Moc08g42290 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc08g42290
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Locationchr8: 32394660 .. 32397568 (+)
RNA-Seq ExpressionMoc08g42290
SyntenyMoc08g42290
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGGAAGTGATCGCTGTGATGGAAAGCAAAGAGACAACTGCCACTATAGAGTTTCCGCACTTGAAGACTTTATCTCTAGATTACGTACCACGGGTTCGATGTTTTTGGTCCCAAATGGAACGAATCGGAGAATCAAATTTAGAAAAAGTCGAGACAAGCAAAATAAGCAATGAGGGTTCATTCTTCAGCGAAGAGGTAAGCTCCTTAAATTTCAACCATTTTGTATTCACAATAACACATTTTATGTATCATATACACCCAACTTTTTTATTATTATTATTTTGTTTCCTTGTCAAAACTTATGTTTATATTTGAGTGAAATTAAATTTTTGTCACCTTTTGTAAGTTTCAATTGGGTCACCATGATTATAAAATTTTTAATTATAGTCTTTATATAGTTTGAGTTAGTTTCAATTTAGTTCATGAGATTTGAATTTGGGTTAGTTTCAATTTGGATCATGAGATTTGAACTTAATTTCATATATCCGTGAGTGTCTGGACTAGTTTGTACATCGACTTATTTTTTTAGTGGGTGAAACACAATTTATAAACAATACGTAAGATTTAACAAAATTTAGGGTTTAGATTGGAATTAAGTCTAAACTCTAAAGATAAAAAACTATAAAGACTAAATAGAAACTTTATTGACTAAGTTAGAAACTTCTAAAATTATAAGGATAAAATTGAAACTATATCTCAAACCATAGGGCAAGTTTTTTCTAGATAGAGTTTTAATTTTAGTAGCACCCAGAATTTTTCTCTCCAGAGTGAGAGTAGGAGACCTGCCTATGTGCAGGAAGCGCCATCATATTCCTCTGGGTTTGTTCTGAGGGTGCTTGTTTTGCAGAAAGATAGTTTGTTAACCAAAATGAATATTGATGACATTACCTATCAATGGAGGAAGATGAAGCTCACCTCTGAGGAGGAGGAGGCGGCTGATTTGAGCAGTCATTTTCCTTCCTTACTGATCATATTTGGAAATATATCCAAGGTTGAAAAGGTGACCTTTTTTTCGGTGGGAGGAAAGGAAATACTTATAAAGGCGGTGCCATGAAAGGTACCTTGGCCTTCCAGCTTCTCTATCACGTAAGAAAAAACAGTCATTTTCCTTCCTTACTAATTGTATTTGGAAATATATCCAAGGCTATAAAGGTGACCTCTTTTCGACGGGAGGAAAGGCAATACTCATAAAGGCGGTGGTGCAAGCTATTCCAACATATGCGATGGGCCGTTTTAGGCTTCCAAAAGGATTTATTCAGGCTTCCAAAAGGATTTATTCAATATGACTGTAATAGATTGATGGCAAGGTTCTAGTGGGGTGGAGGCATGGAGCGGAGACAGGTCCACTGGGTCATGTGGAAGGCATTGTGTGTGTCTAAATTTAAGGGTGGCGTTGGCTTTTGGGATCTCGAACTTTTTAACAAAGCTCTTCTAGCAGAGCAAGGCTGGCGGATTATGACTAAGCCGAACTCTCTACTAGCTTTGGCTCTAAAAATAAAATATTTTGCTGACTGTTCCTTTTTAGAGGCCTCGGCAAGGAAACAAGATTCTTTTATTTGGAAGAGTATTATGTGGGGGGAAGCAACTTCTTTCTAAAGGTATCCAGTGGAGGGTTGGAAATGGTGATCAAGTTTTTCTCCAAAGAGGCAAATGGGTGCCTAGGCCAGGGTCATTTACTACTACGTTTCCCTATAGGGGAGGGGAGCTTCTGATAAGAAAGTCTCTTCTCTCATTCTTCCAAATGGTGGGTGGGATAGAAATGAGGTTACAAATAACTTTCCCGAGGAGGATGTGCAGTTAATCCTCAATATACACTTCCAAAGAGAAGGGTTGAGGATTCTTTATTATGGCATTACTCCCAAGATGACATCTATACCGTGAAAAGTGGCAGTCGAATTTTCAGGTTATGTTTCAATAGTGGAAGGAGTTGTGGTCGCTTAATGTGCCTAGCAAAATGAAAGTGTTTGGGTGGAAAGCCTTTAAAGATTTCCTCTCGACGGGAACAACCCTTACTAATCGAGGAATGGATGTAGACAGTAAATGTTTTAAATATGGTGGGATGGCTGAGATCCCATGTCATGCTATATGGAGTTGTAAATAGTAAACACAATAGACATCTTTGGAAGGAAACACCTTTTTCCTATATGAATCACCCTGAGAGGTTTCACTCTATGGCTGATCTATTGTGGTGGTTTTGGTTAGCTCTCTCTTTGGTTGTTCTTAGCTATATGTTGGGAAATCTGGGGAAACAGAAATAAGGAAAGGTTTGGCGAGGGTGGTGTTAGTTGCAATCAGAGAGATGTCTGGAAATGGGTTGCATCCTACATTATCAGTATAAAACGACTCATATGCGGGTTAGAAGTGGAGACCCAAAACAATTACTGATAATGGTGTTCGGCTGAGGCGGTGCCCCCGCAATGAAGATTATCTGAAATTAGACACAGACATTGCTATTAGGAAAGGAAGAAAACTGAATGGAAATTGGAGCTGTTATTTGGAATATGAGGGGTGAAGTTACGTTCACCTTCTCAAAAGAGGTTTCCTTTATGTGTGTGACTCCATGGTGGCGGAAGCTTTCGCAATCCGTGAAAGTTTGTCTGAAGCAATCAAGCTGGGCTTCTTCCATATTGAAATTGAACCAGATTAACTCTTGGTGATTAGAAGATTGGAGGATAATGCTGTTGATAAAACTGAATTAAGGTATGATTTTGGGGGAAATTACTGAGTTAACAGCTTACCTTACAAATGTGAAATTCTCCCAGTGTCTCTGTGCATGCAATCGGTTTGCACATGAACTGGCGAGGTTGGCCGTCGACAATGGTTTTTCTGGTGCGTGGATTGAAGTGGTGCCTTCTCCTCTTCCAGCGATCTGGGTGGCAGAGTCCAATGGCGTCGGGCTGTGTTAA

mRNA sequence

ATGTTGGAAGTGATCGCTGTGATGGAAAGCAAAGAGACAACTGCCACTATAGAGTTTCCGCACTTGAAGACTTTATCTCTAGATTACGTACCACGGGTTCGATGTTTTTGGTCCCAAATGGAACGAATCGGAGAATCAAATTTAGAAAAAGTCGAGACAAGCAAAATAAGCAATGAGGGTTCATTCTTCAGCGAAGAGAAAGATAGTTTGTTAACCAAAATGAATATTGATGACATTACCTATCAATGGAGGAAGATGAAGCTCACCTCTGAGGAGGAGGAGGCGGCTGATTTGAGCAGTCATTTTCCTTCCTTACTGATCATATTTGGAAATATATCCAAGGTTGAAAAGGGGAGGGGAGCTTCTGATAAGAAAGTCTCTTCTCTCATTCTTCCAAATGGTGGGTGGGATAGAAATGAGCTATATGTTGGGAAATCTGGGGAAACAGAAATAAGGAAAGGTTTGGCGAGGGTGGTGTTAGTTGCAATCAGAGAGATGTCTGGAAATGGGTTGCATCCTACATTATCATGTCTCTGTGCATGCAATCGGTTTGCACATGAACTGGCGAGGTTGGCCGTCGACAATGGTTTTTCTGGTGCGTGGATTGAAGTGGTGCCTTCTCCTCTTCCAGCGATCTGGGTGGCAGAGTCCAATGGCGTCGGGCTGTGTTAA

Coding sequence (CDS)

ATGTTGGAAGTGATCGCTGTGATGGAAAGCAAAGAGACAACTGCCACTATAGAGTTTCCGCACTTGAAGACTTTATCTCTAGATTACGTACCACGGGTTCGATGTTTTTGGTCCCAAATGGAACGAATCGGAGAATCAAATTTAGAAAAAGTCGAGACAAGCAAAATAAGCAATGAGGGTTCATTCTTCAGCGAAGAGAAAGATAGTTTGTTAACCAAAATGAATATTGATGACATTACCTATCAATGGAGGAAGATGAAGCTCACCTCTGAGGAGGAGGAGGCGGCTGATTTGAGCAGTCATTTTCCTTCCTTACTGATCATATTTGGAAATATATCCAAGGTTGAAAAGGGGAGGGGAGCTTCTGATAAGAAAGTCTCTTCTCTCATTCTTCCAAATGGTGGGTGGGATAGAAATGAGCTATATGTTGGGAAATCTGGGGAAACAGAAATAAGGAAAGGTTTGGCGAGGGTGGTGTTAGTTGCAATCAGAGAGATGTCTGGAAATGGGTTGCATCCTACATTATCATGTCTCTGTGCATGCAATCGGTTTGCACATGAACTGGCGAGGTTGGCCGTCGACAATGGTTTTTCTGGTGCGTGGATTGAAGTGGTGCCTTCTCCTCTTCCAGCGATCTGGGTGGCAGAGTCCAATGGCGTCGGGCTGTGTTAA

Protein sequence

MLEVIAVMESKETTATIEFPHLKTLSLDYVPRVRCFWSQMERIGESNLEKVETSKISNEGSFFSEEKDSLLTKMNIDDITYQWRKMKLTSEEEEAADLSSHFPSLLIIFGNISKVEKGRGASDKKVSSLILPNGGWDRNELYVGKSGETEIRKGLARVVLVAIREMSGNGLHPTLSCLCACNRFAHELARLAVDNGFSGAWIEVVPSPLPAIWVAESNGVGLC
Homology
[Close]
BLAST of Moc08g42290 vs. NCBI nr
Match: XP_022150758.1 (uncharacterized protein LOC111018819 [Momordica charantia])

HSP 1 Score: 62.4 bits (150), Expect = 5.7e-06
Identity = 38/68 (55.88%), Postives = 44/68 (64.71%), Query Frame = 0 

Query: 1   MLE--VIAVMESKETTATIEFPHLKTLSLDYVPRVRCFWSQMERIGESNLEKVETSKISN 60
           MLE  +   MESKETTATIEFPHLK+L L +V RVR F S+M++IG             N
Sbjct: 153 MLEYLITVTMESKETTATIEFPHLKSLELRFVQRVRGFCSKMDQIG-------------N 207

Query: 61  EGSFFSEE 67
           E SFFSEE
Sbjct: 213 ESSFFSEE 207

[Close]
BLAST of Moc08g42290 vs. NCBI nr
Match: XP_022150721.1 (probable disease resistance protein At4g27220 [Momordica charantia])

HSP 1 Score: 62.4 bits (150), Expect = 5.7e-06
Identity = 38/68 (55.88%), Postives = 44/68 (64.71%), Query Frame = 0 

Query: 1   MLE--VIAVMESKETTATIEFPHLKTLSLDYVPRVRCFWSQMERIGESNLEKVETSKISN 60
           MLE  +   MESKETTATIEFPHLK+L L +V RVR F S+M++IG             N
Sbjct: 492 MLEYLITVTMESKETTATIEFPHLKSLELRFVQRVRGFCSKMDQIG-------------N 546

Query: 61  EGSFFSEE 67
           E SFFSEE
Sbjct: 552 ESSFFSEE 546

[Close]
BLAST of Moc08g42290 vs. NCBI nr
Match: XP_038890457.1 (probable disease resistance protein At4g27220 isoform X2 [Benincasa hispida])

HSP 1 Score: 57.0 bits (136), Expect = 2.4e-04
Identity = 29/68 (42.65%), Postives = 50/68 (73.53%), Query Frame = 0 

Query: 1   MLEVIAVMESKETTATIEFPHLKTLSLDYVPRVRCFWSQMERIGE---SNLEKVETSKIS 60
           M++ I V+ES++ T  IEF +LK+L+L+ +PR++ F+S++E+ G+    N E+ ETS+ S
Sbjct: 873 MMKAIVVIESEKATNKIEFMNLKSLNLEGLPRLQSFFSKIEKHGQLCVDNFERDETSRCS 932

Query: 61  NEGSFFSE 66
           N  SFF++
Sbjct: 933 NHDSFFNQ 940

[Close]
BLAST of Moc08g42290 vs. NCBI nr
Match: XP_038890456.1 (probable disease resistance protein At4g27220 isoform X1 [Benincasa hispida])

HSP 1 Score: 57.0 bits (136), Expect = 2.4e-04
Identity = 29/68 (42.65%), Postives = 50/68 (73.53%), Query Frame = 0 

Query: 1   MLEVIAVMESKETTATIEFPHLKTLSLDYVPRVRCFWSQMERIGE---SNLEKVETSKIS 60
           M++ I V+ES++ T  IEF +LK+L+L+ +PR++ F+S++E+ G+    N E+ ETS+ S
Sbjct: 873 MMKAIVVIESEKATNKIEFMNLKSLNLEGLPRLQSFFSKIEKHGQLCVDNFERDETSRCS 932

Query: 61  NEGSFFSE 66
           N  SFF++
Sbjct: 933 NHDSFFNQ 940

[Close]
BLAST of Moc08g42290 vs. ExPASy TrEMBL
Match: A0A6J1DAA6 (uncharacterized protein LOC111018819 OS=Momordica charantia OX=3673 GN=LOC111018819 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 2.8e-06
Identity = 38/68 (55.88%), Postives = 44/68 (64.71%), Query Frame = 0 

Query: 1   MLE--VIAVMESKETTATIEFPHLKTLSLDYVPRVRCFWSQMERIGESNLEKVETSKISN 60
           MLE  +   MESKETTATIEFPHLK+L L +V RVR F S+M++IG             N
Sbjct: 153 MLEYLITVTMESKETTATIEFPHLKSLELRFVQRVRGFCSKMDQIG-------------N 207

Query: 61  EGSFFSEE 67
           E SFFSEE
Sbjct: 213 ESSFFSEE 207

[Close]
BLAST of Moc08g42290 vs. ExPASy TrEMBL
Match: A0A6J1DCC9 (probable disease resistance protein At4g27220 OS=Momordica charantia OX=3673 GN=LOC111018787 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 2.8e-06
Identity = 38/68 (55.88%), Postives = 44/68 (64.71%), Query Frame = 0 

Query: 1   MLE--VIAVMESKETTATIEFPHLKTLSLDYVPRVRCFWSQMERIGESNLEKVETSKISN 60
           MLE  +   MESKETTATIEFPHLK+L L +V RVR F S+M++IG             N
Sbjct: 492 MLEYLITVTMESKETTATIEFPHLKSLELRFVQRVRGFCSKMDQIG-------------N 546

Query: 61  EGSFFSEE 67
           E SFFSEE
Sbjct: 552 ESSFFSEE 546

The following BLAST results are available for this feature:
BLAST of Moc08g42290 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022150758.15.7e-0655.88uncharacterized protein LOC111018819 [Momordica charantia][more]
XP_022150721.15.7e-0655.88probable disease resistance protein At4g27220 [Momordica charantia][more]
XP_038890457.12.4e-0442.65probable disease resistance protein At4g27220 isoform X2 [Benincasa hispida][more]
XP_038890456.12.4e-0442.65probable disease resistance protein At4g27220 isoform X1 [Benincasa hispida][more]
BLAST of Moc08g42290 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc08g42290 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DAA62.8e-0655.88uncharacterized protein LOC111018819 OS=Momordica charantia OX=3673 GN=LOC111018... [more]
A0A6J1DCC92.8e-0655.88probable disease resistance protein At4g27220 OS=Momordica charantia OX=3673 GN=... [more]
BLAST of Moc08g42290 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc08g42290.1Moc08g42290.1mRNA