Moc08g38950 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc08g38950
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	PSI subunit V
Location	chr8: 29379533 .. 29382633 (+)
RNA-Seq Expression	Moc08g38950
Synteny	Moc08g38950

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATAATTTCTTTGGATCATTCTTCGTTTTCGAGGGGCAACCTGCCCATACAGCCAGCGGGGAGGATGGCACTACTGGCAAAGACCGTCTGGCGGCCGCAGGCGCGAAGCGTGGTAGGCCTGCGCTGGGGGAGCATAGCATAGGCGGGAAAGGTGGAAGAGCCAGGGGAGGCCGGGTCATTTGACGGAAATGGAAGGCTTTTCCCCTATTAGAAAAGGCCCTATGAAGTAAAGGGAAGTGCATCAATTCTTGGAAAAAGAGGGAGCGAGCCCATAGAAAAAATCTAAGAAAGTCAATTCAATGAATAGATCTCGAGTCAACGGTACGACAGACAGCGCTGCCTACACGTGAATTAGCTTCCGAGGTCAAGCAGTCTCAATTTCACTACAGGATTGATTTGCGAATGAATGCTGGGCTGGGCCACCTCGAATGGCGACAAAAATTGGCCAAAAGGGTTTAATAGTTTTTGGATTTCTTGATTACTAATTGTGAATTTTAGTTTTAGTTGTGCTCTAGGTTTTATTTTGATTATGATGATGTAGTTTGTTTCATGAATTATTTTATATTTTATATTTTTATTAATAAAGTTATTTCCTTTTGTTCAATTATTCATTTTCAACTTAATAATGCTTGATCATCAATTATATATTCATGAAAATTGAATCATTTTTAGGGATAATTTACAAATATTTTTCATTTTTAATATACAATTTATTTAAGATTTGTTGGAAGAATGTTGTTGTTTTGAGAAGTCATCCTATCATTAAATTTAAAACATTCCCTGTCAGAAATCAACTCTTGAAAAACGATCTTTTCAACTACTAAATAAAATATTTACGTTTCTCAAAATTTTGAGAAAAAAAATATGAAAAAATGAAAAATAAAAAATAAAAAATTTTTTAGGTGTAGTGATTTACCTTTTTGGTTTTACACTGAGGGCTGTATGGTAACGTTCCCGTTTCTTGTTCTATAGACATGTTTGGTAACTCATCTCGTTTCTAAATTTTGAGAAACATTAAAAAAAAAAGAGGCTTTAGTTTCCATTTTCGTGTCTAGAGGCAGATTTAGATTAAATAATATATATTGTAAATCATTGATCAAAACGATCCAAACGAGGTTCGCTAGTGTAAAGTGTGCACTTGTAGTTAAGAGGTCGTGAGTTTTAATATTCTCTCCACGACTTTATCAAACAAGTCCTAAAAGTCCCGAAATTGAACACTATTCACATTGTATCATTTCTTCAACCCGCTATTTTAACACTATACATAAAACTACCGTACTGTCCAAAATATTTTAGAACCTACCCTATATTTCTTAATTTCTACACAAAACCCAACATAACTTACCCTCCCAAATCTATTTACATTACCCAATTTTGAGTCTAATATAAGTTGATGCGAATTCGCATCAGCAACATCTCCAAGGTTTAAATTCAACCTTTCCTAAAAGTTGAAGGTTTAAATTCTCTAACTCCACACATCCTTGTTGTACTAAAAAGCACTTAAACATGTTAAATAGCTAGATCAAAGATAATCTACTAGAAATGTCCACTGTGTGAAAATCTAAACATGTCCAATGACCAAAGATCTAAAACGGTAAAATTTGTAAATATTGGACATTTGTGAAAATAAGTTTTCAAAATAGCTCATCCAAGACATTATCTCTCATATCGAGAGAGAGACCCAAATCCAAAATTTTCAAGCCCACTTGGGCCAGCCCATTTTCCCATGAGAGAGAGAGAGAAATGGATAAGGGATAAGGTTATGTGGCAACTTCCATCCAATGAGAAGGGAGAGGTTTGATCAACCACAGCCTCCCACAAATTTCCATGGCCACCAATGCAAATCTAACCCCCAAAATGAATCTAAAAATCTCACCTCATTCTTCTTCTCTGCCATTCAACTAACTGATCCTTTCACAAGCAGCAGCCATGGCCACTGCAACCTCTCCCATAGCCAGCCAGCTCAGTTCCAGCTTTGCTTCTTCCAACACCAGAGCCTTAATCTCTCCGAAAGGCCTCTCCGCTTCGCCGCTCCGACGAGTCCCTGCAAGAACACACTCCTTCACCATCAGAGCCATCCAAGCTGATAAGGTAAACAACTCCCATTTTGCAAATCTAAGTAATTTCATTGAATGTAGATAAAGCCATTGGTTTATTGAATTGTATATTAAGAGAGTGACTAGTATGAGGAAGTGCTTATGAGGAGAGTGATAAGTAAGAGAAAGTAAACATGTACTGAAAAGAGAGATTAACCAAATCAGGTGTAACAAAAATCATTTGTAGACATTAAGGAAAGAAATTGTGTAATGAAAGAGCCATTTCTTTATTGGATAATAAGAGTATGACAGTTTTATAATGATGTAAAATTATGTCCTATTTATACTAATCATTCAATAATTAACATATGATATACTCAATAAATGATTTACATTGAACATGCTTGTTGACTAGATTCAAATCACTGATTACCTAGTATATCTAATGTTAATTATTGGTTTGTTAGAGATAACAAAGAATTAGACCGTATTTGCAATCAATTATCATTTGAATTTGGTTCATTTTTCAACCAGAATAGTATCCCATACCTGATTATGTTTCACTTGCAGCCCACTTACCAAGTGATCCAACCCATCAATGGAGACCCATTCATTGGAAGCCTTGAGACTCCAGTAACCTCAAGCCCACTGATAGCCTGGTACCTCTCAAATCTCCCAGCCTACAGAACAGCAGTCAGCCCACTGCTGAGGGGAATTGAAGTGGGCCTGGCCCATGGTTTTTTTCTCGTCGGCCCATTTGTCAAAGCTGGGCCTCTGAGGAACACCGCCTACGCCGGAGGAGCCGGCTCACTGGCCGCCGGCGGCCTCATTGTCATTCTCAGCATCTGCTTGACAATGTATGGTGTTGCATCCTTCAATGAAGGAGAGCCATCCACTGCACCATCGTTGACCTTGACTGGCCGGAAGAAGGCCCCGGATCAGCTCCAAACAGCCGACGGATGGGCGAAATTCTCCGGCGGATTCTTCTTCGGAGGCATCTCCGGCGTCATCTGGGCCTACTTCCTCCTCTATGTCTTGGACCTCCCTTACTTCGTCAAGTAG

mRNA sequence

ATGTATAATTTCTTTGGATCATTCTTCGTTTTCGAGGGGCAACCTGCCCATACAGCCAGCGGGGAGGATGGCACTACTGGCAAAGACCGTCTGGCGGCCGCAGGCGCGAAGCGTGGTAGGCCTGCGCTGGGGGAGCATAGCATAGGCGGGAAAGCAGCCATGGCCACTGCAACCTCTCCCATAGCCAGCCAGCTCAGTTCCAGCTTTGCTTCTTCCAACACCAGAGCCTTAATCTCTCCGAAAGGCCTCTCCGCTTCGCCGCTCCGACGAGTCCCTGCAAGAACACACTCCTTCACCATCAGAGCCATCCAAGCTGATAAGCCCACTTACCAAGTGATCCAACCCATCAATGGAGACCCATTCATTGGAAGCCTTGAGACTCCAGTAACCTCAAGCCCACTGATAGCCTGGTACCTCTCAAATCTCCCAGCCTACAGAACAGCAGTCAGCCCACTGCTGAGGGGAATTGAAGTGGGCCTGGCCCATGGTTTTTTTCTCGTCGGCCCATTTGTCAAAGCTGGGCCTCTGAGGAACACCGCCTACGCCGGAGGAGCCGGCTCACTGGCCGCCGGCGGCCTCATTGTCATTCTCAGCATCTGCTTGACAATGTATGGTGTTGCATCCTTCAATGAAGGAGAGCCATCCACTGCACCATCGTTGACCTTGACTGGCCGGAAGAAGGCCCCGGATCAGCTCCAAACAGCCGACGGATGGGCGAAATTCTCCGGCGGATTCTTCTTCGGAGGCATCTCCGGCGTCATCTGGGCCTACTTCCTCCTCTATGTCTTGGACCTCCCTTACTTCGTCAAGTAG

Coding sequence (CDS)

ATGTATAATTTCTTTGGATCATTCTTCGTTTTCGAGGGGCAACCTGCCCATACAGCCAGCGGGGAGGATGGCACTACTGGCAAAGACCGTCTGGCGGCCGCAGGCGCGAAGCGTGGTAGGCCTGCGCTGGGGGAGCATAGCATAGGCGGGAAAGCAGCCATGGCCACTGCAACCTCTCCCATAGCCAGCCAGCTCAGTTCCAGCTTTGCTTCTTCCAACACCAGAGCCTTAATCTCTCCGAAAGGCCTCTCCGCTTCGCCGCTCCGACGAGTCCCTGCAAGAACACACTCCTTCACCATCAGAGCCATCCAAGCTGATAAGCCCACTTACCAAGTGATCCAACCCATCAATGGAGACCCATTCATTGGAAGCCTTGAGACTCCAGTAACCTCAAGCCCACTGATAGCCTGGTACCTCTCAAATCTCCCAGCCTACAGAACAGCAGTCAGCCCACTGCTGAGGGGAATTGAAGTGGGCCTGGCCCATGGTTTTTTTCTCGTCGGCCCATTTGTCAAAGCTGGGCCTCTGAGGAACACCGCCTACGCCGGAGGAGCCGGCTCACTGGCCGCCGGCGGCCTCATTGTCATTCTCAGCATCTGCTTGACAATGTATGGTGTTGCATCCTTCAATGAAGGAGAGCCATCCACTGCACCATCGTTGACCTTGACTGGCCGGAAGAAGGCCCCGGATCAGCTCCAAACAGCCGACGGATGGGCGAAATTCTCCGGCGGATTCTTCTTCGGAGGCATCTCCGGCGTCATCTGGGCCTACTTCCTCCTCTATGTCTTGGACCTCCCTTACTTCGTCAAGTAG

Protein sequence

MYNFFGSFFVFEGQPAHTASGEDGTTGKDRLAAAGAKRGRPALGEHSIGGKAAMATATSPIASQLSSSFASSNTRALISPKGLSASPLRRVPARTHSFTIRAIQADKPTYQVIQPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKAGPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKAPDQLQTADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK

Homology

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BLAST of Moc08g38950 vs. NCBI nr
Match: XP_022149833.1 (photosystem I reaction center subunit XI, chloroplastic [Momordica charantia])

HSP 1 Score: 423.3 bits (1087), Expect = 1.6e-114
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 54  MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRVPARTHSFTIRAIQADKPTYQVI 113
           MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRVPARTHSFTIRAIQADKPTYQVI
Sbjct: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRVPARTHSFTIRAIQADKPTYQVI 60

Query: 114 QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 173
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA
Sbjct: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120

Query: 174 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKAPDQLQ 233
           GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKAPDQLQ
Sbjct: 121 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKAPDQLQ 180

Query: 234 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK 271
           TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK
Sbjct: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK 217

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BLAST of Moc08g38950 vs. NCBI nr
Match: XP_022965497.1 (photosystem I reaction center subunit XI, chloroplastic [Cucurbita maxima])

HSP 1 Score: 417.9 bits (1073), Expect = 6.5e-113
Identity = 213/217 (98.16%), Postives = 215/217 (99.08%), Query Frame = 0


Query: 54  MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRVPARTHSFTIRAIQADKPTYQVI 113
           MATATSPIASQLSS+F SSNTRALI+PKGLSASPLRRVPARTHSFTIRAIQADKPTYQVI
Sbjct: 1   MATATSPIASQLSSAFTSSNTRALIAPKGLSASPLRRVPARTHSFTIRAIQADKPTYQVI 60

Query: 114 QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 173
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA
Sbjct: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120

Query: 174 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKAPDQLQ 233
           GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKK PDQLQ
Sbjct: 121 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDQLQ 180

Query: 234 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK 271
           TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK
Sbjct: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK 217

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BLAST of Moc08g38950 vs. NCBI nr
Match: XP_008441854.1 (PREDICTED: photosystem I reaction center subunit XI, chloroplastic [Cucumis melo])

HSP 1 Score: 416.4 bits (1069), Expect = 1.9e-112
Identity = 212/217 (97.70%), Postives = 214/217 (98.62%), Query Frame = 0


Query: 54  MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRVPARTHSFTIRAIQADKPTYQVI 113
           MATATSPIASQLSSSFASSNTRALISPKGLSASPLRR+P RTHSFTIRAIQADKPTYQVI
Sbjct: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPTYQVI 60

Query: 114 QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 173
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA
Sbjct: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120

Query: 174 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKAPDQLQ 233
           GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKK PD LQ
Sbjct: 121 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQ 180

Query: 234 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK 271
           TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPY+VK
Sbjct: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 217

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BLAST of Moc08g38950 vs. NCBI nr
Match: XP_023536879.1 (photosystem I reaction center subunit XI, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023538619.1 photosystem I reaction center subunit XI, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 416.4 bits (1069), Expect = 1.9e-112
Identity = 212/217 (97.70%), Postives = 214/217 (98.62%), Query Frame = 0


Query: 54  MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRVPARTHSFTIRAIQADKPTYQVI 113
           MATATSPIASQLSS+F SSNTRALI+PKGLS SPLRRVPARTHSFTIRAIQADKPTYQVI
Sbjct: 1   MATATSPIASQLSSAFTSSNTRALIAPKGLSVSPLRRVPARTHSFTIRAIQADKPTYQVI 60

Query: 114 QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 173
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA
Sbjct: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120

Query: 174 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKAPDQLQ 233
           GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKK PDQLQ
Sbjct: 121 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDQLQ 180

Query: 234 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK 271
           TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK
Sbjct: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK 217

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BLAST of Moc08g38950 vs. NCBI nr
Match: XP_038889551.1 (photosystem I reaction center subunit XI, chloroplastic [Benincasa hispida])

HSP 1 Score: 415.6 bits (1067), Expect = 3.2e-112
Identity = 212/217 (97.70%), Postives = 214/217 (98.62%), Query Frame = 0


Query: 54  MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRVPARTHSFTIRAIQADKPTYQVI 113
           MATATSPIASQLSSSFASSNTRALISPKGLSASPLRR+P RTHSFTIRAIQADKPTYQVI
Sbjct: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPTYQVI 60

Query: 114 QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 173
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA
Sbjct: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120

Query: 174 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKAPDQLQ 233
           GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKK PD LQ
Sbjct: 121 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKNPDPLQ 180

Query: 234 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK 271
           TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPY+VK
Sbjct: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 217

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BLAST of Moc08g38950 vs. ExPASy Swiss-Prot
Match: Q39654 (Photosystem I reaction center subunit XI, chloroplastic OS=Cucumis sativus OX=3659 GN=PSAL PE=2 SV=1)

HSP 1 Score: 412.5 bits (1059), Expect = 3.6e-114
Identity = 209/217 (96.31%), Postives = 213/217 (98.16%), Query Frame = 0


Query: 54  MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRVPARTHSFTIRAIQADKPTYQVI 113
           MATATSP ASQLSSSFASSNTRALISPKGLSASPLRR+P RTHSFTIRAIQADKPT+QVI
Sbjct: 1   MATATSPTASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPTFQVI 60

Query: 114 QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 173
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA
Sbjct: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120

Query: 174 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKAPDQLQ 233
           GPLRNTAYAGGAGSLAAGGLIVILS+CLTMYGVASFNEGEPSTAPSLTLTGRKK PD LQ
Sbjct: 121 GPLRNTAYAGGAGSLAAGGLIVILSVCLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQ 180

Query: 234 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK 271
           TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPY+VK
Sbjct: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 217

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BLAST of Moc08g38950 vs. ExPASy Swiss-Prot
Match: Q9SUI4 (Photosystem I reaction center subunit XI, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSAL PE=1 SV=2)

HSP 1 Score: 342.0 bits (876), Expect = 6.0e-93
Identity = 172/219 (78.54%), Postives = 195/219 (89.04%), Query Frame = 0


Query: 54  MATATSPIASQLSSSFASSN-TRALISPKGLSASPLRRVPA-RTHSFTIRAIQADKPTYQ 113
           MA + SP+ASQL SSF+S++ ++ L  PKG+S +P    P  R  SFT+RA+++DK T+Q
Sbjct: 1   MAASASPMASQLRSSFSSASLSQRLAVPKGISGAPFGVSPTKRVSSFTVRAVKSDKTTFQ 60

Query: 114 VIQPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFV 173
           V+QPINGDPFIGSLETPVTSSPLIAWYLSNLP YRTAV+PLLRG+EVGLAHGFFLVGPFV
Sbjct: 61  VVQPINGDPFIGSLETPVTSSPLIAWYLSNLPGYRTAVNPLLRGVEVGLAHGFFLVGPFV 120

Query: 174 KAGPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKAPDQ 233
           KAGPLRNTAYAG AGSLAA GL+VILS+CLT+YG++SF EGEPS APSLTLTGRKK PDQ
Sbjct: 121 KAGPLRNTAYAGSAGSLAAAGLVVILSMCLTIYGISSFKEGEPSIAPSLTLTGRKKQPDQ 180

Query: 234 LQTADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK 271
           LQTADGWAKF+GGFFFGGISGV WAYFLLYVLDLPYFVK
Sbjct: 181 LQTADGWAKFTGGFFFGGISGVTWAYFLLYVLDLPYFVK 219

[Close]

BLAST of Moc08g38950 vs. ExPASy Swiss-Prot
Match: Q41385 (Photosystem I reaction center subunit XI, chloroplastic OS=Spinacia oleracea OX=3562 GN=PSAL PE=1 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 3.3e-91
Identity = 169/219 (77.17%), Postives = 189/219 (86.30%), Query Frame = 0


Query: 54  MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRVPA--RTHSFTIRAIQADKPTYQ 113
           MA  TSP+ASQL S F    T+AL+ PKG+S   LR  P+  R  SFT+RAI+ +KPTYQ
Sbjct: 1   MAATTSPMASQLKSGF---TTKALVVPKGISGPALRGFPSPRRHTSFTVRAIKTEKPTYQ 60

Query: 114 VIQPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFV 173
           VIQP+NGDPFIG LETPVTSSPLIAWYLSNLPAYRTAV+PLLRG+EVGLAHGF LVGPFV
Sbjct: 61  VIQPLNGDPFIGGLETPVTSSPLIAWYLSNLPAYRTAVNPLLRGVEVGLAHGFLLVGPFV 120

Query: 174 KAGPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKAPDQ 233
           KAGPLRNT YAG AGSLAA GL+VILS+CLTMYG+ASF EGEPS AP+LTLTGRKK PDQ
Sbjct: 121 KAGPLRNTEYAGAAGSLAAAGLVVILSMCLTMYGIASFKEGEPSIAPALTLTGRKKQPDQ 180

Query: 234 LQTADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK 271
           LQ+ADGWAKF+GGFFFGG+SGV WA FL+YVLDLPY+ K
Sbjct: 181 LQSADGWAKFTGGFFFGGVSGVTWACFLMYVLDLPYYFK 216

[Close]

BLAST of Moc08g38950 vs. ExPASy Swiss-Prot
Match: P23993 (Photosystem I reaction center subunit XI, chloroplastic OS=Hordeum vulgare OX=4513 GN=PSAL PE=1 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 4.4e-80
Identity = 154/218 (70.64%), Postives = 177/218 (81.19%), Query Frame = 0


Query: 54  MATA-TSPIASQLSSSFASSNTRALISPKGLSASPLRRVPARTHSFTIRAIQADKPTYQV 113
           MATA   P+ASQ+  S       A   P+G+S + L R P     F ++A+++DKPTYQV
Sbjct: 1   MATAYAPPMASQVMKS-----GLACSKPRGMSGASLTRRP----RFVVKAVKSDKPTYQV 60

Query: 114 IQPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVK 173
           +QPINGDPFIGSLETPVTSSPL+AWYLSNLPAYRTAVSPLLRGIEVGLAHG+ LVGPF  
Sbjct: 61  VQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFAL 120

Query: 174 AGPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKAPDQL 233
            GPLRNT   G AG+L A GL+ ILS+CLTMYGVASFNEGEPSTAP LTLTGRKK  D+L
Sbjct: 121 TGPLRNTPVHGQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKL 180

Query: 234 QTADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK 271
           QTA+GW++F+GGFFFGG+SG +WAYFLLYVLDLPYF K
Sbjct: 181 QTAEGWSQFTGGFFFGGVSGAVWAYFLLYVLDLPYFFK 209

[Close]

BLAST of Moc08g38950 vs. ExPASy Swiss-Prot
Match: Q6B8P4 (Photosystem I reaction center subunit XI OS=Gracilaria tenuistipitata var. liui OX=285951 GN=psaL PE=3 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.4e-33
Identity = 75/148 (50.68%), Postives = 99/148 (66.89%), Query Frame = 0


Query: 113 IQPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVK 172
           IQ  N DPF+G+L TPV++S      L+NLPAYR  +SPLLRG+E+G+AHG+FLVGPF K
Sbjct: 5   IQSYNNDPFLGNLSTPVSTSTFTKGLLNNLPAYRRGLSPLLRGLEIGMAHGYFLVGPFDK 64

Query: 173 AGPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKAPDQL 232
            GPLRNT  A  +G L+A GLI+IL++CL+MYG  SF++ +              A D L
Sbjct: 65  LGPLRNTDVALLSGFLSAVGLIIILTVCLSMYGNVSFDKDD--------------AKDLL 124

Query: 233 QTADGWAKFSGGFFFGGISGVIWAYFLL 261
           QT +GW +F+ GF  G + G  +AY LL
Sbjct: 125 QTTEGWGQFTAGFLVGAVGGSGFAYLLL 138

[Close]

BLAST of Moc08g38950 vs. ExPASy TrEMBL
Match: A0A6J1D7U0 (PSI subunit V OS=Momordica charantia OX=3673 GN=LOC111018169 PE=3 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 7.5e-115
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 54  MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRVPARTHSFTIRAIQADKPTYQVI 113
           MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRVPARTHSFTIRAIQADKPTYQVI
Sbjct: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRVPARTHSFTIRAIQADKPTYQVI 60

Query: 114 QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 173
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA
Sbjct: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120

Query: 174 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKAPDQLQ 233
           GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKAPDQLQ
Sbjct: 121 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKAPDQLQ 180

Query: 234 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK 271
           TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK
Sbjct: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK 217

[Close]

BLAST of Moc08g38950 vs. ExPASy TrEMBL
Match: A0A6J1HKH3 (PSI subunit V OS=Cucurbita maxima OX=3661 GN=LOC111465381 PE=3 SV=1)

HSP 1 Score: 417.9 bits (1073), Expect = 3.2e-113
Identity = 213/217 (98.16%), Postives = 215/217 (99.08%), Query Frame = 0


Query: 54  MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRVPARTHSFTIRAIQADKPTYQVI 113
           MATATSPIASQLSS+F SSNTRALI+PKGLSASPLRRVPARTHSFTIRAIQADKPTYQVI
Sbjct: 1   MATATSPIASQLSSAFTSSNTRALIAPKGLSASPLRRVPARTHSFTIRAIQADKPTYQVI 60

Query: 114 QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 173
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA
Sbjct: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120

Query: 174 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKAPDQLQ 233
           GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKK PDQLQ
Sbjct: 121 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDQLQ 180

Query: 234 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK 271
           TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK
Sbjct: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK 217

[Close]

BLAST of Moc08g38950 vs. ExPASy TrEMBL
Match: A0A1S3B555 (PSI subunit V OS=Cucumis melo OX=3656 GN=LOC103485887 PE=3 SV=1)

HSP 1 Score: 416.4 bits (1069), Expect = 9.2e-113
Identity = 212/217 (97.70%), Postives = 214/217 (98.62%), Query Frame = 0


Query: 54  MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRVPARTHSFTIRAIQADKPTYQVI 113
           MATATSPIASQLSSSFASSNTRALISPKGLSASPLRR+P RTHSFTIRAIQADKPTYQVI
Sbjct: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPTYQVI 60

Query: 114 QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 173
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA
Sbjct: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120

Query: 174 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKAPDQLQ 233
           GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKK PD LQ
Sbjct: 121 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQ 180

Query: 234 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK 271
           TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPY+VK
Sbjct: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 217

[Close]

BLAST of Moc08g38950 vs. ExPASy TrEMBL
Match: A0A0A0LHJ8 (PSI subunit V OS=Cucumis sativus OX=3659 GN=Csa_2G074240 PE=3 SV=1)

HSP 1 Score: 414.5 bits (1064), Expect = 3.5e-112
Identity = 210/217 (96.77%), Postives = 214/217 (98.62%), Query Frame = 0


Query: 54  MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRVPARTHSFTIRAIQADKPTYQVI 113
           MATATSPIASQLSSSFASSNTRALISPKGLSASPLRR+P RTHSFTIRAIQADKPT+QVI
Sbjct: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPTFQVI 60

Query: 114 QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 173
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA
Sbjct: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120

Query: 174 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKAPDQLQ 233
           GPLRNTAYAGGAGSLAAGGLIVILS+CLTMYGVASFNEGEPSTAPSLTLTGRKK PD LQ
Sbjct: 121 GPLRNTAYAGGAGSLAAGGLIVILSVCLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQ 180

Query: 234 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK 271
           TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPY+VK
Sbjct: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 217

[Close]

BLAST of Moc08g38950 vs. ExPASy TrEMBL
Match: A0A6J1FBZ4 (PSI subunit V OS=Cucurbita moschata OX=3662 GN=LOC111444030 PE=3 SV=1)

HSP 1 Score: 414.5 bits (1064), Expect = 3.5e-112
Identity = 210/217 (96.77%), Postives = 214/217 (98.62%), Query Frame = 0


Query: 54  MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRVPARTHSFTIRAIQADKPTYQVI 113
           MA+ATSPIASQLSS+F SSNTRALI+PKGLS SPLRR+PARTHSFTIRAIQADKPTYQVI
Sbjct: 1   MASATSPIASQLSSAFTSSNTRALIAPKGLSVSPLRRIPARTHSFTIRAIQADKPTYQVI 60

Query: 114 QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 173
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA
Sbjct: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120

Query: 174 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKAPDQLQ 233
           GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKK PDQLQ
Sbjct: 121 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDQLQ 180

Query: 234 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK 271
           TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK
Sbjct: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK 217

[Close]

BLAST of Moc08g38950 vs. TAIR 10
Match: AT4G12800.1 (photosystem I subunit l )

HSP 1 Score: 342.0 bits (876), Expect = 4.2e-94
Identity = 172/219 (78.54%), Postives = 195/219 (89.04%), Query Frame = 0


Query: 54  MATATSPIASQLSSSFASSN-TRALISPKGLSASPLRRVPA-RTHSFTIRAIQADKPTYQ 113
           MA + SP+ASQL SSF+S++ ++ L  PKG+S +P    P  R  SFT+RA+++DK T+Q
Sbjct: 1   MAASASPMASQLRSSFSSASLSQRLAVPKGISGAPFGVSPTKRVSSFTVRAVKSDKTTFQ 60

Query: 114 VIQPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFV 173
           V+QPINGDPFIGSLETPVTSSPLIAWYLSNLP YRTAV+PLLRG+EVGLAHGFFLVGPFV
Sbjct: 61  VVQPINGDPFIGSLETPVTSSPLIAWYLSNLPGYRTAVNPLLRGVEVGLAHGFFLVGPFV 120

Query: 174 KAGPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKAPDQ 233
           KAGPLRNTAYAG AGSLAA GL+VILS+CLT+YG++SF EGEPS APSLTLTGRKK PDQ
Sbjct: 121 KAGPLRNTAYAGSAGSLAAAGLVVILSMCLTIYGISSFKEGEPSIAPSLTLTGRKKQPDQ 180

Query: 234 LQTADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK 271
           LQTADGWAKF+GGFFFGGISGV WAYFLLYVLDLPYFVK
Sbjct: 181 LQTADGWAKFTGGFFFGGISGVTWAYFLLYVLDLPYFVK 219

The following BLAST results are available for this feature:

BLAST of Moc08g38950 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022149833.1	1.6e-114	100.00	photosystem I reaction center subunit XI, chloroplastic [Momordica charantia]	[more]
XP_022965497.1	6.5e-113	98.16	photosystem I reaction center subunit XI, chloroplastic [Cucurbita maxima]	[more]
XP_008441854.1	1.9e-112	97.70	PREDICTED: photosystem I reaction center subunit XI, chloroplastic [Cucumis melo...	[more]
XP_023536879.1	1.9e-112	97.70	photosystem I reaction center subunit XI, chloroplastic [Cucurbita pepo subsp. p...	[more]
XP_038889551.1	3.2e-112	97.70	photosystem I reaction center subunit XI, chloroplastic [Benincasa hispida]	[more]

BLAST of Moc08g38950 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39654	3.6e-114	96.31	Photosystem I reaction center subunit XI, chloroplastic OS=Cucumis sativus OX=36...	[more]
Q9SUI4	6.0e-93	78.54	Photosystem I reaction center subunit XI, chloroplastic OS=Arabidopsis thaliana ...	[more]
Q41385	3.3e-91	77.17	Photosystem I reaction center subunit XI, chloroplastic OS=Spinacia oleracea OX=...	[more]
P23993	4.4e-80	70.64	Photosystem I reaction center subunit XI, chloroplastic OS=Hordeum vulgare OX=45...	[more]
Q6B8P4	1.4e-33	50.68	Photosystem I reaction center subunit XI OS=Gracilaria tenuistipitata var. liui ...	[more]

BLAST of Moc08g38950 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D7U0	7.5e-115	100.00	PSI subunit V OS=Momordica charantia OX=3673 GN=LOC111018169 PE=3 SV=1	[more]
A0A6J1HKH3	3.2e-113	98.16	PSI subunit V OS=Cucurbita maxima OX=3661 GN=LOC111465381 PE=3 SV=1	[more]
A0A1S3B555	9.2e-113	97.70	PSI subunit V OS=Cucumis melo OX=3656 GN=LOC103485887 PE=3 SV=1	[more]
A0A0A0LHJ8	3.5e-112	96.77	PSI subunit V OS=Cucumis sativus OX=3659 GN=Csa_2G074240 PE=3 SV=1	[more]
A0A6J1FBZ4	3.5e-112	96.77	PSI subunit V OS=Cucurbita moschata OX=3662 GN=LOC111444030 PE=3 SV=1	[more]

BLAST of Moc08g38950 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G12800.1	4.2e-94	78.54	photosystem I subunit l	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003757	Photosystem I PsaL, reaction centre subunit XI	PFAM	PF02605	PsaL	coord: 112..264 e-value: 4.0E-58 score: 195.3
IPR036592	Photosystem I PsaL, reaction centre subunit XI superfamily	GENE3D	1.20.1240.10	Photosystem I PsaL, reaction centre subunit XI	coord: 107..270 e-value: 1.7E-72 score: 244.1
IPR036592	Photosystem I PsaL, reaction centre subunit XI superfamily	SUPERFAMILY	81568	Photosystem I reaction center subunit XI, PsaL	coord: 113..269
IPR022980	Photosystem I, reaction centre subunit XI	PANTHER	PTHR34803	FAMILY NOT NAMED	coord: 54..270

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc08g38950.1	Moc08g38950.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009538	photosystem I reaction center
cellular_component	GO:0009522	photosystem I