Moc08g40450 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc08g40450
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	tetratricopeptide repeat protein 1
Location	chr8: 31012393 .. 31021279 (+)
RNA-Seq Expression	Moc08g40450
Synteny	Moc08g40450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGAAACTGAGGACGCAGTTCCCAGTCCTCCGAAAGCCTCTGCATCGACCACAAAAACGATGGATTCAAGCGGCGGTGCTTCAACATCTAATGCGACCAAAGACCCATCCGATGGCTTCGAGACTGCCAGCGATGGGGAGCTTGGTGACAGTGGCGATGAGCGGCAAGAGCATCCTGATCAACATCCACAAGAGGAGGAGAAAATTCCCGAGCTCACCGAGGATGAGATTAAAGAGGTTTTCCCCACCTCTGAGCTTTGTTTAGTGCTGTTTTTTTGATTCGCAACAGTTTTATATTGCTTTTTGCGATCAGCATTATCGGAGTTGATGATCATGATTGAATTCTTCTTGTACCGGTATCAAATTTTTGACTCTATCTAAAGTAGTCCACGTTTTGATTTTCTGTTCCGTCGATTTTAACTTTATTTGAAGTCGCCTATTCTTTTTACCTCTTGGTAAGTAATGATGTTCAGGTTCTACATTGAAACTTTTTTATGAGAGTTGATGCATGCACATAAGATCATTTATAGTACAAATTGGAATGATTTATGTTTGTGGCGGTGCTACTTCTCCTGAATGTGAAAATGAATTACCTAATTATCGCCTTGATCATGATACCGCGGACTGTTGATTTTGTGTTTTCACAAGCGATGAGAAAAACCTGTTTAGAAATAACTTCAGTTTGTGGGGGATCAAGTGGTGGATAAAATGTGTTGGACCCCAGAGAACGGTAAATATCGTGTTACTTCGTGAATGTGTGGACCATTGGTTATTTGGTTCTTTCTTTTTTCCGGTGTAACTGTTTAGTATCTTGATTTTCCCAGTTGGTTTCAATATAAGTGGCTAAATTGCCCATGATCTACTGACATAATTCGTTAATAGCTTTATCTTAGAATATTTTAAAAAATATATATCAGAAATAGTTCTCTTCTATAGAAAAATCAATCATTTGATCATTTAAGCTGCTGAAATTTTCTTACTATCATGGTATGTTTTTTCTTTATGTGGATTTACAATTTTTTAAGCTCAGTTTTTCTTGAATCGTACGGATCTAATACTATTATTACATATCTGGCAGAAAGCCTTGGCTGAAGCAAATAGTGCAAAGTTAGCGGGCAATAAACTGTTTGGAGAAGGGAAATATGAGGAGGCTATATTAGAGTATGATCGTGCTTTGCAGATTGCTCCAGACATGCCCTCTGCAGTGGAGTTACGGTCTATATGCCATGGAAACCGTGGCGTGTGTTTTCTGAAACTAGTATGTGCTAGATCCTACATTGAAAAAGAATTGCAGTCTGTTTCCATTTTATAGACGTTATTCTCCATCCTTCTTGATGCATTACATGCATTACCATATTTTTATCATGTTTCTACAAATGTCAGTTGTCACTATAGGGTCAATAGGAGCTATTCCTACTTTTACTAACTGTCTACTTTGTTGCTTCTTCTTGGGGGTTGTGGACAAAAACATTTATAATTAATCTGATTTTTGCCAATTGGGGAGGTCTTTTGCAATCCACTTGCCCATTTTCGAGTAGAATTCTCTTTTACCCTTACCATTACAATAGGCATAGGAGAGCATTACTTATTAGTTATGTATTTAGTATTCAAAAGGGGTGAAAAACCACCCAACAAGCAAGCCAACCTATTCGGGAGGGCTGGGAACTCTCCCATACTCTATTTCCTACCAAAATAATGATATATCCAAGCACATGTCCCTCTCTGCCTGCCATATATACTGGTCCCAAAAGTTTTAACTAACTTATAGAGAATCAATTACCCTTTTTACCTTTCCTAGCATAAACATTCTTGATGGAAGCCTAACAGATTATTGGTTTGGTTTCAATATGTTAGTTTCTTATCCTTGAAAAGAAAAAAAAGATTGAAGCCACTTGAATCTTCAGAAGTCACTTGAAAATTAATGTTCTTCAACAAGTGAGGACCTTGAGGATTATTTTGATGTCTGTTCCACATCTGAAATTTTTCTTACATATTAGGCACTAAATATTATGCAATATCTTTTAACTTTTTGTCGTGTAAACTACGCGCGTTTTCAATTATGCACAAAACTGTCGTTTTTTTAACTGTTAAATAAGTTCCAAATGCAATTATACTAGTCCTTCGAGTTTGGCCTATTTTAGAGGTCGTCCAAAGGTCAATCCTCAGCCATTGTTTTTTTTAATACAACAAGTAGGGTGGAGGATTCGTACTCGTGACCTCTTGGTAAGAGAAATGTGCCAATTAGCATTGAGCTAAGCTTGTATTGGCCAATCCTCAGCCATTGTTGTGGATAGTAATAGTCAAATTCGGAAAATGACAGTTGTGCATATCAATCATGATTTATGCAATCCTCTATGTCTATGGAGAAAGTCTAGCATTTTCTGGTATTGGAAATTTTTTTTGGAGGTTGTCTTCTGAAATTACTTTGTTTGGTAAACATGATTTATGTCTGACTGCTGCCTTTTTCCATTAAGATAAATCGAAACTAGAACTTTCCTCTGAAATTTTGCTTCAATTCCACATTTTATTTCATGCCAGCAGGACAGTATGTGTTTGCATATTGTAATTAATTACATTGATGGTAAACTTTTGTAGGAAAAGTATAATGATACGATCAAGGAATGCACAAAGGCAATTGAACTGAATCCTGCATATATCAAAGCTTTGTCTAGAAGAGGAGAGGCTCATGAAAAGCTTGAAAATTTTGAGGAGGCTATTCATGGTAAACTCTGCTTTGCTTATAGTACTGTTATTATGGTCAGTCTGTATGGCAGTTGTTTTCTTTTGTTCTTTCCAGCATGTCCTTGAACTGTTAATAAGCACCCTTTCTCAATTTTTATTTACCAACACATGGGGTCATATATATTTCATTTACTTGAAGATATGAAAAAGATATTGGAATTGGATTCCTCAAATGTGCAAGCTAGAAAAGCCATTTGTCGCCTGGAACCACTGGCTGAACAAAAACGAGAAAAGATGAAGGAGGAGATGATTGGTAAGCCTTATACTGTTTTCCAATTTTCTTTTCTTTTCTTTTTTTCTTTTTTCATTCTTTTTTTTTAAAATATCATATTGATGAAGGAGGAGATGATTGGTAAGCCTTATACTGTTTTCCAATCTTCTTTTCTTTTCTTTTTTTTTTCTTTTTTCTTTCTTTTTTTTTAAATATCATATTTCATTCTTTTTTGTCTTCAGAACTCGCTTCACCTGCTATTGGAAATTTAGCCAACAAAGTTTACATTCTTAACTGAAAACTTTAAAAATAATAATTCTTTTACATTTATTTATTTAGAATGAACTAGAGGCATATTGGTGTAGTGGTATTGGGTATGGGTTTGGTGTTGAGGGACTTTGATACTCTGCCTAGTGCCTACTTAAGATATTAAGCTGAATGTTGTAAAGGTGAAGCTGACTCTAACCGTCACAGATGTAAAGAAAATACATGCCACCAGATATTTTTTGCATTCAGCATGTGTATATAGATGAGAAAATACGCTGGGCGTGGGTGCCCTTGGGTATAGGGGAGAAAAGTTCCGGCTCTCAATTATAAAAAATATATATATAGATAGATGAGCAAATATGCCTTTATTTATATATTATTATTTTTGAGATTTTCCCTTCCTCAATTTCTACCTACCCTTGTTTTAGTTTTCCCCCTGGGCCTGTTCTTTTAATGGAGAAGCTGTACATTTAGAACTTTGTGTTTTTACATCTTTAGTAGCCCTCAAGGAATCTGAAATGTTATAATTTCTGTTTGAGCAGGAAAGTTGAAAGATGTTGGCAACTCTTTGTTGGGTCGCTTTGGTATGAGCGTGGACAACTTCAAGGCTGTCAAAGATCCCAACACTGGTTCCTATTCAATTTCATTCCAGCGATAGTTTGTCTTATACTCGATTTGTCGATTTGTATTTACGTCCATCGTAAGAGAAAAGTATACGAAAAACCGATACCCGTATGAACTGGGGCATTGTTTATTCCTGGATTTAACGATTAATTATATAACTGATGGTAGTGTTTGAATTCTGGGATATGGTTTACTTCGTTTTGCAGATGGCAAATTGGTGCTGTTTTCCTGTGGATGGCACGTTATTTATTGGTTTATGCCTTGTGATTGTGGACTCTATTCATTTCTCTTCAATGACAAAGGTGTGATGCAAGCTTTCTTCTAGATTTTTTCGGTGTCTCGGGGCTGTAATTAGATACGAGTTAAATGTACTCTACTCGTAGCAGGAGATACCATCGTGACTTGACTTCGTGAGAAATGCCATCTTAAATCGTTTTTTTTAGTTTTCTATTGTTTTCCCTTTTTTCTTTTCAGTCTGTTCTACTTTAATTGGTTTTTAGTGAGCTCTTTTTTTCTTTCAAATATATATAATGTGAAATTTCGACTTGGACAAATTTTGATTATGTTTGCAAATGGAAAGAAACTAAAAATCTTGAGGGCATCTTTAAAATTTGCTAAATGATAAACCTCTCTTTTGTCAAATCGTTTAGGAAAAAAAAAATGCGAATGTTAATCCAAATATATCTCTACGGCTTCTTCCCACCTAATTTTTATAATGTAATATTCTAAAAAGAAGATAGTGATAATTTTTTTACAATTTTGAAGTATATTTCATTTGTCTATTACATCCTTTTTTTTTCACATTTCTCGTCTCATACGATGAAAAGTCCTATAGTGTGTTCGGAGAAAAGTAATTTTTAAATAAAATTTGCCAACAATCTTTTTTTTTTTTTGAAGACTTACTCGAGGGTGTGTTAAGTGATTTTAAAGTACTAAAAGTTATTTTAAAAAAATTTAAAATTTTCGGTGAAAAAGCAAAGAAGAAAAACTTAATTACTTTAAAAACCTTCTTTTTAAAAGAAAACAAGCAATCATATATATAAAATAAGGTTTTTAAAGAAAACAATCATATATATATATATAAAAGACTTACTTTAAAGTGGTTGAAACTATTATAGTTCATGGAGGTAAGATGATTATTAAAAAGCGCACAGAGAAATTATTAAATTTAAAGATACAACCTCAAATTTTGATTATATTTATTATCGAGGTAAAATATGTAATCATTAAATAATATTTATATTTATAGCATTAAGTTTAAATTTTACAAAAACATCATAATTTAAAAATTTATATAATCACGTGACAAAAGTCATTATTATGATTTAAGAAAAAAATTAAGTAACAATATTTTTATAAATATATATTTATTTTATGACCATTTATTTATTATTATTTCCCTTAAAAAAAAGGAAAAGTCTAAAATAAAATGCGAACAAATTTATCCTAAATTCTCTTTTACATCTCATGGTCTTACCAACCCCGATTTGCGCGTGAAATCAGATGCGCCATTGTTTCTCCTCCTCGCTTCATTCTGGTGCCCTGCTGCAATAGCTAACAATTTGCTTCTCCGAACCGGCAAAGCGAAGATGGCTAACCAAGGTGCGAAGAAGCGCAAGGAAGAGAATGTTCGTCACATGGCCAATCTCCGCCGCCTCATCATTGCCTGCAACGTAACGATTTCATTCAAATTTTGTTCAATTTTATATCCGTTTCATTATTGCTATTAGTAATTTAGTATTCGTGTTGATAATGAGTATACTTGTTGTAAGATTTTCTGGAGTCCAAATTCAATCGGATTTTCCTTAATTTTGACTTGGAATTCCGAGCTGGAAGCAATTTTAGGATGATGTGCTTGTTTCATTACGAAGCTTCAATCAATTGCGTCCTTGTGTTGATAATCGAGTTATACTTGTTATAGTCAAAATTTTAATCCATTTTGTTTTCTTTGCACACTTTTGAAATTTGACTTTGAATTCCGAGCTAGAGTAATTATAGAATGATGTTGATACTCGGTTGCGTCCATCCTAGACTTCGAATTCGGAGCTAAAGTAATTGTGGGATGATGCACTTGTTTCGTAAAGAAGCAACAATCGATTGCGTCCTCTGTTCGTCAGCTGAAAATTTCAATTATCAGATTGATTTTCAGTACTTTGATTTCTTAACAAAACGGATTCATACCGTAAAGTGTAAACATCCAATGGTGAAGGCAGTTTTTACTTATTTATTTATTGGGTAGAAATCTGCAAATGTATGATCTCTAGATCAGGCTGTTGTAAATTAAAGTCGAGCAGGTGTCAATGCATGCACGGGAGAAACATAGGAATGTAGGGTCTAGAGTATTCTCTTCACAGCAATATGAGATGACTCGATAACTTTAAGGATGAAGAACTAATTTAGGTTGTCTATGTTACATGCAGTACGCTTAGGGTTTATTTTTTATTTGCAAATTCTTATAAGGATTACTATTTTTTTGTGTCAAAGGGATAAGCACTCTTCTGTGAATATTCTGGAACTTCATCATGTAATTTAGTCATTTAGTTTAACTTTTTTTATTTGAACTGTAACCATCATTCATAAAGCCCAAGAGCACCGTGTTGCTTATTGGAACTGGTATGACTTCATTGTTTTGTTGTTTATTTTATGTAACTTGAGTTGTTTATGCAGGTTATCTATATCATGGTTCGGCTGCTGATTTTTCATTCAAGTTTCACTTGGAAACATTGGATTGGTCTGATTGTCACATCAGCAGCTTATTTTATTCCTTACAATCAACTTGCCAAAATGGCTAACCCAACCTACGGTGATGATGGTGAACTTCTAGATGGTGGGTTTGATATGAGTACGGGTGGAATTTGTGGGTATGTCTTCAGTCTTCTTCATGTTTATCATTAAATGTCAGTTTTGTGCATGTTTTTATCTTCTTTATATAGAGTATAATCTTTGAATACAGATCTGACTTATATAATTGTTCCGTGACCAAATCTTAAGTGAACCATAGCTCTGGAACTGGAACATGCTAAGAATTGGTATGATATTGTTAACCAAAGATCAAATCTTATTGGGGAAGCTGAAGGTATTTTCATGGTTGTCATTACAAAATTCAATACTAAATGTGAGAAATGGTAGTGATGTGCAAATTGGATTCACTGATCTCCAACTACAGTATTTTATCCTATTACAGTTCCCTCTCTGAATTAAATTTCCTTCCCTCGAGTTCATGACCCAAATTGACTTTCATTTATTGCATTGTAAATTGCTATTTAGTTTACTTGTCAATTGGATTATTGACTCTCAATAAAGACAATATACATAAATATCATGGTTGTTTGACCAGTTTCTTTACTATTATCTTTGTCTTTTCTTGCTTGAGGAAATCTCAAAATGGATATAAACATATAAGCAAGCTTGCAGGTAAAGAGGTATCAGGTTTAAATTTTTTGGGAAATGGTCCCGCTTCACTGATTGCTTTAAACAATTGATGTCAGTTAGATCATCAACATGACTTGTGTAGTCAATCCGTACTGCTATTTTTTACCTTACAAACAATTGATGTTAGTTAGATCATTAATGTGACTCGTAATTAAAGTAATTTATATGGTGATTGCTTTGGGATTTCTGGTAAAGCTACACCAGCTGTGGATCATAGATACCAGTCCTGTGAAGCCTCATGGCACTGACATTGTGTGAAAGATGCACCTGGGACAGGTGTCACTGCCATAGTGAGAGTTGAATAGGCAGAACTTGTATCGGGTTAAAATCCCATATCTCCTCTCTCTATAGTGGTTTGCATTATATCTATGTCTAGCCTTCCATCCATAACTAGTTTCTTGGTATTTCAATAATTATGTGAAACATTTTCATGGGTCATCTTGTTTTCTGCAGCTACTTGCATGACGTGATCTACATTACAAGCTTTGTGCAAATAATGTCAATTGTCTCTGGGAAGTTTTGGTATACCTACCTTGTGGTAAGTTCCATATAATTTTGAGACTGAACTTAAGACAGATTTAGTATAATATATAGCCTAGACCTCGCCATGTTATTTGGGTGTGAAATATTTGAACTTGGGGTCTTGTTCGATTCTGTCTTCATTTCTAAAGGATATAATTATTTAATGATTTCTTTATGGCTAAAAGAGGTATAAGCATCATCAGCATTATATATTTTTGGCAAAAATTGGTAGGAATTGTTGTACTGCGAGACTAGCATTTTTTTTTTAATATTATTATTATTTTTTTTATATACATGAGTCAGCTTGCGTGCAGCGAGGTTAGAACTTTCTTGAGACCAGATGACTAAAATATTGTTTCACAAAGTGCATTCGTATGGCTGCATAACTTTTCTCGACTGGATGATATATACCTCGTGCATTTGCTTAAAATTTGTATTTACTGCCATCGCTTCAAACTATTTCTATGCAGTGTTCTCGGCAATAAATACAAAAGAATCATTGCACTTGGCCTAGACTATCTGGCTAAATGCCAAATCATAATCCGTTAGTTTTTAACTGATGAATAACTAGAGTATTTGGCTGAATGACTACAAGAAGTCTCCAAATATTTTGAATCTTTCGTCAAGTTGAAAGTACTATGCCAATGATGCATCTTTCTGAAATGACTTTAATGTTACATATTTACATATATTTATAAATGTTGGTATATCTCTAAACAGGATTTTTATATTACTTATACTAATAAATGTCTGTGCATCTGACGGGAAGAATTCAAAATTATATGCTGTACGACCGACAAGTTATTTAATGCTCATTTGCTCTTTGTTTTGCAGATTCCAGCATTTGGGGCATACAAATCTTCTGGTTTTATTAGGGGACTCTTGTCGCAAGGTTCAGAGGTAATCAAACTCTACTCCAAACGTGATTTCTGAATTTAAAAATGGTCCAATCTTCTCTCTTTTCATTTTGGCGTATACCGGTGTGTCATATAGGATGTAGCTGAGGATGAGAAAACTCGCAAGAAGAGAGAAAAGATGGAGAAGAAAGCTTCAAGAGTGAAGTTTTTGAAGACCAAGAATAGATAA

mRNA sequence

ATGGAGGAAACTGAGGACGCAGTTCCCAGTCCTCCGAAAGCCTCTGCATCGACCACAAAAACGATGGATTCAAGCGGCGGTGCTTCAACATCTAATGCGACCAAAGACCCATCCGATGGCTTCGAGACTGCCAGCGATGGGGAGCTTGGTGACAGTGGCGATGAGCGGCAAGAGCATCCTGATCAACATCCACAAGAGGAGGAGAAAATTCCCGAGCTCACCGAGGATGAGATTAAAGAGAAAGCCTTGGCTGAAGCAAATAGTGCAAAGTTAGCGGGCAATAAACTGTTTGGAGAAGGGAAATATGAGGAGGCTATATTAGAGTATGATCGTGCTTTGCAGATTGCTCCAGACATGCCCTCTGCAGTGGAGTTACGGTCTATATGCCATGGAAACCGTGGCGTGTGTTTTCTGAAACTAGAAAAGTATAATGATACGATCAAGGAATGCACAAAGGCAATTGAACTGAATCCTGCATATATCAAAGCTTTGTCTAGAAGAGGAGAGGCTCATGAAAAGCTTGAAAATTTTGAGGAGGCTATTCATGATATGAAAAAGATATTGGAATTGGATTCCTCAAATGTGCAAGCTAGAAAAGCCATTTGTCGCCTGGAACCACTGGCTGAACAAAAACGAGAAAAGATGAAGGAGGAGATGATTGGAAAGTTGAAAGATGTTGGCAACTCTTTGTTGGGTCGCTTTGGTATGAGCGTGGACAACTTCAAGGCTGTCAAAGATCCCAACACTGATGGCAAATTGGTGCTGTTTTCCTGTGGATGGCACGTTATTTATTGGTTTATGCCTTGTGATTGTGGACTCTATTCATTTCTCTTCAATGACAAAGATGCGCCATTGTTTCTCCTCCTCGCTTCATTCTGGTGCCCTGCTGCAATAGCTAACAATTTGCTTCTCCGAACCGGCAAAGCGAAGATGGCTAACCAAGGTGCGAAGAAGCGCAAGGAAGAGAATGTTCGTCACATGGCCAATCTCCGCCGCCTCATCATTGCCTGCAACGTTATCTATATCATGGTTCGGCTGCTGATTTTTCATTCAAGTTTCACTTGGAAACATTGGATTGGTCTGATTGTCACATCAGCAGCTTATTTTATTCCTTACAATCAACTTGCCAAAATGGCTAACCCAACCTACGGTGATGATGGTGAACTTCTAGATGGTGGGTTTGATATGAGTACGGGTGGAATTTGTGGCTACTTGCATGACGTGATCTACATTACAAGCTTTGTGCAAATAATGTCAATTGTCTCTGGGAAGTTTTGGTATACCTACCTTGTGATTCCAGCATTTGGGGCATACAAATCTTCTGGTTTTATTAGGGGACTCTTGTCGCAAGGTTCAGAGGATGTAGCTGAGGATGAGAAAACTCGCAAGAAGAGAGAAAAGATGGAGAAGAAAGCTTCAAGAGTGAAGTTTTTGAAGACCAAGAATAGATAA

Coding sequence (CDS)

ATGGAGGAAACTGAGGACGCAGTTCCCAGTCCTCCGAAAGCCTCTGCATCGACCACAAAAACGATGGATTCAAGCGGCGGTGCTTCAACATCTAATGCGACCAAAGACCCATCCGATGGCTTCGAGACTGCCAGCGATGGGGAGCTTGGTGACAGTGGCGATGAGCGGCAAGAGCATCCTGATCAACATCCACAAGAGGAGGAGAAAATTCCCGAGCTCACCGAGGATGAGATTAAAGAGAAAGCCTTGGCTGAAGCAAATAGTGCAAAGTTAGCGGGCAATAAACTGTTTGGAGAAGGGAAATATGAGGAGGCTATATTAGAGTATGATCGTGCTTTGCAGATTGCTCCAGACATGCCCTCTGCAGTGGAGTTACGGTCTATATGCCATGGAAACCGTGGCGTGTGTTTTCTGAAACTAGAAAAGTATAATGATACGATCAAGGAATGCACAAAGGCAATTGAACTGAATCCTGCATATATCAAAGCTTTGTCTAGAAGAGGAGAGGCTCATGAAAAGCTTGAAAATTTTGAGGAGGCTATTCATGATATGAAAAAGATATTGGAATTGGATTCCTCAAATGTGCAAGCTAGAAAAGCCATTTGTCGCCTGGAACCACTGGCTGAACAAAAACGAGAAAAGATGAAGGAGGAGATGATTGGAAAGTTGAAAGATGTTGGCAACTCTTTGTTGGGTCGCTTTGGTATGAGCGTGGACAACTTCAAGGCTGTCAAAGATCCCAACACTGATGGCAAATTGGTGCTGTTTTCCTGTGGATGGCACGTTATTTATTGGTTTATGCCTTGTGATTGTGGACTCTATTCATTTCTCTTCAATGACAAAGATGCGCCATTGTTTCTCCTCCTCGCTTCATTCTGGTGCCCTGCTGCAATAGCTAACAATTTGCTTCTCCGAACCGGCAAAGCGAAGATGGCTAACCAAGGTGCGAAGAAGCGCAAGGAAGAGAATGTTCGTCACATGGCCAATCTCCGCCGCCTCATCATTGCCTGCAACGTTATCTATATCATGGTTCGGCTGCTGATTTTTCATTCAAGTTTCACTTGGAAACATTGGATTGGTCTGATTGTCACATCAGCAGCTTATTTTATTCCTTACAATCAACTTGCCAAAATGGCTAACCCAACCTACGGTGATGATGGTGAACTTCTAGATGGTGGGTTTGATATGAGTACGGGTGGAATTTGTGGCTACTTGCATGACGTGATCTACATTACAAGCTTTGTGCAAATAATGTCAATTGTCTCTGGGAAGTTTTGGTATACCTACCTTGTGATTCCAGCATTTGGGGCATACAAATCTTCTGGTTTTATTAGGGGACTCTTGTCGCAAGGTTCAGAGGATGTAGCTGAGGATGAGAAAACTCGCAAGAAGAGAGAAAAGATGGAGAAGAAAGCTTCAAGAGTGAAGTTTTTGAAGACCAAGAATAGATAA

Protein sequence

MEETEDAVPSPPKASASTTKTMDSSGGASTSNATKDPSDGFETASDGELGDSGDERQEHPDQHPQEEEKIPELTEDEIKEKALAEANSAKLAGNKLFGEGKYEEAILEYDRALQIAPDMPSAVELRSICHGNRGVCFLKLEKYNDTIKECTKAIELNPAYIKALSRRGEAHEKLENFEEAIHDMKKILELDSSNVQARKAICRLEPLAEQKREKMKEEMIGKLKDVGNSLLGRFGMSVDNFKAVKDPNTDGKLVLFSCGWHVIYWFMPCDCGLYSFLFNDKDAPLFLLLASFWCPAAIANNLLLRTGKAKMANQGAKKRKEENVRHMANLRRLIIACNVIYIMVRLLIFHSSFTWKHWIGLIVTSAAYFIPYNQLAKMANPTYGDDGELLDGGFDMSTGGICGYLHDVIYITSFVQIMSIVSGKFWYTYLVIPAFGAYKSSGFIRGLLSQGSEDVAEDEKTRKKREKMEKKASRVKFLKTKNR

Homology

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BLAST of Moc08g40450 vs. NCBI nr
Match: XP_022153385.1 (tetratricopeptide repeat protein 1 [Momordica charantia])

HSP 1 Score: 478.0 bits (1229), Expect = 9.5e-131
Identity = 250/256 (97.66%), Postives = 251/256 (98.05%), Query Frame = 0


Query: 1   MEETEDAVPSPPKASASTTKTMDSSGGASTSNATKDPSDGFETASDGELGDSGDERQEHP 60
           MEETEDAVPSPPKASASTTKTMDSSGGASTSNATKDPSDGFETASDGELGDSGDERQEHP
Sbjct: 6   MEETEDAVPSPPKASASTTKTMDSSGGASTSNATKDPSDGFETASDGELGDSGDERQEHP 65

Query: 61  DQHPQEEEKIPELTEDEIKEKALAEANSAKLAGNKLFGEGKYEEAILEYDRALQIAPDMP 120
           DQHPQEEEKIPELTEDEIKEKALAEANSAKLAGNKLFGEGKYEEAILEYDRALQIAPDMP
Sbjct: 66  DQHPQEEEKIPELTEDEIKEKALAEANSAKLAGNKLFGEGKYEEAILEYDRALQIAPDMP 125

Query: 121 SAVELRSICHGNRGVCFLKLEKYNDTIKECTKAIELNPAYIKALSRRGEAHEKLENFEEA 180
           SAVELRSICHGNRGVCFLKLEKYNDTIKECTKAIELNPAYIKALSRRGEAHEKLENFEEA
Sbjct: 126 SAVELRSICHGNRGVCFLKLEKYNDTIKECTKAIELNPAYIKALSRRGEAHEKLENFEEA 185

Query: 181 IHDMKKILELDSSNVQARKAICRLEPLAEQKREKMKEEMIGKLKDVGNSLLGRFGMSVDN 240
           IHDMKKILELDSSNVQARKAICRLEPLAEQKREKMKEEMIGKLKDVGNSLLGRFGMSVDN
Sbjct: 186 IHDMKKILELDSSNVQARKAICRLEPLAEQKREKMKEEMIGKLKDVGNSLLGRFGMSVDN 245

Query: 241 FKAVKDPNTDGKLVLF 257
           FKAVKDPNT    + F
Sbjct: 246 FKAVKDPNTGSYSISF 261

[Close]

BLAST of Moc08g40450 vs. NCBI nr
Match: XP_023522143.1 (tetratricopeptide repeat protein 1-like [Cucurbita pepo subsp. pepo] >XP_023547337.1 tetratricopeptide repeat protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 418.3 bits (1074), Expect = 8.9e-113
Identity = 217/256 (84.77%), Postives = 238/256 (92.97%), Query Frame = 0


Query: 1   MEETEDAVPSPPKASASTTKTMDSSGGASTSNATKDPSDGFETASDGELGDSGDERQEHP 60
           MEE+ED VPSPPKASAST KTMDSSG  STS+A+K+PSDG+ETASDGELGDSGDE Q+HP
Sbjct: 6   MEESEDEVPSPPKASASTQKTMDSSGVPSTSSASKEPSDGYETASDGELGDSGDENQQHP 65

Query: 61  DQHPQEEEKIPELTEDEIKEKALAEANSAKLAGNKLFGEGKYEEAILEYDRALQIAPDMP 120
           +QHP+ EE+I  L+EDEIKEKALAEAN+AKLAGNKLFGEGKYEEAI+EYDRAL IAPDMP
Sbjct: 66  EQHPEHEEQIAALSEDEIKEKALAEANNAKLAGNKLFGEGKYEEAIMEYDRALNIAPDMP 125

Query: 121 SAVELRSICHGNRGVCFLKLEKYNDTIKECTKAIELNPAYIKALSRRGEAHEKLENFEEA 180
           SAVELRSICH NRGVCFLKLEKY++TIK C+KAIE+NPAY+KALSRRGEAHEKLE+FEEA
Sbjct: 126 SAVELRSICHANRGVCFLKLEKYDETIKACSKAIEINPAYVKALSRRGEAHEKLEHFEEA 185

Query: 181 IHDMKKILELDSSNVQARKAICRLEPLAEQKREKMKEEMIGKLKDVGNSLLGRFGMSVDN 240
           IHDMKKILELDSSN QA+KAI RLEPLAEQKREKMKEEMIGKLKD+GNSLLGRFGMSVDN
Sbjct: 186 IHDMKKILELDSSNDQAKKAIRRLEPLAEQKREKMKEEMIGKLKDMGNSLLGRFGMSVDN 245

Query: 241 FKAVKDPNTDGKLVLF 257
           FKAVKDPNT    + F
Sbjct: 246 FKAVKDPNTGSYSISF 261

[Close]

BLAST of Moc08g40450 vs. NCBI nr
Match: KAG7030071.1 (Tetratricopeptide repeat protein 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 414.8 bits (1065), Expect = 9.9e-112
Identity = 214/256 (83.59%), Postives = 237/256 (92.58%), Query Frame = 0


Query: 1   MEETEDAVPSPPKASASTTKTMDSSGGASTSNATKDPSDGFETASDGELGDSGDERQEHP 60
           MEE+ED VPSPPKASAST KT DSSGG ST++A+K+PSDG+ETASDGELGDSGDE Q+HP
Sbjct: 6   MEESEDEVPSPPKASASTQKTTDSSGGPSTASASKEPSDGYETASDGELGDSGDENQQHP 65

Query: 61  DQHPQEEEKIPELTEDEIKEKALAEANSAKLAGNKLFGEGKYEEAILEYDRALQIAPDMP 120
           +QHP+ EE+I  L+EDEIKEKALAEAN+AKLAGNKLFGEGKYEEAI+EYDRAL I+PDMP
Sbjct: 66  EQHPKHEEQIAALSEDEIKEKALAEANNAKLAGNKLFGEGKYEEAIVEYDRALNISPDMP 125

Query: 121 SAVELRSICHGNRGVCFLKLEKYNDTIKECTKAIELNPAYIKALSRRGEAHEKLENFEEA 180
           SA ELRSICH NRGVCFLKLEKY++TIK C+KAIE+NPAY+KALSRRGEAHEKLE+FEEA
Sbjct: 126 SAAELRSICHANRGVCFLKLEKYDETIKACSKAIEINPAYVKALSRRGEAHEKLEHFEEA 185

Query: 181 IHDMKKILELDSSNVQARKAICRLEPLAEQKREKMKEEMIGKLKDVGNSLLGRFGMSVDN 240
           IHDMKKILELDSSN QA+KAI RLEPLAEQKREKMKEEMIGKLKD+GNSLLGRFGMSVDN
Sbjct: 186 IHDMKKILELDSSNDQAKKAIRRLEPLAEQKREKMKEEMIGKLKDMGNSLLGRFGMSVDN 245

Query: 241 FKAVKDPNTDGKLVLF 257
           FKAVKDPNT    + F
Sbjct: 246 FKAVKDPNTGSYSISF 261

[Close]

BLAST of Moc08g40450 vs. NCBI nr
Match: KAG6599130.1 (Tetratricopeptide repeat protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 414.8 bits (1065), Expect = 9.9e-112
Identity = 214/256 (83.59%), Postives = 237/256 (92.58%), Query Frame = 0


Query: 1   MEETEDAVPSPPKASASTTKTMDSSGGASTSNATKDPSDGFETASDGELGDSGDERQEHP 60
           MEE+ED VPSPPKASAST KT DSSGG ST++A+K+PSDG+ETASDGELGDSGDE Q+HP
Sbjct: 1   MEESEDEVPSPPKASASTQKTTDSSGGPSTASASKEPSDGYETASDGELGDSGDENQQHP 60

Query: 61  DQHPQEEEKIPELTEDEIKEKALAEANSAKLAGNKLFGEGKYEEAILEYDRALQIAPDMP 120
           +QHP+ EE+I  L+EDEIKEKALAEAN+AKLAGNKLFGEGKYEEAI+EYDRAL I+PDMP
Sbjct: 61  EQHPKHEEQIAALSEDEIKEKALAEANNAKLAGNKLFGEGKYEEAIVEYDRALNISPDMP 120

Query: 121 SAVELRSICHGNRGVCFLKLEKYNDTIKECTKAIELNPAYIKALSRRGEAHEKLENFEEA 180
           SA ELRSICH NRGVCFLKLEKY++TIK C+KAIE+NPAY+KALSRRGEAHEKLE+FEEA
Sbjct: 121 SAAELRSICHANRGVCFLKLEKYDETIKACSKAIEINPAYVKALSRRGEAHEKLEHFEEA 180

Query: 181 IHDMKKILELDSSNVQARKAICRLEPLAEQKREKMKEEMIGKLKDVGNSLLGRFGMSVDN 240
           IHDMKKILELDSSN QA+KAI RLEPLAEQKREKMKEEMIGKLKD+GNSLLGRFGMSVDN
Sbjct: 181 IHDMKKILELDSSNDQAKKAIRRLEPLAEQKREKMKEEMIGKLKDMGNSLLGRFGMSVDN 240

Query: 241 FKAVKDPNTDGKLVLF 257
           FKAVKDPNT    + F
Sbjct: 241 FKAVKDPNTGSYSISF 256

[Close]

BLAST of Moc08g40450 vs. NCBI nr
Match: XP_022999753.1 (tetratricopeptide repeat protein 1 [Cucurbita maxima])

HSP 1 Score: 412.5 bits (1059), Expect = 4.9e-111
Identity = 214/256 (83.59%), Postives = 236/256 (92.19%), Query Frame = 0


Query: 1   MEETEDAVPSPPKASASTTKTMDSSGGASTSNATKDPSDGFETASDGELGDSGDERQEHP 60
           MEE+ED VPSPPKASAST KT DSSG  STS+A+++PSDG+ETASDGELGDSGDE Q+HP
Sbjct: 6   MEESEDEVPSPPKASASTQKTTDSSGVPSTSSASQEPSDGYETASDGELGDSGDENQQHP 65

Query: 61  DQHPQEEEKIPELTEDEIKEKALAEANSAKLAGNKLFGEGKYEEAILEYDRALQIAPDMP 120
           +QHP+ EE+I  L+EDEIKEKALAEAN+AKLAGNKLFGEGKYEEAI+EYDRAL IAPDMP
Sbjct: 66  EQHPEHEEQIAALSEDEIKEKALAEANNAKLAGNKLFGEGKYEEAIVEYDRALNIAPDMP 125

Query: 121 SAVELRSICHGNRGVCFLKLEKYNDTIKECTKAIELNPAYIKALSRRGEAHEKLENFEEA 180
           SA ELRSICH NRGVCFLKLEKY++TIK C+KAIE+NPAY+KALSRRGEAHEKLE+FEEA
Sbjct: 126 SAAELRSICHANRGVCFLKLEKYDETIKACSKAIEINPAYVKALSRRGEAHEKLEHFEEA 185

Query: 181 IHDMKKILELDSSNVQARKAICRLEPLAEQKREKMKEEMIGKLKDVGNSLLGRFGMSVDN 240
           IHDMKKILELDSSN QA+KAI RLEPLAEQKREKMKEEMIGKLKD+GNSLLGRFGMSVDN
Sbjct: 186 IHDMKKILELDSSNDQAKKAIRRLEPLAEQKREKMKEEMIGKLKDMGNSLLGRFGMSVDN 245

Query: 241 FKAVKDPNTDGKLVLF 257
           FKAVKDPNT    + F
Sbjct: 246 FKAVKDPNTGSYSISF 261

[Close]

BLAST of Moc08g40450 vs. ExPASy Swiss-Prot
Match: Q3ZBR5 (Tetratricopeptide repeat protein 1 OS=Bos taurus OX=9913 GN=TTC1 PE=2 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 8.0e-32
Identity = 93/226 (41.15%), Postives = 130/226 (57.52%), Query Frame = 0


Query: 36  DPSDGFETASDGELGDSGDERQEHPDQHPQE--EEKIPELTE---DEIKEKALAEANSAK 95
           D S  FET    E G    E +   D +P E  EE + EL +   DE K++   E++  K
Sbjct: 64  DASASFETE---EPGADKLENKPEDDMNPSELDEEYLMELEKNMPDEEKKRRREESSRLK 123

Query: 96  LAGNKLFGEGKYEEAILEYDRALQIAPDMPSAVELRSICHGNRGVCFLKLEKYNDTIKEC 155
             GN+ F +G Y EA   Y RALQ  P      + RS+   NR    +K EK    I +C
Sbjct: 124 EEGNEQFKKGDYIEAESSYTRALQTCPS--CFQKDRSVLFSNRAAARMKQEKKEMAISDC 183

Query: 156 TKAIELNPAYIKALSRRGEAHEKLENFEEAIHDMKKILELDSSNVQARKAICRLEPLAEQ 215
           +KAI+LNP+YI+A+ RR E +EK +  +EA+ D K ILE D S  QAR+A  RL    E+
Sbjct: 184 SKAIQLNPSYIRAILRRAELYEKTDKLDEALEDYKSILEKDPSVHQAREACMRLPKQIEE 243

Query: 216 KREKMKEEMIGKLKDVGNSLLGRFGMSVDNFKAVKDPNTDGKLVLF 257
           + E++KEEM+GKLKD+GN +L  FG+S +NF+  +D +T    + F
Sbjct: 244 RNERLKEEMLGKLKDLGNLVLRPFGLSTENFQIKQDSSTGSYSINF 284

[Close]

BLAST of Moc08g40450 vs. ExPASy Swiss-Prot
Match: Q91Z38 (Tetratricopeptide repeat protein 1 OS=Mus musculus OX=10090 GN=Ttc1 PE=1 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 1.4e-28
Identity = 85/226 (37.61%), Postives = 125/226 (55.31%), Query Frame = 0


Query: 31  SNATKDPSDGFETASDGELGDSGDERQEHPDQHPQEEEKIPELTEDEIKEKALAEANSAK 90
           S + ++   G   A      DS  E  E  +   + E+ +PE    E K+K   E+   K
Sbjct: 67  SASFEEEQPGAHVAGSKASDDSSSELDE--EYLIELEKNMPE----EEKQKRREESAKLK 126

Query: 91  LAGNKLFGEGKYEEAILEYDRALQIAPDMPSAVELRSICHGNRGVCFLKLEKYNDTIKEC 150
             GN+ F  G Y EA   Y +ALQ+ P      + RS+   NR    +K +K    I +C
Sbjct: 127 EEGNERFKRGDYMEAESSYSQALQMCP--ACFQKDRSVLFSNRAAARMKQDKKETAITDC 186

Query: 151 TKAIELNPAYIKALSRRGEAHEKLENFEEAIHDMKKILELDSSNVQARKAICRLEPLAEQ 210
           +KAI+LNP YI+A+ RR E +EK +  +EA+ D K +LE D S  QAR+A  RL    E+
Sbjct: 187 SKAIQLNPTYIRAILRRAELYEKTDKLDEALEDYKSVLEKDPSVHQAREACMRLPKQIEE 246

Query: 211 KREKMKEEMIGKLKDVGNSLLGRFGMSVDNFKAVKDPNTDGKLVLF 257
           + E++KEEM+GKLKD+GN +L  FG+S +NF+  +D +T    + F
Sbjct: 247 RNERLKEEMLGKLKDLGNLVLRPFGLSTENFQIKQDSSTGSYSINF 284

[Close]

BLAST of Moc08g40450 vs. ExPASy Swiss-Prot
Match: Q99614 (Tetratricopeptide repeat protein 1 OS=Homo sapiens OX=9606 GN=TTC1 PE=1 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.9e-28
Identity = 91/254 (35.83%), Postives = 135/254 (53.15%), Query Frame = 0


Query: 8   VPSPPKASASTTKTMDSSGGASTSNATKDPSDGFETASDGELGDSGDERQEHPDQHPQE- 67
           VP P    + +    D           ++       + + E G    E + + D +  E 
Sbjct: 33  VPDPKNQHSQSKLLRDDEAHLQEDQGEEECFHDCSASFEEEPGADKVENKSNEDVNSSEL 92

Query: 68  -EEKIPELTE---DEIKEKALAEANSAKLAGNKLFGEGKYEEAILEYDRALQIAPDMPSA 127
            EE + EL +   DE K+K   E+   K  GN+ F +G Y EA   Y RAL++ P     
Sbjct: 93  DEEYLIELEKNMSDEEKQKRREESTRLKEEGNEQFKKGDYIEAESSYSRALEMCPS--CF 152

Query: 128 VELRSICHGNRGVCFLKLEKYNDTIKECTKAIELNPAYIKALSRRGEAHEKLENFEEAIH 187
            + RSI   NR    +K +K    I +C+KAI+LNP+YI+A+ RR E +EK +  +EA+ 
Sbjct: 153 QKERSILFSNRAAARMKQDKKEMAINDCSKAIQLNPSYIRAILRRAELYEKTDKLDEALE 212

Query: 188 DMKKILELDSSNVQARKAICRLEPLAEQKREKMKEEMIGKLKDVGNSLLGRFGMSVDNFK 247
           D K ILE D S  QAR+A  RL    E++ E++KEEM+GKLKD+GN +L  FG+S +NF+
Sbjct: 213 DYKSILEKDPSIHQAREACMRLPKQIEERNERLKEEMLGKLKDLGNLVLRPFGLSTENFQ 272

Query: 248 AVKDPNTDGKLVLF 257
             +D +T    + F
Sbjct: 273 IKQDSSTGSYSINF 284

[Close]

BLAST of Moc08g40450 vs. ExPASy Swiss-Prot
Match: Q54UB0 (Transmembrane protein 208 homolog OS=Dictyostelium discoideum OX=44689 GN=tmem208 PE=3 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 4.6e-19
Identity = 61/173 (35.26%), Postives = 95/173 (54.91%), Query Frame = 0


Query: 311 MANQGAKKRKEENVRHMANLRRLIIACNVIYIMVRLLIFHSSFTWKHWIGLIVTSAAYFI 370
           MAN GAKKRK +N + +  +R ++ A  + YI+ R++    +F    W   +  +A    
Sbjct: 1   MANSGAKKRKTQNEKELFKVRLIMAAGTIPYILYRVVYHSETFGGWLWFAYLSLNALNMF 60

Query: 371 PYNQLAKMANPTYGDDGELLDGGFDMSTGGICGYLHDVIYITSFVQIMSIVSGKFWYTYL 430
            Y  +  M   TY ++GEL+DGG D++ GG+  Y  D+IY+   +Q + ++S K  Y  L
Sbjct: 61  AYYIITSMCKLTYDNNGELIDGGSDLNQGGMTEYYFDIIYVCCIIQGLGLISDKCLYLIL 120

Query: 431 VIPAFGAYKSSGFIRG--LLSQGSEDVAEDEKTRKKREKMEKK--ASRVKFLK 480
           VIPAF  +K      G  L S+  +     E+  K+REKMEKK    +VK++K
Sbjct: 121 VIPAFAIFKIWKTFIGPYLASRNQQQQQPQEEKSKRREKMEKKQEKQKVKYVK 173

[Close]

BLAST of Moc08g40450 vs. ExPASy Swiss-Prot
Match: Q6NYP0 (Transmembrane protein 208 OS=Danio rerio OX=7955 GN=tmem208 PE=2 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 2.3e-18
Identity = 60/170 (35.29%), Postives = 95/170 (55.88%), Query Frame = 0


Query: 308 KAKMANQGAKKRKEENVRHMANLRRLIIACNVIYIMVRLLIFHSSFTWKHWIGLIVTSAA 367
           K K+  +G K+  EEN   +    R+I+  N IYI V LL+F++S ++  W  L+   A 
Sbjct: 4   KGKVGTKGKKQIHEENQDTLKFYSRIILGANAIYIAVNLLLFYNSSSFWTWFSLMFAVAV 63

Query: 368 YFIPYNQLAKMANPTYGDDGELLDGGFDMS-TGGICGYLHDVIYITSFVQIMSIVSGKFW 427
           Y   Y  ++ MA P + +DG LLDGG D++   G+  +L DVI +T+ VQ++S +S  FW
Sbjct: 64  YVGSYRSMSAMAKPAFAEDGSLLDGGIDLNMEQGMAEHLKDVILLTAIVQVLSTLSSYFW 123

Query: 428 YTYLVIPAFGAYKS-SGFIRGLLSQGSEDVAED-EKTRKKREKMEKKASR 475
           Y +L+ PA   +     F+    S  S+   E+ EK  KK+ + E++  R
Sbjct: 124 YLWLLAPARALHLLWVNFLGPWFSADSQAAPEENEKNDKKQRRQERRQMR 173

[Close]

BLAST of Moc08g40450 vs. ExPASy TrEMBL
Match: A0A6J1DGP0 (tetratricopeptide repeat protein 1 OS=Momordica charantia OX=3673 GN=LOC111020892 PE=4 SV=1)

HSP 1 Score: 478.0 bits (1229), Expect = 4.6e-131
Identity = 250/256 (97.66%), Postives = 251/256 (98.05%), Query Frame = 0


Query: 1   MEETEDAVPSPPKASASTTKTMDSSGGASTSNATKDPSDGFETASDGELGDSGDERQEHP 60
           MEETEDAVPSPPKASASTTKTMDSSGGASTSNATKDPSDGFETASDGELGDSGDERQEHP
Sbjct: 6   MEETEDAVPSPPKASASTTKTMDSSGGASTSNATKDPSDGFETASDGELGDSGDERQEHP 65

Query: 61  DQHPQEEEKIPELTEDEIKEKALAEANSAKLAGNKLFGEGKYEEAILEYDRALQIAPDMP 120
           DQHPQEEEKIPELTEDEIKEKALAEANSAKLAGNKLFGEGKYEEAILEYDRALQIAPDMP
Sbjct: 66  DQHPQEEEKIPELTEDEIKEKALAEANSAKLAGNKLFGEGKYEEAILEYDRALQIAPDMP 125

Query: 121 SAVELRSICHGNRGVCFLKLEKYNDTIKECTKAIELNPAYIKALSRRGEAHEKLENFEEA 180
           SAVELRSICHGNRGVCFLKLEKYNDTIKECTKAIELNPAYIKALSRRGEAHEKLENFEEA
Sbjct: 126 SAVELRSICHGNRGVCFLKLEKYNDTIKECTKAIELNPAYIKALSRRGEAHEKLENFEEA 185

Query: 181 IHDMKKILELDSSNVQARKAICRLEPLAEQKREKMKEEMIGKLKDVGNSLLGRFGMSVDN 240
           IHDMKKILELDSSNVQARKAICRLEPLAEQKREKMKEEMIGKLKDVGNSLLGRFGMSVDN
Sbjct: 186 IHDMKKILELDSSNVQARKAICRLEPLAEQKREKMKEEMIGKLKDVGNSLLGRFGMSVDN 245

Query: 241 FKAVKDPNTDGKLVLF 257
           FKAVKDPNT    + F
Sbjct: 246 FKAVKDPNTGSYSISF 261

[Close]

BLAST of Moc08g40450 vs. ExPASy TrEMBL
Match: A0A6J1KKL8 (tetratricopeptide repeat protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111494007 PE=4 SV=1)

HSP 1 Score: 412.5 bits (1059), Expect = 2.4e-111
Identity = 214/256 (83.59%), Postives = 236/256 (92.19%), Query Frame = 0


Query: 1   MEETEDAVPSPPKASASTTKTMDSSGGASTSNATKDPSDGFETASDGELGDSGDERQEHP 60
           MEE+ED VPSPPKASAST KT DSSG  STS+A+++PSDG+ETASDGELGDSGDE Q+HP
Sbjct: 6   MEESEDEVPSPPKASASTQKTTDSSGVPSTSSASQEPSDGYETASDGELGDSGDENQQHP 65

Query: 61  DQHPQEEEKIPELTEDEIKEKALAEANSAKLAGNKLFGEGKYEEAILEYDRALQIAPDMP 120
           +QHP+ EE+I  L+EDEIKEKALAEAN+AKLAGNKLFGEGKYEEAI+EYDRAL IAPDMP
Sbjct: 66  EQHPEHEEQIAALSEDEIKEKALAEANNAKLAGNKLFGEGKYEEAIVEYDRALNIAPDMP 125

Query: 121 SAVELRSICHGNRGVCFLKLEKYNDTIKECTKAIELNPAYIKALSRRGEAHEKLENFEEA 180
           SA ELRSICH NRGVCFLKLEKY++TIK C+KAIE+NPAY+KALSRRGEAHEKLE+FEEA
Sbjct: 126 SAAELRSICHANRGVCFLKLEKYDETIKACSKAIEINPAYVKALSRRGEAHEKLEHFEEA 185

Query: 181 IHDMKKILELDSSNVQARKAICRLEPLAEQKREKMKEEMIGKLKDVGNSLLGRFGMSVDN 240
           IHDMKKILELDSSN QA+KAI RLEPLAEQKREKMKEEMIGKLKD+GNSLLGRFGMSVDN
Sbjct: 186 IHDMKKILELDSSNDQAKKAIRRLEPLAEQKREKMKEEMIGKLKDMGNSLLGRFGMSVDN 245

Query: 241 FKAVKDPNTDGKLVLF 257
           FKAVKDPNT    + F
Sbjct: 246 FKAVKDPNTGSYSISF 261

[Close]

BLAST of Moc08g40450 vs. ExPASy TrEMBL
Match: A0A6J1G423 (tetratricopeptide repeat protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111450555 PE=4 SV=1)

HSP 1 Score: 412.1 bits (1058), Expect = 3.1e-111
Identity = 214/256 (83.59%), Postives = 235/256 (91.80%), Query Frame = 0


Query: 1   MEETEDAVPSPPKASASTTKTMDSSGGASTSNATKDPSDGFETASDGELGDSGDERQEHP 60
           MEE+ED VPSPPKASAST KT DSSG  STS+A+K+PSDG+ETASDGELGDSGDE Q+HP
Sbjct: 6   MEESEDEVPSPPKASASTQKTTDSSGVPSTSSASKEPSDGYETASDGELGDSGDENQQHP 65

Query: 61  DQHPQEEEKIPELTEDEIKEKALAEANSAKLAGNKLFGEGKYEEAILEYDRALQIAPDMP 120
           +QHP+ EE+I  L+EDEIKEKALAEAN+AKLAGNKLFGEGKYEEAI+EYDRAL IAPDMP
Sbjct: 66  EQHPEHEEQIAALSEDEIKEKALAEANNAKLAGNKLFGEGKYEEAIVEYDRALNIAPDMP 125

Query: 121 SAVELRSICHGNRGVCFLKLEKYNDTIKECTKAIELNPAYIKALSRRGEAHEKLENFEEA 180
           SA ELRSICH NRGVCFLKLEKY++TIK C+KAIE+NPAY+KALSRRGEAHE LE+FEEA
Sbjct: 126 SAAELRSICHANRGVCFLKLEKYDETIKACSKAIEINPAYVKALSRRGEAHENLEHFEEA 185

Query: 181 IHDMKKILELDSSNVQARKAICRLEPLAEQKREKMKEEMIGKLKDVGNSLLGRFGMSVDN 240
           IHDMKKILELDSSN QA+KAI RLEPLAEQKREKMKEEMIGKLKD+GNSLLGRFGMSVDN
Sbjct: 186 IHDMKKILELDSSNDQAKKAIRRLEPLAEQKREKMKEEMIGKLKDMGNSLLGRFGMSVDN 245

Query: 241 FKAVKDPNTDGKLVLF 257
           FKAVKDPNT    + F
Sbjct: 246 FKAVKDPNTGSYSISF 261

[Close]

BLAST of Moc08g40450 vs. ExPASy TrEMBL
Match: A0A6J1FAT2 (tetratricopeptide repeat protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111443960 PE=4 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 3.9e-106
Identity = 208/256 (81.25%), Postives = 227/256 (88.67%), Query Frame = 0


Query: 1   MEETEDAVPSPPKASASTTKTMDSSGGASTSNATKDPSDGFETASDGELGDSGDERQEHP 60
           MEETED VPSPPKASAS     DSSGGASTSN +KDPSDG+ETASDGELGDSGDERQEH 
Sbjct: 6   MEETEDEVPSPPKASASNKNATDSSGGASTSNVSKDPSDGYETASDGELGDSGDERQEHT 65

Query: 61  DQHPQEEEKIPELTEDEIKEKALAEANSAKLAGNKLFGEGKYEEAILEYDRALQIAPDMP 120
           DQH ++E +I   +EDEIKEKALAEAN AK+AGNKLFGEGKYEEA+LEYDRAL I+PDMP
Sbjct: 66  DQHSEQEAQIATPSEDEIKEKALAEANIAKMAGNKLFGEGKYEEALLEYDRALTISPDMP 125

Query: 121 SAVELRSICHGNRGVCFLKLEKYNDTIKECTKAIELNPAYIKALSRRGEAHEKLENFEEA 180
           SAVELRSIC  NRG CFLK EKY+DT+K C+KAIELNPAY+KALSRR EA EKLE+FEEA
Sbjct: 126 SAVELRSICQANRGACFLKQEKYDDTVKACSKAIELNPAYVKALSRRAEAREKLEHFEEA 185

Query: 181 IHDMKKILELDSSNVQARKAICRLEPLAEQKREKMKEEMIGKLKDVGNSLLGRFGMSVDN 240
           I+DMKKILELDSSN QA+KAI RLEPLAEQKREKMKEEMIGKLK++GNSLLGRFGMSVDN
Sbjct: 186 INDMKKILELDSSNDQAKKAIRRLEPLAEQKREKMKEEMIGKLKEMGNSLLGRFGMSVDN 245

Query: 241 FKAVKDPNTDGKLVLF 257
           FKAVKDPNT    + F
Sbjct: 246 FKAVKDPNTGSYSISF 261

[Close]

BLAST of Moc08g40450 vs. ExPASy TrEMBL
Match: A0A0A0LJ51 (TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G036720 PE=4 SV=1)

HSP 1 Score: 391.0 bits (1003), Expect = 7.4e-105
Identity = 207/256 (80.86%), Postives = 227/256 (88.67%), Query Frame = 0


Query: 1   MEETEDAVPSPPKASASTTKTMDSSGGASTSNATKDPSDGFETASDGELGDSGDERQEHP 60
           MEE  D VPSPPK S+S   T DSS   STSNA+K+PSDG+ETASDGELGDS DE QE+P
Sbjct: 6   MEEPHDEVPSPPKPSSSVKTTTDSSSVPSTSNASKNPSDGYETASDGELGDSADECQENP 65

Query: 61  DQHPQEEEKIPELTEDEIKEKALAEANSAKLAGNKLFGEGKYEEAILEYDRALQIAPDMP 120
           DQH ++EE+I  L+EDEIKEKALAEAN+AKLAGNKLFGEGKYEEAI EYDRAL IAPD+P
Sbjct: 66  DQHSEQEERIATLSEDEIKEKALAEANNAKLAGNKLFGEGKYEEAISEYDRALNIAPDVP 125

Query: 121 SAVELRSICHGNRGVCFLKLEKYNDTIKECTKAIELNPAYIKALSRRGEAHEKLENFEEA 180
           +AVEL+SICH NRGVCFLKLEKY DTIK C+KAIELNPAY+KALSRRGEAHEKLE+FEEA
Sbjct: 126 AAVELQSICHANRGVCFLKLEKYADTIKACSKAIELNPAYVKALSRRGEAHEKLEHFEEA 185

Query: 181 IHDMKKILELDSSNVQARKAICRLEPLAEQKREKMKEEMIGKLKDVGNSLLGRFGMSVDN 240
           I+DMKKILELDSSN QA+K I RLEPLAEQKREKMKEEMIGKLKD+GNSLLGRFGMSVDN
Sbjct: 186 INDMKKILELDSSNDQAKKTIRRLEPLAEQKREKMKEEMIGKLKDMGNSLLGRFGMSVDN 245

Query: 241 FKAVKDPNTDGKLVLF 257
           FKAVKDPNT    + F
Sbjct: 246 FKAVKDPNTGSYSISF 261

[Close]

BLAST of Moc08g40450 vs. TAIR 10
Match: AT2G23940.1 (Protein of unknown function (DUF788) )

HSP 1 Score: 260.0 bits (663), Expect = 3.8e-69
Identity = 127/173 (73.41%), Postives = 149/173 (86.13%), Query Frame = 0


Query: 311 MANQGAKKRKEENVRHMANLRRLIIACNVIYIMVRLLIFHSSFTWKHWIGLIVTSAAYFI 370
           MANQGAKKRKEEN +HMA LRR+IIA N +Y +VR+LIF+SSFTWKHWIGL++TS AY  
Sbjct: 1   MANQGAKKRKEENAKHMAKLRRIIIASNAVYFVVRMLIFYSSFTWKHWIGLVITSLAYAF 60

Query: 371 PYNQLAKMANPTYGDDGELLDGGFDMSTGGICGYLHDVIYITSFVQIMSIVSGKFWYTYL 430
           PY QL +MA P+  DDGEL+DGGFDM+TGGICGYLHDVIYIT FVQ+ SI++GKFWYTYL
Sbjct: 61  PYKQLDQMAKPSVTDDGELIDGGFDMTTGGICGYLHDVIYITCFVQLASIITGKFWYTYL 120

Query: 431 VIPAFGAYKSSGFIRGLLSQGSEDVAEDEKTRKKREKMEKKASRVKFLKTKNR 484
           VIPAFG YK+SG IRG +SQGSE   EDEK+RKKREKME+KASR + +KT+ R
Sbjct: 121 VIPAFGVYKASGLIRGFMSQGSEGGVEDEKSRKKREKMERKASRGQVVKTRTR 173

[Close]

BLAST of Moc08g40450 vs. TAIR 10
Match: AT4G30480.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 254.2 bits (648), Expect = 2.1e-67
Identity = 151/264 (57.20%), Postives = 182/264 (68.94%), Query Frame = 0


Query: 3   ETEDAVPSPPKASASTTKTMDSSGGASTSNATKDPSDGFETASDGELGDSGDER------ 62
           E E  + + PK ++S+     S     T     D SDGFETAS+ E+ D   E       
Sbjct: 10  EDEILIKNEPKPASSS-----SPQPTETKQVDGDDSDGFETASEREISDEEGEEDGTKND 69

Query: 63  ----QEHPDQHPQEEEKIPELTEDEI-------KEKALAEANSAKLAGNKLFGEGKYEEA 122
               QE P    ++EE+I  ++E E        KEKALAEAN AK  GNKLF  G YEEA
Sbjct: 70  AVTSQEEPQHSEKKEEQIELMSEGEAIVDDGSNKEKALAEANEAKAEGNKLFVNGLYEEA 129

Query: 123 ILEYDRALQIAPDMPSAVELRSICHGNRGVCFLKLEKYNDTIKECTKAIELNPAYIKALS 182
           + +Y  AL++  ++P ++ELRSIC+ NRGVCFLKL K  +TIKECTKA+ELNP Y KAL 
Sbjct: 130 LSKYAFALELVQELPESIELRSICYLNRGVCFLKLGKCEETIKECTKALELNPTYNKALV 189

Query: 183 RRGEAHEKLENFEEAIHDMKKILELDSSNVQARKAICRLEPLAEQKREKMKEEMIGKLKD 242
           RR EAHEKLE+FE+A+ D+KKILELD SN QARK I RLEPLA +KREKMKEE I KLK+
Sbjct: 190 RRAEAHEKLEHFEDAVTDLKKILELDPSNDQARKGIRRLEPLAAEKREKMKEEAITKLKE 249

Query: 243 VGNSLLGRFGMSVDNFKAVKDPNT 250
           +GNS+LGRFGMSVDNFKAVKDPNT
Sbjct: 250 MGNSILGRFGMSVDNFKAVKDPNT 268

[Close]

BLAST of Moc08g40450 vs. TAIR 10
Match: AT4G30500.1 (Protein of unknown function (DUF788) )

HSP 1 Score: 245.4 bits (625), Expect = 9.7e-65
Identity = 121/173 (69.94%), Postives = 146/173 (84.39%), Query Frame = 0


Query: 311 MANQGAKKRKEENVRHMANLRRLIIACNVIYIMVRLLIFHSSFTWKHWIGLIVTSAAYFI 370
           MANQGAKKRK+EN RHMA LR ++I CN++Y++VR++I HSS TWK+WIGL++TS  Y I
Sbjct: 1   MANQGAKKRKDENARHMAKLRLIMILCNILYVLVRVIISHSSHTWKNWIGLVLTSLGYGI 60

Query: 371 PYNQLAKMANPTYGDDGELLDGGFDMSTGGICGYLHDVIYITSFVQIMSIVSGKFWYTYL 430
           PY  L +MA P+  D GELLDGGFDMST G+CGYLHDV+YIT FVQ+ SI+SGKFWY YL
Sbjct: 61  PYKLLHQMAKPSVSDAGELLDGGFDMSTPGMCGYLHDVLYITCFVQVGSIISGKFWYAYL 120

Query: 431 VIPAFGAYKSSGFIRGLLSQGSEDVAEDEKTRKKREKMEKKASRVKFLKTKNR 484
           VIPAFGAYK+SG I+GLLS GSE   EDEKTRKKREKME+KASR + +KT++R
Sbjct: 121 VIPAFGAYKASGLIKGLLSHGSEGGVEDEKTRKKREKMERKASRGQVVKTRSR 173

[Close]

BLAST of Moc08g40450 vs. TAIR 10
Match: AT4G30480.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 151.4 bits (381), Expect = 1.9e-36
Identity = 96/196 (48.98%), Postives = 122/196 (62.24%), Query Frame = 0


Query: 3   ETEDAVPSPPKASASTTKTMDSSGGASTSNATKDPSDGFETASDGELGDSGDER------ 62
           E E  + + PK ++S+     S     T     D SDGFETAS+ E+ D   E       
Sbjct: 10  EDEILIKNEPKPASSS-----SPQPTETKQVDGDDSDGFETASEREISDEEGEEDGTKND 69

Query: 63  ----QEHPDQHPQEEEKIPELTEDEI-------KEKALAEANSAKLAGNKLFGEGKYEEA 122
               QE P    ++EE+I  ++E E        KEKALAEAN AK  GNKLF  G YEEA
Sbjct: 70  AVTSQEEPQHSEKKEEQIELMSEGEAIVDDGSNKEKALAEANEAKAEGNKLFVNGLYEEA 129

Query: 123 ILEYDRALQIAPDMPSAVELRSICHGNRGVCFLKLEKYNDTIKECTKAIELNPAYIKALS 182
           + +Y  AL++  ++P ++ELRSIC+ NRGVCFLKL K  +TIKECTKA+ELNP Y KAL 
Sbjct: 130 LSKYAFALELVQELPESIELRSICYLNRGVCFLKLGKCEETIKECTKALELNPTYNKALV 189

[Close]

BLAST of Moc08g40450 vs. TAIR 10
Match: AT4G30480.3 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 93.2 bits (230), Expect = 6.1e-19
Identity = 67/155 (43.23%), Postives = 88/155 (56.77%), Query Frame = 0


Query: 3   ETEDAVPSPPKASASTTKTMDSSGGASTSNATKDPSDGFETASDGELGDSGDER------ 62
           E E  + + PK ++S+     S     T     D SDGFETAS+ E+ D   E       
Sbjct: 10  EDEILIKNEPKPASSS-----SPQPTETKQVDGDDSDGFETASEREISDEEGEEDGTKND 69

Query: 63  ----QEHPDQHPQEEEKIPELTEDEI-------KEKALAEANSAKLAGNKLFGEGKYEEA 122
               QE P    ++EE+I  ++E E        KEKALAEAN AK  GNKLF  G YEEA
Sbjct: 70  AVTSQEEPQHSEKKEEQIELMSEGEAIVDDGSNKEKALAEANEAKAEGNKLFVNGLYEEA 129

Query: 123 ILEYDRALQIAPDMPSAVELRSICHGNRGVCFLKL 141
           + +Y  AL++  ++P ++ELRSIC+ NRGVCFLKL
Sbjct: 130 LSKYAFALELVQELPESIELRSICYLNRGVCFLKL 159

The following BLAST results are available for this feature:

BLAST of Moc08g40450 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022153385.1	9.5e-131	97.66	tetratricopeptide repeat protein 1 [Momordica charantia]	[more]
XP_023522143.1	8.9e-113	84.77	tetratricopeptide repeat protein 1-like [Cucurbita pepo subsp. pepo] >XP_0235473...	[more]
KAG7030071.1	9.9e-112	83.59	Tetratricopeptide repeat protein 1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6599130.1	9.9e-112	83.59	Tetratricopeptide repeat protein 1, partial [Cucurbita argyrosperma subsp. soror...	[more]
XP_022999753.1	4.9e-111	83.59	tetratricopeptide repeat protein 1 [Cucurbita maxima]	[more]

BLAST of Moc08g40450 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3ZBR5	8.0e-32	41.15	Tetratricopeptide repeat protein 1 OS=Bos taurus OX=9913 GN=TTC1 PE=2 SV=1	[more]
Q91Z38	1.4e-28	37.61	Tetratricopeptide repeat protein 1 OS=Mus musculus OX=10090 GN=Ttc1 PE=1 SV=1	[more]
Q99614	1.9e-28	35.83	Tetratricopeptide repeat protein 1 OS=Homo sapiens OX=9606 GN=TTC1 PE=1 SV=1	[more]
Q54UB0	4.6e-19	35.26	Transmembrane protein 208 homolog OS=Dictyostelium discoideum OX=44689 GN=tmem20...	[more]
Q6NYP0	2.3e-18	35.29	Transmembrane protein 208 OS=Danio rerio OX=7955 GN=tmem208 PE=2 SV=1	[more]

BLAST of Moc08g40450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DGP0	4.6e-131	97.66	tetratricopeptide repeat protein 1 OS=Momordica charantia OX=3673 GN=LOC11102089...	[more]
A0A6J1KKL8	2.4e-111	83.59	tetratricopeptide repeat protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111494007 P...	[more]
A0A6J1G423	3.1e-111	83.59	tetratricopeptide repeat protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111450555...	[more]
A0A6J1FAT2	3.9e-106	81.25	tetratricopeptide repeat protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A0A0LJ51	7.4e-105	80.86	TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G036720 ...	[more]

BLAST of Moc08g40450 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G23940.1	3.8e-69	73.41	Protein of unknown function (DUF788)	[more]
AT4G30480.2	2.1e-67	57.20	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G30500.1	9.7e-65	69.94	Protein of unknown function (DUF788)	[more]
AT4G30480.1	1.9e-36	48.98	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G30480.3	6.1e-19	43.23	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019734	Tetratricopeptide repeat	SMART	SM00028	tpr_5	coord: 86..119 e-value: 0.17 score: 21.0 coord: 161..194 e-value: 7.4E-5 score: 32.1 coord: 127..160 e-value: 1.8E-4 score: 30.9
IPR019734	Tetratricopeptide repeat	PFAM	PF13181	TPR_8	coord: 97..118 e-value: 0.21 score: 11.9
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 161..194 score: 10.0304
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 86..119 score: 9.8239
IPR013105	Tetratricopeptide repeat 2	PFAM	PF07719	TPR_2	coord: 162..193 e-value: 1.7E-5 score: 24.6
IPR008506	SRP-independent targeting protein 2/TMEM208	PFAM	PF05620	TMEM208_SND2	coord: 311..472 e-value: 1.0E-53 score: 181.6
IPR008506	SRP-independent targeting protein 2/TMEM208	PANTHER	PTHR13505	TRANSMEMBRANE PROTEIN 208	coord: 311..482
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 47..222 e-value: 7.8E-42 score: 144.7
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 85..214
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 49..72
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 451..483
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 452..475
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..72
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..39
None	No IPR available	PANTHER	PTHR13505:SF8	BNAA01G06570D PROTEIN	coord: 311..482

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc08g40450.1	Moc08g40450.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006624	vacuolar protein processing
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005773	vacuole
molecular_function	GO:0005515	protein binding