Moc08g39510 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc08g39510
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	DNA ligase
Location	chr8: 30106589 .. 30115024 (-)
RNA-Seq Expression	Moc08g39510
Synteny	Moc08g39510

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGGAGCTCATCAACTTCAATGTTCTATCAACTCTGTTCGATTGGATTCAGCGGAGCAAATCTTCCGCCAAGAAGCGTTCCAAGTTCCGCAAGTTTCTCGACACCTTCTGCAGTTCTGCCGACTATTTCTCCGCCATCCGCTTGATTCTGCCCACCCTCGACCGGGAGCGCGGCACCTATGGCCTCAAGGAGTCTGTACTCGCCACTTGCCTTATCGACGCTCTTGGCATCTCTAGAGACTCCGACGACGCTCTTCGTCTTAACAATTGGCGCAAAGGCGGTGCTAAGACTGGAGCTAATGCCGGCAATTTCGCTCTTGTTGCTGCCGAGGTGACCCTTGCTTTTCTCCTTTCGTTTTTAACTCTATTGGTAAAGATTTAGCACATCTTTCTATTTAGTCATGTAATTTTTTATTTTGAACTCGTGGGGTTGATTAGATTAATTTACCCGTTTAGCCTTTCTTTTCATGTATTTAACTCAATGTAATTTATTAGTTGTATGATGAGCAAGAAATTCTGGAATTCTTCGTTAATGGATGAATGTTGATTCATAATGAGTATACATGCTTGTACCTTGGAATTAGGTGAATTTGAGATTTTACATGAATGCTATGGTCCAAATTTATACGAGTTACTTATTTTGAATAGATTTGTACCTTCTTTTTCTTGCTGCAATAGGTTTTGCAGCGCAGGCAAGGAATGACCCCTGGTGGTCTAACAATTAAAGAGTTAAATGATCTGCTGGACCGTTTGGCTTTAAGTGAAAACAGGTTAAACTTGATACTTAATTTTACATTTTTTTAAAAATTTATTTATTTGAATTTGGAACAAAAATTATTCAAGGATACAAACTCCCGAAGGAGTGAATTGAATGTAAAAAAGGAGCAAAGCTATAGTGAGAAAGTAAATACATCTCAATTCGGACAAATAAGACCATGCCAGTTATGTTCAAATTTTATAAACTGAAACCATTGAGAATCCCTGAATTTAGCTAGATCAAAGTGCTATAGCCAAGTTTACTATTTTCTTAAAAAAATCCTTTTATTTCTCACGAACCACAATTCTGAAAGAATAGCTTAGCTTTATTGAGCATTGATTCATATTAAATGGGCTCGAGGAGAAAGAACTGGTCCATAAAGAAGCTGAATCGAATTACTTTTTGTATCATTTTAAAACACCTATTTGAGATTGAACTATTAATGTGTGTGTTTTTTTTAAGAAGTATGAAATTACAATTATATCTTTGTGCTTGGAGCAGTGACGGAGCTAGTGAGGCTCTAACCAAGGCATCTATTGCTGGTAAACAAAACAAAATTTACAATTACAATTTCCTTTCCATCTATGTAGTCCAAACGAAAGCTCTAACAAAATGCATACAAACGATCTTTTTTTCCCTTTGAAAAGGGGTGTCCCGGAAGAGTGTAGGCCAAAAGGAGGTTTGTATCGGCGAGTAAAGTGGTAGACCATTTGAAGACAGAGAGCGTTAATGTCCAAAGCCTTGATATTAATTTGCATGTGATAAAGATGTCACATATGGCCTTGGGATTCATTGTTTTCCTTGTATAAGACTCACCAATGAGGTGAGATGCTCATGTATGGCATCATAGTTGAAGTTTGCATGAGTGGCTTTGATACTCACCTCCGTAAGGAAGAACTTCCATTTCTTTTGAATTCGGCCTTTGATTAGGATTTTAATTCTTATCCATTGGAGAATGCAGCTGATCAATCTGAGGGGTTACTCTCAATTAATGATAGTCTAGAAAACTTAAATGATCTCAACGTGAGTAGCATTGAATCTGAGAGTAATCCCTTGGAAGATGAAGAGGTAAATTCCTTGCACTTTGATGTGGAATATGATGGACTGGTTGATTTATTAAATGAAAATAATGTAGCAGGTGTGAAAGAGGGTTCTCCCTTCGAGTTTAATACAGATATTAATGATCTGAATTTTGTGATTGGTTCATCAGAGATCTTTTCCAAATCTCTTAAGGAGGCTAACGGTCCTATCATGGAATCTGGAAGTGTTGATTTTTTGACGTACTTAGAGGAAGTTGGTATATCCTACTTGAAATCAAGTCCAAAAGCATTAATCAGGATTAATTTATTCAGTACAGAGCTGATTCGTTATGATTTGACCAAGATTTCTCCCCATTTGTTTTCTTGTTAAGTAATTTGCAGTCATTGAAGATTATCTAGTGAAATACAAGTGGCCTAATCCTTCTGTCTACAGTCGAAGCAGTCTCAAAGTTGATTCAAAATGCCATCAAAGATTCTTTAGAGGAGGAAATTTCGGATTTTAATAATGATTCGACGGCTAGTGTCAGTAGCATTGATTCATAATTTGAAGGATATTTAGATGGCATTTCGAAAGATCCTAGCAAAATTGGGCTTCTTCTCCCTTCTGCAAGGGGAAATTCCTCTATCATTAGCGTTGAGTTCAACTCTATGGAGGCTCCGAAGGATTTTGTATTTTCCTTGGCTGAGTAGGGGTTCTTTTCGATATACCTTGTGGTGTTTAGTAGCTTTAAAGGGTACTGGTGCAACCCTTCTTGCCGAAGTATTCTTGGCTTTTTCTTCCAAAGTTTGGTCCTTGGGGCAGTGGATTAGTAGCTAGTCTTGCATTTTGATGGTTTTGGTCTTAGCTTCAGTTGCTCTTAGTTTTAGGGTAGGCTTTTTGTTCATTAATGTTCTATTTTGACCATTGTATTTTTTTGGGTCTTTTCTTTATGTTTTGGTTGTTCGTTGTTCCTTCCGCTCCCTTCAACCATTTGTATCCTTGAACTTTTTTCTTTCTTTTTATCTATCAATTCGTATTTTATAGGAAAAACTTTAATTTCTTAAAATCATTGAATCTAGTAGTAATCTTAACATATCCATTTGCCTCCTCGTTATCGAACTAATAATGTCTTGCTATAACTGTTGCCCGTGAAGTCAACGAATAAGGAAAACTTTTTGAAAGTTTCCCAAAAACTGAAGGACCAAATTGTAACATTTGAAAGTACCAGAATTAACATATGAGTACTGAGACTAAAATTGTATTTTAACAAATTGTTTATTATGGCTCTAGATCGGAGTGTTGTTTGCTTATTTGCATTTTCTTTACTCGTATATTTCTGAAAAAATATGAAGCTTTTTGTAATCTGTCTTATTATCAGATTTTCTCATGGCTAAAGAAGATATTTTGCTTTTCTGGGTTCTGAGTTTTGGCATAATCTTATTACACTGCGTCTCCATCTAAATATGTCTTTACCGCTTCACATTTCTCTGTTATATGTGATGGTTTTAAAAGCAGAGCAGAAAAAACTGCAGTTCTGTCTACTCTTATACAGAAGACGAATGCACAGGAAATGAAGTGGATTGTCATGATAATCCTCAAAGGTTTTTAACTTTTCTTACTACAAATATGTATTTCCAGATCTTGCAATAGTTCTCATACAGGCAATTTACTTTTTTAAATTTTGTATATCTTGTAGATCTGAAACTGGGAGTTAGTGAAAAGAGCATTTTTCATGAGTTCCATCCAGATGCAGAAGACTTATTCAATGTCACCTGTGACTTAAAACTGGTTTGTGAAAAGCTAAGGGATCGTAGAAAAAGGCATAAGCGTCAGGTCTGTTAAAAACGTGGAGCTAAATCTTTCTCTTGGATGACTTTAACAAGGTTTCTTTTGTTATTTTCCATCTTTGTTTTGTGTCAATTGAAGAATGTTTTTATAATTTTTTTTGGTTGGAGATTCTCGTATCCCCTAGACTTTGCAGATTTTCCCTTTCGATTAACTTGTTTTTTACCAGACAAAGAAAAGAAAAGAAAAGAAAATGTAACTCCTCTAGATTTTCACTATTTTCATATATTGTTTCGTTGTTCTATAATTTTCCTTTATATAAATAGGAAAACGGTTGGTAAGTAATAAATTGAAGGATTTGAAAGATAGAGCAATGAATGAAATAAGGCGTAGAGAGAGTTAAAGATTTGAAAAAAATAAAAATAAAAAGAGAGGGAGGGACCTTATAGATGAAGAGAGGGGAAAGTCAGTTTTGAACAAAATAGTACACAGAAAGGAGATATATAAATAAAGAGAGATGAAATTAAAATAAAAGGGTAGAGAGATTGAGGGAGGGGGGCCGGAGGGGAGAGAGATTGAAATACAAAGAGAAATATGAAGAAATGAGCAATAATGAGACTGATGGTAGTAGGCTTGAAAATTTACCTGTACTCGTATTCTTTGTCATTGATCCAATGAATGTCATCGATATTAGGTAAAACATGTTGTTGGTGATGCCACATAATATCTTTGATATTCCTGTAGTACATAATTAATGTTTTACATTTTTTTTTACTGTGATCTTAAAGGACATTGAAGTTGGAAAAGCTGTGCGACCGCAGCTGGCTTCAAGAGTTTCCAATGCAAATGCTGCATGGAAGAAGGTGTGAAGCTTTTACTGTAATATTTGTCTTCTGAGTTCGTTATTTATTTTTAATGGTTGAATACCTTGAAAATACAATAACTTAAAATCTTCAAATTGTCTACAGTTACATGGTAGTCTTTATTTATTTATTTATTTTTTAATCTACCATACACATCGAGTTTACTTCTTATAAATTTTATGTTTCATGCTCACCACGTTTCTCTCTGGCGCTTAGCTTCATGGGAAGGAAGTTGTAGTCGAATGCAAGTTTGATGGTGACCGTATTCAAATTCATAAGAATGGAACTGAAATACACTTCTTTTCAAGGTAGATGCACGTGACTTAAAGTTATCATCTGTTTCCATTTTTCCTTGTCTTCTTAAACCATTTGATGAAGCCCATACAAGTTATCCTTTCATTTGAACTCGCTGTGTAAGAAATTACAAAAATGGAATTAACATTTTATTAATATTGGTTGATCTACAGGTATACATCTGTGGTTCATTAGTGTGATCAATGTGGAAAAATTGACCTCCTACTCCATTTGCATTATTCCTTTTTTTTTTTTCTCTCTTTCTACATGTATTGCTCATCTTCAGGAACTTTCTCGATCACTCAGAATATGGACGTGGAATGTCTGATGTTATTGTTGAAAATATTATTGCCACTAGGTATCTTCTAATTTTTGGAAGCATTTATTTTATTTTATTTTTTGGCTTTTCCTACATTCTTGAAATAGCATGAGTTTCTTTAAAATGTGATCATTCATGGCTGCTATTAGTATTAGCTTAGACAATCAGGTTCTGGAAGATAAGAAAGTGTTTTTCCTTGGTACCAATTAAAGAAACAACTTAAAATATGATCAAATTCCAAAATATAAATAAGTTAGAGCATCAAACCATGTGCATTGCATGTGTCAAACCGTGAAAGCTGGATGTTCTCGATAATAAGCTTCCAAAGCCTTTTTTTTTCCCTTTTCATACAGTAGTAGTAGAGGTGTGACTTAAAGAGGACTTTAAATGCTAAGCTATGCTCATGTTGGCTTGCCCATTTTTGAAAGCAAAAAGTTTGGTCTTTTGAGGAGCTTGATGGCCAGCTAAGAAAAGAAATTAGATGAGAATTGATTTCTCTGCAGCTTGTTGTAGTAGAAGAGTAATATTCTTCAGACTTTCTCCCTGATCGACCAAATGAAGGAGATAAGGGTGTAGTTGTAGTAGAGGAGATAAAGATACAATAGGAGGGTATAACTCTCGTCATTGCCACTTTCTTACCCTTTTGATCTGAGGATAAGCCTTGTGAATCCTTCTCTTTTTTTCTCTAACATGCATCTCTCTCATGCGCACTCATCAACCAATGCTTCTACTGCTCTCCCTCTTTCTCTGTAGTGTATTACACTGTAATTTCTCTCTTATTCTCATATACTGTTTCTATTATTCCCCTCTGCAGTGTGTGTCTTTTAAATGGATATAAATACTATCTCCTGGTGTGCACTTATCATTAATGATTTTTTTATGTTTATTTATGAATATTATTTCTTAAAAATTCATAATATTCCGTTGTTGGATATTGTTTAGATTTTGTGTTTAATTTATATTTATGGATGTTAGAGTTGTTAATGATGATTTCTAGTCTATAAAGTGAGCTTTATTTGCTAGTTCAAATAATTTCTACGAGTTTTCGTGTGTCTGAGATTTTTCAAGATTTCTGTTTGGCATTGATATTTTTGTTAGTTCCAGACTTCCTTTTTTTTTACCTCTTTTTGACAAGAGACCTGACATTAAGAAGACAAAACTACCTAGAGTCTAGGGTGGAGGAAACCACCACCAAAGAAGACTCATGAGGGCTTTACGATCTAAGATTAATAAAAAAGAAACAGTATGGTTAGGGAACAAATTTTGTATAATGAACAAAGTCTCAAAAGGTATTTATAGGCTCAATTCTTTAACTTGTCTGGGTATGGATTTTTTCACTTTTTCCAAAATTGATGGCATTAGAAAATATCTCTACGGTGCGTAACTCAGATAGTGAAAGTTTTTTTATAGTGGAAAAATCTCAAGTTTCTGTCCAACCAAATGACCCACAAAAATGCTCGACATTTTTGTCAACGTCTAACTCCTTGTGTAAGTTTCTTATCCAAAAATTTGATGCACGCGTGATTATGCATTTGCACTCCTAATGCTGATCTTCCAGTGGACTACTTCCTTTCTTCCTGTAGAAAAAGGTTACAGTATTTTATGCTGTATAAAGTTCATTATGAATTTGAAGAATCGTAACTTTCCCTTGAATTATTTGTAGGTGTATACTTGATGGTGAAATGTTGGTGTGGGATAAATCTTTAAACCGTTTTGCAGAGTTTGGCTCAAACCAAGAAATAGGTGGTCTAGCTTAGATTTTTTTAGCTTCTATTTTTTTCGTTTGTGACAATTGCACCTTTTAAATTTTGAATTAAGCATCTAAATCTTCAGGATTAAAACTGGAAATTGACCATATATATTTGCTTATAACATACAACCTTTTTTTTTACCTCATTTTCAGCAAGGGCAGCAAAGGATGGATTGGACAGCGATCGTCAGGTCTTCTTTTGAGATAATTTACTTTTTTTTTTGCTATAACTGCTGGAGGATAGTAGTTTGACTTATGGTTCTTGTTCTTGTCTTTCTCTACTTCCATTGTGCAGTTATGCTGTATCCTTTTATTTCCTTTCCAACTGTACCAAGCTTGGAGGTTCAGTTCAATGTTCTGATTGAAAAAATATGTTTATAATTTCGTATCACTGAAATTGAAGTTATAGTTCTTATATCTTAACAAGAATGGACAGATGTTGCGTTCGATGTTCTTTATGTTGGAGATACTAGTGTTATTCACAGGAGTTTGAAAGAAAGACATGAGCTTCTGAGAGATGTAGTCAAGCCTGTGAAGGGACGATTGGAAATTTTAGTACCTAATGGTGGTCTTAATAGTGACTGTGCTGGTAAAATACATATCAATTTATGCCCTTATTTATGTTCGCTTAATATGTTGAAAGACATCTATCCTAATAAATAATTAAATCGGTTTTCTTGGGGCTTGGATTGTTTTATTTTTTAATTCTATATTTCCATACTTTTTTTTTTGAAAAGGAACCATGATTTTATTGAGAAATATGAAAGAAAACCAGGGCATGCAAAAAGATAGCCAAGCAAAGGGAGCCAAAATAAAAAGAGCTTGAATCTAACAAAATAAGACCTAACAGATAGTACAAAAACTTTACTACCGAGGCTCAAAAGAGAAATATGAAATCCAAAGAGGGATCAAACCTCCTCTCAAGATTTCTCCATCCCTCTAAAAATTCTATTGTTTCTCTCACACTAAAGATCCCATAAGATAGCCCAAACACTAGCGAGCTATATCATGTAAATACTTAAGAACTTTACTTTTAGATTGATAAGGTCTATGCAATAGTTTAATGGGAATAGGTCATCGTGGATGATGCATCTTAACTATGCTGTCATGCAGGGGATCCTTCTTGGTCACAAAGAGCTTATAATGCCGATGATGTGGAAAGATTTTTTAAAAATACCATTGAAAATAGGTATTTTTTGCAGTTTACTGAAAAGAAAATATTACAAATTTGTTATTAGGTCTACTGTCTTCCAAGTTCTTATAAGTTATATATGTTCTAATTTCCTGAGAACATTTGTTATTATTGGGAATTTTTGCTTAGAGATGAAGGTATTGTTATTAAGGACATGGGTTCCAAGTGGGAACCTGGTGATCGTAGTGGGAAGTGGTTAAAATTAAAGCCTGATTATGTTCGTGCTGGATCTGATTTGGATGCCCTCATCATAGGTCTTAAAGTTTTCTTGTTTTTCAGTTTGTTTGCATAAGCATAATTCTCATTTTTTTTTTATATCTAAATGTTTTGTTAACTGATAATAGGAGGTTACTATGGCTCTGGGCGACGGGGTGGGGAGGTTAGATTTTCTAGTAAATAAGTACGATGCATTTTCTTGGAAGATTAAGTCTGACACATATATTTATGAAGGTAG

mRNA sequence

ATGACGGAGCTCATCAACTTCAATGTTCTATCAACTCTGTTCGATTGGATTCAGCGGAGCAAATCTTCCGCCAAGAAGCGTTCCAAGTTCCGCAAGTTTCTCGACACCTTCTGCAGTTCTGCCGACTATTTCTCCGCCATCCGCTTGATTCTGCCCACCCTCGACCGGGAGCGCGGCACCTATGGCCTCAAGGAGTCTGTACTCGCCACTTGCCTTATCGACGCTCTTGGCATCTCTAGAGACTCCGACGACGCTCTTCGTCTTAACAATTGGCGCAAAGGCGGTGCTAAGACTGGAGCTAATGCCGGCAATTTCGCTCTTGTTGCTGCCGAGGTTTTGCAGCGCAGGCAAGGAATGACCCCTGGTGGTCTAACAATTAAAGAGTTAAATGATCTGCTGGACCGTTTGGCTTTAAGTGAAAACAGAGCAGAAAAAACTGCAGTTCTGTCTACTCTTATACAGAAGACGAATGCACAGGAAATGAAGTGGATTGTCATGATAATCCTCAAAGATCTGAAACTGGGAGTTAGTGAAAAGAGCATTTTTCATGAGTTCCATCCAGATGCAGAAGACTTATTCAATGTCACCTGTGACTTAAAACTGGTTTGTGAAAAGCTAAGGGATCGTAGAAAAAGGCATAAGCGTCAGGACATTGAAGTTGGAAAAGCTGTGCGACCGCAGCTGGCTTCAAGAGTTTCCAATGCAAATGCTGCATGGAAGAAGCTTCATGGGAAGGAAGTTGTAGTCGAATGCAAGTTTGATGGTGACCGTATTCAAATTCATAAGAATGGAACTGAAATACACTTCTTTTCAAGGAACTTTCTCGATCACTCAGAATATGGACGTGGAATGTCTGATGTTATTGTTGAAAATATTATTGCCACTAGGTGTATACTTGATGGTGAAATGTTGGTGTGGGATAAATCTTTAAACCGTTTTGCAGAGTTTGGCTCAAACCAAGAAATAGCAAGGGCAGCAAAGGATGGATTGGACAGCGATCGTCAGTTATGCTATGTTGCGTTCGATGTTCTTTATGTTGGAGATACTAGTGTTATTCACAGGAGTTTGAAAGAAAGACATGAGCTTCTGAGAGATGTAGTCAAGCCTGTGAAGGGACGATTGGAAATTTTAGTACCTAATGGTGGTCTTAATAGTGACTGTGCTGGGGATCCTTCTTGGTCACAAAGAGCTTATAATGCCGATGATGTGGAAAGATTTTTTAAAAATACCATTGAAAATAGGTAG

Coding sequence (CDS)

ATGACGGAGCTCATCAACTTCAATGTTCTATCAACTCTGTTCGATTGGATTCAGCGGAGCAAATCTTCCGCCAAGAAGCGTTCCAAGTTCCGCAAGTTTCTCGACACCTTCTGCAGTTCTGCCGACTATTTCTCCGCCATCCGCTTGATTCTGCCCACCCTCGACCGGGAGCGCGGCACCTATGGCCTCAAGGAGTCTGTACTCGCCACTTGCCTTATCGACGCTCTTGGCATCTCTAGAGACTCCGACGACGCTCTTCGTCTTAACAATTGGCGCAAAGGCGGTGCTAAGACTGGAGCTAATGCCGGCAATTTCGCTCTTGTTGCTGCCGAGGTTTTGCAGCGCAGGCAAGGAATGACCCCTGGTGGTCTAACAATTAAAGAGTTAAATGATCTGCTGGACCGTTTGGCTTTAAGTGAAAACAGAGCAGAAAAAACTGCAGTTCTGTCTACTCTTATACAGAAGACGAATGCACAGGAAATGAAGTGGATTGTCATGATAATCCTCAAAGATCTGAAACTGGGAGTTAGTGAAAAGAGCATTTTTCATGAGTTCCATCCAGATGCAGAAGACTTATTCAATGTCACCTGTGACTTAAAACTGGTTTGTGAAAAGCTAAGGGATCGTAGAAAAAGGCATAAGCGTCAGGACATTGAAGTTGGAAAAGCTGTGCGACCGCAGCTGGCTTCAAGAGTTTCCAATGCAAATGCTGCATGGAAGAAGCTTCATGGGAAGGAAGTTGTAGTCGAATGCAAGTTTGATGGTGACCGTATTCAAATTCATAAGAATGGAACTGAAATACACTTCTTTTCAAGGAACTTTCTCGATCACTCAGAATATGGACGTGGAATGTCTGATGTTATTGTTGAAAATATTATTGCCACTAGGTGTATACTTGATGGTGAAATGTTGGTGTGGGATAAATCTTTAAACCGTTTTGCAGAGTTTGGCTCAAACCAAGAAATAGCAAGGGCAGCAAAGGATGGATTGGACAGCGATCGTCAGTTATGCTATGTTGCGTTCGATGTTCTTTATGTTGGAGATACTAGTGTTATTCACAGGAGTTTGAAAGAAAGACATGAGCTTCTGAGAGATGTAGTCAAGCCTGTGAAGGGACGATTGGAAATTTTAGTACCTAATGGTGGTCTTAATAGTGACTGTGCTGGGGATCCTTCTTGGTCACAAAGAGCTTATAATGCCGATGATGTGGAAAGATTTTTTAAAAATACCATTGAAAATAGGTAG

Protein sequence

MTELINFNVLSTLFDWIQRSKSSAKKRSKFRKFLDTFCSSADYFSAIRLILPTLDRERGTYGLKESVLATCLIDALGISRDSDDALRLNNWRKGGAKTGANAGNFALVAAEVLQRRQGMTPGGLTIKELNDLLDRLALSENRAEKTAVLSTLIQKTNAQEMKWIVMIILKDLKLGVSEKSIFHEFHPDAEDLFNVTCDLKLVCEKLRDRRKRHKRQDIEVGKAVRPQLASRVSNANAAWKKLHGKEVVVECKFDGDRIQIHKNGTEIHFFSRNFLDHSEYGRGMSDVIVENIIATRCILDGEMLVWDKSLNRFAEFGSNQEIARAAKDGLDSDRQLCYVAFDVLYVGDTSVIHRSLKERHELLRDVVKPVKGRLEILVPNGGLNSDCAGDPSWSQRAYNADDVERFFKNTIENR

Homology

[Close]

BLAST of Moc08g39510 vs. NCBI nr
Match: XP_022149864.1 (DNA ligase 4 isoform X3 [Momordica charantia])

HSP 1 Score: 826.6 bits (2134), Expect = 9.3e-236
Identity = 414/414 (100.00%), Postives = 414/414 (100.00%), Query Frame = 0


Query: 1   MTELINFNVLSTLFDWIQRSKSSAKKRSKFRKFLDTFCSSADYFSAIRLILPTLDRERGT 60
           MTELINFNVLSTLFDWIQRSKSSAKKRSKFRKFLDTFCSSADYFSAIRLILPTLDRERGT
Sbjct: 1   MTELINFNVLSTLFDWIQRSKSSAKKRSKFRKFLDTFCSSADYFSAIRLILPTLDRERGT 60

Query: 61  YGLKESVLATCLIDALGISRDSDDALRLNNWRKGGAKTGANAGNFALVAAEVLQRRQGMT 120
           YGLKESVLATCLIDALGISRDSDDALRLNNWRKGGAKTGANAGNFALVAAEVLQRRQGMT
Sbjct: 61  YGLKESVLATCLIDALGISRDSDDALRLNNWRKGGAKTGANAGNFALVAAEVLQRRQGMT 120

Query: 121 PGGLTIKELNDLLDRLALSENRAEKTAVLSTLIQKTNAQEMKWIVMIILKDLKLGVSEKS 180
           PGGLTIKELNDLLDRLALSENRAEKTAVLSTLIQKTNAQEMKWIVMIILKDLKLGVSEKS
Sbjct: 121 PGGLTIKELNDLLDRLALSENRAEKTAVLSTLIQKTNAQEMKWIVMIILKDLKLGVSEKS 180

Query: 181 IFHEFHPDAEDLFNVTCDLKLVCEKLRDRRKRHKRQDIEVGKAVRPQLASRVSNANAAWK 240
           IFHEFHPDAEDLFNVTCDLKLVCEKLRDRRKRHKRQDIEVGKAVRPQLASRVSNANAAWK
Sbjct: 181 IFHEFHPDAEDLFNVTCDLKLVCEKLRDRRKRHKRQDIEVGKAVRPQLASRVSNANAAWK 240

Query: 241 KLHGKEVVVECKFDGDRIQIHKNGTEIHFFSRNFLDHSEYGRGMSDVIVENIIATRCILD 300
           KLHGKEVVVECKFDGDRIQIHKNGTEIHFFSRNFLDHSEYGRGMSDVIVENIIATRCILD
Sbjct: 241 KLHGKEVVVECKFDGDRIQIHKNGTEIHFFSRNFLDHSEYGRGMSDVIVENIIATRCILD 300

Query: 301 GEMLVWDKSLNRFAEFGSNQEIARAAKDGLDSDRQLCYVAFDVLYVGDTSVIHRSLKERH 360
           GEMLVWDKSLNRFAEFGSNQEIARAAKDGLDSDRQLCYVAFDVLYVGDTSVIHRSLKERH
Sbjct: 301 GEMLVWDKSLNRFAEFGSNQEIARAAKDGLDSDRQLCYVAFDVLYVGDTSVIHRSLKERH 360

Query: 361 ELLRDVVKPVKGRLEILVPNGGLNSDCAGDPSWSQRAYNADDVERFFKNTIENR 415
           ELLRDVVKPVKGRLEILVPNGGLNSDCAGDPSWSQRAYNADDVERFFKNTIENR
Sbjct: 361 ELLRDVVKPVKGRLEILVPNGGLNSDCAGDPSWSQRAYNADDVERFFKNTIENR 414

[Close]

BLAST of Moc08g39510 vs. NCBI nr
Match: XP_022149865.1 (DNA ligase 4 isoform X4 [Momordica charantia])

HSP 1 Score: 826.6 bits (2134), Expect = 9.3e-236
Identity = 414/414 (100.00%), Postives = 414/414 (100.00%), Query Frame = 0


Query: 1   MTELINFNVLSTLFDWIQRSKSSAKKRSKFRKFLDTFCSSADYFSAIRLILPTLDRERGT 60
           MTELINFNVLSTLFDWIQRSKSSAKKRSKFRKFLDTFCSSADYFSAIRLILPTLDRERGT
Sbjct: 1   MTELINFNVLSTLFDWIQRSKSSAKKRSKFRKFLDTFCSSADYFSAIRLILPTLDRERGT 60

Query: 61  YGLKESVLATCLIDALGISRDSDDALRLNNWRKGGAKTGANAGNFALVAAEVLQRRQGMT 120
           YGLKESVLATCLIDALGISRDSDDALRLNNWRKGGAKTGANAGNFALVAAEVLQRRQGMT
Sbjct: 61  YGLKESVLATCLIDALGISRDSDDALRLNNWRKGGAKTGANAGNFALVAAEVLQRRQGMT 120

Query: 121 PGGLTIKELNDLLDRLALSENRAEKTAVLSTLIQKTNAQEMKWIVMIILKDLKLGVSEKS 180
           PGGLTIKELNDLLDRLALSENRAEKTAVLSTLIQKTNAQEMKWIVMIILKDLKLGVSEKS
Sbjct: 121 PGGLTIKELNDLLDRLALSENRAEKTAVLSTLIQKTNAQEMKWIVMIILKDLKLGVSEKS 180

Query: 181 IFHEFHPDAEDLFNVTCDLKLVCEKLRDRRKRHKRQDIEVGKAVRPQLASRVSNANAAWK 240
           IFHEFHPDAEDLFNVTCDLKLVCEKLRDRRKRHKRQDIEVGKAVRPQLASRVSNANAAWK
Sbjct: 181 IFHEFHPDAEDLFNVTCDLKLVCEKLRDRRKRHKRQDIEVGKAVRPQLASRVSNANAAWK 240

Query: 241 KLHGKEVVVECKFDGDRIQIHKNGTEIHFFSRNFLDHSEYGRGMSDVIVENIIATRCILD 300
           KLHGKEVVVECKFDGDRIQIHKNGTEIHFFSRNFLDHSEYGRGMSDVIVENIIATRCILD
Sbjct: 241 KLHGKEVVVECKFDGDRIQIHKNGTEIHFFSRNFLDHSEYGRGMSDVIVENIIATRCILD 300

Query: 301 GEMLVWDKSLNRFAEFGSNQEIARAAKDGLDSDRQLCYVAFDVLYVGDTSVIHRSLKERH 360
           GEMLVWDKSLNRFAEFGSNQEIARAAKDGLDSDRQLCYVAFDVLYVGDTSVIHRSLKERH
Sbjct: 301 GEMLVWDKSLNRFAEFGSNQEIARAAKDGLDSDRQLCYVAFDVLYVGDTSVIHRSLKERH 360

Query: 361 ELLRDVVKPVKGRLEILVPNGGLNSDCAGDPSWSQRAYNADDVERFFKNTIENR 415
           ELLRDVVKPVKGRLEILVPNGGLNSDCAGDPSWSQRAYNADDVERFFKNTIENR
Sbjct: 361 ELLRDVVKPVKGRLEILVPNGGLNSDCAGDPSWSQRAYNADDVERFFKNTIENR 414

[Close]

BLAST of Moc08g39510 vs. NCBI nr
Match: XP_022149862.1 (DNA ligase 4 isoform X1 [Momordica charantia])

HSP 1 Score: 822.0 bits (2122), Expect = 2.3e-234
Identity = 414/415 (99.76%), Postives = 414/415 (99.76%), Query Frame = 0


Query: 1   MTELINFNVLSTLFDWIQRSKSSAKKRSKFRKFLDTFCSSADYFSAIRLILPTLDRERGT 60
           MTELINFNVLSTLFDWIQRSKSSAKKRSKFRKFLDTFCSSADYFSAIRLILPTLDRERGT
Sbjct: 1   MTELINFNVLSTLFDWIQRSKSSAKKRSKFRKFLDTFCSSADYFSAIRLILPTLDRERGT 60

Query: 61  YGLKESVLATCLIDALGISRDSDDALRLNNWRKGGAKTGANAGNFALVAAEVLQRRQGMT 120
           YGLKESVLATCLIDALGISRDSDDALRLNNWRKGGAKTGANAGNFALVAAEVLQRRQGMT
Sbjct: 61  YGLKESVLATCLIDALGISRDSDDALRLNNWRKGGAKTGANAGNFALVAAEVLQRRQGMT 120

Query: 121 PGGLTIKELNDLLDRLALSEN-RAEKTAVLSTLIQKTNAQEMKWIVMIILKDLKLGVSEK 180
           PGGLTIKELNDLLDRLALSEN RAEKTAVLSTLIQKTNAQEMKWIVMIILKDLKLGVSEK
Sbjct: 121 PGGLTIKELNDLLDRLALSENSRAEKTAVLSTLIQKTNAQEMKWIVMIILKDLKLGVSEK 180

Query: 181 SIFHEFHPDAEDLFNVTCDLKLVCEKLRDRRKRHKRQDIEVGKAVRPQLASRVSNANAAW 240
           SIFHEFHPDAEDLFNVTCDLKLVCEKLRDRRKRHKRQDIEVGKAVRPQLASRVSNANAAW
Sbjct: 181 SIFHEFHPDAEDLFNVTCDLKLVCEKLRDRRKRHKRQDIEVGKAVRPQLASRVSNANAAW 240

Query: 241 KKLHGKEVVVECKFDGDRIQIHKNGTEIHFFSRNFLDHSEYGRGMSDVIVENIIATRCIL 300
           KKLHGKEVVVECKFDGDRIQIHKNGTEIHFFSRNFLDHSEYGRGMSDVIVENIIATRCIL
Sbjct: 241 KKLHGKEVVVECKFDGDRIQIHKNGTEIHFFSRNFLDHSEYGRGMSDVIVENIIATRCIL 300

Query: 301 DGEMLVWDKSLNRFAEFGSNQEIARAAKDGLDSDRQLCYVAFDVLYVGDTSVIHRSLKER 360
           DGEMLVWDKSLNRFAEFGSNQEIARAAKDGLDSDRQLCYVAFDVLYVGDTSVIHRSLKER
Sbjct: 301 DGEMLVWDKSLNRFAEFGSNQEIARAAKDGLDSDRQLCYVAFDVLYVGDTSVIHRSLKER 360

Query: 361 HELLRDVVKPVKGRLEILVPNGGLNSDCAGDPSWSQRAYNADDVERFFKNTIENR 415
           HELLRDVVKPVKGRLEILVPNGGLNSDCAGDPSWSQRAYNADDVERFFKNTIENR
Sbjct: 361 HELLRDVVKPVKGRLEILVPNGGLNSDCAGDPSWSQRAYNADDVERFFKNTIENR 415

[Close]

BLAST of Moc08g39510 vs. NCBI nr
Match: XP_022149863.1 (DNA ligase 4 isoform X2 [Momordica charantia])

HSP 1 Score: 822.0 bits (2122), Expect = 2.3e-234
Identity = 414/415 (99.76%), Postives = 414/415 (99.76%), Query Frame = 0


Query: 1   MTELINFNVLSTLFDWIQRSKSSAKKRSKFRKFLDTFCSSADYFSAIRLILPTLDRERGT 60
           MTELINFNVLSTLFDWIQRSKSSAKKRSKFRKFLDTFCSSADYFSAIRLILPTLDRERGT
Sbjct: 1   MTELINFNVLSTLFDWIQRSKSSAKKRSKFRKFLDTFCSSADYFSAIRLILPTLDRERGT 60

Query: 61  YGLKESVLATCLIDALGISRDSDDALRLNNWRKGGAKTGANAGNFALVAAEVLQRRQGMT 120
           YGLKESVLATCLIDALGISRDSDDALRLNNWRKGGAKTGANAGNFALVAAEVLQRRQGMT
Sbjct: 61  YGLKESVLATCLIDALGISRDSDDALRLNNWRKGGAKTGANAGNFALVAAEVLQRRQGMT 120

Query: 121 PGGLTIKELNDLLDRLALSEN-RAEKTAVLSTLIQKTNAQEMKWIVMIILKDLKLGVSEK 180
           PGGLTIKELNDLLDRLALSEN RAEKTAVLSTLIQKTNAQEMKWIVMIILKDLKLGVSEK
Sbjct: 121 PGGLTIKELNDLLDRLALSENSRAEKTAVLSTLIQKTNAQEMKWIVMIILKDLKLGVSEK 180

Query: 181 SIFHEFHPDAEDLFNVTCDLKLVCEKLRDRRKRHKRQDIEVGKAVRPQLASRVSNANAAW 240
           SIFHEFHPDAEDLFNVTCDLKLVCEKLRDRRKRHKRQDIEVGKAVRPQLASRVSNANAAW
Sbjct: 181 SIFHEFHPDAEDLFNVTCDLKLVCEKLRDRRKRHKRQDIEVGKAVRPQLASRVSNANAAW 240

Query: 241 KKLHGKEVVVECKFDGDRIQIHKNGTEIHFFSRNFLDHSEYGRGMSDVIVENIIATRCIL 300
           KKLHGKEVVVECKFDGDRIQIHKNGTEIHFFSRNFLDHSEYGRGMSDVIVENIIATRCIL
Sbjct: 241 KKLHGKEVVVECKFDGDRIQIHKNGTEIHFFSRNFLDHSEYGRGMSDVIVENIIATRCIL 300

Query: 301 DGEMLVWDKSLNRFAEFGSNQEIARAAKDGLDSDRQLCYVAFDVLYVGDTSVIHRSLKER 360
           DGEMLVWDKSLNRFAEFGSNQEIARAAKDGLDSDRQLCYVAFDVLYVGDTSVIHRSLKER
Sbjct: 301 DGEMLVWDKSLNRFAEFGSNQEIARAAKDGLDSDRQLCYVAFDVLYVGDTSVIHRSLKER 360

Query: 361 HELLRDVVKPVKGRLEILVPNGGLNSDCAGDPSWSQRAYNADDVERFFKNTIENR 415
           HELLRDVVKPVKGRLEILVPNGGLNSDCAGDPSWSQRAYNADDVERFFKNTIENR
Sbjct: 361 HELLRDVVKPVKGRLEILVPNGGLNSDCAGDPSWSQRAYNADDVERFFKNTIENR 415

[Close]

BLAST of Moc08g39510 vs. NCBI nr
Match: XP_022929706.1 (DNA ligase 4 [Cucurbita moschata] >XP_022929708.1 DNA ligase 4 [Cucurbita moschata])

HSP 1 Score: 786.6 bits (2030), Expect = 1.1e-223
Identity = 390/414 (94.20%), Postives = 405/414 (97.83%), Query Frame = 0


Query: 1   MTELINFNVLSTLFDWIQRSKSSAKKRSKFRKFLDTFCSSADYFSAIRLILPTLDRERGT 60
           MTELI F+VLS+LFDWIQRSKSSAKKRSKFRKF+DTFCS ADYFSAIRLILP+LDRERGT
Sbjct: 1   MTELIKFSVLSSLFDWIQRSKSSAKKRSKFRKFIDTFCSPADYFSAIRLILPSLDRERGT 60

Query: 61  YGLKESVLATCLIDALGISRDSDDALRLNNWRKGGAKTGANAGNFALVAAEVLQRRQGMT 120
           YGLKESVLATCLIDALG+SR+S+DALRL NWRKGGAKTGAN GNFALVAAEVLQRRQGMT
Sbjct: 61  YGLKESVLATCLIDALGMSRESEDALRLINWRKGGAKTGANVGNFALVAAEVLQRRQGMT 120

Query: 121 PGGLTIKELNDLLDRLALSENRAEKTAVLSTLIQKTNAQEMKWIVMIILKDLKLGVSEKS 180
           PGGL IKELNDLLDRLALSENRAEKTAVLSTLIQKTNAQEMKWIVMIILKDLKLGVSEKS
Sbjct: 121 PGGLLIKELNDLLDRLALSENRAEKTAVLSTLIQKTNAQEMKWIVMIILKDLKLGVSEKS 180

Query: 181 IFHEFHPDAEDLFNVTCDLKLVCEKLRDRRKRHKRQDIEVGKAVRPQLASRVSNANAAWK 240
           IFHEFHPDAEDLFNVTCDLKLVCEKLRDRR+RHKRQDIEVGKAVRPQLASRVSNANAAWK
Sbjct: 181 IFHEFHPDAEDLFNVTCDLKLVCEKLRDRRQRHKRQDIEVGKAVRPQLASRVSNANAAWK 240

Query: 241 KLHGKEVVVECKFDGDRIQIHKNGTEIHFFSRNFLDHSEYGRGMSDVIVENIIATRCILD 300
           KLHGKEVVVECKFDGDRIQIHKNGTEIH+FSRNFLDHSEYG GMSDVIV+N++ATRCILD
Sbjct: 241 KLHGKEVVVECKFDGDRIQIHKNGTEIHYFSRNFLDHSEYGHGMSDVIVQNVLATRCILD 300

Query: 301 GEMLVWDKSLNRFAEFGSNQEIARAAKDGLDSDRQLCYVAFDVLYVGDTSVIHRSLKERH 360
           GEMLVWDKSLNRFAEFGSNQEIARAAKDG DS+RQLCYVAFDVLYVGDTSVIHRSLKERH
Sbjct: 301 GEMLVWDKSLNRFAEFGSNQEIARAAKDGFDSNRQLCYVAFDVLYVGDTSVIHRSLKERH 360

Query: 361 ELLRDVVKPVKGRLEILVPNGGLNSDCAGDPSWSQRAYNADDVERFFKNTIENR 415
           ELLRDVVKPVKG+LEILVPNGGLNSDCAGDPSWS RAYN DDVERFFK+TIENR
Sbjct: 361 ELLRDVVKPVKGQLEILVPNGGLNSDCAGDPSWSIRAYNVDDVERFFKSTIENR 414

[Close]

BLAST of Moc08g39510 vs. ExPASy Swiss-Prot
Match: Q9LL84 (DNA ligase 4 OS=Arabidopsis thaliana OX=3702 GN=LIG4 PE=1 SV=1)

HSP 1 Score: 678.3 bits (1749), Expect = 5.4e-194
Identity = 334/416 (80.29%), Postives = 376/416 (90.38%), Query Frame = 0


Query: 1   MTELINFNVLSTLFDWIQRSKSSAKKRSKFRKFLDTFCSSADYFSAIRLILPTLDRERGT 60
           MTE I F+VL +LF+WIQ+SK+S++KRSKFRKFLDT+C  +DYF A+RLI+P+LDRERG+
Sbjct: 1   MTEEIKFSVLVSLFNWIQKSKTSSQKRSKFRKFLDTYCKPSDYFVAVRLIIPSLDRERGS 60

Query: 61  YGLKESVLATCLIDALGISRDSDDALRLNNWRKGG-AKTGANAGNFALVAAEVLQRRQGM 120
           YGLKESVLATCLIDALGISRD+ DA+RL NWRKGG AK GANAGNF+L+AAEVLQRRQGM
Sbjct: 61  YGLKESVLATCLIDALGISRDAPDAVRLLNWRKGGTAKAGANAGNFSLIAAEVLQRRQGM 120

Query: 121 TPGGLTIKELNDLLDRLALSENRAEKTAVLSTLIQKTNAQEMKWIVMIILKDLKLGVSEK 180
             GGLTIKELNDLLDRLA SENRAEKT VLSTLIQKTNAQEMKW++ IILKDLKLG+SEK
Sbjct: 121 ASGGLTIKELNDLLDRLASSENRAEKTLVLSTLIQKTNAQEMKWVIRIILKDLKLGMSEK 180

Query: 181 SIFHEFHPDAEDLFNVTCDLKLVCEKLRDRRKRHKRQDIEVGKAVRPQLASRVSNANAAW 240
           SIF EFHPDAEDLFNVTCDLKLVCEKLRDR +RHKRQDIEVGKAVRPQLA R+ + NAAW
Sbjct: 181 SIFQEFHPDAEDLFNVTCDLKLVCEKLRDRHQRHKRQDIEVGKAVRPQLAMRIGDVNAAW 240

Query: 241 KKLHGKEVVVECKFDGDRIQIHKNGTEIHFFSRNFLDHSEYGRGMSDVIVENIIATRCIL 300
           KKLHGK+VV ECKFDGDRIQIHKNGT+IH+FSRNFLDHSEY   MSD+IV+NI+  +CIL
Sbjct: 241 KKLHGKDVVAECKFDGDRIQIHKNGTDIHYFSRNFLDHSEYAHAMSDLIVQNILVDKCIL 300

Query: 301 DGEMLVWDKSLNRFAEFGSNQEIARAAKDGLDSDRQLCYVAFDVLYVGDTSVIHRSLKER 360
           DGEMLVWD SLNRFAEFGSNQEIA+AA++GLDS +QLCYVAFDVLYVGDTSVIH+SLKER
Sbjct: 301 DGEMLVWDTSLNRFAEFGSNQEIAKAAREGLDSHKQLCYVAFDVLYVGDTSVIHQSLKER 360

Query: 361 HELLRDVVKPVKGRLEILVPNGGLN-SDCAGDPSWSQRAYNADDVERFFKNTIENR 415
           HELL+ VVKP+KGRLE+LVP GGLN    +G+PSWS   + A DVERFFK T+ENR
Sbjct: 361 HELLKKVVKPLKGRLEVLVPEGGLNVHRPSGEPSWSIVVHAAADVERFFKETVENR 416

[Close]

BLAST of Moc08g39510 vs. ExPASy Swiss-Prot
Match: Q7X7E9 (Putative DNA ligase 4 OS=Oryza sativa subsp. japonica OX=39947 GN=LIG4 PE=2 SV=2)

HSP 1 Score: 577.8 bits (1488), Expect = 9.9e-164
Identity = 297/463 (64.15%), Postives = 353/463 (76.24%), Query Frame = 0


Query: 1   MTELINFNVLSTLFDWIQRSKSSAKKRSKFRKFLDTFCSSA---DYFSAIRLILPTLDRE 60
           M   + F +L  +F  + R +++AKKR++ R  LD         DYFSA+RL+LP LDRE
Sbjct: 1   MAATVRFGLLVAMFQAMSRDRTAAKKRARLRALLDRAYGPGGRDDYFSALRLVLPGLDRE 60

Query: 61  RGTYGLKESVLATCLIDALGISRDSDDALRLNNWRKGGAKTGANAGNFALVAAEVLQRRQ 120
           RG+YGLKE+ LA+ L+DALGI++DS DA+RL NWR+GG     NAGNFALVAAEVLQRRQ
Sbjct: 61  RGSYGLKEAALASVLVDALGIAKDSPDAVRLTNWRRGGG--FRNAGNFALVAAEVLQRRQ 120

Query: 121 GMTPGGLTIKELNDLLDRLALSEN--------------RAEKTAVLSTLIQKTNAQEMKW 180
           GMT GGLTIKE+ND LDRLA +EN              R+EK ++LS+LI+KTNA EMKW
Sbjct: 121 GMTSGGLTIKEVNDALDRLAATENSVCLESEKLLLILDRSEKASILSSLIKKTNALEMKW 180

Query: 181 IVMIILKDLKLGVSEKSIFHEFHPDAEDLFNVTCDLKLVCEKLRDRRKRHKRQDIEVGKA 240
           ++MIILKDLKLG+SEKS+FHEFHPDAEDLFNVTCDL+LVCEKL DR +RHKRQDIEVGKA
Sbjct: 181 LLMIILKDLKLGISEKSVFHEFHPDAEDLFNVTCDLRLVCEKLNDRSQRHKRQDIEVGKA 240

Query: 241 VRPQLASRVSNANAAWKKLHGKEVVVECKFDGDRIQIHKNGTEIHFFSRNFLDHSEYGRG 300
           VRPQL+ RV+NA++AWKKLHGK+VV ECKFDGDRIQIHKNG EIHFFSR+FLDHSEY  G
Sbjct: 241 VRPQLSMRVNNASSAWKKLHGKQVVAECKFDGDRIQIHKNGEEIHFFSRSFLDHSEYAPG 300

Query: 301 MSDVIVENIIATRCILDGEMLVWDKSLNRFAEFGSNQEIARAAKDGLDSDRQLC------ 360
           MS VI+ENI+  RCILDGEMLVWD  LNRFAEFGSNQEIA+AAK+GL++DRQLC      
Sbjct: 301 MSKVIIENILVDRCILDGEMLVWDTVLNRFAEFGSNQEIAKAAKEGLETDRQLCCILEWI 360

Query: 361 -------------------------YVAFDVLYVGDTSVIHRSLKERHELLRDVVKPVKG 415
                                    YVAFD+LY GDTSVIH+SL ERHE+L+ VV+P+KG
Sbjct: 361 ASYVLALCVNILSCQDFFFSNKRESYVAFDILYAGDTSVIHQSLTERHEILQKVVRPLKG 420

[Close]

BLAST of Moc08g39510 vs. ExPASy Swiss-Prot
Match: Q5R6L3 (DNA ligase 4 OS=Pongo abelii OX=9601 GN=DNL4 PE=2 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 1.9e-61
Identity = 146/396 (36.87%), Postives = 232/396 (58.59%), Query Frame = 0


Query: 5   INFNVLSTLFDWIQRSKSSAKKRSKFRKFLDTFCSSAD------------YFSAIRLILP 64
           + F  L +  + IQ+SK  A+K   FR+FLD++    D            ++ A+RLILP
Sbjct: 14  VPFADLCSTLERIQKSKGRAEKIRHFREFLDSWRKFHDAFHKNQKDVTDSFYPAMRLILP 73

Query: 65  TLDRERGTYGLKESVLATCLIDALGISRDSDDALRLNNWRKGGAKTGANAGNFALVAAEV 124
            L+RER  YG+KE++LA   I+ L + RD  DAL+L N+R     T  +AG+FA++A  V
Sbjct: 74  QLERERMAYGIKETMLAKLYIELLNLPRDGKDALKLLNYRT-PTGTHGDAGDFAMIAYFV 133

Query: 125 LQRRQGMTPGGLTIKELNDLLDRLALSENRAEKTAVLSTLIQ---KTNAQEMKWIVMIIL 184
           L+ R  +  G LTI+++NDLLD +A + +   K  +  +L+Q   +++A E KW++ +I+
Sbjct: 134 LKPR-CLQKGSLTIQQVNDLLDSIASNNSAKRKDLIKKSLLQLITQSSALEQKWLIRMII 193

Query: 185 KDLKLGVSEKSIFHEFHPDAEDLFNVTCDLKLVCEKLRDRRKRHKRQDIEVGKAVRPQLA 244
           KDLKLGVS+++IF  FH DA +L NVT DL+ VC +L D         I +  A +P LA
Sbjct: 194 KDLKLGVSQQTIFSVFHSDAVELHNVTTDLEKVCRQLHDPSVGLSDISITLFSAFKPMLA 253

Query: 245 SRVSNANAAWKKLHGKEVVVECKFDGDRIQIHKNGTEIHFFSRNFLDHS-EYG----RGM 304
           + +++     K +  +   +E K DG+R+Q+HK+G    +FSRN  +++ ++G     G 
Sbjct: 254 A-IADIEHIEKDMKHQSFYIETKLDGERMQMHKDGDVYKYFSRNGYNYTDQFGASPTEGS 313

Query: 305 SDVIVENIIATR---CILDGEMLVWDKSLNRFAEFGSNQEIARAAKDGLDSDRQLCYVAF 364
               + N   T    CILDGEM+ ++ +   F + G+  +I R  +   DSD Q CY  F
Sbjct: 314 LTPFIHNAFKTDIQICILDGEMMAYNPNTQTFMQKGTKFDIKRMVE---DSDLQTCYCVF 373

Query: 365 DVLYVGDTSVIHRSLKERHELLRDVVKPVKGRLEIL 378
           DVL V +  + H +L++R+E+L  +  P+ GR+EI+
Sbjct: 374 DVLMVNNKKLGHETLRKRYEILSSIFTPIPGRIEIV 403

[Close]

BLAST of Moc08g39510 vs. ExPASy Swiss-Prot
Match: P49917 (DNA ligase 4 OS=Homo sapiens OX=9606 GN=LIG4 PE=1 SV=2)

HSP 1 Score: 236.1 bits (601), Expect = 7.1e-61
Identity = 145/396 (36.62%), Postives = 231/396 (58.33%), Query Frame = 0


Query: 5   INFNVLSTLFDWIQRSKSSAKKRSKFRKFLDTFCSSAD------------YFSAIRLILP 64
           + F  L +  + IQ+SK  A+K   FR+FLD++    D            ++ A+RLILP
Sbjct: 14  VPFADLCSTLERIQKSKGRAEKIRHFREFLDSWRKFHDALHKNHKDVTDSFYPAMRLILP 73

Query: 65  TLDRERGTYGLKESVLATCLIDALGISRDSDDALRLNNWRKGGAKTGANAGNFALVAAEV 124
            L+RER  YG+KE++LA   I+ L + RD  DAL+L N+R     T  +AG+FA++A  V
Sbjct: 74  QLERERMAYGIKETMLAKLYIELLNLPRDGKDALKLLNYRT-PTGTHGDAGDFAMIAYFV 133

Query: 125 LQRRQGMTPGGLTIKELNDLLDRLALSENRAEKTAVLSTLIQ---KTNAQEMKWIVMIIL 184
           L+ R  +  G LTI+++NDLLD +A + +   K  +  +L+Q   +++A E KW++ +I+
Sbjct: 134 LKPR-CLQKGSLTIQQVNDLLDSIASNNSAKRKDLIKKSLLQLITQSSALEQKWLIRMII 193

Query: 185 KDLKLGVSEKSIFHEFHPDAEDLFNVTCDLKLVCEKLRDRRKRHKRQDIEVGKAVRPQLA 244
           KDLKLGVS+++IF  FH DA +L NVT DL+ VC +L D         I +  A +P LA
Sbjct: 194 KDLKLGVSQQTIFSVFHNDAAELHNVTTDLEKVCRQLHDPSVGLSDISITLFSAFKPMLA 253

Query: 245 SRVSNANAAWKKLHGKEVVVECKFDGDRIQIHKNGTEIHFFSRNFLDHS-EYG----RGM 304
           + +++     K +  +   +E K DG+R+Q+HK+G    +FSRN  +++ ++G     G 
Sbjct: 254 A-IADIEHIEKDMKHQSFYIETKLDGERMQMHKDGDVYKYFSRNGYNYTDQFGASPTEGS 313

Query: 305 SDVIVENIIATR---CILDGEMLVWDKSLNRFAEFGSNQEIARAAKDGLDSDRQLCYVAF 364
               + N        CILDGEM+ ++ +   F + G+  +I R  +   DSD Q CY  F
Sbjct: 314 LTPFIHNAFKADIQICILDGEMMAYNPNTQTFMQKGTKFDIKRMVE---DSDLQTCYCVF 373

Query: 365 DVLYVGDTSVIHRSLKERHELLRDVVKPVKGRLEIL 378
           DVL V +  + H +L++R+E+L  +  P+ GR+EI+
Sbjct: 374 DVLMVNNKKLGHETLRKRYEILSSIFTPIPGRIEIV 403

[Close]

BLAST of Moc08g39510 vs. ExPASy Swiss-Prot
Match: Q90YB1 (DNA ligase 4 OS=Gallus gallus OX=9031 GN=LIG4 PE=2 SV=2)

HSP 1 Score: 231.1 bits (588), Expect = 2.3e-59
Identity = 139/396 (35.10%), Postives = 228/396 (57.58%), Query Frame = 0


Query: 5   INFNVLSTLFDWIQRSKSSAKKRSKFRKFLDTFCS------------SADYFSAIRLILP 64
           + F  L +  + IQ  KS  +K   F+ FLD++              +  ++ A+RLILP
Sbjct: 19  VPFADLCSTLERIQTCKSRPEKTKYFKDFLDSWRKFHSALHQKEKDVTDSFYPAMRLILP 78

Query: 65  TLDRERGTYGLKESVLATCLIDALGISRDSDDALRLNNWRKGGAKTGANAGNFALVAAEV 124
            L+RER  YG+KE++LA   I+ L + +D  DA++L N+R      G +AG+FA++A  V
Sbjct: 79  QLERERMAYGIKETMLAKLYIELLNLPKDGKDAVKLLNYRTPTGSRG-DAGDFAMIAYFV 138

Query: 125 LQRRQGMTPGGLTIKELNDLLDRLALSENRAEKTAVLSTLIQ---KTNAQEMKWIVMIIL 184
           L+ R     G LT++++N+LLD +A +     K  V  +L+Q   ++ A E KW++ +I+
Sbjct: 139 LKPRSPKR-GRLTVEQVNELLDAIANNNAAKNKGLVKKSLLQLITQSTALEQKWLIRMII 198

Query: 185 KDLKLGVSEKSIFHEFHPDAEDLFNVTCDLKLVCEKLRDRRKRHKRQDIEVGKAVRPQLA 244
           KDLKLGVS+++IF  FHPDA +L NVT DL+ VC +L D         I +  A +P LA
Sbjct: 199 KDLKLGVSQQTIFSIFHPDAAELHNVTTDLEKVCRQLHDPSVSLSDVSIMLFSAFKPMLA 258

Query: 245 SRVSNANAAWKKLHGKEVVVECKFDGDRIQIHKNGTEIHFFSRNFLDHS-EYGR----GM 304
           + +++     K+++ +   +E K DG+R+Q+HK+G    +FSRN  D++ ++G     G 
Sbjct: 259 A-IADVQQIEKQMNNQVFYIETKLDGERMQMHKDGDVYKYFSRNGFDYTQQFGASPVDGS 318

Query: 305 SDVIVENIIAT---RCILDGEMLVWDKSLNRFAEFGSNQEIARAAKDGLDSDRQLCYVAF 364
               + N+  +    CILDGEM+ ++     F + G+  +I R  +   DSD Q C+  F
Sbjct: 319 LTPFIHNVFKSDIQNCILDGEMMAYNPETQTFMQKGNKFDIKRMVE---DSDLQTCFCVF 378

Query: 365 DVLYVGDTSVIHRSLKERHELLRDVVKPVKGRLEIL 378
           DVL + D  + H SL +R+++L +V  P+ GR+ ++
Sbjct: 379 DVLMINDQKLAHESLSKRYKILSNVFTPLTGRIHVV 408

[Close]

BLAST of Moc08g39510 vs. ExPASy TrEMBL
Match: A0A6J1D6X8 (DNA ligase OS=Momordica charantia OX=3673 GN=LOC111018188 PE=3 SV=1)

HSP 1 Score: 826.6 bits (2134), Expect = 4.5e-236
Identity = 414/414 (100.00%), Postives = 414/414 (100.00%), Query Frame = 0


Query: 1   MTELINFNVLSTLFDWIQRSKSSAKKRSKFRKFLDTFCSSADYFSAIRLILPTLDRERGT 60
           MTELINFNVLSTLFDWIQRSKSSAKKRSKFRKFLDTFCSSADYFSAIRLILPTLDRERGT
Sbjct: 1   MTELINFNVLSTLFDWIQRSKSSAKKRSKFRKFLDTFCSSADYFSAIRLILPTLDRERGT 60

Query: 61  YGLKESVLATCLIDALGISRDSDDALRLNNWRKGGAKTGANAGNFALVAAEVLQRRQGMT 120
           YGLKESVLATCLIDALGISRDSDDALRLNNWRKGGAKTGANAGNFALVAAEVLQRRQGMT
Sbjct: 61  YGLKESVLATCLIDALGISRDSDDALRLNNWRKGGAKTGANAGNFALVAAEVLQRRQGMT 120

Query: 121 PGGLTIKELNDLLDRLALSENRAEKTAVLSTLIQKTNAQEMKWIVMIILKDLKLGVSEKS 180
           PGGLTIKELNDLLDRLALSENRAEKTAVLSTLIQKTNAQEMKWIVMIILKDLKLGVSEKS
Sbjct: 121 PGGLTIKELNDLLDRLALSENRAEKTAVLSTLIQKTNAQEMKWIVMIILKDLKLGVSEKS 180

Query: 181 IFHEFHPDAEDLFNVTCDLKLVCEKLRDRRKRHKRQDIEVGKAVRPQLASRVSNANAAWK 240
           IFHEFHPDAEDLFNVTCDLKLVCEKLRDRRKRHKRQDIEVGKAVRPQLASRVSNANAAWK
Sbjct: 181 IFHEFHPDAEDLFNVTCDLKLVCEKLRDRRKRHKRQDIEVGKAVRPQLASRVSNANAAWK 240

Query: 241 KLHGKEVVVECKFDGDRIQIHKNGTEIHFFSRNFLDHSEYGRGMSDVIVENIIATRCILD 300
           KLHGKEVVVECKFDGDRIQIHKNGTEIHFFSRNFLDHSEYGRGMSDVIVENIIATRCILD
Sbjct: 241 KLHGKEVVVECKFDGDRIQIHKNGTEIHFFSRNFLDHSEYGRGMSDVIVENIIATRCILD 300

Query: 301 GEMLVWDKSLNRFAEFGSNQEIARAAKDGLDSDRQLCYVAFDVLYVGDTSVIHRSLKERH 360
           GEMLVWDKSLNRFAEFGSNQEIARAAKDGLDSDRQLCYVAFDVLYVGDTSVIHRSLKERH
Sbjct: 301 GEMLVWDKSLNRFAEFGSNQEIARAAKDGLDSDRQLCYVAFDVLYVGDTSVIHRSLKERH 360

Query: 361 ELLRDVVKPVKGRLEILVPNGGLNSDCAGDPSWSQRAYNADDVERFFKNTIENR 415
           ELLRDVVKPVKGRLEILVPNGGLNSDCAGDPSWSQRAYNADDVERFFKNTIENR
Sbjct: 361 ELLRDVVKPVKGRLEILVPNGGLNSDCAGDPSWSQRAYNADDVERFFKNTIENR 414

[Close]

BLAST of Moc08g39510 vs. ExPASy TrEMBL
Match: A0A6J1D8A6 (DNA ligase OS=Momordica charantia OX=3673 GN=LOC111018188 PE=3 SV=1)

HSP 1 Score: 826.6 bits (2134), Expect = 4.5e-236
Identity = 414/414 (100.00%), Postives = 414/414 (100.00%), Query Frame = 0


Query: 1   MTELINFNVLSTLFDWIQRSKSSAKKRSKFRKFLDTFCSSADYFSAIRLILPTLDRERGT 60
           MTELINFNVLSTLFDWIQRSKSSAKKRSKFRKFLDTFCSSADYFSAIRLILPTLDRERGT
Sbjct: 1   MTELINFNVLSTLFDWIQRSKSSAKKRSKFRKFLDTFCSSADYFSAIRLILPTLDRERGT 60

Query: 61  YGLKESVLATCLIDALGISRDSDDALRLNNWRKGGAKTGANAGNFALVAAEVLQRRQGMT 120
           YGLKESVLATCLIDALGISRDSDDALRLNNWRKGGAKTGANAGNFALVAAEVLQRRQGMT
Sbjct: 61  YGLKESVLATCLIDALGISRDSDDALRLNNWRKGGAKTGANAGNFALVAAEVLQRRQGMT 120

Query: 121 PGGLTIKELNDLLDRLALSENRAEKTAVLSTLIQKTNAQEMKWIVMIILKDLKLGVSEKS 180
           PGGLTIKELNDLLDRLALSENRAEKTAVLSTLIQKTNAQEMKWIVMIILKDLKLGVSEKS
Sbjct: 121 PGGLTIKELNDLLDRLALSENRAEKTAVLSTLIQKTNAQEMKWIVMIILKDLKLGVSEKS 180

Query: 181 IFHEFHPDAEDLFNVTCDLKLVCEKLRDRRKRHKRQDIEVGKAVRPQLASRVSNANAAWK 240
           IFHEFHPDAEDLFNVTCDLKLVCEKLRDRRKRHKRQDIEVGKAVRPQLASRVSNANAAWK
Sbjct: 181 IFHEFHPDAEDLFNVTCDLKLVCEKLRDRRKRHKRQDIEVGKAVRPQLASRVSNANAAWK 240

Query: 241 KLHGKEVVVECKFDGDRIQIHKNGTEIHFFSRNFLDHSEYGRGMSDVIVENIIATRCILD 300
           KLHGKEVVVECKFDGDRIQIHKNGTEIHFFSRNFLDHSEYGRGMSDVIVENIIATRCILD
Sbjct: 241 KLHGKEVVVECKFDGDRIQIHKNGTEIHFFSRNFLDHSEYGRGMSDVIVENIIATRCILD 300

Query: 301 GEMLVWDKSLNRFAEFGSNQEIARAAKDGLDSDRQLCYVAFDVLYVGDTSVIHRSLKERH 360
           GEMLVWDKSLNRFAEFGSNQEIARAAKDGLDSDRQLCYVAFDVLYVGDTSVIHRSLKERH
Sbjct: 301 GEMLVWDKSLNRFAEFGSNQEIARAAKDGLDSDRQLCYVAFDVLYVGDTSVIHRSLKERH 360

Query: 361 ELLRDVVKPVKGRLEILVPNGGLNSDCAGDPSWSQRAYNADDVERFFKNTIENR 415
           ELLRDVVKPVKGRLEILVPNGGLNSDCAGDPSWSQRAYNADDVERFFKNTIENR
Sbjct: 361 ELLRDVVKPVKGRLEILVPNGGLNSDCAGDPSWSQRAYNADDVERFFKNTIENR 414

[Close]

BLAST of Moc08g39510 vs. ExPASy TrEMBL
Match: A0A6J1D7W8 (DNA ligase OS=Momordica charantia OX=3673 GN=LOC111018188 PE=3 SV=1)

HSP 1 Score: 822.0 bits (2122), Expect = 1.1e-234
Identity = 414/415 (99.76%), Postives = 414/415 (99.76%), Query Frame = 0


Query: 1   MTELINFNVLSTLFDWIQRSKSSAKKRSKFRKFLDTFCSSADYFSAIRLILPTLDRERGT 60
           MTELINFNVLSTLFDWIQRSKSSAKKRSKFRKFLDTFCSSADYFSAIRLILPTLDRERGT
Sbjct: 1   MTELINFNVLSTLFDWIQRSKSSAKKRSKFRKFLDTFCSSADYFSAIRLILPTLDRERGT 60

Query: 61  YGLKESVLATCLIDALGISRDSDDALRLNNWRKGGAKTGANAGNFALVAAEVLQRRQGMT 120
           YGLKESVLATCLIDALGISRDSDDALRLNNWRKGGAKTGANAGNFALVAAEVLQRRQGMT
Sbjct: 61  YGLKESVLATCLIDALGISRDSDDALRLNNWRKGGAKTGANAGNFALVAAEVLQRRQGMT 120

Query: 121 PGGLTIKELNDLLDRLALSEN-RAEKTAVLSTLIQKTNAQEMKWIVMIILKDLKLGVSEK 180
           PGGLTIKELNDLLDRLALSEN RAEKTAVLSTLIQKTNAQEMKWIVMIILKDLKLGVSEK
Sbjct: 121 PGGLTIKELNDLLDRLALSENSRAEKTAVLSTLIQKTNAQEMKWIVMIILKDLKLGVSEK 180

Query: 181 SIFHEFHPDAEDLFNVTCDLKLVCEKLRDRRKRHKRQDIEVGKAVRPQLASRVSNANAAW 240
           SIFHEFHPDAEDLFNVTCDLKLVCEKLRDRRKRHKRQDIEVGKAVRPQLASRVSNANAAW
Sbjct: 181 SIFHEFHPDAEDLFNVTCDLKLVCEKLRDRRKRHKRQDIEVGKAVRPQLASRVSNANAAW 240

Query: 241 KKLHGKEVVVECKFDGDRIQIHKNGTEIHFFSRNFLDHSEYGRGMSDVIVENIIATRCIL 300
           KKLHGKEVVVECKFDGDRIQIHKNGTEIHFFSRNFLDHSEYGRGMSDVIVENIIATRCIL
Sbjct: 241 KKLHGKEVVVECKFDGDRIQIHKNGTEIHFFSRNFLDHSEYGRGMSDVIVENIIATRCIL 300

Query: 301 DGEMLVWDKSLNRFAEFGSNQEIARAAKDGLDSDRQLCYVAFDVLYVGDTSVIHRSLKER 360
           DGEMLVWDKSLNRFAEFGSNQEIARAAKDGLDSDRQLCYVAFDVLYVGDTSVIHRSLKER
Sbjct: 301 DGEMLVWDKSLNRFAEFGSNQEIARAAKDGLDSDRQLCYVAFDVLYVGDTSVIHRSLKER 360

Query: 361 HELLRDVVKPVKGRLEILVPNGGLNSDCAGDPSWSQRAYNADDVERFFKNTIENR 415
           HELLRDVVKPVKGRLEILVPNGGLNSDCAGDPSWSQRAYNADDVERFFKNTIENR
Sbjct: 361 HELLRDVVKPVKGRLEILVPNGGLNSDCAGDPSWSQRAYNADDVERFFKNTIENR 415

[Close]

BLAST of Moc08g39510 vs. ExPASy TrEMBL
Match: A0A6J1D959 (DNA ligase OS=Momordica charantia OX=3673 GN=LOC111018188 PE=3 SV=1)

HSP 1 Score: 822.0 bits (2122), Expect = 1.1e-234
Identity = 414/415 (99.76%), Postives = 414/415 (99.76%), Query Frame = 0


Query: 1   MTELINFNVLSTLFDWIQRSKSSAKKRSKFRKFLDTFCSSADYFSAIRLILPTLDRERGT 60
           MTELINFNVLSTLFDWIQRSKSSAKKRSKFRKFLDTFCSSADYFSAIRLILPTLDRERGT
Sbjct: 1   MTELINFNVLSTLFDWIQRSKSSAKKRSKFRKFLDTFCSSADYFSAIRLILPTLDRERGT 60

Query: 61  YGLKESVLATCLIDALGISRDSDDALRLNNWRKGGAKTGANAGNFALVAAEVLQRRQGMT 120
           YGLKESVLATCLIDALGISRDSDDALRLNNWRKGGAKTGANAGNFALVAAEVLQRRQGMT
Sbjct: 61  YGLKESVLATCLIDALGISRDSDDALRLNNWRKGGAKTGANAGNFALVAAEVLQRRQGMT 120

Query: 121 PGGLTIKELNDLLDRLALSEN-RAEKTAVLSTLIQKTNAQEMKWIVMIILKDLKLGVSEK 180
           PGGLTIKELNDLLDRLALSEN RAEKTAVLSTLIQKTNAQEMKWIVMIILKDLKLGVSEK
Sbjct: 121 PGGLTIKELNDLLDRLALSENSRAEKTAVLSTLIQKTNAQEMKWIVMIILKDLKLGVSEK 180

Query: 181 SIFHEFHPDAEDLFNVTCDLKLVCEKLRDRRKRHKRQDIEVGKAVRPQLASRVSNANAAW 240
           SIFHEFHPDAEDLFNVTCDLKLVCEKLRDRRKRHKRQDIEVGKAVRPQLASRVSNANAAW
Sbjct: 181 SIFHEFHPDAEDLFNVTCDLKLVCEKLRDRRKRHKRQDIEVGKAVRPQLASRVSNANAAW 240

Query: 241 KKLHGKEVVVECKFDGDRIQIHKNGTEIHFFSRNFLDHSEYGRGMSDVIVENIIATRCIL 300
           KKLHGKEVVVECKFDGDRIQIHKNGTEIHFFSRNFLDHSEYGRGMSDVIVENIIATRCIL
Sbjct: 241 KKLHGKEVVVECKFDGDRIQIHKNGTEIHFFSRNFLDHSEYGRGMSDVIVENIIATRCIL 300

Query: 301 DGEMLVWDKSLNRFAEFGSNQEIARAAKDGLDSDRQLCYVAFDVLYVGDTSVIHRSLKER 360
           DGEMLVWDKSLNRFAEFGSNQEIARAAKDGLDSDRQLCYVAFDVLYVGDTSVIHRSLKER
Sbjct: 301 DGEMLVWDKSLNRFAEFGSNQEIARAAKDGLDSDRQLCYVAFDVLYVGDTSVIHRSLKER 360

Query: 361 HELLRDVVKPVKGRLEILVPNGGLNSDCAGDPSWSQRAYNADDVERFFKNTIENR 415
           HELLRDVVKPVKGRLEILVPNGGLNSDCAGDPSWSQRAYNADDVERFFKNTIENR
Sbjct: 361 HELLRDVVKPVKGRLEILVPNGGLNSDCAGDPSWSQRAYNADDVERFFKNTIENR 415

[Close]

BLAST of Moc08g39510 vs. ExPASy TrEMBL
Match: A0A6J1ENX2 (DNA ligase OS=Cucurbita moschata OX=3662 GN=LOC111436208 PE=3 SV=1)

HSP 1 Score: 786.6 bits (2030), Expect = 5.2e-224
Identity = 390/414 (94.20%), Postives = 405/414 (97.83%), Query Frame = 0


Query: 1   MTELINFNVLSTLFDWIQRSKSSAKKRSKFRKFLDTFCSSADYFSAIRLILPTLDRERGT 60
           MTELI F+VLS+LFDWIQRSKSSAKKRSKFRKF+DTFCS ADYFSAIRLILP+LDRERGT
Sbjct: 1   MTELIKFSVLSSLFDWIQRSKSSAKKRSKFRKFIDTFCSPADYFSAIRLILPSLDRERGT 60

Query: 61  YGLKESVLATCLIDALGISRDSDDALRLNNWRKGGAKTGANAGNFALVAAEVLQRRQGMT 120
           YGLKESVLATCLIDALG+SR+S+DALRL NWRKGGAKTGAN GNFALVAAEVLQRRQGMT
Sbjct: 61  YGLKESVLATCLIDALGMSRESEDALRLINWRKGGAKTGANVGNFALVAAEVLQRRQGMT 120

Query: 121 PGGLTIKELNDLLDRLALSENRAEKTAVLSTLIQKTNAQEMKWIVMIILKDLKLGVSEKS 180
           PGGL IKELNDLLDRLALSENRAEKTAVLSTLIQKTNAQEMKWIVMIILKDLKLGVSEKS
Sbjct: 121 PGGLLIKELNDLLDRLALSENRAEKTAVLSTLIQKTNAQEMKWIVMIILKDLKLGVSEKS 180

Query: 181 IFHEFHPDAEDLFNVTCDLKLVCEKLRDRRKRHKRQDIEVGKAVRPQLASRVSNANAAWK 240
           IFHEFHPDAEDLFNVTCDLKLVCEKLRDRR+RHKRQDIEVGKAVRPQLASRVSNANAAWK
Sbjct: 181 IFHEFHPDAEDLFNVTCDLKLVCEKLRDRRQRHKRQDIEVGKAVRPQLASRVSNANAAWK 240

Query: 241 KLHGKEVVVECKFDGDRIQIHKNGTEIHFFSRNFLDHSEYGRGMSDVIVENIIATRCILD 300
           KLHGKEVVVECKFDGDRIQIHKNGTEIH+FSRNFLDHSEYG GMSDVIV+N++ATRCILD
Sbjct: 241 KLHGKEVVVECKFDGDRIQIHKNGTEIHYFSRNFLDHSEYGHGMSDVIVQNVLATRCILD 300

Query: 301 GEMLVWDKSLNRFAEFGSNQEIARAAKDGLDSDRQLCYVAFDVLYVGDTSVIHRSLKERH 360
           GEMLVWDKSLNRFAEFGSNQEIARAAKDG DS+RQLCYVAFDVLYVGDTSVIHRSLKERH
Sbjct: 301 GEMLVWDKSLNRFAEFGSNQEIARAAKDGFDSNRQLCYVAFDVLYVGDTSVIHRSLKERH 360

Query: 361 ELLRDVVKPVKGRLEILVPNGGLNSDCAGDPSWSQRAYNADDVERFFKNTIENR 415
           ELLRDVVKPVKG+LEILVPNGGLNSDCAGDPSWS RAYN DDVERFFK+TIENR
Sbjct: 361 ELLRDVVKPVKGQLEILVPNGGLNSDCAGDPSWSIRAYNVDDVERFFKSTIENR 414

[Close]

BLAST of Moc08g39510 vs. TAIR 10
Match: AT5G57160.1 (DNA ligase IV )

HSP 1 Score: 678.3 bits (1749), Expect = 3.8e-195
Identity = 334/416 (80.29%), Postives = 376/416 (90.38%), Query Frame = 0


Query: 1   MTELINFNVLSTLFDWIQRSKSSAKKRSKFRKFLDTFCSSADYFSAIRLILPTLDRERGT 60
           MTE I F+VL +LF+WIQ+SK+S++KRSKFRKFLDT+C  +DYF A+RLI+P+LDRERG+
Sbjct: 1   MTEEIKFSVLVSLFNWIQKSKTSSQKRSKFRKFLDTYCKPSDYFVAVRLIIPSLDRERGS 60

Query: 61  YGLKESVLATCLIDALGISRDSDDALRLNNWRKGG-AKTGANAGNFALVAAEVLQRRQGM 120
           YGLKESVLATCLIDALGISRD+ DA+RL NWRKGG AK GANAGNF+L+AAEVLQRRQGM
Sbjct: 61  YGLKESVLATCLIDALGISRDAPDAVRLLNWRKGGTAKAGANAGNFSLIAAEVLQRRQGM 120

Query: 121 TPGGLTIKELNDLLDRLALSENRAEKTAVLSTLIQKTNAQEMKWIVMIILKDLKLGVSEK 180
             GGLTIKELNDLLDRLA SENRAEKT VLSTLIQKTNAQEMKW++ IILKDLKLG+SEK
Sbjct: 121 ASGGLTIKELNDLLDRLASSENRAEKTLVLSTLIQKTNAQEMKWVIRIILKDLKLGMSEK 180

Query: 181 SIFHEFHPDAEDLFNVTCDLKLVCEKLRDRRKRHKRQDIEVGKAVRPQLASRVSNANAAW 240
           SIF EFHPDAEDLFNVTCDLKLVCEKLRDR +RHKRQDIEVGKAVRPQLA R+ + NAAW
Sbjct: 181 SIFQEFHPDAEDLFNVTCDLKLVCEKLRDRHQRHKRQDIEVGKAVRPQLAMRIGDVNAAW 240

Query: 241 KKLHGKEVVVECKFDGDRIQIHKNGTEIHFFSRNFLDHSEYGRGMSDVIVENIIATRCIL 300
           KKLHGK+VV ECKFDGDRIQIHKNGT+IH+FSRNFLDHSEY   MSD+IV+NI+  +CIL
Sbjct: 241 KKLHGKDVVAECKFDGDRIQIHKNGTDIHYFSRNFLDHSEYAHAMSDLIVQNILVDKCIL 300

Query: 301 DGEMLVWDKSLNRFAEFGSNQEIARAAKDGLDSDRQLCYVAFDVLYVGDTSVIHRSLKER 360
           DGEMLVWD SLNRFAEFGSNQEIA+AA++GLDS +QLCYVAFDVLYVGDTSVIH+SLKER
Sbjct: 301 DGEMLVWDTSLNRFAEFGSNQEIAKAAREGLDSHKQLCYVAFDVLYVGDTSVIHQSLKER 360

Query: 361 HELLRDVVKPVKGRLEILVPNGGLN-SDCAGDPSWSQRAYNADDVERFFKNTIENR 415
           HELL+ VVKP+KGRLE+LVP GGLN    +G+PSWS   + A DVERFFK T+ENR
Sbjct: 361 HELLKKVVKPLKGRLEVLVPEGGLNVHRPSGEPSWSIVVHAAADVERFFKETVENR 416

[Close]

BLAST of Moc08g39510 vs. TAIR 10
Match: AT1G66730.1 (DNA LIGASE 6 )

HSP 1 Score: 56.6 bits (135), Expect = 5.5e-08
Identity = 48/187 (25.67%), Postives = 83/187 (44.39%), Query Frame = 0


Query: 191  DLFNVTCDLKLVCEKLRDRRKRHKRQDIEV--GKAVRPQLASRVSNANAAWKKLHGKEVV 250
            + +N+   L +V   L D+        + +  G  ++P LA         +     K   
Sbjct: 976  EAYNILPSLDVVVPSLMDKDIEFSTSTLSMVPGIPIKPMLAKIAKGVQEFFNLSQEKAFT 1035

Query: 251  VECKFDGDRIQIHK--NGTEIHFFSRNFLDHSEYGRGMSDVIVENI--IATRCILDGEML 310
             E K+DG R QIHK  +GT +  FSRN  + +     + DVI +     A   +LD E++
Sbjct: 1036 CEYKYDGQRAQIHKLLDGT-VCIFSRNGDETTSRFPDLVDVIKQFSCPAAETFMLDAEVV 1095

Query: 311  VWDK-SLNRFAEFGSNQEIARAAKDGLDSDR----QLCYVAFDVLYVGDTSVIHRSLKER 367
              D+ + N+   F       R +KD L +      ++C   FD+++V    ++   L+ER
Sbjct: 1096 ATDRINGNKLMSFQELSTRERGSKDALITTESIKVEVCVFVFDIMFVNGEQLLALPLRER 1155

[Close]

BLAST of Moc08g39510 vs. TAIR 10
Match: AT1G49250.1 (ATP-dependent DNA ligase )

HSP 1 Score: 54.3 bits (129), Expect = 2.7e-07
Identity = 48/162 (29.63%), Postives = 76/162 (46.91%), Query Frame = 0


Query: 214 KRQDIEVGKAVRPQLASRVSNANAAWKKLHGKEVVVECKFDGDRIQIH--KNGTEIHFFS 273
           K  ++ +G  VRP LA   +  +   +K        E K+DG+R QI+  ++GT +  FS
Sbjct: 275 KTCNLTLGVPVRPMLAKATTRVDLILEKFKDTVFTAEYKYDGERAQIYYMEDGT-VEIFS 334

Query: 274 RNFLDHSEYGRG-MSDVI-----VENIIATRCILDGEMLVWDKSLNRFAEFGSNQEIARA 333
           R    H+E   G   DV      ++       ILD E++ +++   +     S     RA
Sbjct: 335 R----HAERNTGKYPDVALVLSRLKKPTVKSFILDCEVVTFNREKEKILPLQS----TRA 394

Query: 334 AKDGLDSDRQ--LCYVAFDVLYVGDTSVIHRSLKERHELLRD 366
            K+   SD +  +C  AFD+LY+    +IH +L  R E L D
Sbjct: 395 HKNVNVSDIKVGVCVFAFDILYLNGQLLIHENLNIRREKLHD 427

The following BLAST results are available for this feature:

BLAST of Moc08g39510 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022149864.1	9.3e-236	100.00	DNA ligase 4 isoform X3 [Momordica charantia]	[more]
XP_022149865.1	9.3e-236	100.00	DNA ligase 4 isoform X4 [Momordica charantia]	[more]
XP_022149862.1	2.3e-234	99.76	DNA ligase 4 isoform X1 [Momordica charantia]	[more]
XP_022149863.1	2.3e-234	99.76	DNA ligase 4 isoform X2 [Momordica charantia]	[more]
XP_022929706.1	1.1e-223	94.20	DNA ligase 4 [Cucurbita moschata] >XP_022929708.1 DNA ligase 4 [Cucurbita moscha...	[more]

BLAST of Moc08g39510 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LL84	5.4e-194	80.29	DNA ligase 4 OS=Arabidopsis thaliana OX=3702 GN=LIG4 PE=1 SV=1	[more]
Q7X7E9	9.9e-164	64.15	Putative DNA ligase 4 OS=Oryza sativa subsp. japonica OX=39947 GN=LIG4 PE=2 SV=2	[more]
Q5R6L3	1.9e-61	36.87	DNA ligase 4 OS=Pongo abelii OX=9601 GN=DNL4 PE=2 SV=1	[more]
P49917	7.1e-61	36.62	DNA ligase 4 OS=Homo sapiens OX=9606 GN=LIG4 PE=1 SV=2	[more]
Q90YB1	2.3e-59	35.10	DNA ligase 4 OS=Gallus gallus OX=9031 GN=LIG4 PE=2 SV=2	[more]

BLAST of Moc08g39510 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D6X8	4.5e-236	100.00	DNA ligase OS=Momordica charantia OX=3673 GN=LOC111018188 PE=3 SV=1	[more]
A0A6J1D8A6	4.5e-236	100.00	DNA ligase OS=Momordica charantia OX=3673 GN=LOC111018188 PE=3 SV=1	[more]
A0A6J1D7W8	1.1e-234	99.76	DNA ligase OS=Momordica charantia OX=3673 GN=LOC111018188 PE=3 SV=1	[more]
A0A6J1D959	1.1e-234	99.76	DNA ligase OS=Momordica charantia OX=3673 GN=LOC111018188 PE=3 SV=1	[more]
A0A6J1ENX2	5.2e-224	94.20	DNA ligase OS=Cucurbita moschata OX=3662 GN=LOC111436208 PE=3 SV=1	[more]

BLAST of Moc08g39510 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G57160.1	3.8e-195	80.29	DNA ligase IV	[more]
AT1G66730.1	5.5e-08	25.67	DNA LIGASE 6	[more]
AT1G49250.1	2.7e-07	29.63	ATP-dependent DNA ligase	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 126..146
None	No IPR available	GENE3D	3.30.470.30	DNA ligase/mRNA capping enzyme	coord: 220..414 e-value: 2.2E-48 score: 166.7
None	No IPR available	SUPERFAMILY	56091	DNA ligase/mRNA capping enzyme, catalytic domain	coord: 185..374
IPR012310	DNA ligase, ATP-dependent, central	PFAM	PF01068	DNA_ligase_A_M	coord: 226..377 e-value: 1.1E-31 score: 110.1
IPR012310	DNA ligase, ATP-dependent, central	PROSITE	PS50160	DNA_LIGASE_A3	coord: 329..414 score: 10.432468
IPR036599	DNA ligase, ATP-dependent, N-terminal domain superfamily	GENE3D	1.10.3260.10		coord: 1..218 e-value: 2.3E-69 score: 235.6
IPR036599	DNA ligase, ATP-dependent, N-terminal domain superfamily	SUPERFAMILY	117018	ATP-dependent DNA ligase DNA-binding domain	coord: 5..208
IPR012308	DNA ligase, ATP-dependent, N-terminal	PFAM	PF04675	DNA_ligase_A_N	coord: 7..186 e-value: 1.8E-38 score: 132.6
IPR000977	DNA ligase, ATP-dependent	TIGRFAM	TIGR00574	TIGR00574	coord: 61..378 e-value: 6.6E-66 score: 221.0
IPR029710	DNA ligase 4	PANTHER	PTHR45997	DNA LIGASE 4	coord: 3..414
IPR016059	DNA ligase, ATP-dependent, conserved site	PROSITE	PS00697	DNA_LIGASE_A1	coord: 250..258
IPR044125	DNA Ligase 4, adenylation domain	CDD	cd07903	Adenylation_DNA_ligase_IV	coord: 214..414 e-value: 1.74116E-69 score: 217.061

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc08g39510.1	Moc08g39510.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071897	DNA biosynthetic process
biological_process	GO:0051103	DNA ligation involved in DNA repair
biological_process	GO:0006310	DNA recombination
biological_process	GO:0006260	DNA replication
biological_process	GO:0006303	double-strand break repair via nonhomologous end joining
biological_process	GO:0006297	nucleotide-excision repair, DNA gap filling
biological_process	GO:0010165	response to X-ray
biological_process	GO:0006281	DNA repair
cellular_component	GO:0032807	DNA ligase IV complex
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003910	DNA ligase (ATP) activity
molecular_function	GO:0003909	DNA ligase activity