Moc08g41030 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc08g41030
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Locationchr8: 31480364 .. 31480627 (-)
RNA-Seq ExpressionMoc08g41030
SyntenyMoc08g41030
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGACTAAAGCGACGGACTCGAGCGCGGTCATGATGGACCAGACGAGTTCGTCGACGATCGGAAAGTTGAGCAGGCCGCGAGGCCAGCGGCGGAACCAGCCGGAACTACAGAACGACGAAAGAGCCTCCGCCAATCGGAATATCGAAGATCTGAGTGAAAATTCGGATCCCGGCCACCGGTATGCCGATCTCGACGACCTTCCCGCCATCGCCGCTGCTCCCTTCCGCCTCCTTGAAACTCTATCCAGAGCAAAGCTGTAG

mRNA sequence

ATGGAGACTAAAGCGACGGACTCGAGCGCGGTCATGATGGACCAGACGAGTTCGTCGACGATCGGAAAGTTGAGCAGGCCGCGAGGCCAGCGGCGGAACCAGCCGGAACTACAGAACGACGAAAGAGCCTCCGCCAATCGGAATATCGAAGATCTGAGTGAAAATTCGGATCCCGGCCACCGGTATGCCGATCTCGACGACCTTCCCGCCATCGCCGCTGCTCCCTTCCGCCTCCTTGAAACTCTATCCAGAGCAAAGCTGTAG

Coding sequence (CDS)

ATGGAGACTAAAGCGACGGACTCGAGCGCGGTCATGATGGACCAGACGAGTTCGTCGACGATCGGAAAGTTGAGCAGGCCGCGAGGCCAGCGGCGGAACCAGCCGGAACTACAGAACGACGAAAGAGCCTCCGCCAATCGGAATATCGAAGATCTGAGTGAAAATTCGGATCCCGGCCACCGGTATGCCGATCTCGACGACCTTCCCGCCATCGCCGCTGCTCCCTTCCGCCTCCTTGAAACTCTATCCAGAGCAAAGCTGTAG

Protein sequence

METKATDSSAVMMDQTSSSTIGKLSRPRGQRRNQPELQNDERASANRNIEDLSENSDPGHRYADLDDLPAIAAAPFRLLETLSRAKL
Homology
[Close]
BLAST of Moc08g41030 vs. NCBI nr
Match: KAA0048079.1 (hypothetical protein E6C27_scaffold385G001510 [Cucumis melo var. makuwa])

HSP 1 Score: 72.4 bits (176), Expect = 2.2e-09
Identity = 45/77 (58.44%), Postives = 55/77 (71.43%), Query Frame = 0 

Query: 1  METKATDSSAVMMDQTSSSTIGKLSRPRGQRRNQPE-----LQNDERASANRNIEDLSEN 60
          METKATDS AV+ DQ +SST+  L RPR QRRNQ E      +++ER S +RN+EDL EN
Sbjct: 1  METKATDSKAVVTDQRTSSTMEMLRRPRRQRRNQAEELQFHEKSEERRSVHRNMEDLKEN 60

Query: 61 SDPGHRYADLDDLPAIA 73
          S+   R ADL D+PAIA
Sbjct: 61 SNSVQRNADLGDVPAIA 77

[Close]
BLAST of Moc08g41030 vs. ExPASy TrEMBL
Match: A0A5A7U3P7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G001510 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 1.0e-09
Identity = 45/77 (58.44%), Postives = 55/77 (71.43%), Query Frame = 0 

Query: 1  METKATDSSAVMMDQTSSSTIGKLSRPRGQRRNQPE-----LQNDERASANRNIEDLSEN 60
          METKATDS AV+ DQ +SST+  L RPR QRRNQ E      +++ER S +RN+EDL EN
Sbjct: 1  METKATDSKAVVTDQRTSSTMEMLRRPRRQRRNQAEELQFHEKSEERRSVHRNMEDLKEN 60

Query: 61 SDPGHRYADLDDLPAIA 73
          S+   R ADL D+PAIA
Sbjct: 61 SNSVQRNADLGDVPAIA 77

The following BLAST results are available for this feature:
BLAST of Moc08g41030 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0048079.12.2e-0958.44hypothetical protein E6C27_scaffold385G001510 [Cucumis melo var. makuwa][more]
BLAST of Moc08g41030 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc08g41030 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7U3P71.0e-0958.44Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
BLAST of Moc08g41030 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..27
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 29..61
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..61

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc08g41030.1Moc08g41030.1mRNA