Moc08g36930 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc08g36930
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Locationchr8: 27491118 .. 27491528 (-)
RNA-Seq ExpressionMoc08g36930
SyntenyMoc08g36930
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGATCACACCCACACATTCTTCAATTCAACCCCAATTCCATGGGACATTCTTCCAACAGTACTACAGGAGTTGCAATGGCGCTCCTCATTTTGGCGCTGACTCTGTGTGCCAACAACTGCAACTGCAATGCTGCTCCTCTAAGTCCTTCCAATTTCGACAACGACACGCTCGTCATCGCTGCCTCGATGCGGTGCGATGGCCACACCGAAGAATGCATCGCCGAAGAAGACAACGAGTCGGCATTTCCAAACTTGGTAAAGTCGATTAAGTTATTTGATAGTTCAAGAACCGGAAACCAGAACAAACCTATATGTTCTCGGCCGGGAAGTTCTAGATGCCTCGACGACGGACACCCAATTCCCAATCCAGAAACTTGTGCTGATTATAAGCGCAACTTCTGTCATTAG

mRNA sequence

ATGAGATCACACCCACACATTCTTCAATTCAACCCCAATTCCATGGGACATTCTTCCAACAGTACTACAGGAGTTGCAATGGCGCTCCTCATTTTGGCGCTGACTCTGTGTGCCAACAACTGCAACTGCAATGCTGCTCCTCTAAGTCCTTCCAATTTCGACAACGACACGCTCGTCATCGCTGCCTCGATGCGGTGCGATGGCCACACCGAAGAATGCATCGCCGAAGAAGACAACGAGTCGGCATTTCCAAACTTGGTAAAGTCGATTAAGTTATTTGATAGTTCAAGAACCGGAAACCAGAACAAACCTATATGTTCTCGGCCGGGAAGTTCTAGATGCCTCGACGACGGACACCCAATTCCCAATCCAGAAACTTGTGCTGATTATAAGCGCAACTTCTGTCATTAG

Coding sequence (CDS)

ATGAGATCACACCCACACATTCTTCAATTCAACCCCAATTCCATGGGACATTCTTCCAACAGTACTACAGGAGTTGCAATGGCGCTCCTCATTTTGGCGCTGACTCTGTGTGCCAACAACTGCAACTGCAATGCTGCTCCTCTAAGTCCTTCCAATTTCGACAACGACACGCTCGTCATCGCTGCCTCGATGCGGTGCGATGGCCACACCGAAGAATGCATCGCCGAAGAAGACAACGAGTCGGCATTTCCAAACTTGGTAAAGTCGATTAAGTTATTTGATAGTTCAAGAACCGGAAACCAGAACAAACCTATATGTTCTCGGCCGGGAAGTTCTAGATGCCTCGACGACGGACACCCAATTCCCAATCCAGAAACTTGTGCTGATTATAAGCGCAACTTCTGTCATTAG

Protein sequence

MRSHPHILQFNPNSMGHSSNSTTGVAMALLILALTLCANNCNCNAAPLSPSNFDNDTLVIAASMRCDGHTEECIAEEDNESAFPNLVKSIKLFDSSRTGNQNKPICSRPGSSRCLDDGHPIPNPETCADYKRNFCH
Homology
[Close]
BLAST of Moc08g36930 vs. NCBI nr
Match: KAG6607071.1 (hypothetical protein SDJN03_00413, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 89.7 bits (221), Expect = 2.0e-14
Identity = 51/120 (42.50%), Postives = 67/120 (55.83%), Query Frame = 0 

Query: 15  MGHSSNSTTGVAMALLILALTLCANNCNCNAAPLSPSNFDNDTLVIAASMRCDGHTEECI 74
           MGHSSNS  GV  A  +    L  +  +CN A  +PS++ N+T+  AASM CDG  EEC+
Sbjct: 1   MGHSSNS-GGVMAAAAMGVFILVLSGSDCNVASPTPSSYGNNTVAAAASMWCDGRVEECV 60

Query: 75  AEE-DNESAFPNLVKSIKLFDSSRTGNQNKPICSRPGSSR-CLDDGHPIPNPETCADYKR 133
             E D+ SAFP+L  S + + S  + N NK +C RP   R C +     PNP  C  Y R
Sbjct: 61  TREGDSASAFPSLQTSTRKYISPSSVNSNKAVCERPDEYRSCFNPRRSNPNPNNCGRYTR 119

[Close]
BLAST of Moc08g36930 vs. NCBI nr
Match: KAG6607070.1 (hypothetical protein SDJN03_00412, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 85.9 bits (211), Expect = 3.0e-13
Identity = 50/122 (40.98%), Postives = 67/122 (54.92%), Query Frame = 0 

Query: 15  MGHSSNS--TTGVAMALLILALTLCANNCNCNAAPLSPSNFDNDTLVIAASMRCDGHTEE 74
           MGHSSNS      A A  +    L  +  +C+ A  +PS++ N T+  AASM CDG  EE
Sbjct: 1   MGHSSNSGAVMAAAAAAAMGVFILMLSGSHCSVASPTPSSYGNITVAAAASMWCDGRVEE 60

Query: 75  CIA-EEDNESAFPNLVKSIKLFDSSRTGNQNKPICSRPGSSR-CLDDGHPIPNPETCADY 133
           C+  E+D ESAFP+L+ S   F S  T N+NKP+C RPG  + C +        + C  Y
Sbjct: 61  CVTREDDGESAFPSLLASTPKFISFPTRNRNKPVCERPGDYKSCFNARRTNTKNDNCGTY 120

The following BLAST results are available for this feature:
BLAST of Moc08g36930 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6607071.12.0e-1442.50hypothetical protein SDJN03_00413, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6607070.13.0e-1340.98hypothetical protein SDJN03_00412, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Moc08g36930 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc08g36930 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc08g36930 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc08g36930.1Moc08g36930.1mRNA