PRA1 (Prenylated rab acceptor) family protein	[more]
AT1G55190.1	1.8e-34	46.67	PRA1 (Prenylated rab acceptor) family protein	[more]
AT3G13710.1	3.4e-30	44.91	prenylated RAB acceptor 1.F4	[more]
AT2G40380.1	4.5e-30	40.70	prenylated RAB acceptor 1.B2	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004895	Prenylated rab acceptor PRA1	PFAM	PF03208	PRA1	coord: 52..192 e-value: 7.8E-47 score: 158.5
IPR004895	Prenylated rab acceptor PRA1	PANTHER	PTHR19317	PRENYLATED RAB ACCEPTOR 1-RELATED	coord: 31..212
None	No IPR available	PANTHER	PTHR19317:SF13	PRA1 FAMILY PROTEIN	coord: 31..212

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc08g42940.1	Moc08g42940.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane