Moc08g38970 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc08g38970
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	GDT1 family protein
Location	chr8: 29387699 .. 29393354 (-)
RNA-Seq Expression	Moc08g38970
Synteny	Moc08g38970

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGTTGCCTTCAAACCCTACTGGAAAACTCTCTCTCTCCCCCTGTTTTCTTCTCCTTCTTCTCCTTCTTCCTCTGTTCGCCTCCGTTCAGGTAGTCTTCATTCCTTTTGCTGTCTATGTTGATTTGGGCGTTCTTATGTGGGGTTTTATTTGTGATATGTTGGGTGTTTTAGGTGTATTCTGCGGAAGTGGAGAACGAGGAGTTGGATGGACCTAAGGATCTCGGTCGACGTAGCAAGGTGAGTGCGATTCGTTATCTTCTCCGCGAGCTGCCATGGCGAGAGGGGGTTTTGGGGTTAATGAGATCGAGATCTTTGTGCTTTGACATAACTGTTTTTCTTCATGTTGTAGATTGTAAATAGAACTAACTAATGGGATACATTGTTGAGCGTCCTAGGCGTTTTACTACCTGTTTATATATGAAAAGGAAAGAGAATGTTAAGTCGAAGGGCCGTGTGCATCTAGCTAACACCTGGCATGCATTGATTCACTGGGTGCTGCTGGTTCTGTTTTGGAGAACTTGAAGGCCAGCTTACTCGGGCTTATGGTTCTTTAGGAGCTTGTTGGGAGTGTTTTCTGAAAGCAGTTTTTAGAATTGTTTTCGATTTGAAATGCTGTTTGAAACATATTTATTCCTATGTTTTTTGCTTATTTCTATCATTCTATGTATTAAAACTTGAAAATATAACATGTTTAAATCAGTTTATATTTACAAAGCAATTAATTATTGAATGTGAAGTATTTTTTTTTACAGAACAACTGACGAAACATTTGAAATTCTGTTTGCTTCTATTCTTTGTTTTAAAAAGTTATGTAACAGACATGTTTTCTGATTCATAAATTGGGGAACTTTAGTAGAGCTTCCAAACAGTCTGAGCAACTAGCAACAAAAGTTAATTACTAGTTGTTTAGTAACTAATACTTTAGATATTTTCTCTTATTGTTTTGGCATTGATGCAATGGTTTTCTTCCTTGTATGGAGCATCTTGTTGAACAAATGGCCATTCTGACGATTAAAAAGATTTGGGATTAAAATGCAAAGCCCCAATTGACCATTTCCTTTATCTCTTCTTCTTTAAATTCTAGTTTCAATTCTGATTTTATACTTATGTGTTTCTTATCATTAGATTTCCTGGGGCAACCGTGAAGCTGTTGTTGTGAAAAAGGATGGTGTTGACTCAGAAAATCTTAATCTTGACATGGACTCCATTGGTCTTGGAGTTTTTGATGCATTTTTTGCAAGTTTGTCCATGATAATTGTCAGTGAGGTTGGTATAGTTGATTCTATTCTCACTTATACTTCCTGTGATTTTTCTCAGAAAAATTTGGTCCATTCTCAAAATGAGCTTGGGTGAATTTCTGCAGTAACAGTTCATTGAGTTGTCAACATGAACTGTAAAGGCTCAAAGATGGGAAATGGCGGTTTTGGACCTATCTACTTTTTTATTCAAGTTCGATTATTTTGATTTTTCTTGAATGATTGTGTAGATCGGAGATGAGACATTTATAATAGCTGCACTTATGGCTATGCGCCATCCCAAGTCCATTGTTCTATCTGGTGCGCTCACTGCCCTGATTGTAATGACAGTAAGTTGGATAGGTCTTTCTTTCATTAACCCCCAGGATAGTAATTTAAGTTTCAAGATTTTTTACAGTTATGAATCTGCATCTTTGTTATTTGTACTCTTTAGCAACTGCACATCAACTTTCTTTCTCGGGTGAATAAGAATAGAACCGGTTTCATGTCCATTAGGTACTCTCAACTGGCTTAGGTAGGATAGTGCCAAATTTGATATCAAGGAAACATACCAATAATGCTGCTACAGGTACATACAAAGTATTATACATTTTTGTTTCTTACTATTTGTAGATTAGTGTGTGATGCTATTCATTATATTTTAAATATATTTTTTTGGAGCATCTTTTTTATAATATCTTTCCTGTCTAACCGTTACCTTTTGACACCCCCACTGTTGTAACTTCATTCATATGAAGGGTTGATGATCTTAACAATTTTCTACTGTTATTTCACCGTCACTATTAGTAGTTCCTTTTTCCTTTTGTTGCAATGAAAAAAAAAAAAAAAATCTTAAGATCCACCTTGTTTTAATGCCATCTATACGTATCAAAAACTAAATAAAGACTTCTACTAATAGAAAGCAGAAGATACGGGATGGGTTGGATAAGAAATATTGACTTCATAAATATCAACCTATACCAAAGGCTTCCTATGAGGAGACAAGCTTTGTAAAAGCATCTGCTCATCTAAGGAAGGAAGGAATTGAATGGAGGAGTTAATGGTGTCACTGCTATCTCTCCCACCTGTGGCAATAAGAAAGAGTTTAGAGAGAATGAGTTCAAACCTCATGGTGGCCACCTACTTAAGATTTAATATCCTATAGGTTTCATTGACAACCAAATCTAGTAGGGTCAAACGGTTGTCCCATGAGATTAGTTTAGGTGTGCATAAGTGAGTTTGGACACTCATGGATATCAAAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATCAATTGACTAATTGAGCCACAGTGCTGTAGTGTTTTGACATGAATGCAAAGCTTTTTTTACCACTTAAGCGAATTTAAACTATGATGAAGATAAAACTTTTTGGCAGTGATGCATCGCTTAAAGATCTTATTCTGATTACTGGGGTCGGTTTAATCTTTTGTCTTCTGATCCTGCACTTAATGTGTATTCACATATTTTCTTTAACTTGATGCATCGGTTAAACAACTCTTGCTTGTTATTTTGGGTTGTCATAGCGGTACTTCTCTCCATGGAGGATAAGGCTACATTTATTAACTCTAAGTCTCTAATTAAATTGCATGCTTTTGCTGGAGTTTTTATTTTGTTTGCTTCTTCTGAGTTTGGCTATTTTGACTTGACATTGATATATACTAGTAATGTCAGCCAACATTTTTACATTGTTTTTTGCAGTTTTGTATGCATTTTTTGGATTGCGGTTACTTTACATTGCTTGGAGATCCAAAGCAGATTCAAAAACTTCACAGAAAAAGGAAATGGAAGAAGTATGTTATCTTCAACACCTTTCGCAGTTTGATGCTTGTCTACCCTTTATTTTGTTTGGATTCTTGTCTTGCCTGCTTTTTTCATTATGTCTATTGGACATTTCTGGTAAAAGATTTGGTGATTCATGATCTATGACATGAAGATGATCAAATACAGTTGTCTTTGGTAATTTATCTTTTTCACCTGTTTCATTTGGGATAGAACCCAAACAACTAGAAATATACTGAAAGATAAAGGATAGAACAACGCAATGAATCTCAAGTAATTCGAGGTAGTTGGACCCTCCTCTCTCTTGAGCAATCTTACTCAAGCCTAAAATTGCCTACCTCCATTATTTCCTCTTCAATCTATCTTCTTTCTTTCTTTCTTTTTTTTTTTTGATCACCAGAAGTCGGACCTTTTCTTCTCTATACTCAGGGGCACCCACGCCTGGCCAACGCCCAGACCCGCTTTCCCCCTCACTCTATTTATAAGAGTACCCCTAACAACTTCCCTAACTAATTACTAGTATACCTTTAATATCCTAGTAATATCACTAATCCTCTCTTAATAGCATTCGTATCAATTTGTTTGGAAGATCTTTATCTGTTATTTATAAATGCCAATATGAAAGGAACAAACAGGTGTTTCAGGGGAGTGCATACTTGTTGTGATGATTTTTGGGGTTAAGTTAGATTATTTTCTTCTACTTGGTGCTCTTTTCTTATTAGCTTTAGTAATTATAACTTGGTAGGGGCAACCTACGTAGGATTTAATATCATACGAGTTTTTGGGACAACCAAATACAGTAGGGTTAGGTGGTTGTTCGATGAGATTAGTTGAGAAGCGTGGAAGCTAGTCCGGACACTCAAAGATATTGAGAGAAAAAAAGAAAAGAAAAAACAGCCTAGCGCAAATATTTACCAATTAGGATACCTCATCTCCCATTTCGTATCTCTTCTCCTTGTTTAATGATTCTTTCTATCTCCTAAAAAAAACGACTATTTACAACCCACCCCCACCACCAAAATAATAATACTAATAATAAAACAGATAAATAGCTATTTCAATACATCAAGGTCATTTTTTAAGAGTTTGCCTGATTGCAATGTGCACCATGAAACCTGCTAGAGTGGACTCTTTATATTCCATTATTCCTAATATTCAAGTCTTGACTCTTTATATTCATAACTGTCTCATGTCCAGGCACCATACAACATTCTAAATGCAAGGTTACACTCCGGAGAATTCTTTCATGTTTGATAGTGTTGTTAGTTACTATATGCTATGATTTGGATTTAGATTTTTTTTCTCTAAAACTTTATAGTTCCCCTTGTAATCATAAAAATATTTGAAGCCATCCTGAAGATTGTTGCTTCTCTTTTATGTCCTGAATGAATGAATATATTCATCATTCATTTGTTCCCCATCTTTGTTATCTCATTTTTGAGAAAGCATGTGGCCATTATTTTAGCTACATATGGAATTTAATCTTTAGGATTTTGTATTATTCCATTGATTAGCCTTTCCTTGTTTTTCAGTATTTCTTTGATGATCTTTAGTCAGGCAATGTGCTAATGGTTCCCTAATCCTATAATTCTCTAGCTAAATTTGCTTCTAATCACGTGTTCAGGTGGAGGAGAAACTTGAGGCTGGACAATCCAAGACAACCTTCCGCCGCTTCTTTTTGCGATTTTGCACACCCATATTTTTGGAGGTCCACAAAACCTACTATTATCACTGATTTAACATTTATTTTTCAAACTGGCTGGGCTGCTGTCTATATTATTGTTTTCTTTTTTCTTTTTCCTAATTCTTACAGAGTTTAAAAAATTTTGTGCCATTGAACTGCATATCATTTTTCATATATAATATTCTCCTAACTGATTTTGAATACCGTTTTGGGTTTGCAGTCGTTTATATTAACATTTCTTGCCGAATGGGGTGATCGGAGTCAGATAGCAACCATTGCTGTAAGTTCTTCCTTTTTTTACCCCACCGAAGTCCGATAGCAACCATTGCTGTGGGCTATTGGCTTAAATCCTATTTTAGTTTCTAAACTTTCCTAACTATTTCATCTGGTCTAGTTTTAGTCCTCAACTTTCAACTGTTCTGGTAGAGTTCCTCAACAGTTTTTATTGTAGTTCTTGCTTTCAAGGTTTCATTATTTATTTAATCTTGAACTCAAAACCTGAACTACTACATGTGGCTTCAAATACTTGTCCGTGTAATGAACAAAACAACTGCACGTTAGGTTTTTGTTGAATAATTTACAGAAAACCACGAAAAGAACAGTTTAGAGATCAAAACAAAATGGTTGAAAGTTTTTGGCCTGTAATGAGATTCAGACTATATTTTTATTTAAGCATCTCCCAAATTAAATTGAATTCAAATATTTTTGGGGATTTGTTATTGCAGCTAGCAACACACAAAAATGCACTTGGAGTGGCTGTGGGAGCCATATTGGGGCATTCAATTTGTACATCAATGGCTGTGATTGGTGGAAGCATGTTGGCATCAAAGATATCCCAAGGCACTGTTGCAACTGTTGGAGGCTTGCTCTTCCTTGGCTTCTCCTTGTCTTCCTATTTTTTTCCCCCTCTATAA

mRNA sequence

ATGGGGTTGCCTTCAAACCCTACTGGAAAACTCTCTCTCTCCCCCTGTTTTCTTCTCCTTCTTCTCCTTCTTCCTCTGTTCGCCTCCGTTCAGGTGTATTCTGCGGAAGTGGAGAACGAGGAGTTGGATGGACCTAAGGATCTCGGTCGACGTAGCAAGATTTCCTGGGGCAACCGTGAAGCTGTTGTTGTGAAAAAGGATGGTGTTGACTCAGAAAATCTTAATCTTGACATGGACTCCATTGGTCTTGGAGTTTTTGATGCATTTTTTGCAAGTTTGTCCATGATAATTGTCAGTGAGATCGGAGATGAGACATTTATAATAGCTGCACTTATGGCTATGCGCCATCCCAAGTCCATTGTTCTATCTGGTGCGCTCACTGCCCTGATTGTAATGACAGTACTCTCAACTGGCTTAGGTAGGATAGTGCCAAATTTGATATCAAGGAAACATACCAATAATGCTGCTACAGTTTTGTATGCATTTTTTGGATTGCGGTTACTTTACATTGCTTGGAGATCCAAAGCAGATTCAAAAACTTCACAGAAAAAGGAAATGGAAGAAGTGGAGGAGAAACTTGAGGCTGGACAATCCAAGACAACCTTCCGCCGCTTCTTTTTGCGATTTTGCACACCCATATTTTTGGAGTCGTTTATATTAACATTTCTTGCCGAATGGGGTGATCGGAGTCAGATAGCAACCATTGCTCTAGCAACACACAAAAATGCACTTGGAGTGGCTGTGGGAGCCATATTGGGGCATTCAATTTGTACATCAATGGCTGTGATTGGTGGAAGCATGTTGGCATCAAAGATATCCCAAGGCACTGTTGCAACTGTTGGAGGCTTGCTCTTCCTTGGCTTCTCCTTGTCTTCCTATTTTTTTCCCCCTCTATAA

Coding sequence (CDS)

ATGGGGTTGCCTTCAAACCCTACTGGAAAACTCTCTCTCTCCCCCTGTTTTCTTCTCCTTCTTCTCCTTCTTCCTCTGTTCGCCTCCGTTCAGGTGTATTCTGCGGAAGTGGAGAACGAGGAGTTGGATGGACCTAAGGATCTCGGTCGACGTAGCAAGATTTCCTGGGGCAACCGTGAAGCTGTTGTTGTGAAAAAGGATGGTGTTGACTCAGAAAATCTTAATCTTGACATGGACTCCATTGGTCTTGGAGTTTTTGATGCATTTTTTGCAAGTTTGTCCATGATAATTGTCAGTGAGATCGGAGATGAGACATTTATAATAGCTGCACTTATGGCTATGCGCCATCCCAAGTCCATTGTTCTATCTGGTGCGCTCACTGCCCTGATTGTAATGACAGTACTCTCAACTGGCTTAGGTAGGATAGTGCCAAATTTGATATCAAGGAAACATACCAATAATGCTGCTACAGTTTTGTATGCATTTTTTGGATTGCGGTTACTTTACATTGCTTGGAGATCCAAAGCAGATTCAAAAACTTCACAGAAAAAGGAAATGGAAGAAGTGGAGGAGAAACTTGAGGCTGGACAATCCAAGACAACCTTCCGCCGCTTCTTTTTGCGATTTTGCACACCCATATTTTTGGAGTCGTTTATATTAACATTTCTTGCCGAATGGGGTGATCGGAGTCAGATAGCAACCATTGCTCTAGCAACACACAAAAATGCACTTGGAGTGGCTGTGGGAGCCATATTGGGGCATTCAATTTGTACATCAATGGCTGTGATTGGTGGAAGCATGTTGGCATCAAAGATATCCCAAGGCACTGTTGCAACTGTTGGAGGCTTGCTCTTCCTTGGCTTCTCCTTGTCTTCCTATTTTTTTCCCCCTCTATAA

Protein sequence

MGLPSNPTGKLSLSPCFLLLLLLLPLFASVQVYSAEVENEELDGPKDLGRRSKISWGNREAVVVKKDGVDSENLNLDMDSIGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSIVLSGALTALIVMTVLSTGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRSKADSKTSQKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATHKNALGVAVGAILGHSICTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL

Homology

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BLAST of Moc08g38970 vs. NCBI nr
Match: XP_022997610.1 (putative pentatricopeptide repeat-containing protein At3g23330 [Cucurbita maxima])

HSP 1 Score: 515.4 bits (1326), Expect = 3.3e-142
Identity = 274/298 (91.95%), Postives = 284/298 (95.30%), Query Frame = 0


Query: 1   MGLPSNPTGKLSLSPCFLLLLLLLPLFASVQVYSAEVENEELDGPKDLGRRSKISWGNRE 60
           MGL SNPTG LS SP  +LLLLL+ LFASVQVYSAEVE EELDGPKDLGRRSKISW N +
Sbjct: 1   MGLRSNPTGNLSFSPSLILLLLLVSLFASVQVYSAEVEKEELDGPKDLGRRSKISWNNVD 60

Query: 61  AVVVKKDGVDSENLNLDMDSIGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI 120
            +  KKD VDSE+LNLD+DS+GLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI
Sbjct: 61  TIAAKKDVVDSEDLNLDLDSVGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI 120

Query: 121 VLSGALTALIVMTVLSTGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRSKADSKT 180
           VLSGAL+ALIVMTVLSTGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRSKADSK+
Sbjct: 121 VLSGALSALIVMTVLSTGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRSKADSKS 180

Query: 181 SQKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATH 240
           S KKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATH
Sbjct: 181 STKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATH 240

Query: 241 KNALGVAVGAILGHSICTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL 299
           KNALGVAVGAILGHS+CTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL
Sbjct: 241 KNALGVAVGAILGHSVCTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL 298

[Close]

BLAST of Moc08g38970 vs. NCBI nr
Match: XP_023545881.1 (putative pentatricopeptide repeat-containing protein At3g23330 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 512.7 bits (1319), Expect = 2.1e-141
Identity = 272/298 (91.28%), Postives = 284/298 (95.30%), Query Frame = 0


Query: 1   MGLPSNPTGKLSLSPCFLLLLLLLPLFASVQVYSAEVENEELDGPKDLGRRSKISWGNRE 60
           MGL SNPTG LS SP  +LLLLL+ LFASVQV+SAEVE EELDGPKDLGRRSKISW N +
Sbjct: 1   MGLRSNPTGNLSFSPSLILLLLLVSLFASVQVFSAEVEKEELDGPKDLGRRSKISWNNID 60

Query: 61  AVVVKKDGVDSENLNLDMDSIGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI 120
            +  +KD VDSE+LNLD+DS+GLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI
Sbjct: 61  TIAARKDVVDSEDLNLDLDSVGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI 120

Query: 121 VLSGALTALIVMTVLSTGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRSKADSKT 180
           VLSGAL+ALIVMTVLSTGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRSKADSK+
Sbjct: 121 VLSGALSALIVMTVLSTGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRSKADSKS 180

Query: 181 SQKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATH 240
           S KKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATH
Sbjct: 181 STKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATH 240

Query: 241 KNALGVAVGAILGHSICTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL 299
           KNALGVAVGAILGHS+CTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL
Sbjct: 241 KNALGVAVGAILGHSVCTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL 298

[Close]

BLAST of Moc08g38970 vs. NCBI nr
Match: KAG6598935.1 (GDT1-like protein 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 510.4 bits (1313), Expect = 1.1e-140
Identity = 272/298 (91.28%), Postives = 283/298 (94.97%), Query Frame = 0


Query: 1   MGLPSNPTGKLSLSPCFLLLLLLLPLFASVQVYSAEVENEELDGPKDLGRRSKISWGNRE 60
           MGL SNPTG LS SP  +LLLLL+ LFASVQV+SAEVE EELD PKDLGRRSKISW N +
Sbjct: 1   MGLRSNPTGNLSFSPSLILLLLLVSLFASVQVFSAEVEKEELDVPKDLGRRSKISWNNVD 60

Query: 61  AVVVKKDGVDSENLNLDMDSIGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI 120
            +  KKD VDSE+LNLD+DS+GLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI
Sbjct: 61  TIAAKKDVVDSEDLNLDLDSVGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI 120

Query: 121 VLSGALTALIVMTVLSTGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRSKADSKT 180
           VLSGAL+ALIVMTVLSTGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRSKADSK+
Sbjct: 121 VLSGALSALIVMTVLSTGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRSKADSKS 180

Query: 181 SQKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATH 240
           S KKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATH
Sbjct: 181 STKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATH 240

Query: 241 KNALGVAVGAILGHSICTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL 299
           KNALGVAVGAILGHS+CTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL
Sbjct: 241 KNALGVAVGAILGHSVCTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL 298

[Close]

BLAST of Moc08g38970 vs. NCBI nr
Match: XP_022929759.1 (putative pentatricopeptide repeat-containing protein At3g23330 [Cucurbita moschata])

HSP 1 Score: 510.4 bits (1313), Expect = 1.1e-140
Identity = 272/298 (91.28%), Postives = 283/298 (94.97%), Query Frame = 0


Query: 1   MGLPSNPTGKLSLSPCFLLLLLLLPLFASVQVYSAEVENEELDGPKDLGRRSKISWGNRE 60
           MGL SNPTG LS SP  +LLLLL+ LFASVQV+SAEVE EELD PKDLGRRSKISW N +
Sbjct: 1   MGLRSNPTGNLSFSPSLILLLLLVSLFASVQVFSAEVEKEELDVPKDLGRRSKISWNNVD 60

Query: 61  AVVVKKDGVDSENLNLDMDSIGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI 120
            +  KKD VDSE+LNLD+DS+GLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI
Sbjct: 61  TIAAKKDVVDSEDLNLDLDSVGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI 120

Query: 121 VLSGALTALIVMTVLSTGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRSKADSKT 180
           VLSGAL+ALIVMTVLSTGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRSKADSK+
Sbjct: 121 VLSGALSALIVMTVLSTGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRSKADSKS 180

Query: 181 SQKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATH 240
           S KKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATH
Sbjct: 181 STKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATH 240

Query: 241 KNALGVAVGAILGHSICTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL 299
           KNALGVAVGAILGHS+CTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL
Sbjct: 241 KNALGVAVGAILGHSVCTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL 298

[Close]

BLAST of Moc08g38970 vs. NCBI nr
Match: XP_008441858.1 (PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At3g23330 [Cucumis melo])

HSP 1 Score: 508.8 bits (1309), Expect = 3.1e-140
Identity = 274/298 (91.95%), Postives = 281/298 (94.30%), Query Frame = 0


Query: 1   MGLPSNPTGKLSLSPCFLLLLLLLPLFASVQVYSAEVENEELDGPKDLGRRSKISWGNRE 60
           MGL SNPT  LS SP FLL LLLL LFAS+QVYSAE E +ELDGPKDLGRRSKISW N +
Sbjct: 1   MGLRSNPTTTLSFSPSFLLFLLLLSLFASIQVYSAEAEKDELDGPKDLGRRSKISWSNSD 60

Query: 61  AVVVKKDGVDSENLNLDMDSIGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI 120
            V  KKDGVDSE+LNLDMDSIGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI
Sbjct: 61  TVAAKKDGVDSEDLNLDMDSIGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI 120

Query: 121 VLSGALTALIVMTVLSTGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRSKADSKT 180
           VLSGAL ALIVMTVLSTGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRSK++ K+
Sbjct: 121 VLSGALAALIVMTVLSTGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRSKSE-KS 180

Query: 181 SQKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATH 240
           S KKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATH
Sbjct: 181 STKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATH 240

Query: 241 KNALGVAVGAILGHSICTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL 299
           KNALGVAVGAILGHSICTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL
Sbjct: 241 KNALGVAVGAILGHSICTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL 297

[Close]

BLAST of Moc08g38970 vs. ExPASy Swiss-Prot
Match: Q93Y38 (GDT1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=At5g36290 PE=2 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 5.4e-103
Identity = 209/302 (69.21%), Postives = 242/302 (80.13%), Query Frame = 0


Query: 1   MGLPSNPTGKLSLSPCFLLLLLLLPLFASVQVYSAEVENEELD----GPKDLGRRSKISW 60
           MGL SNPT  + ++  F L+       +S+    + VEN E        K+LGRR  +  
Sbjct: 1   MGLISNPTRLILVATIFFLV-------SSISGQDSVVENNERQESEGSGKELGRRGMVG- 60

Query: 61  GNREAVVVKKDGVDSENLNLDMDSIGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRH 120
             R  V    D + +  LNLD+D+    VFDA F+S SMI+V+EIGDETFIIAALMAMRH
Sbjct: 61  TERIGVDTVVDNIGALGLNLDLDATAPSVFDALFSSFSMILVTEIGDETFIIAALMAMRH 120

Query: 121 PKSIVLSGALTALIVMTVLSTGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRSKA 180
           PK+ VLSGAL+AL VMT+LSTGLGRIVPNLISRKHTN+AATVLYAFFGLRLLYIAWRS  
Sbjct: 121 PKATVLSGALSALFVMTILSTGLGRIVPNLISRKHTNSAATVLYAFFGLRLLYIAWRS-T 180

Query: 181 DSKTSQKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIA 240
           DSK++QKKEMEEVEEKLE+GQ KT FRR F RFCTPIFLESFILTFLAEWGDRSQIATIA
Sbjct: 181 DSKSNQKKEMEEVEEKLESGQGKTPFRRLFSRFCTPIFLESFILTFLAEWGDRSQIATIA 240

Query: 241 LATHKNALGVAVGAILGHSICTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFP 299
           LATHKNA+GVA+GA +GH++CTS+AV+GGSMLAS+ISQ TVATVGGLLFLGFS+SSYF+P
Sbjct: 241 LATHKNAIGVAIGASIGHTVCTSLAVVGGSMLASRISQRTVATVGGLLFLGFSVSSYFYP 293

[Close]

BLAST of Moc08g38970 vs. ExPASy Swiss-Prot
Match: Q6ZIB9 (GDT1-like protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0528500 PE=2 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 2.0e-102
Identity = 212/284 (74.65%), Postives = 234/284 (82.39%), Query Frame = 0


Query: 20  LLLLLPLFASVQVYSAEVENEELDGPKD-----LGRRSKISWGNREAVVVKKDGVDSENL 79
           LLLLL L A+    +A  + E+  G  D     L RR+K+      A         S+  
Sbjct: 10  LLLLLLLVAAAAAAAAAGDQEDPRGGGDNGTARLDRRTKMFLHAARA---------SDGG 69

Query: 80  NLDMDSIGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSIVLSGALTALIVMTV 139
              M+  GLG+FDAFFASLSMI+VSEIGDETFIIAALMAMRHPKS VLSGAL+AL+VMT+
Sbjct: 70  ATGMEKAGLGLFDAFFASLSMILVSEIGDETFIIAALMAMRHPKSTVLSGALSALVVMTI 129

Query: 140 LSTGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRSKADSKTSQKKEMEEVEEKLE 199
           LSTGLGRIVPNLISRKHTN+AATVLYAFFGLRLLYIAWRS  DSK SQKKE+EEVEEKLE
Sbjct: 130 LSTGLGRIVPNLISRKHTNSAATVLYAFFGLRLLYIAWRS--DSKASQKKEIEEVEEKLE 189

Query: 200 AGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATHKNALGVAVGAILGH 259
           AGQ K+TFRR F RFCTPIFLESF+LTFLAEWGDRSQIATIALATHKNA+GVAVGA LGH
Sbjct: 190 AGQGKSTFRRIFSRFCTPIFLESFVLTFLAEWGDRSQIATIALATHKNAVGVAVGATLGH 249

Query: 260 SICTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL 299
           +ICTS AV+GGSMLASKISQGTVAT+GGLLFLGFSLSSYF+PPL
Sbjct: 250 TICTSFAVVGGSMLASKISQGTVATIGGLLFLGFSLSSYFYPPL 282

[Close]

BLAST of Moc08g38970 vs. ExPASy Swiss-Prot
Match: A2YXC7 (GDT1-like protein 4 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_29993 PE=3 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 1.3e-101
Identity = 210/283 (74.20%), Postives = 234/283 (82.69%), Query Frame = 0


Query: 19  LLLLLLPLFASVQVYSAEVENEE---LDGPKDLGRRSKISWGNREAVVVKKDGVDSENLN 78
           LLLLLL + A+    + + E+      +G   L RR+K+      A         S+   
Sbjct: 10  LLLLLLLVAAAAAAAAGDQEDPRGGGDNGTARLDRRTKMFLHAARA---------SDGGA 69

Query: 79  LDMDSIGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSIVLSGALTALIVMTVL 138
             M+  GLG+FDAFFASLSMI+VSEIGDETFIIAALMAMRHPKS VLSGAL+AL+VMT+L
Sbjct: 70  TGMEKAGLGLFDAFFASLSMILVSEIGDETFIIAALMAMRHPKSTVLSGALSALVVMTIL 129

Query: 139 STGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRSKADSKTSQKKEMEEVEEKLEA 198
           STGLGRIVPNLISRKHTN+AATVLYAFFGLRLLYIAWRS  DSK SQKKE+EEVEEKLEA
Sbjct: 130 STGLGRIVPNLISRKHTNSAATVLYAFFGLRLLYIAWRS--DSKASQKKEIEEVEEKLEA 189

Query: 199 GQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATHKNALGVAVGAILGHS 258
           GQ K+TFRR F RFCTPIFLESF+LTFLAEWGDRSQIATIALATHKNA+GVAVGA LGH+
Sbjct: 190 GQGKSTFRRIFSRFCTPIFLESFVLTFLAEWGDRSQIATIALATHKNAVGVAVGATLGHT 249

Query: 259 ICTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL 299
           ICTS AV+GGSMLASKISQGTVAT+GGLLFLGFSLSSYF+PPL
Sbjct: 250 ICTSFAVVGGSMLASKISQGTVATIGGLLFLGFSLSSYFYPPL 281

[Close]

BLAST of Moc08g38970 vs. ExPASy Swiss-Prot
Match: A2ZE50 (GDT1-like protein 3 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_36063 PE=3 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 5.6e-100
Identity = 209/288 (72.57%), Postives = 237/288 (82.29%), Query Frame = 0


Query: 14  SPCFLLLLLLLPLFASVQVYSAEVENEELDGPKDLGRRSKISWGNREAVV---VKKDGVD 73
           +P  L+LL+LL   A+V V     E+ E  G       SK+S G R       +KK+ V 
Sbjct: 4   NPRLLILLVLLAFSATVAV----AEDGESTG------GSKVSLGRRAGGFLHGLKKEAVV 63

Query: 74  SENLNLDMDSIGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSIVLSGALTALI 133
             +  + +D +G G+FDA FASLSMI+VSEIGDETFIIAALMAMRHPKSIVLSGAL+AL 
Sbjct: 64  EGDHGVALDEVGPGLFDALFASLSMILVSEIGDETFIIAALMAMRHPKSIVLSGALSALY 123

Query: 134 VMTVLSTGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRSKADSKTSQKKEMEEVE 193
           VMTVLSTGLGRIVPNLISRKHTN+AATVLY FFGLRLLYIAW  K+D K SQKKEMEEVE
Sbjct: 124 VMTVLSTGLGRIVPNLISRKHTNSAATVLYLFFGLRLLYIAW--KSDPKGSQKKEMEEVE 183

Query: 194 EKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATHKNALGVAVGA 253
           EKLE+GQ K+T RRFF RFCTPIFLE+FILTFLAEWGDRSQIATIALATHKNA+GVAVGA
Sbjct: 184 EKLESGQGKSTLRRFFGRFCTPIFLEAFILTFLAEWGDRSQIATIALATHKNAIGVAVGA 243

Query: 254 ILGHSICTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL 299
            LGH++CTS+AVIGGSMLASKISQ TVAT+GG+LFLGFS+SSYF+PPL
Sbjct: 244 SLGHTVCTSLAVIGGSMLASKISQRTVATIGGVLFLGFSVSSYFYPPL 279

[Close]

BLAST of Moc08g38970 vs. ExPASy Swiss-Prot
Match: Q2R4J1 (GDT1-like protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os11g0472500 PE=2 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 5.6e-100
Identity = 209/288 (72.57%), Postives = 237/288 (82.29%), Query Frame = 0


Query: 14  SPCFLLLLLLLPLFASVQVYSAEVENEELDGPKDLGRRSKISWGNREAVV---VKKDGVD 73
           +P  L+LL+LL   A+V V     E+ E  G       SK+S G R       +KK+ V 
Sbjct: 4   NPRLLILLVLLAFSATVAV----AEDGESTG------GSKVSLGRRAGGFLHGLKKEAVV 63

Query: 74  SENLNLDMDSIGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSIVLSGALTALI 133
             +  + +D +G G+FDA FASLSMI+VSEIGDETFIIAALMAMRHPKSIVLSGAL+AL 
Sbjct: 64  EGDHGVALDEVGPGLFDALFASLSMILVSEIGDETFIIAALMAMRHPKSIVLSGALSALY 123

Query: 134 VMTVLSTGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRSKADSKTSQKKEMEEVE 193
           VMTVLSTGLGRIVPNLISRKHTN+AATVLY FFGLRLLYIAW  K+D K SQKKEMEEVE
Sbjct: 124 VMTVLSTGLGRIVPNLISRKHTNSAATVLYLFFGLRLLYIAW--KSDPKGSQKKEMEEVE 183

Query: 194 EKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATHKNALGVAVGA 253
           EKLE+GQ K+T RRFF RFCTPIFLE+FILTFLAEWGDRSQIATIALATHKNA+GVAVGA
Sbjct: 184 EKLESGQGKSTLRRFFGRFCTPIFLEAFILTFLAEWGDRSQIATIALATHKNAIGVAVGA 243

Query: 254 ILGHSICTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL 299
            LGH++CTS+AVIGGSMLASKISQ TVAT+GG+LFLGFS+SSYF+PPL
Sbjct: 244 SLGHTVCTSLAVIGGSMLASKISQRTVATIGGVLFLGFSVSSYFYPPL 279

[Close]

BLAST of Moc08g38970 vs. ExPASy TrEMBL
Match: A0A6J1KA70 (putative pentatricopeptide repeat-containing protein At3g23330 OS=Cucurbita maxima OX=3661 GN=LOC111492492 PE=3 SV=1)

HSP 1 Score: 515.4 bits (1326), Expect = 1.6e-142
Identity = 274/298 (91.95%), Postives = 284/298 (95.30%), Query Frame = 0


Query: 1   MGLPSNPTGKLSLSPCFLLLLLLLPLFASVQVYSAEVENEELDGPKDLGRRSKISWGNRE 60
           MGL SNPTG LS SP  +LLLLL+ LFASVQVYSAEVE EELDGPKDLGRRSKISW N +
Sbjct: 1   MGLRSNPTGNLSFSPSLILLLLLVSLFASVQVYSAEVEKEELDGPKDLGRRSKISWNNVD 60

Query: 61  AVVVKKDGVDSENLNLDMDSIGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI 120
            +  KKD VDSE+LNLD+DS+GLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI
Sbjct: 61  TIAAKKDVVDSEDLNLDLDSVGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI 120

Query: 121 VLSGALTALIVMTVLSTGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRSKADSKT 180
           VLSGAL+ALIVMTVLSTGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRSKADSK+
Sbjct: 121 VLSGALSALIVMTVLSTGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRSKADSKS 180

Query: 181 SQKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATH 240
           S KKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATH
Sbjct: 181 STKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATH 240

Query: 241 KNALGVAVGAILGHSICTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL 299
           KNALGVAVGAILGHS+CTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL
Sbjct: 241 KNALGVAVGAILGHSVCTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL 298

[Close]

BLAST of Moc08g38970 vs. ExPASy TrEMBL
Match: A0A6J1EPP7 (putative pentatricopeptide repeat-containing protein At3g23330 OS=Cucurbita moschata OX=3662 GN=LOC111436248 PE=3 SV=1)

HSP 1 Score: 510.4 bits (1313), Expect = 5.2e-141
Identity = 272/298 (91.28%), Postives = 283/298 (94.97%), Query Frame = 0


Query: 1   MGLPSNPTGKLSLSPCFLLLLLLLPLFASVQVYSAEVENEELDGPKDLGRRSKISWGNRE 60
           MGL SNPTG LS SP  +LLLLL+ LFASVQV+SAEVE EELD PKDLGRRSKISW N +
Sbjct: 1   MGLRSNPTGNLSFSPSLILLLLLVSLFASVQVFSAEVEKEELDVPKDLGRRSKISWNNVD 60

Query: 61  AVVVKKDGVDSENLNLDMDSIGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI 120
            +  KKD VDSE+LNLD+DS+GLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI
Sbjct: 61  TIAAKKDVVDSEDLNLDLDSVGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI 120

Query: 121 VLSGALTALIVMTVLSTGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRSKADSKT 180
           VLSGAL+ALIVMTVLSTGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRSKADSK+
Sbjct: 121 VLSGALSALIVMTVLSTGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRSKADSKS 180

Query: 181 SQKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATH 240
           S KKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATH
Sbjct: 181 STKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATH 240

Query: 241 KNALGVAVGAILGHSICTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL 299
           KNALGVAVGAILGHS+CTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL
Sbjct: 241 KNALGVAVGAILGHSVCTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL 298

[Close]

BLAST of Moc08g38970 vs. ExPASy TrEMBL
Match: A0A5A7U3P6 (GDT1 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold105G00130 PE=3 SV=1)

HSP 1 Score: 508.8 bits (1309), Expect = 1.5e-140
Identity = 274/298 (91.95%), Postives = 281/298 (94.30%), Query Frame = 0


Query: 1   MGLPSNPTGKLSLSPCFLLLLLLLPLFASVQVYSAEVENEELDGPKDLGRRSKISWGNRE 60
           MGL SNPT  LS SP FLL LLLL LFAS+QVYSAE E +ELDGPKDLGRRSKISW N +
Sbjct: 1   MGLRSNPTTTLSFSPSFLLFLLLLSLFASIQVYSAEAEKDELDGPKDLGRRSKISWSNSD 60

Query: 61  AVVVKKDGVDSENLNLDMDSIGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI 120
            V  KKDGVDSE+LNLDMDSIGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI
Sbjct: 61  TVAAKKDGVDSEDLNLDMDSIGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI 120

Query: 121 VLSGALTALIVMTVLSTGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRSKADSKT 180
           VLSGAL ALIVMTVLSTGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRSK++ K+
Sbjct: 121 VLSGALAALIVMTVLSTGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRSKSE-KS 180

Query: 181 SQKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATH 240
           S KKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATH
Sbjct: 181 STKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATH 240

Query: 241 KNALGVAVGAILGHSICTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL 299
           KNALGVAVGAILGHSICTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL
Sbjct: 241 KNALGVAVGAILGHSICTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL 297

[Close]

BLAST of Moc08g38970 vs. ExPASy TrEMBL
Match: A0A1S3B4E3 (LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At3g23330 OS=Cucumis melo OX=3656 GN=LOC103485889 PE=3 SV=1)

HSP 1 Score: 508.8 bits (1309), Expect = 1.5e-140
Identity = 274/298 (91.95%), Postives = 281/298 (94.30%), Query Frame = 0


Query: 1   MGLPSNPTGKLSLSPCFLLLLLLLPLFASVQVYSAEVENEELDGPKDLGRRSKISWGNRE 60
           MGL SNPT  LS SP FLL LLLL LFAS+QVYSAE E +ELDGPKDLGRRSKISW N +
Sbjct: 1   MGLRSNPTTTLSFSPSFLLFLLLLSLFASIQVYSAEAEKDELDGPKDLGRRSKISWSNSD 60

Query: 61  AVVVKKDGVDSENLNLDMDSIGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI 120
            V  KKDGVDSE+LNLDMDSIGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI
Sbjct: 61  TVAAKKDGVDSEDLNLDMDSIGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI 120

Query: 121 VLSGALTALIVMTVLSTGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRSKADSKT 180
           VLSGAL ALIVMTVLSTGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRSK++ K+
Sbjct: 121 VLSGALAALIVMTVLSTGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRSKSE-KS 180

Query: 181 SQKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATH 240
           S KKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATH
Sbjct: 181 STKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATH 240

Query: 241 KNALGVAVGAILGHSICTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL 299
           KNALGVAVGAILGHSICTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL
Sbjct: 241 KNALGVAVGAILGHSICTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL 297

[Close]

BLAST of Moc08g38970 vs. ExPASy TrEMBL
Match: A0A0A0LMQ4 (GDT1 family protein OS=Cucumis sativus OX=3659 GN=Csa_2G074220 PE=3 SV=1)

HSP 1 Score: 501.1 bits (1289), Expect = 3.1e-138
Identity = 270/298 (90.60%), Postives = 279/298 (93.62%), Query Frame = 0


Query: 1   MGLPSNPTGKLSLSPCFLLLLLLLPLFASVQVYSAEVENEELDGPKDLGRRSKISWGNRE 60
           MGL SNPT  LS S  FLL LL L LFAS QVYSAEVE ++LDGPKDLGRRSK+SW N +
Sbjct: 1   MGLRSNPTATLSFSASFLLFLLFLSLFASHQVYSAEVEKDDLDGPKDLGRRSKMSWSNSD 60

Query: 61  AVVVKKDGVDSENLNLDMDSIGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI 120
            V  KKDGVDSE+LNLDMDSIGLGVFDAFFASLSMI+VSEIGDETFIIAALMAMRHPKSI
Sbjct: 61  TVATKKDGVDSEDLNLDMDSIGLGVFDAFFASLSMILVSEIGDETFIIAALMAMRHPKSI 120

Query: 121 VLSGALTALIVMTVLSTGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRSKADSKT 180
           VLSGAL ALIVMTVLSTGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRSK++ K+
Sbjct: 121 VLSGALAALIVMTVLSTGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRSKSE-KS 180

Query: 181 SQKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATH 240
           S KKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATH
Sbjct: 181 STKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATH 240

Query: 241 KNALGVAVGAILGHSICTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL 299
           KNALGVAVGAILGHSICTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL
Sbjct: 241 KNALGVAVGAILGHSICTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL 297

[Close]

BLAST of Moc08g38970 vs. TAIR 10
Match: AT5G36290.1 (Uncharacterized protein family (UPF0016) )

HSP 1 Score: 375.6 bits (963), Expect = 3.8e-104
Identity = 209/302 (69.21%), Postives = 242/302 (80.13%), Query Frame = 0


Query: 1   MGLPSNPTGKLSLSPCFLLLLLLLPLFASVQVYSAEVENEELD----GPKDLGRRSKISW 60
           MGL SNPT  + ++  F L+       +S+    + VEN E        K+LGRR  +  
Sbjct: 1   MGLISNPTRLILVATIFFLV-------SSISGQDSVVENNERQESEGSGKELGRRGMVG- 60

Query: 61  GNREAVVVKKDGVDSENLNLDMDSIGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRH 120
             R  V    D + +  LNLD+D+    VFDA F+S SMI+V+EIGDETFIIAALMAMRH
Sbjct: 61  TERIGVDTVVDNIGALGLNLDLDATAPSVFDALFSSFSMILVTEIGDETFIIAALMAMRH 120

Query: 121 PKSIVLSGALTALIVMTVLSTGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRSKA 180
           PK+ VLSGAL+AL VMT+LSTGLGRIVPNLISRKHTN+AATVLYAFFGLRLLYIAWRS  
Sbjct: 121 PKATVLSGALSALFVMTILSTGLGRIVPNLISRKHTNSAATVLYAFFGLRLLYIAWRS-T 180

Query: 181 DSKTSQKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIA 240
           DSK++QKKEMEEVEEKLE+GQ KT FRR F RFCTPIFLESFILTFLAEWGDRSQIATIA
Sbjct: 181 DSKSNQKKEMEEVEEKLESGQGKTPFRRLFSRFCTPIFLESFILTFLAEWGDRSQIATIA 240

Query: 241 LATHKNALGVAVGAILGHSICTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFP 299
           LATHKNA+GVA+GA +GH++CTS+AV+GGSMLAS+ISQ TVATVGGLLFLGFS+SSYF+P
Sbjct: 241 LATHKNAIGVAIGASIGHTVCTSLAVVGGSMLASRISQRTVATVGGLLFLGFSVSSYFYP 293

[Close]

BLAST of Moc08g38970 vs. TAIR 10
Match: AT5G36290.2 (Uncharacterized protein family (UPF0016) )

HSP 1 Score: 375.6 bits (963), Expect = 3.8e-104
Identity = 209/302 (69.21%), Postives = 242/302 (80.13%), Query Frame = 0


Query: 1   MGLPSNPTGKLSLSPCFLLLLLLLPLFASVQVYSAEVENEELD----GPKDLGRRSKISW 60
           MGL SNPT  + ++  F L+       +S+    + VEN E        K+LGRR  +  
Sbjct: 1   MGLISNPTRLILVATIFFLV-------SSISGQDSVVENNERQESEGSGKELGRRGMVG- 60

Query: 61  GNREAVVVKKDGVDSENLNLDMDSIGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRH 120
             R  V    D + +  LNLD+D+    VFDA F+S SMI+V+EIGDETFIIAALMAMRH
Sbjct: 61  TERIGVDTVVDNIGALGLNLDLDATAPSVFDALFSSFSMILVTEIGDETFIIAALMAMRH 120

Query: 121 PKSIVLSGALTALIVMTVLSTGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRSKA 180
           PK+ VLSGAL+AL VMT+LSTGLGRIVPNLISRKHTN+AATVLYAFFGLRLLYIAWRS  
Sbjct: 121 PKATVLSGALSALFVMTILSTGLGRIVPNLISRKHTNSAATVLYAFFGLRLLYIAWRS-T 180

Query: 181 DSKTSQKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIA 240
           DSK++QKKEMEEVEEKLE+GQ KT FRR F RFCTPIFLESFILTFLAEWGDRSQIATIA
Sbjct: 181 DSKSNQKKEMEEVEEKLESGQGKTPFRRLFSRFCTPIFLESFILTFLAEWGDRSQIATIA 240

Query: 241 LATHKNALGVAVGAILGHSICTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFP 299
           LATHKNA+GVA+GA +GH++CTS+AV+GGSMLAS+ISQ TVATVGGLLFLGFS+SSYF+P
Sbjct: 241 LATHKNAIGVAIGASIGHTVCTSLAVVGGSMLASRISQRTVATVGGLLFLGFSVSSYFYP 293

[Close]

BLAST of Moc08g38970 vs. TAIR 10
Match: AT1G25520.1 (Uncharacterized protein family (UPF0016) )

HSP 1 Score: 165.2 bits (417), Expect = 7.8e-41
Identity = 99/225 (44.00%), Postives = 140/225 (62.22%), Query Frame = 0


Query: 85  VFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSIVLSGALTALIVMTVLSTGLGRIVP 144
           V   F  SL+M  VSEIGD+TF  AA++AMR+P+ +VL+G L+ALIVMT+LS  LG   P
Sbjct: 4   VLQGFTKSLAMTFVSEIGDKTFFAAAILAMRYPRRLVLAGCLSALIVMTILSATLGWAAP 63

Query: 145 NLISRKHTNNAATVLYAFFGLRLLYIAWRSKADSKTSQKKEMEEVEEKLEA--------- 204
           NLISRK T++  T+L+  FGL  L+  ++          +E+ EVE +L+A         
Sbjct: 64  NLISRKWTHHITTLLFFGFGLWSLWDGFKEGGGG----SEELAEVEAELDADLKANGKSP 123

Query: 205 -------GQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATHKNALGVAV 264
                   ++K   R F  +F +PIFL++F + F  EWGD+SQ+ATI LA  +N  GV +
Sbjct: 124 KDSSKREDENKKQNRAFLTQFFSPIFLKAFSINFFGEWGDKSQLATIGLAADENPFGVVL 183

Query: 265 GAILGHSICTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSY 294
           G ++   +CT+ AVIGG  LAS+IS+  VA  GG+LF+ F + SY
Sbjct: 184 GGVVAQFLCTTAAVIGGKSLASQISERIVALSGGMLFIIFGIQSY 224

[Close]

BLAST of Moc08g38970 vs. TAIR 10
Match: AT1G68650.1 (Uncharacterized protein family (UPF0016) )

HSP 1 Score: 163.3 bits (412), Expect = 3.0e-40
Identity = 99/227 (43.61%), Postives = 140/227 (61.67%), Query Frame = 0


Query: 85  VFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSIVLSGALTALIVMTVLSTGLGRIVP 144
           +   F  SL+M  +SEIGD+TF  AA++AMR+P+ +VL+G L+ALIVMT+LS  LG   P
Sbjct: 4   LLQGFTKSLAMTFLSEIGDKTFFAAAILAMRYPRRLVLAGCLSALIVMTILSATLGWAAP 63

Query: 145 NLISRKHTNNAATVLYAFFGLRLLYIAWRSKADSKTSQKKEMEEVEEKLEAGQSKTT--- 204
           NLISRK T++  T L+  FGL  L+  ++    S     +E+ EVE +L++   KT    
Sbjct: 64  NLISRKWTHHITTFLFFGFGLWSLWDGFKEGGGS-----EELAEVEAELDSDLKKTNDQS 123

Query: 205 ------------FRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATHKNALGVAVG 264
                        R F   F +PIFL++F + F  EWGD+SQ+ATI LA  +N LGV +G
Sbjct: 124 KNSKIEDEQKKQKRPFLTAFFSPIFLKAFSINFFGEWGDKSQLATIGLAADENPLGVVLG 183

Query: 265 AILGHSICTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFP 297
            I+  ++CT+ AV+GG  LAS+IS+  VA  GG+LF+ F + S   P
Sbjct: 184 GIVAQTLCTTAAVLGGKSLASQISERIVALSGGMLFIIFGIQSLLTP 225

[Close]

BLAST of Moc08g38970 vs. TAIR 10
Match: AT4G13590.1 (Uncharacterized protein family (UPF0016) )

HSP 1 Score: 132.9 bits (333), Expect = 4.3e-31
Identity = 91/217 (41.94%), Postives = 132/217 (60.83%), Query Frame = 0


Query: 89  FFASLSMIIVSEIGDETFIIAALMAMRHPKSIVLSGALTALIVMTVLSTGLGRIVPNLIS 148
           F A+ S+I VSEIGD+TF IAAL+AM++ K++VL G++ AL +MT+LS  +G+I  ++ +
Sbjct: 146 FTAAFSLIFVSEIGDKTFFIAALLAMQYEKTLVLLGSMGALSLMTILSVVIGKIFQSVPA 205

Query: 149 RKHT-----NNAATVLYAFFGLRLLYIAW-----RSKADSKTS-QKKEMEEVEEKLEAGQ 208
           +  T       AA  L  FFGL+ +  AW      +K   +T  +  E  E EE ++   
Sbjct: 206 QFQTTLPIGEYAAIALLMFFGLKSIKDAWDLPPVEAKNGEETGIELGEYSEAEELVKEKA 265

Query: 209 SKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATHKNALGVAVGAILGHSIC 268
           SK       L     I  +SF L F AEWGDRS +AT+AL   ++ LGVA GAI GH + 
Sbjct: 266 SKK------LTNPLEILWKSFSLVFFAEWGDRSMLATVALGAAQSPLGVASGAIAGHLVA 325

Query: 269 TSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYF 295
           T +A++GG+ LA+ IS+  V  VGG LFL F+ +++F
Sbjct: 326 TVLAIMGGAFLANYISEKLVGYVGGALFLVFAAATFF 356

The following BLAST results are available for this feature:

BLAST of Moc08g38970 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022997610.1	3.3e-142	91.95	putative pentatricopeptide repeat-containing protein At3g23330 [Cucurbita maxima...	[more]
XP_023545881.1	2.1e-141	91.28	putative pentatricopeptide repeat-containing protein At3g23330 [Cucurbita pepo s...	[more]
KAG6598935.1	1.1e-140	91.28	GDT1-like protein 3, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022929759.1	1.1e-140	91.28	putative pentatricopeptide repeat-containing protein At3g23330 [Cucurbita moscha...	[more]
XP_008441858.1	3.1e-140	91.95	PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing pro...	[more]

BLAST of Moc08g38970 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93Y38	5.4e-103	69.21	GDT1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=At5g36290 PE=2 SV=1	[more]
Q6ZIB9	2.0e-102	74.65	GDT1-like protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0528500 PE=...	[more]
A2YXC7	1.3e-101	74.20	GDT1-like protein 4 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_29993 PE=3 SV=...	[more]
A2ZE50	5.6e-100	72.57	GDT1-like protein 3 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_36063 PE=3 SV=...	[more]
Q2R4J1	5.6e-100	72.57	GDT1-like protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os11g0472500 PE=...	[more]

BLAST of Moc08g38970 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KA70	1.6e-142	91.95	putative pentatricopeptide repeat-containing protein At3g23330 OS=Cucurbita maxi...	[more]
A0A6J1EPP7	5.2e-141	91.28	putative pentatricopeptide repeat-containing protein At3g23330 OS=Cucurbita mosc...	[more]
A0A5A7U3P6	1.5e-140	91.95	GDT1 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold105G...	[more]
A0A1S3B4E3	1.5e-140	91.95	LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At3g23...	[more]
A0A0A0LMQ4	3.1e-138	90.60	GDT1 family protein OS=Cucumis sativus OX=3659 GN=Csa_2G074220 PE=3 SV=1	[more]

BLAST of Moc08g38970 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G36290.1	3.8e-104	69.21	Uncharacterized protein family (UPF0016)	[more]
AT5G36290.2	3.8e-104	69.21	Uncharacterized protein family (UPF0016)	[more]
AT1G25520.1	7.8e-41	44.00	Uncharacterized protein family (UPF0016)	[more]
AT1G68650.1	3.0e-40	43.61	Uncharacterized protein family (UPF0016)	[more]
AT4G13590.1	4.3e-31	41.94	Uncharacterized protein family (UPF0016)	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 179..199
None	No IPR available	PANTHER	PTHR12608:SF9	GDT1-LIKE PROTEIN 3	coord: 18..296
IPR001727	Gdt1 family	PFAM	PF01169	UPF0016	coord: 91..164 e-value: 6.4E-18 score: 64.8 coord: 216..288 e-value: 2.6E-20 score: 72.5
IPR001727	Gdt1 family	PANTHER	PTHR12608	TRANSMEMBRANE PROTEIN HTP-1 RELATED	coord: 18..296

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc08g38970.1	Moc08g38970.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0070588	calcium ion transmembrane transport
biological_process	GO:0032468	Golgi calcium ion homeostasis
biological_process	GO:0032472	Golgi calcium ion transport
biological_process	GO:0071421	manganese ion transmembrane transport
biological_process	GO:0051028	mRNA transport
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0015085	calcium ion transmembrane transporter activity
molecular_function	GO:0005384	manganese ion transmembrane transporter activity
molecular_function	GO:0008270	zinc ion binding