Moc08g39270 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc08g39270
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	prefoldin subunit 1
Location	chr8: 29739098 .. 29741433 (-)
RNA-Seq Expression	Moc08g39270
Synteny	Moc08g39270

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGACGAGGCCAACAGAATTGTGAGCATTTTTACTCTTTTAATCTTGTTTTTCCCCTTCATCACTCGCATTTTACTGATGCCCGAGCTCTTGTTTTCTTTCTGGAATCATAGGCTTTCTTGGAAATTCAAGGTCGCATGATCGAGGTGACTGGAAAGCTGAAGCAGGTACTTCCCTTTCATTTCTTGGACTTATTGGGAATGATTTAATTTAATGTTTTCTGAACTTGTAGAAGTGAAAGATTTTTGTAATTGTTGCCTGGATTGATCTGATACGTGTTGTGTAGACGATGAAAAGTTATTGGAAATGAATGAATGTTTCCCAGGTCAATTAATGTAGCTGATGAATGCTGGTTCTTTTGTTTCTTATATATTCATTTGTTGTTTACTTCGTTTTCTTTTTTTAATTCTTTTGGAAGTTTGTTATTATCTTGCTGCTTGTTAAGAAAGTATGTTGACTTGTTTGGTTATTTTTCTGTTTTCTAATCAATTTGGTCTTTATAATGAATCCGAAAATTGAAGAAAAGAGAGAGAATAAGTAGTCGTGGTGATAGTTGTAGTAATTAATGGAACGAAAAGACTCCAGAAGAAAAAAGATTAAGAGAATTTTTCTGCGCCTTCTGTATGATAGCTAGTTCTTTTAGATGTCTCCTGGGTCTAGGCCTTGGAGTGGGTACAAGTGCCCTTGGATATAGGAGAGCAAAGCTCCGACTCCAAATTATAAAAAATGATGATAGCTAGCTCTTTTATTCGTGCTAGAGCATCTGCCAAGGTCATATAGACCAAATTTACCTGCTATGTCCTTATGGCATGAGGCATTAGGTTCTTGAGAGAACTTCTAAGTTCTAAAGCCTTTTTGAAACTAGAGCATTGCCAATCCCAAGGCCCACTTCCCCTGCACATGTGAATCTCTTTCCCACTGAACTCCCATTTCTCTAGAGATATTTATACTTTGAATCGTGTGATCATTCTCATGAACTCATCAGTGATAATTCTTCTTATTTGGTCATTTTATCCCCTCTATCTTCACAAGTTGCATTTGAGTTCCTAGAGTCTAAACTGTTGGTTACACAATTTATATGATATACAAAATTTACAATTATACAATTTACACTTTTTTATCAACCATGTGTTGAATCTACAGAATAATGGTCAGTATTATTGTAACTCGAGTAGTTGATAGTAAAATGTAATAAACGTGGATTTCGAATGTGTTTGGTGTGAGGTTCGAGGGATGATATATTTGTGGAGATCGAGACCTTATTTTCATCGTTGACGGCATAATACTTATGCAAATCTGACATTTTCTTTATCAGTCTTGCATCAAAGCTGTTATATTTTATTGAAATTACGTATGAAAAAACACATGTAAGTCTCTTTGTCAAGCTCTCTAACTAAAGTTAGTTTTGAAATGTCAAGGACATAATATTTAGTGTTGAAGTTAAGGTAAGCCCTCAAAATCTCAGTATTTAGTTTCTGGACAAATTCAGTTCTTCAATGCGTCACTTCATGTGAACGGAGCATTCTTGACTTTAAAAGCAAAGCCTGGTTTTACCTTGTTTTTCAGGTGCAGACCCAGATACGAAACAAGGAGGGTGAAAAGAAGCGTGCTTTCTTAACCTTGGAGGAACTTCGACAGTTGTCTGAAGACACTAATGCTTACAAATCTATAGGTACTTAACAACGCGTTATTGTTTAACTAGAAGGTTGTTCACTCTTTGCCTAAATCATGGTTAGCCAAAGGTGTTTTAAGTTTTCAACTTTTCCATGTTGAGTTTATTTACCACTGATTTTCTGCCCTCATTCTTATGGTGCAGGGAGAACGTGAGTGATGCTACAATTATCCAAACGACTTAAAGTTAGATTTTATTTTTTATTTCTCATATTACACAGATGAAACTCTCTTACTTTGTGCTGTCTATTTCTTGTTTCTATATCGTGCTGACCAGGTTTGTTCTAGAGCCAAAGTCAGTTTTAATGAATGAACAGGAGCAGAAGCTAAAGGATAGTGAAGCTGCAATCGCCTCACTGCAGGTACATATCTCTTTCCTCTGCAGGGACAAGAAATCTTCCTTTGAACTTCTCACCTTTTCTTGAAAGATTTACATTTGCATGCATATATCAGAAGTCAGCACATTTGCCTTCGCTTGTTATAGTTTTGTATTGGCTCTTTTCTTCTTCCTCCCTTCACGAAGACGAATTCCATAATCATTTTTGCAGACATCAAAGGAGTATTTAGAGAAGCAAATGGCGGAGGTGGAGAACAACTTGAGGGAGCTGTTGCAACAAGATCCAGGTATTGCTCGCCAGATAATGTCCATGTCTGTAGCATAA

mRNA sequence

ATGGCGGACGAGGCCAACAGAATTGCTTTCTTGGAAATTCAAGGTCGCATGATCGAGGTGACTGGAAAGCTGAAGCAGGTGCAGACCCAGATACGAAACAAGGAGGGTGAAAAGAAGCGTGCTTTCTTAACCTTGGAGGAACTTCGACAGTTGTCTGAAGACACTAATGCTTACAAATCTATAGGGAGAACGTTTGTTCTAGAGCCAAAGTCAGTTTTAATGAATGAACAGGAGCAGAAGCTAAAGGATAGTGAAGCTGCAATCGCCTCACTGCAGACATCAAAGGAGTATTTAGAGAAGCAAATGGCGGAGGTGGAGAACAACTTGAGGGAGCTGTTGCAACAAGATCCAGGTATTGCTCGCCAGATAATGTCCATGTCTGTAGCATAA

Coding sequence (CDS)

ATGGCGGACGAGGCCAACAGAATTGCTTTCTTGGAAATTCAAGGTCGCATGATCGAGGTGACTGGAAAGCTGAAGCAGGTGCAGACCCAGATACGAAACAAGGAGGGTGAAAAGAAGCGTGCTTTCTTAACCTTGGAGGAACTTCGACAGTTGTCTGAAGACACTAATGCTTACAAATCTATAGGGAGAACGTTTGTTCTAGAGCCAAAGTCAGTTTTAATGAATGAACAGGAGCAGAAGCTAAAGGATAGTGAAGCTGCAATCGCCTCACTGCAGACATCAAAGGAGTATTTAGAGAAGCAAATGGCGGAGGTGGAGAACAACTTGAGGGAGCTGTTGCAACAAGATCCAGGTATTGCTCGCCAGATAATGTCCATGTCTGTAGCATAA

Protein sequence

MADEANRIAFLEIQGRMIEVTGKLKQVQTQIRNKEGEKKRAFLTLEELRQLSEDTNAYKSIGRTFVLEPKSVLMNEQEQKLKDSEAAIASLQTSKEYLEKQMAEVENNLRELLQQDPGIARQIMSMSVA

Homology

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BLAST of Moc08g39270 vs. NCBI nr
Match: XP_022149806.1 (prefoldin subunit 1 [Momordica charantia])

HSP 1 Score: 238.4 bits (607), Expect = 3.4e-59
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0


Query: 1   MADEANRIAFLEIQGRMIEVTGKLKQVQTQIRNKEGEKKRAFLTLEELRQLSEDTNAYKS 60
           MADEANRIAFLEIQGRMIEVTGKLKQVQTQIRNKEGEKKRAFLTLEELRQLSEDTNAYKS
Sbjct: 1   MADEANRIAFLEIQGRMIEVTGKLKQVQTQIRNKEGEKKRAFLTLEELRQLSEDTNAYKS 60

Query: 61  IGRTFVLEPKSVLMNEQEQKLKDSEAAIASLQTSKEYLEKQMAEVENNLRELLQQDPGIA 120
           IGRTFVLEPKSVLMNEQEQKLKDSEAAIASLQTSKEYLEKQMAEVENNLRELLQQDPGIA
Sbjct: 61  IGRTFVLEPKSVLMNEQEQKLKDSEAAIASLQTSKEYLEKQMAEVENNLRELLQQDPGIA 120

Query: 121 RQIMSMSVA 130
           RQIMSMSVA
Sbjct: 121 RQIMSMSVA 129

[Close]

BLAST of Moc08g39270 vs. NCBI nr
Match: XP_022929581.1 (prefoldin subunit 1-like [Cucurbita moschata])

HSP 1 Score: 223.8 bits (569), Expect = 8.6e-55
Identity = 118/129 (91.47%), Postives = 125/129 (96.90%), Query Frame = 0


Query: 1   MADEANRIAFLEIQGRMIEVTGKLKQVQTQIRNKEGEKKRAFLTLEELRQLSEDTNAYKS 60
           MAD+ANR  FLEIQGRMIE+TGKLKQVQTQIRNKEGEKKRAFLTLEEL+QLS+DTNAYKS
Sbjct: 1   MADDANRATFLEIQGRMIEITGKLKQVQTQIRNKEGEKKRAFLTLEELKQLSDDTNAYKS 60

Query: 61  IGRTFVLEPKSVLMNEQEQKLKDSEAAIASLQTSKEYLEKQMAEVENNLRELLQQDPGIA 120
           IGRTFVLEPKSVLMNEQEQKLKDSEAAI SL +SKEYLEKQ+AEVENNLRELLQQDPGIA
Sbjct: 61  IGRTFVLEPKSVLMNEQEQKLKDSEAAIGSLHSSKEYLEKQLAEVENNLRELLQQDPGIA 120

Query: 121 RQIMSMSVA 130
           RQIMSMS+A
Sbjct: 121 RQIMSMSLA 129

[Close]

BLAST of Moc08g39270 vs. NCBI nr
Match: XP_023546624.1 (prefoldin subunit 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 222.6 bits (566), Expect = 1.9e-54
Identity = 118/129 (91.47%), Postives = 124/129 (96.12%), Query Frame = 0


Query: 1   MADEANRIAFLEIQGRMIEVTGKLKQVQTQIRNKEGEKKRAFLTLEELRQLSEDTNAYKS 60
           MAD+ANR  FLEIQGRMIE+TGKLKQVQTQIRNKEGEKKRAFLTLEEL+QLS+DTNAYKS
Sbjct: 1   MADDANRATFLEIQGRMIEITGKLKQVQTQIRNKEGEKKRAFLTLEELKQLSDDTNAYKS 60

Query: 61  IGRTFVLEPKSVLMNEQEQKLKDSEAAIASLQTSKEYLEKQMAEVENNLRELLQQDPGIA 120
           IGRTFVLEPKSVLMNEQEQKLKDSEA I SL +SKEYLEKQ+AEVENNLRELLQQDPGIA
Sbjct: 61  IGRTFVLEPKSVLMNEQEQKLKDSEATIDSLHSSKEYLEKQLAEVENNLRELLQQDPGIA 120

Query: 121 RQIMSMSVA 130
           RQIMSMSVA
Sbjct: 121 RQIMSMSVA 129

[Close]

BLAST of Moc08g39270 vs. NCBI nr
Match: RWR82635.1 (prefoldin subunit 1 [Cinnamomum micranthum f. kanehirae])

HSP 1 Score: 222.6 bits (566), Expect = 1.9e-54
Identity = 116/129 (89.92%), Postives = 125/129 (96.90%), Query Frame = 0


Query: 1   MADEANRIAFLEIQGRMIEVTGKLKQVQTQIRNKEGEKKRAFLTLEELRQLSEDTNAYKS 60
           MADEANR AFLEIQGRMIE+TGKLKQVQTQIRNKEGEKKRA+LTLEELRQLS+DTN YKS
Sbjct: 1   MADEANRTAFLEIQGRMIEITGKLKQVQTQIRNKEGEKKRAYLTLEELRQLSDDTNTYKS 60

Query: 61  IGRTFVLEPKSVLMNEQEQKLKDSEAAIASLQTSKEYLEKQMAEVENNLRELLQQDPGIA 120
           IG+ FVLEPKSVL+NEQEQKLKDSEAAIASLQTSKEYLEKQMAE+ENNLRELLQQDPG+A
Sbjct: 61  IGKAFVLEPKSVLVNEQEQKLKDSEAAIASLQTSKEYLEKQMAEIENNLRELLQQDPGLA 120

Query: 121 RQIMSMSVA 130
           RQIMS+S +
Sbjct: 121 RQIMSLSTS 129

[Close]

BLAST of Moc08g39270 vs. NCBI nr
Match: KAF3437262.1 (hypothetical protein FNV43_RR20015 [Rhamnella rubrinervis])

HSP 1 Score: 222.2 bits (565), Expect = 2.5e-54
Identity = 117/128 (91.41%), Postives = 123/128 (96.09%), Query Frame = 0


Query: 1   MADEANRIAFLEIQGRMIEVTGKLKQVQTQIRNKEGEKKRAFLTLEELRQLSEDTNAYKS 60
           MAD+ NR AFLEIQGRMIE+TGKLKQVQTQ+RNKEGEKKRAFLTLEELRQLS+DTN YKS
Sbjct: 39  MADDTNRTAFLEIQGRMIEITGKLKQVQTQMRNKEGEKKRAFLTLEELRQLSDDTNTYKS 98

Query: 61  IGRTFVLEPKSVLMNEQEQKLKDSEAAIASLQTSKEYLEKQMAEVENNLRELLQQDPGIA 120
           +GRTFVLEPKS LMNEQEQKLKDSEAAIASLQTSKEYLEKQMAEVENNLRELL QDPG+A
Sbjct: 99  VGRTFVLEPKSDLMNEQEQKLKDSEAAIASLQTSKEYLEKQMAEVENNLRELLNQDPGLA 158

Query: 121 RQIMSMSV 129
           RQIMSMSV
Sbjct: 159 RQIMSMSV 166

[Close]

BLAST of Moc08g39270 vs. ExPASy Swiss-Prot
Match: Q3SZE2 (Prefoldin subunit 1 OS=Bos taurus OX=9913 GN=PFDN1 PE=2 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 8.5e-13
Identity = 40/105 (38.10%), Postives = 62/105 (59.05%), Query Frame = 0


Query: 9   AFLEIQGRMIEVTGKLKQVQTQIRNKEGEKKRAFLTLEELRQLSEDTNAYKSIGRTFVLE 68
           AF E+Q ++I+   K+K    QI      KK A LT  E+  L ++TN Y+ +GR F+L+
Sbjct: 12  AFTELQAKVIDTQQKVKLADVQIEQLNRTKKHAHLTDTEIMTLVDETNMYEGVGRMFILQ 71

Query: 69  PKSVLMNEQEQKLKDSEAAIASLQTSKEYLEKQMAEVENNLRELL 114
            K  + N+  +K K +E  I  L+  K YLE+ + E E+N+RE+L
Sbjct: 72  SKEAIHNQLLEKQKIAEEKIKELEQKKSYLERSVKEAEDNIREML 116

[Close]

BLAST of Moc08g39270 vs. ExPASy Swiss-Prot
Match: Q9CWM4 (Prefoldin subunit 1 OS=Mus musculus OX=10090 GN=Pfdn1 PE=1 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.1e-12
Identity = 40/105 (38.10%), Postives = 63/105 (60.00%), Query Frame = 0


Query: 9   AFLEIQGRMIEVTGKLKQVQTQIRNKEGEKKRAFLTLEELRQLSEDTNAYKSIGRTFVLE 68
           AF E+Q ++I+   K+K    QI      KK A LT  E+  L ++TN Y+ +GR F+L+
Sbjct: 12  AFTELQAKVIDTQQKVKLADIQIEQLNRTKKHAHLTDTEIMTLVDETNMYEGVGRMFILQ 71

Query: 69  PKSVLMNEQEQKLKDSEAAIASLQTSKEYLEKQMAEVENNLRELL 114
            K V+ N+  +K K ++  I  L+  K YLE+ + E E+N+RE+L
Sbjct: 72  SKEVIHNQLLEKQKIAKEKIKELEQKKSYLERSVKEAEDNIREML 116

[Close]

BLAST of Moc08g39270 vs. ExPASy Swiss-Prot
Match: Q5RAM7 (Prefoldin subunit 1 OS=Pongo abelii OX=9601 GN=PFDN1 PE=2 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.1e-12
Identity = 40/105 (38.10%), Postives = 62/105 (59.05%), Query Frame = 0


Query: 9   AFLEIQGRMIEVTGKLKQVQTQIRNKEGEKKRAFLTLEELRQLSEDTNAYKSIGRTFVLE 68
           AF E+Q ++I+   K+K    QI      KK A LT  E+  L ++TN Y+ +GR F+L+
Sbjct: 12  AFTELQAKVIDTQQKVKLADIQIEQLNRTKKHAHLTDTEIMTLVDETNMYEGVGRMFILQ 71

Query: 69  PKSVLMNEQEQKLKDSEAAIASLQTSKEYLEKQMAEVENNLRELL 114
            K  + N+  +K K +E  I  L+  K YLE+ + E E+N+RE+L
Sbjct: 72  SKEAIHNQLLEKQKIAEEKIKELEQKKSYLERSVKEAEDNIREML 116

[Close]

BLAST of Moc08g39270 vs. ExPASy Swiss-Prot
Match: O60925 (Prefoldin subunit 1 OS=Homo sapiens OX=9606 GN=PFDN1 PE=1 SV=2)

HSP 1 Score: 72.4 bits (176), Expect = 4.2e-12
Identity = 39/105 (37.14%), Postives = 62/105 (59.05%), Query Frame = 0


Query: 9   AFLEIQGRMIEVTGKLKQVQTQIRNKEGEKKRAFLTLEELRQLSEDTNAYKSIGRTFVLE 68
           AF E+Q ++I+   K+K    QI      KK A LT  E+  L ++TN Y+ +GR F+L+
Sbjct: 12  AFTELQAKVIDTQQKVKLADIQIEQLNRTKKHAHLTDTEIMTLVDETNMYEGVGRMFILQ 71

Query: 69  PKSVLMNEQEQKLKDSEAAIASLQTSKEYLEKQMAEVENNLRELL 114
            K  + ++  +K K +E  I  L+  K YLE+ + E E+N+RE+L
Sbjct: 72  SKEAIHSQLLEKQKIAEEKIKELEQKKSYLERSVKEAEDNIREML 116

[Close]

BLAST of Moc08g39270 vs. ExPASy Swiss-Prot
Match: Q5D016 (Prefoldin subunit 1 OS=Danio rerio OX=7955 GN=pfdn1 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.4e-10
Identity = 37/105 (35.24%), Postives = 59/105 (56.19%), Query Frame = 0


Query: 9   AFLEIQGRMIEVTGKLKQVQTQIRNKEGEKKRAFLTLEELRQLSEDTNAYKSIGRTFVLE 68
           AF E+Q +M++   K+K    QI      KK A LT  E+  L E T  ++  GR F+L+
Sbjct: 12  AFAELQAKMVDTQQKVKLADLQIEQLSRVKKHANLTHGEITSLPESTRMFEGAGRMFILQ 71

Query: 69  PKSVLMNEQEQKLKDSEAAIASLQTSKEYLEKQMAEVENNLRELL 114
            K  + N+  +K K ++  I  L+  K YLE+ + + E+N+RE+L
Sbjct: 72  SKGEISNQLLEKQKTADDKIKELEQKKTYLERSVKDAEDNIREML 116

[Close]

BLAST of Moc08g39270 vs. ExPASy TrEMBL
Match: A0A6J1D9I1 (prefoldin subunit 1 OS=Momordica charantia OX=3673 GN=LOC111018150 PE=3 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 1.6e-59
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0


Query: 1   MADEANRIAFLEIQGRMIEVTGKLKQVQTQIRNKEGEKKRAFLTLEELRQLSEDTNAYKS 60
           MADEANRIAFLEIQGRMIEVTGKLKQVQTQIRNKEGEKKRAFLTLEELRQLSEDTNAYKS
Sbjct: 1   MADEANRIAFLEIQGRMIEVTGKLKQVQTQIRNKEGEKKRAFLTLEELRQLSEDTNAYKS 60

Query: 61  IGRTFVLEPKSVLMNEQEQKLKDSEAAIASLQTSKEYLEKQMAEVENNLRELLQQDPGIA 120
           IGRTFVLEPKSVLMNEQEQKLKDSEAAIASLQTSKEYLEKQMAEVENNLRELLQQDPGIA
Sbjct: 61  IGRTFVLEPKSVLMNEQEQKLKDSEAAIASLQTSKEYLEKQMAEVENNLRELLQQDPGIA 120

Query: 121 RQIMSMSVA 130
           RQIMSMSVA
Sbjct: 121 RQIMSMSVA 129

[Close]

BLAST of Moc08g39270 vs. ExPASy TrEMBL
Match: A0A6J1ENI7 (prefoldin subunit 1-like OS=Cucurbita moschata OX=3662 GN=LOC111436124 PE=3 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 4.2e-55
Identity = 118/129 (91.47%), Postives = 125/129 (96.90%), Query Frame = 0


Query: 1   MADEANRIAFLEIQGRMIEVTGKLKQVQTQIRNKEGEKKRAFLTLEELRQLSEDTNAYKS 60
           MAD+ANR  FLEIQGRMIE+TGKLKQVQTQIRNKEGEKKRAFLTLEEL+QLS+DTNAYKS
Sbjct: 1   MADDANRATFLEIQGRMIEITGKLKQVQTQIRNKEGEKKRAFLTLEELKQLSDDTNAYKS 60

Query: 61  IGRTFVLEPKSVLMNEQEQKLKDSEAAIASLQTSKEYLEKQMAEVENNLRELLQQDPGIA 120
           IGRTFVLEPKSVLMNEQEQKLKDSEAAI SL +SKEYLEKQ+AEVENNLRELLQQDPGIA
Sbjct: 61  IGRTFVLEPKSVLMNEQEQKLKDSEAAIGSLHSSKEYLEKQLAEVENNLRELLQQDPGIA 120

Query: 121 RQIMSMSVA 130
           RQIMSMS+A
Sbjct: 121 RQIMSMSLA 129

[Close]

BLAST of Moc08g39270 vs. ExPASy TrEMBL
Match: A0A443NVT7 (Prefoldin subunit 1 OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKAN_01136300 PE=3 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 9.3e-55
Identity = 116/129 (89.92%), Postives = 125/129 (96.90%), Query Frame = 0


Query: 1   MADEANRIAFLEIQGRMIEVTGKLKQVQTQIRNKEGEKKRAFLTLEELRQLSEDTNAYKS 60
           MADEANR AFLEIQGRMIE+TGKLKQVQTQIRNKEGEKKRA+LTLEELRQLS+DTN YKS
Sbjct: 1   MADEANRTAFLEIQGRMIEITGKLKQVQTQIRNKEGEKKRAYLTLEELRQLSDDTNTYKS 60

Query: 61  IGRTFVLEPKSVLMNEQEQKLKDSEAAIASLQTSKEYLEKQMAEVENNLRELLQQDPGIA 120
           IG+ FVLEPKSVL+NEQEQKLKDSEAAIASLQTSKEYLEKQMAE+ENNLRELLQQDPG+A
Sbjct: 61  IGKAFVLEPKSVLVNEQEQKLKDSEAAIASLQTSKEYLEKQMAEIENNLRELLQQDPGLA 120

Query: 121 RQIMSMSVA 130
           RQIMS+S +
Sbjct: 121 RQIMSLSTS 129

[Close]

BLAST of Moc08g39270 vs. ExPASy TrEMBL
Match: A0A061FRM5 (Prefoldin 1 OS=Theobroma cacao OX=3641 GN=TCM_044384 PE=3 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 4.6e-54
Identity = 116/128 (90.62%), Postives = 123/128 (96.09%), Query Frame = 0


Query: 1   MADEANRIAFLEIQGRMIEVTGKLKQVQTQIRNKEGEKKRAFLTLEELRQLSEDTNAYKS 60
           MADE N+ AFLEIQGRMIE+TGKLKQVQ Q+RNKEGEKKRA+LTLEELRQLS+DTN YKS
Sbjct: 1   MADEVNKTAFLEIQGRMIELTGKLKQVQNQMRNKEGEKKRAYLTLEELRQLSDDTNTYKS 60

Query: 61  IGRTFVLEPKSVLMNEQEQKLKDSEAAIASLQTSKEYLEKQMAEVENNLRELLQQDPGIA 120
           IGRTFVLEPK VLMNEQEQKLKDSE+AIASLQTSKEYLEKQMAEVENNLRELLQQDPG+A
Sbjct: 61  IGRTFVLEPKPVLMNEQEQKLKDSESAIASLQTSKEYLEKQMAEVENNLRELLQQDPGLA 120

Query: 121 RQIMSMSV 129
           RQIMSMSV
Sbjct: 121 RQIMSMSV 128

[Close]

BLAST of Moc08g39270 vs. ExPASy TrEMBL
Match: A0A0A0LJF7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G070850 PE=3 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 4.6e-54
Identity = 117/129 (90.70%), Postives = 122/129 (94.57%), Query Frame = 0


Query: 1   MADEANRIAFLEIQGRMIEVTGKLKQVQTQIRNKEGEKKRAFLTLEELRQLSEDTNAYKS 60
           MADE NR  FLEIQGRMIE+TGKLKQ+QTQIRNKEGEKKRAFLTLEEL+QL+EDTN YKS
Sbjct: 1   MADEVNRATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLAEDTNTYKS 60

Query: 61  IGRTFVLEPKSVLMNEQEQKLKDSEAAIASLQTSKEYLEKQMAEVENNLRELLQQDPGIA 120
           IGRTFVLE KSVLMNEQEQK KDSE AIASLQ+SKEYLEKQMAEVENNLRELLQQDPGIA
Sbjct: 61  IGRTFVLESKSVLMNEQEQKFKDSETAIASLQSSKEYLEKQMAEVENNLRELLQQDPGIA 120

Query: 121 RQIMSMSVA 130
           RQIMSMSVA
Sbjct: 121 RQIMSMSVA 129

[Close]

BLAST of Moc08g39270 vs. TAIR 10
Match: AT2G07340.1 (PREFOLDIN 1 )

HSP 1 Score: 201.1 bits (510), Expect = 5.6e-52
Identity = 106/128 (82.81%), Postives = 118/128 (92.19%), Query Frame = 0


Query: 1   MADEANRIAFLEIQGRMIEVTGKLKQVQTQIRNKEGEKKRAFLTLEELRQLSEDTNAYKS 60
           MADEA R AF+EIQ  MIE+TGKLKQVQ Q+RNKEG++KRAFLTLEELR L E+TN YKS
Sbjct: 1   MADEATRAAFMEIQASMIELTGKLKQVQNQMRNKEGDRKRAFLTLEELRPLPEETNTYKS 60

Query: 61  IGRTFVLEPKSVLMNEQEQKLKDSEAAIASLQTSKEYLEKQMAEVENNLRELLQQDPGIA 120
           IGRTFVLEPK+VL  EQEQKLKDSEAA+ASLQTSKEYLEKQ+AEVENNLRELLQQ+PGIA
Sbjct: 61  IGRTFVLEPKTVLEGEQEQKLKDSEAAVASLQTSKEYLEKQVAEVENNLRELLQQEPGIA 120

Query: 121 RQIMSMSV 129
           +QIMSMS+
Sbjct: 121 QQIMSMSM 128

[Close]

BLAST of Moc08g39270 vs. TAIR 10
Match: AT2G07340.2 (PREFOLDIN 1 )

HSP 1 Score: 193.4 bits (490), Expect = 1.2e-49
Identity = 104/128 (81.25%), Postives = 117/128 (91.41%), Query Frame = 0


Query: 1   MADEANRIAFLEIQGRMIEVTGKLKQVQTQIRNKEGEKKRAFLTLEELRQLSEDTNAYKS 60
           MADEA R AF+EIQ  MIE+TGKLKQVQ Q+RNKEG++KRAFLTLEELR L E+TN YKS
Sbjct: 1   MADEATRAAFMEIQASMIELTGKLKQVQNQMRNKEGDRKRAFLTLEELRPLPEETNTYKS 60

Query: 61  IGRTFVLEPKSVLMNEQEQKLKDSEAAIASLQTSKEYLEKQMAEVENNLRELLQQDPGIA 120
           IG+ FVLEPK+VL  EQEQKLKDSEAA+ASLQTSKEYLEKQ+AEVENNLRELLQQ+PGIA
Sbjct: 61  IGK-FVLEPKTVLEGEQEQKLKDSEAAVASLQTSKEYLEKQVAEVENNLRELLQQEPGIA 120

Query: 121 RQIMSMSV 129
           +QIMSMS+
Sbjct: 121 QQIMSMSM 127

The following BLAST results are available for this feature:

BLAST of Moc08g39270 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022149806.1	3.4e-59	100.00	prefoldin subunit 1 [Momordica charantia]	[more]
XP_022929581.1	8.6e-55	91.47	prefoldin subunit 1-like [Cucurbita moschata]	[more]
XP_023546624.1	1.9e-54	91.47	prefoldin subunit 1-like [Cucurbita pepo subsp. pepo]	[more]
RWR82635.1	1.9e-54	89.92	prefoldin subunit 1 [Cinnamomum micranthum f. kanehirae]	[more]
KAF3437262.1	2.5e-54	91.41	hypothetical protein FNV43_RR20015 [Rhamnella rubrinervis]	[more]

BLAST of Moc08g39270 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3SZE2	8.5e-13	38.10	Prefoldin subunit 1 OS=Bos taurus OX=9913 GN=PFDN1 PE=2 SV=1	[more]
Q9CWM4	1.1e-12	38.10	Prefoldin subunit 1 OS=Mus musculus OX=10090 GN=Pfdn1 PE=1 SV=1	[more]
Q5RAM7	1.1e-12	38.10	Prefoldin subunit 1 OS=Pongo abelii OX=9601 GN=PFDN1 PE=2 SV=1	[more]
O60925	4.2e-12	37.14	Prefoldin subunit 1 OS=Homo sapiens OX=9606 GN=PFDN1 PE=1 SV=2	[more]
Q5D016	1.4e-10	35.24	Prefoldin subunit 1 OS=Danio rerio OX=7955 GN=pfdn1 PE=2 SV=1	[more]

BLAST of Moc08g39270 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D9I1	1.6e-59	100.00	prefoldin subunit 1 OS=Momordica charantia OX=3673 GN=LOC111018150 PE=3 SV=1	[more]
A0A6J1ENI7	4.2e-55	91.47	prefoldin subunit 1-like OS=Cucurbita moschata OX=3662 GN=LOC111436124 PE=3 SV=1	[more]
A0A443NVT7	9.3e-55	89.92	Prefoldin subunit 1 OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKAN_0113...	[more]
A0A061FRM5	4.6e-54	90.63	Prefoldin 1 OS=Theobroma cacao OX=3641 GN=TCM_044384 PE=3 SV=1	[more]
A0A0A0LJF7	4.6e-54	90.70	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G070850 PE=3 SV=1	[more]

BLAST of Moc08g39270 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G07340.1	5.6e-52	82.81	PREFOLDIN 1	[more]
AT2G07340.2	1.2e-49	81.25	PREFOLDIN 1	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 31..51
None	No IPR available	COILS	Coil	Coil	coord: 74..115
None	No IPR available	PANTHER	PTHR20903	PREFOLDIN SUBUNIT 1-RELATED	coord: 1..123
None	No IPR available	PANTHER	PTHR20903:SF0	PREFOLDIN SUBUNIT 1	coord: 1..123
None	No IPR available	SUPERFAMILY	46579	Prefoldin	coord: 10..114
IPR002777	Prefoldin beta-like	PFAM	PF01920	Prefoldin_2	coord: 13..115 e-value: 1.3E-20 score: 73.3
IPR009053	Prefoldin	GENE3D	1.10.287.370		coord: 9..117 e-value: 1.3E-16 score: 62.4

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc08g39270.1	Moc08g39270.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016272	prefoldin complex
molecular_function	GO:0044183	protein folding chaperone
molecular_function	GO:0051082	unfolded protein binding