Moc08g38190 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc08g38190
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Locationchr8: 28512271 .. 28512471 (+)
RNA-Seq ExpressionMoc08g38190
SyntenyMoc08g38190
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATGATTCCGTGGAAGAAAACTCTGGAGTTACAGCAAATCAGAGTACACAAGTTGTGAATCCTGGAAGTAAAATCACCACCGTCAAACTGGGTGATGATAATTTCCTACTAGGAAAATTCCAAATCCTAGCTGCTCTTGAAGGAAATGGCTTGGAAGCCATATCAGTGAAGAAAGTGAAGCACCGCCACAATTCTTGA

mRNA sequence

ATGAATGATTCCGTGGAAGAAAACTCTGGAGTTACAGCAAATCAGAGTACACAAGTTGTGAATCCTGGAAGTAAAATCACCACCGTCAAACTGGGTGATGATAATTTCCTACTAGGAAAATTCCAAATCCTAGCTGCTCTTGAAGGAAATGGCTTGGAAGCCATATCAGTGAAGAAAGTGAAGCACCGCCACAATTCTTGA

Coding sequence (CDS)

ATGAATGATTCCGTGGAAGAAAACTCTGGAGTTACAGCAAATCAGAGTACACAAGTTGTGAATCCTGGAAGTAAAATCACCACCGTCAAACTGGGTGATGATAATTTCCTACTAGGAAAATTCCAAATCCTAGCTGCTCTTGAAGGAAATGGCTTGGAAGCCATATCAGTGAAGAAAGTGAAGCACCGCCACAATTCTTGA

Protein sequence

MNDSVEENSGVTANQSTQVVNPGSKITTVKLGDDNFLLGKFQILAALEGNGLEAISVKKVKHRHNS
Homology
BLAST of Moc08g38190 vs. NCBI nr
Match: XP_022148749.1 (uncharacterized protein LOC111017341 isoform X1 [Momordica charantia])

HSP 1 Score: 60.5 bits (145), Expect = 6.5e-06
Identity = 27/48 (56.25%), Postives = 39/48 (81.25%), Query Frame = 0

Query: 7  ENSGVTANQSTQVVNPGSKITTVKLGDDNFLLGKFQILAALEGNGLEA 55
          +++G    Q++Q +NPG+KI+TVKL D+NFLL KFQ+L  LEG+GLE+
Sbjct: 10 DSTGTNGVQASQYINPGNKISTVKLTDENFLLWKFQVLTTLEGHGLES 57

BLAST of Moc08g38190 vs. NCBI nr
Match: XP_022148750.1 (uncharacterized protein LOC111017341 isoform X2 [Momordica charantia])

HSP 1 Score: 60.5 bits (145), Expect = 6.5e-06
Identity = 27/48 (56.25%), Postives = 39/48 (81.25%), Query Frame = 0

Query: 7  ENSGVTANQSTQVVNPGSKITTVKLGDDNFLLGKFQILAALEGNGLEA 55
          +++G    Q++Q +NPG+KI+TVKL D+NFLL KFQ+L  LEG+GLE+
Sbjct: 10 DSTGTNGVQASQYINPGNKISTVKLTDENFLLWKFQVLTTLEGHGLES 57

BLAST of Moc08g38190 vs. NCBI nr
Match: XP_022159146.1 (uncharacterized protein LOC111025572 [Momordica charantia])

HSP 1 Score: 55.5 bits (132), Expect = 2.1e-04
Identity = 25/49 (51.02%), Postives = 35/49 (71.43%), Query Frame = 0

Query: 4  SVEENSGVTANQSTQVVNPGSKITTVKLGDDNFLLGKFQILAALEGNGL 53
          S  E      NQ++ +VNPG+KI+T+KL D+NFLL + QI  AL+G+GL
Sbjct: 4  SSSETDSTVVNQNSTIVNPGNKISTIKLNDENFLLWRLQITTALQGHGL 52

BLAST of Moc08g38190 vs. NCBI nr
Match: XP_022154487.1 (uncharacterized protein LOC111021757 [Momordica charantia])

HSP 1 Score: 54.7 bits (130), Expect = 3.5e-04
Identity = 25/51 (49.02%), Postives = 36/51 (70.59%), Query Frame = 0

Query: 4  SVEENSGVTANQSTQVVNPGSKITTVKLGDDNFLLGKFQILAALEGNGLEA 55
          S+  +      Q+++ +NPGSK++ V+L DDN LL KFQI  AL+GNGLE+
Sbjct: 6  SIRNSDAARIIQASKTINPGSKVSIVRLNDDNXLLWKFQIRTALQGNGLES 56

BLAST of Moc08g38190 vs. ExPASy TrEMBL
Match: A0A6J1D3S9 (uncharacterized protein LOC111017341 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111017341 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 3.1e-06
Identity = 27/48 (56.25%), Postives = 39/48 (81.25%), Query Frame = 0

Query: 7  ENSGVTANQSTQVVNPGSKITTVKLGDDNFLLGKFQILAALEGNGLEA 55
          +++G    Q++Q +NPG+KI+TVKL D+NFLL KFQ+L  LEG+GLE+
Sbjct: 10 DSTGTNGVQASQYINPGNKISTVKLTDENFLLWKFQVLTTLEGHGLES 57

BLAST of Moc08g38190 vs. ExPASy TrEMBL
Match: A0A6J1D4X2 (uncharacterized protein LOC111017341 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111017341 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 3.1e-06
Identity = 27/48 (56.25%), Postives = 39/48 (81.25%), Query Frame = 0

Query: 7  ENSGVTANQSTQVVNPGSKITTVKLGDDNFLLGKFQILAALEGNGLEA 55
          +++G    Q++Q +NPG+KI+TVKL D+NFLL KFQ+L  LEG+GLE+
Sbjct: 10 DSTGTNGVQASQYINPGNKISTVKLTDENFLLWKFQVLTTLEGHGLES 57

BLAST of Moc08g38190 vs. ExPASy TrEMBL
Match: A0A6J1E314 (uncharacterized protein LOC111025572 OS=Momordica charantia OX=3673 GN=LOC111025572 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.0e-04
Identity = 25/49 (51.02%), Postives = 35/49 (71.43%), Query Frame = 0

Query: 4  SVEENSGVTANQSTQVVNPGSKITTVKLGDDNFLLGKFQILAALEGNGL 53
          S  E      NQ++ +VNPG+KI+T+KL D+NFLL + QI  AL+G+GL
Sbjct: 4  SSSETDSTVVNQNSTIVNPGNKISTIKLNDENFLLWRLQITTALQGHGL 52

BLAST of Moc08g38190 vs. ExPASy TrEMBL
Match: A0A6J1DLT9 (uncharacterized protein LOC111021757 OS=Momordica charantia OX=3673 GN=LOC111021757 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.7e-04
Identity = 25/51 (49.02%), Postives = 36/51 (70.59%), Query Frame = 0

Query: 4  SVEENSGVTANQSTQVVNPGSKITTVKLGDDNFLLGKFQILAALEGNGLEA 55
          S+  +      Q+++ +NPGSK++ V+L DDN LL KFQI  AL+GNGLE+
Sbjct: 6  SIRNSDAARIIQASKTINPGSKVSIVRLNDDNXLLWKFQIRTALQGNGLES 56

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022148749.16.5e-0656.25uncharacterized protein LOC111017341 isoform X1 [Momordica charantia][more]
XP_022148750.16.5e-0656.25uncharacterized protein LOC111017341 isoform X2 [Momordica charantia][more]
XP_022159146.12.1e-0451.02uncharacterized protein LOC111025572 [Momordica charantia][more]
XP_022154487.13.5e-0449.02uncharacterized protein LOC111021757 [Momordica charantia][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1D3S93.1e-0656.25uncharacterized protein LOC111017341 isoform X2 OS=Momordica charantia OX=3673 G... [more]
A0A6J1D4X23.1e-0656.25uncharacterized protein LOC111017341 isoform X1 OS=Momordica charantia OX=3673 G... [more]
A0A6J1E3141.0e-0451.02uncharacterized protein LOC111025572 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A6J1DLT91.7e-0449.02uncharacterized protein LOC111021757 OS=Momordica charantia OX=3673 GN=LOC111021... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc08g38190.1Moc08g38190.1mRNA