Moc08g36300 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc08g36300
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	THO complex subunit 4D-like
Location	chr8: 26908879 .. 26915781 (-)
RNA-Seq Expression	Moc08g36300
Synteny	Moc08g36300

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTACGCCTCTGGATATGTCACTAGAGGACATGATAAAGAAGAATAACCGTGAGAAGCTTAGAGCACGAGGTAGGGCCCGTCGTGGGCGTGGAGCAGGTGGGTCTTTTAATGGTGGAAGAGTAGTGATAGGGTCGATTCGTAGAGGCCCTCTCAGCATAAATACACGGCCATCTGCTTTCTCAATTAGCAAGGCAAGCTTCAAACTGTTGATGTTTAATGCATATGCTTGAGAACCTGATATTCCTTGAAAATACATGCTTATGGGGATCTCAAATAACATTATAGTAACTCTAACAGAAGAGGCTCAGTAAAATTGTTGTTCTATGGAGAATCTCATTGTGGCTCACCCTCTTATCCGTATCGCCATCTGGTGTATTTGTACCATTATCTTTGCAAATGTTGAATACGTGTGGGTTATCTGGGTTATTTTCAAGGGACTGTCAAGAGTGGAGAATTATATTCTTGTCGATTTATAAGCTGATATGTGTTTTCCCCATCTGGATTCTTATCTGCATACTTTCATCAGCCCCCACGCAGAATGAAGAATGTTCAATGGCAGCATGATTTATTCGAAGACAGTCTTAGAGCTTCAGGGATTTCTGGAATTGAAATTGGCACAAAGTTGTACGTTTCCAACTTGGATTATGGGGTGACCAAAGAAGATATAAGGGTACAACTTAAGCCATCTGTATTTGACTAAAGATGCTTTCTCTTCATTTTTTGATTAACATTCTCTTGGAACCTGACGGTGAACTCAGGAGTTGTTCTCTGAGATTGGAGACCTGAAAAGATTTGCAATTCATTATGACAAAAATGGCCGTCCAAGTGTAAGTTCCTACACTATCTTTTTGTAAAAATTTGTAGTAATATGTTGCTGTCTGGTTTTTTAGTTTTTCTGGAATCAAGTATCAATGTTATTTTTGTAGTATAGACTCTTGTCTCTCAGAAGTCAGAACTGTGTGACCATTGAATGAATATTTGCTTTTGGTGGATTTAGATTTATCCATATGCAATATTGATTTTTTACTTCAAAAGATAGATAGCCCTAGAAAAAACAATTACTAGGACTTTGCTACTAGAATACGTGTTATGAATGCAAAAGCCTTGACTACTTTTGCCAACAAACAGTACACAATGAAACATGATCTTAACAAACTTTAAATCATATTATTTAAGCTTGCTCCTTTATAGACATTGCCCAATAGGATGCGGAAGCTTCATATGTGTATAAAGTTTGCAATCTTTACTAGTGATACCACAAAATGAGACTAGTTGGAGACAAAGGCTGAGTAAGATTGAAAGAGACACTGTTTTTCTTCTCTTTATCCATCCCTTCAAGTTTCTGAACGTTTTTTTGGAAGGGCTTGATTGACACCACCCTCTGAGTTGGAGATGCCTTTTATGCCCCTTTATCTCTAGAAAAGACAAATAAAGGTGGTCATGTTTAGATTTGTTTGTAATAAGCCTCTGGGTTCGAATGGTTTCTCTATGGCTTTTGTTCTTCTTTGGATAAATTGGGATGTGTCAAAGGTGATAACCTTACGGTTTATTAGTTTTGTGTGAAGGGTGGAGTCATACACTTGCATTATCTTCAAGAAGTCCTCTACTGGAGCATAAGGGACGCCTTAAAAATAATAGCGAAGATTTTAGTTGAATTTGTTAGTGTTGATTGAGAGAAAAACAACCATAAAGAACAAAAAAAATGAATATAGGAAGAAAATGTAGAATTTTTTTTTGTCTTATGAACGCAAGGTTTTTTATTTTTGTCTACTGCCTTGACACAAACATATTCTTGAGCGTGAATATGATGTAGTTTCTATGCTAATCATAGAAAAATCAGCACAACTCAACTAAAAGTTTGCTAGTTCAGTGTCATTCTATAAGTTTGCTAGTTGAGTTGTGCTTATTTCTAATTCTTGCTCTTCTTGCTTGTCATTGTATTCATATTAGGGGTGAACATCAGTTGGAAAGTGTTGGTTTTGGCCGAAAATCTATCATTCTGTTTTGGTTGGTTGAAAACTAGAAATATTTTAAGCTTTATACTGACTGAATGTTTATATCGGTTCAGTTGGTTGGTCTTTGGTGAACATTAGAGGAAGAGATGCTCTGCTGTGGTGTGGCCACACAGCAAGGATTGAGATGGGAGGTGGAGAAGAGAGGGGAAAGGGAGTGAGAAAAATGGAAGACGAAATGAGGGAGGGGAGGGAGGGGTGGAAGGGAAAGAAAAAAGAGAGGGAAGGGGGGAGAGAAATCAGAGAGAAGGGGTCATGGGATGGGAGGATAAAAGAGGGAGGGAGAGAAAGAAATAAAGGAGAGAGAGGGAGGGAGAGGGGGACACGTGAAATGGTGAGAGGATTTTTTTATTAATTAATCAATTGGTTGGTTAGAATGGCACTTTTTGGCCACTCGCACTGACTGATGAGTCGGTTTTTTACTACCAACTTTGATTGAATGTAGGTTTTAACCAACCGACATTGGTTTGGTCTGTTTTCAGATTTCCTTGTTCACCCCTAATTCATATTTAGTTTCTTTTAAGTTGACATGAGATGTATCCGCTCATATGATAATTGTTGCGCTTGTGCTTTAAATGTGTTCTTAATTGGATCATGGTTGGTTCTCTTATCAAGCTTTAGTTGGCTGATAAACTTTCCGTTGTTCATTAAAGGGCTCGGCAGAGGTGGTATATACTCGTAGGAGTGATGCATTTGCTGCTTTGAAGCGCTATAACAATGTGTTATTGGATGGGAAGCCCATGAAGATTGAAATTCTTGGCGATAATGCTGAAATGCCAGTTTCTGCACGTATAAACGTCACTGGACTGAATGGGAGAAGCAGGAGGACAGTTGTTCTAACGTATGTAGTATTCTAGTTACTTTTCCCCTCTTCCTTTTTTGTTCCTTTTTTCCTATTTATTTATTTTTCATTTTATAACTAATTATTGTGCCCCTGGGAGGTAGAAAGTTACTGGATTTTTGTTATATTTCTGTCATTTTTATCTTGCTACTTTCAAGTTGCTTTTTGTTCGTCAAGTGGAAACTATCATCATCTGCCTCATTTCCAAAGGTGACATGACTGGGATTTCAGGCCAATTAGTCAGATAATAGGGTTTGTAAAAATTTTTGGAAGGTGCTTGTAGATTGGCTGAAGAAGGTTTCTTCCTTCAACGATCTCTCCAGATCTGGTTCCATTGAACGTTGATAAATTTGGTTGTAGGTTGGCAGGCAAACAATTCCACTCTTATTACATTACCAATGAATAGCTGGTGAGTTGATAAGGAGCAAGACTCAATGGTAGATCTTAAGTTAGACATCGAAAAGGCCTATGAATTAGTTGATTAGGACTTTCATACAAAGACTTTGAGCATAAAGGTTCTGAGCCAAATGTGTTAGGTGGATGCTTATTTGTTTCACTTACACCAGATTTTTCCATTTTTATCGATGGAAGACGACCTCCCTTGGGATAGGTTAAAGCTTCAAGGTTATTCAATGAGGTGTTTCTCTCTTCGTGTAGAATTAGATTATTGGGAGCAAATATGGAGTTCATTCCAATGACTGGAATGCACGCTTCAAAAGTCCTTGGAAGGTGAACTCCCTCTATCTTTTTAGTTTTCTCCCCTTCTCTGCAGGGGATGGTCGTAGAGTTTGGTTCTATAGGATCATTGGATCCATAAAAAATTAGGATCATTGGGTCCATGTGTTGCAATTCCCTTATATTTACGTAGTGGCCCTCAAAATATTCTGGTTGCTTATGTTATTTGCTCGCAGAGAGGGCTTTTTTTTGCAGGGCCCTTCAAGATCTTGAGATTTAGGAGCCTATTTCATCAAAAACCATTAATTACATAGAACCAACTGAACACACAGAAACACAAAATGTTCCCAAGTTCATAACCATGAGAAGCCTATTACTCAAAGATCTCTAATAGCAATCTACTTGGTTGGTTACTTTTGAGTAGTTAAACTATTTTGTTTGGATCAATCTGTCATTTGGTCTATTCAAAATCCACGAATTATATTGTAATAAAATTTTGGATAAGTTTTACTGTAGTTCCAATAGATGCAGTCTGCTATGTTAGTCTTTTTTATGTTAATTTTAATAGTTTCTGTGATGTTGAGCCACATGTATGTGATTGCTTCCCTGGATGTGAATGTAGTGGCCAAATCATTTCTCTTCTCTCTTATCCTTTCTATCCATTTTCTCTGGCCAACCTCCGGTGATTCTTTTCCAAAGGAGAAGAAAATAGTACCCATCTTGAAGTGGCGGAGGATTTCTGCCTCAATGCTAAATCAACCCCTTACCTTCTTGCAAAGAGGCATGTGGAAAGAAATGGAGGGGGGGGGGGGGTCATTTCATTTTTTTTATCGAGAACGAACCGGTTTAAGAGATGAGAGAATTAGGGATACAGTGTTTATTAGAGACAAAAATAGTAATTAATATGATCTCTACCTGCTAACTCTTTAGGTCTGATGGGTTGGTTATGTCATTTTAATGTTCAATGTATTGGGGGGGGGGAGTTAGAAAGAATTAGAGGAGGGTCATTTCATTTTTGTATCGAGAACAAACAGGTGTATATGGATGTGTCTGTGCATGGGAGTACGTGTCTCACAATTTCGAAAGAATTAGAGAGGGTCATTTCATTTTTGTATCAAGAATGAACAACTCTAAAAGATGAGAGAATTAAGGATATAGTGTTTATTAGAGACAAAAATAGTAACTAATATGATCTCTACCTGCTAGTGCTAACTTTTCGAGTTTGATGGGTTGGTTATGTCATTTTAATATTCAATGTATTGAAAGGGGGAGGAATCTTTTGGATTCAACTTGTTAGGGCTTTTCTTTGGAGCGTTTGGTTGGAGAGGAACAACAGGATCTTCAATGCCACATCTCTCTCAATTGATTTTTTTTTAATCTTTTATTATTTTTTTTTGTAGAGTTATTGTGTTACCTCTTGGTGGGTGTAAATGCTTCTATTCCTCCTTCAATAGCTACAATCTAAATGATCTTGCCTCTAATTAGAAGGCGTTTTTGTATCCAGCCTTCGTGGCTTTTTGTATATTTTATACTATCTATGAAATACATGTTTCTTACAAAAAAAAAAGTATTGAAAGATATGTAATAAACACCTTTTTCATCAAAATGGTATTTCCAGTTCCATTGTAAGCTTTCTAAAAGCCCACTCCAAATCAAACGGTACTAGAAGCATAAATTCTGCTAGCACTGTCCTAAACTAGCATTTGCAGAGTGCAGTCAAGTTACTTCTTAAAATGTGGCTATATTGTCAAAATTCGTTTTTATGCAGATGGGCCTTTGTAGAATTTTATACAAATAGTTTGCTAATGGTTTCTTATCTCATGGACTGATACAGACGTTCCCTTGTCCTTGGCTGTAGTGTTGGAATCTGTCCCCCCTTTCTTTTTACGTACTTTGAAATTAAATTGTTTCTTAAAATGATTAATGAAAACGAAACAAATCCGCTACAGATGCTGATTGATATTTGGGTATGTGCAGGTCTGAATCTGGTCGTACCGATAGCTCTACCGTGGTCAACCATTTTCCTGGGTAAGTTCTAACTGGTGACAAATTTTTTTACAAGAAAGTTTTTATATTTTAATAGTGGATTGGAGCACGTGGGTTTTATTATTATTATTATAACTATTATGTTTTGGCATTGTTTGACTGTGGGAGTTGGATAGGGTTTTAGGACATTTTTTGTTATTATTTTTATACTTCCGACTTTCTTAGGGATATTACAATTGAGATGTTTTCTAAATTAACTGTTTGTTTATGATCATGAATGATTTTTAAGTATGGCTTAAATTAAATGCATTATGTTTAAAAATTAATATTTAGAAGACAAATGAAAATAAAAGAACAAAAAATATTTTCCTTGTAGTTTTAATAATTTGAAATAATAGTAAACAGTTTTAAAATATCATTTTTTACAATTTAAAATAACAAGAAACAGTTTTCAAAACAATTTATAAAAGGCAGAATAAGCTGTGTTTTTCAACCTTTTCTAGGTGTGATCACAAATGTGATTTGCTTCGTAGTTTTTAACAAGCTAATGTTTAAGGGAGTGAGAGGAAAAAAGAAATGTGGGGGCAGAGGAGGTTAAAGAAAGTAGTCACTGTAGGACATTTGAGATCCTAGAAATTTGACGTATTTAAGGCATCATTCTTAATTGTGATACCGTTTGCGTGAGCAAGACATCTCTACTCTCTGTCAAGGGTGGTAGGTTCGAGTCCTTTTTCGGTATTTATGAAGTAATATTCTAAAGGAAAAAAAGAGTCCCAATTCTGTATTTGTGAAGTAATATTCTAAAGGAAAGAAAAGAAGATAGTATGTATGTGTAAGGCCCCCAGTAGTAAATACGTATGCAAGGAGGGACAAAGAAGGGAATTCGCCACCTTCAAGTTAGTTAGTTTTAGTTTATATGCTTTTGGGATCCTTTGTAATGTTTTCATGCTTTGTTTGGGAAAGTCTTGGTTGGGAGAACACCAGTCCTCTCTAAGTGGCTGGGGAGACCTTTTGTAAAGCCCTAGGGCTCTTGTTTCCTGGGAATATCAGTATTTTGTATTGGGTTTCTTATAGTATGGTGATCTTTGACTAAAGTCTATGTAGTTGAGATCAACTAATGGAGTTGGTAGATCGACTTTTTTCCGTAGCTGTTTGGTTTTTATTAAAGTTTTTGGATTTTGTATAGTCCAAGCAATCGTGGAGCGCTGAGGGGCCGTGGCCGTGGGCGAGGGGGCTGGAGCCGTGGTCAGGGTCAAGTTGGAGGTGGCCGAGGTCGAGGACGTGGTCGTGGGCGTGGCCTGGGGAGGAAGAAAACCGTGGAGAAGTCCTCAGATGAACTCGACAAGGATCTCGAAAATTATCATGCAGAAGCCATGCAAACCTGA

mRNA sequence

ATGGCTACGCCTCTGGATATGTCACTAGAGGACATGATAAAGAAGAATAACCGTGAGAAGCTTAGAGCACGAGGTAGGGCCCGTCGTGGGCGTGGAGCAGGTGGGTCTTTTAATGGTGGAAGAGTAGTGATAGGGTCGATTCGTAGAGGCCCTCTCAGCATAAATACACGGCCATCTGCTTTCTCAATTAGCAAGCCCCCACGCAGAATGAAGAATGTTCAATGGCAGCATGATTTATTCGAAGACAGTCTTAGAGCTTCAGGGATTTCTGGAATTGAAATTGGCACAAAGTTGTACGTTTCCAACTTGGATTATGGGGTGACCAAAGAAGATATAAGGGAGTTGTTCTCTGAGATTGGAGACCTGAAAAGATTTGCAATTCATTATGACAAAAATGGCCGTCCAAGTGGCTCGGCAGAGGTGGTATATACTCGTAGGAGTGATGCATTTGCTGCTTTGAAGCGCTATAACAATGTGTTATTGGATGGGAAGCCCATGAAGATTGAAATTCTTGGCGATAATGCTGAAATGCCAGTTTCTGCACGTATAAACGTCACTGGACTGAATGGGAGAAGCAGGAGGACAGTTGTTCTAACGTCTGAATCTGGTCGTACCGATAGCTCTACCGTGGTCAACCATTTTCCTGGTCCAAGCAATCGTGGAGCGCTGAGGGGCCGTGGCCGTGGGCGAGGGGGCTGGAGCCGTGGTCAGGGTCAAGTTGGAGGTGGCCGAGGTCGAGGACGTGGTCGTGGGCGTGGCCTGGGGAGGAAGAAAACCGTGGAGAAGTCCTCAGATGAACTCGACAAGGATCTCGAAAATTATCATGCAGAAGCCATGCAAACCTGA

Coding sequence (CDS)

ATGGCTACGCCTCTGGATATGTCACTAGAGGACATGATAAAGAAGAATAACCGTGAGAAGCTTAGAGCACGAGGTAGGGCCCGTCGTGGGCGTGGAGCAGGTGGGTCTTTTAATGGTGGAAGAGTAGTGATAGGGTCGATTCGTAGAGGCCCTCTCAGCATAAATACACGGCCATCTGCTTTCTCAATTAGCAAGCCCCCACGCAGAATGAAGAATGTTCAATGGCAGCATGATTTATTCGAAGACAGTCTTAGAGCTTCAGGGATTTCTGGAATTGAAATTGGCACAAAGTTGTACGTTTCCAACTTGGATTATGGGGTGACCAAAGAAGATATAAGGGAGTTGTTCTCTGAGATTGGAGACCTGAAAAGATTTGCAATTCATTATGACAAAAATGGCCGTCCAAGTGGCTCGGCAGAGGTGGTATATACTCGTAGGAGTGATGCATTTGCTGCTTTGAAGCGCTATAACAATGTGTTATTGGATGGGAAGCCCATGAAGATTGAAATTCTTGGCGATAATGCTGAAATGCCAGTTTCTGCACGTATAAACGTCACTGGACTGAATGGGAGAAGCAGGAGGACAGTTGTTCTAACGTCTGAATCTGGTCGTACCGATAGCTCTACCGTGGTCAACCATTTTCCTGGTCCAAGCAATCGTGGAGCGCTGAGGGGCCGTGGCCGTGGGCGAGGGGGCTGGAGCCGTGGTCAGGGTCAAGTTGGAGGTGGCCGAGGTCGAGGACGTGGTCGTGGGCGTGGCCTGGGGAGGAAGAAAACCGTGGAGAAGTCCTCAGATGAACTCGACAAGGATCTCGAAAATTATCATGCAGAAGCCATGCAAACCTGA

Protein sequence

MATPLDMSLEDMIKKNNREKLRARGRARRGRGAGGSFNGGRVVIGSIRRGPLSINTRPSAFSISKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVTKEDIRELFSEIGDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEILGDNAEMPVSARINVTGLNGRSRRTVVLTSESGRTDSSTVVNHFPGPSNRGALRGRGRGRGGWSRGQGQVGGGRGRGRGRGRGLGRKKTVEKSSDELDKDLENYHAEAMQT

Homology

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BLAST of Moc08g36300 vs. NCBI nr
Match: XP_022143379.1 (THO complex subunit 4D-like [Momordica charantia])

HSP 1 Score: 540.0 bits (1390), Expect = 1.2e-149
Identity = 281/281 (100.00%), Postives = 281/281 (100.00%), Query Frame = 0


Query: 1   MATPLDMSLEDMIKKNNREKLRARGRARRGRGAGGSFNGGRVVIGSIRRGPLSINTRPSA 60
           MATPLDMSLEDMIKKNNREKLRARGRARRGRGAGGSFNGGRVVIGSIRRGPLSINTRPSA
Sbjct: 1   MATPLDMSLEDMIKKNNREKLRARGRARRGRGAGGSFNGGRVVIGSIRRGPLSINTRPSA 60

Query: 61  FSISKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVTKEDIRELFSEIG 120
           FSISKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVTKEDIRELFSEIG
Sbjct: 61  FSISKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVTKEDIRELFSEIG 120

Query: 121 DLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEILGDNAEMPVS 180
           DLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEILGDNAEMPVS
Sbjct: 121 DLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEILGDNAEMPVS 180

Query: 181 ARINVTGLNGRSRRTVVLTSESGRTDSSTVVNHFPGPSNRGALRGRGRGRGGWSRGQGQV 240
           ARINVTGLNGRSRRTVVLTSESGRTDSSTVVNHFPGPSNRGALRGRGRGRGGWSRGQGQV
Sbjct: 181 ARINVTGLNGRSRRTVVLTSESGRTDSSTVVNHFPGPSNRGALRGRGRGRGGWSRGQGQV 240

Query: 241 GGGRGRGRGRGRGLGRKKTVEKSSDELDKDLENYHAEAMQT 282
           GGGRGRGRGRGRGLGRKKTVEKSSDELDKDLENYHAEAMQT
Sbjct: 241 GGGRGRGRGRGRGLGRKKTVEKSSDELDKDLENYHAEAMQT 281

[Close]

BLAST of Moc08g36300 vs. NCBI nr
Match: XP_038896761.1 (THO complex subunit 4D-like [Benincasa hispida])

HSP 1 Score: 479.9 bits (1234), Expect = 1.5e-131
Identity = 256/285 (89.82%), Postives = 268/285 (94.04%), Query Frame = 0


Query: 1   MATPLDMSLEDMIKKNNREKLRARGRARRGRGAGGSFNGGR-VVIGSIRRGPLSINTRPS 60
           MATPLDMSLED+IKK+NREKLRARGRARRGRGAGGSFNGGR VV+GS+RRGPL IN R S
Sbjct: 1   MATPLDMSLEDVIKKSNREKLRARGRARRGRGAGGSFNGGRGVVVGSVRRGPLGINARAS 60

Query: 61  AFSISKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVTKEDIRELFSEI 120
           A+SI KPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGV+KEDIRELFSEI
Sbjct: 61  AYSIRKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVSKEDIRELFSEI 120

Query: 121 GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEILGDNAEMPV 180
           GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDG+PMKIE+LGDNAEMPV
Sbjct: 121 GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGRPMKIEMLGDNAEMPV 180

Query: 181 SARINVTGLNGRSRRTVVLTSESGRTDSSTVVNHFPGPSNRGALR-GRGRGRGGWSRGQ- 240
           SARINVTG+NGRSRRTVVLT ESGRT SS VVN FPGPS+RG LR GRGRGRGGW+RGQ 
Sbjct: 181 SARINVTGVNGRSRRTVVLTPESGRTASSNVVNPFPGPSHRGGLRNGRGRGRGGWNRGQG 240

Query: 241 -GQVGGGRGRGRGRGRGLGRKKTVEKSSDELDKDLENYHAEAMQT 282
            G  GGGRGRGRGRGRG GRKK VEKSSDELDK+LENYHAEAMQT
Sbjct: 241 VGGGGGGRGRGRGRGRGQGRKKPVEKSSDELDKELENYHAEAMQT 285

[Close]

BLAST of Moc08g36300 vs. NCBI nr
Match: XP_023527122.1 (THO complex subunit 4D [Cucurbita pepo subsp. pepo])

HSP 1 Score: 475.7 bits (1223), Expect = 2.7e-130
Identity = 259/295 (87.80%), Postives = 268/295 (90.85%), Query Frame = 0


Query: 1   MATPLDMSLEDMIKKNNREKLRARGRARRGRGAGGSFNGGR-VVIGSIRRGPLSINTRPS 60
           MATPLDMSLED+IKKNNREKLRARGRARRGRGAGGS+NGGR VVIGS+RRGPL IN RPS
Sbjct: 1   MATPLDMSLEDVIKKNNREKLRARGRARRGRGAGGSYNGGRAVVIGSVRRGPLGINARPS 60

Query: 61  AFSISKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVTKEDIRELFSEI 120
           AFSISKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVTKEDIRELFSEI
Sbjct: 61  AFSISKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVTKEDIRELFSEI 120

Query: 121 GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEILGDNAEMPV 180
           GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIE+LGDNA+ PV
Sbjct: 121 GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEMLGDNADTPV 180

Query: 181 SARINVTGLNGRSRRTVVLTSESGRTDSSTVVNHFPGPSNRGAL---RGRGRGRGGWSR- 240
           SARINVTG+NGRSRRTVVLTSESGRT SS  VN FPGPS+RG L   RGRGRGRGGWSR 
Sbjct: 181 SARINVTGVNGRSRRTVVLTSESGRTGSSNAVNPFPGPSHRGGLRSGRGRGRGRGGWSRG 240

Query: 241 -----GQGQVGGGRGRGR----GRGRGLGRKKTVEKSSDELDKDLENYHAEAMQT 282
                G+G  GGGRGRGR    GRGRG GRKK VEKSS ELDK+LENYHAEAMQT
Sbjct: 241 LGGGGGRGLGGGGRGRGRGSGSGRGRGQGRKKPVEKSSAELDKELENYHAEAMQT 295

[Close]

BLAST of Moc08g36300 vs. NCBI nr
Match: XP_022935328.1 (THO complex subunit 4D-like [Cucurbita moschata] >XP_022935329.1 THO complex subunit 4D-like [Cucurbita moschata] >XP_022935330.1 THO complex subunit 4D-like [Cucurbita moschata])

HSP 1 Score: 474.9 bits (1221), Expect = 4.7e-130
Identity = 259/295 (87.80%), Postives = 268/295 (90.85%), Query Frame = 0


Query: 1   MATPLDMSLEDMIKKNNREKLRARGRARRGRGAGGSFNGGR-VVIGSIRRGPLSINTRPS 60
           MATPLDMSLED+IKKNNREKLRARGRARRGRGAGGS+NGGR VVIGS+RRGPL IN RPS
Sbjct: 1   MATPLDMSLEDVIKKNNREKLRARGRARRGRGAGGSYNGGRAVVIGSVRRGPLGINARPS 60

Query: 61  AFSISKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVTKEDIRELFSEI 120
           AFSISKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVTKEDIRELFSEI
Sbjct: 61  AFSISKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVTKEDIRELFSEI 120

Query: 121 GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEILGDNAEMPV 180
           GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIE+LGDNA+ PV
Sbjct: 121 GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEMLGDNADTPV 180

Query: 181 SARINVTGLNGRSRRTVVLTSESGRTDSSTVVNHFPGPSNRGAL---RGRGRGRGGWSR- 240
           SARINVTG+NGRSRRTVVLTSESGRT SS  VN FPGPS+RG L   RGRGRGRGGWSR 
Sbjct: 181 SARINVTGVNGRSRRTVVLTSESGRTGSSHAVNPFPGPSHRGGLRSGRGRGRGRGGWSRG 240

Query: 241 -----GQGQVGGGRGRGR----GRGRGLGRKKTVEKSSDELDKDLENYHAEAMQT 282
                G+G  GGGRGRGR    GRGRG GRKK VEKSS ELDK+LENYHAEAMQT
Sbjct: 241 LGGGGGRGLGGGGRGRGRGSGSGRGRGQGRKKPVEKSSAELDKELENYHAEAMQT 295

[Close]

BLAST of Moc08g36300 vs. NCBI nr
Match: XP_022982649.1 (THO complex subunit 4D-like [Cucurbita maxima] >XP_022982650.1 THO complex subunit 4D-like [Cucurbita maxima] >XP_022982651.1 THO complex subunit 4D-like [Cucurbita maxima])

HSP 1 Score: 470.7 bits (1210), Expect = 8.8e-129
Identity = 259/305 (84.92%), Postives = 267/305 (87.54%), Query Frame = 0


Query: 1   MATPLDMSLEDMIKKNNREKLRARGRARRGRGAGGSFNGGR-VVIGSIRRGPLSINTRPS 60
           MATPLDMSLED+IKKNNREKLRARGRARRGRGAGGS+NGGR VVIGS+RRGPL IN RPS
Sbjct: 1   MATPLDMSLEDVIKKNNREKLRARGRARRGRGAGGSYNGGRAVVIGSVRRGPLGINARPS 60

Query: 61  AFSISKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVTKEDIRELFSEI 120
           AFSISKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVTKEDIRELFSEI
Sbjct: 61  AFSISKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVTKEDIRELFSEI 120

Query: 121 GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEILGDNAEMPV 180
           GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIE+LGDNA+ PV
Sbjct: 121 GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEMLGDNADTPV 180

Query: 181 SARINVTGLNGRSRRTVVLTSESGRTDSSTVVNHFPGPSNRGALR-GRGRGRGGWSRGQG 240
           SARINVTG+NGRSRRTVVLTSESGRT SS  VN FPGPS+RG LR GRGRGRGGWSRG G
Sbjct: 181 SARINVTGVNGRSRRTVVLTSESGRTGSSNAVNPFPGPSHRGGLRSGRGRGRGGWSRGLG 240

Query: 241 QVGG--------------GRGRGR--------GRGRGLGRKKTVEKSSDELDKDLENYHA 282
             GG              GRGRGR        GRGRG GRKK VEKSS ELDK+LENYHA
Sbjct: 241 GGGGRGLGGGGGRGLGGRGRGRGRGSGSGSGSGRGRGQGRKKPVEKSSAELDKELENYHA 300

[Close]

BLAST of Moc08g36300 vs. ExPASy Swiss-Prot
Match: Q6NQ72 (THO complex subunit 4D OS=Arabidopsis thaliana OX=3702 GN=ALY4 PE=1 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 6.5e-74
Identity = 166/297 (55.89%), Postives = 215/297 (72.39%), Query Frame = 0


Query: 1   MATPLDMSLEDMIKKNNREKLRARGRAR-RGRGAGGSFNGGRVVIGSIRRGPLSINTRPS 60
           M+  L+M+L++++K+    +   RG +R RGRG GG   GGR   G  RRGPL++N RPS
Sbjct: 1   MSGALNMTLDEIVKRGKTARSGGRGISRGRGRGRGG---GGRGA-GPARRGPLAVNARPS 60

Query: 61  AFSISKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVTKEDIRELFSEI 120
           +F+I+KP RR++++ WQ  LFED LRA+G SG+E+GT+L+V+NLD GVT EDIRELFSEI
Sbjct: 61  SFTINKPVRRVRSLPWQSGLFEDGLRAAGASGVEVGTRLHVTNLDQGVTNEDIRELFSEI 120

Query: 121 GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEILGDN--AEM 180
           G+++R+AIHYDKNGRPSG+AEVVY RRSDAF ALK+YNNVLLDG+PM++EILG N  +E 
Sbjct: 121 GEVERYAIHYDKNGRPSGTAEVVYPRRSDAFQALKKYNNVLLDGRPMRLEILGGNNSSEA 180

Query: 181 PVSAR--INVTGLNGRSRRTVVLT-----------SESGRTDSSTVVNHFPGPSNRGALR 240
           P+S R  +NVTGLNGR +RTVV+               GR  + TV    P  + +G   
Sbjct: 181 PLSGRVNVNVTGLNGRLKRTVVIQQGGGGRGRVRGGRGGRGPAPTVSRRLPIHNQQGG-- 240

Query: 241 GRGRGRGGWSRGQGQVGGGRGRGRGRGRGLGRKKTVEKSSDELDKDLENYHAEAMQT 282
           G   GRGG+ R +G+  GGRGRG GRG G   KK VEKS+ +LDKDLE+YHA+AM T
Sbjct: 241 GMRGGRGGF-RARGRGNGGRGRGGGRGNG---KKPVEKSAADLDKDLESYHADAMNT 287

[Close]

BLAST of Moc08g36300 vs. ExPASy Swiss-Prot
Match: Q94EH8 (THO complex subunit 4C OS=Arabidopsis thaliana OX=3702 GN=ALY3 PE=1 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 4.8e-69
Identity = 165/309 (53.40%), Postives = 210/309 (67.96%), Query Frame = 0


Query: 1   MATPLDMSLEDMIKKNNREKLRA-----RGRAR---RGRGAGGSFNGGRVVIGSIRRGPL 60
           M+  L+M+L++++KK+  E+  A     +G +R   RGRG      GG    G +RRGPL
Sbjct: 1   MSDALNMTLDEIVKKSKSERSAAARSGGKGVSRKSGRGRGGPNGVVGGGRGGGPVRRGPL 60

Query: 61  SINTRP-SAFSISKPPRRMKNVQW--QHDLFEDSLRASGISGIEIGTKLYVSNLDYGVTK 120
           ++NTRP S+FSI+K  RR +++ W  Q+DL+E++LRA G+SG+E+GT +Y++NLD GVT 
Sbjct: 61  AVNTRPSSSFSINKLARRKRSLPWQNQNDLYEETLRAVGVSGVEVGTTVYITNLDQGVTN 120

Query: 121 EDIRELFSEIGDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIE 180
           EDIREL++EIG+LKR+AIHYDKNGRPSGSAEVVY RRSDA  A+++YNNVLLDG+PMK+E
Sbjct: 121 EDIRELYAEIGELKRYAIHYDKNGRPSGSAEVVYMRRSDAIQAMRKYNNVLLDGRPMKLE 180

Query: 181 ILGDNAE-MPVSARINVTGLNGRSRRTVVLTSESGRTDSSTVVNHFPGPSNRGALRGRGR 240
           ILG N E  PV+AR+NVTGLNGR +R+V                 F G   RG   GRGR
Sbjct: 181 ILGGNTESAPVAARVNVTGLNGRMKRSV-----------------FIGQGVRGGRVGRGR 240

Query: 241 GRGGWSR-------GQGQVGGGRG--RGRGRGRGLGR---------KKTVEKSSDELDKD 280
           G G   R        QG V  GRG  RGRGRG G GR         KK VEKS+ +LDKD
Sbjct: 241 GSGPSGRRLPLQQNQQGGVTAGRGGFRGRGRGNGGGRGNKSGGRGGKKPVEKSAADLDKD 292

[Close]

BLAST of Moc08g36300 vs. ExPASy Swiss-Prot
Match: Q8L773 (THO complex subunit 4A OS=Arabidopsis thaliana OX=3702 GN=ALY1 PE=1 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 3.7e-45
Identity = 125/285 (43.86%), Postives = 165/285 (57.89%), Query Frame = 0


Query: 1   MATPLDMSLEDMIKKNNREKLRARGRARRGRGAGGSFNGGRVVIGSIRRGPLSINTRPSA 60
           M+T LDMSL+DMI KN     ++RG A   RG G     G     + R  P   +TR + 
Sbjct: 1   MSTGLDMSLDDMIAKNR----KSRGGAGPARGTGSGSGPG----PTRRNNPNRKSTRSAP 60

Query: 61  FSISKPPRRMKNVQWQHDLF----EDSLRASGISGIEIGTKLYVSNLDYGVTKEDIRELF 120
           +  +K P       W HD+F    ED       +GIE GTKLY+SNLDYGV  EDI+ELF
Sbjct: 61  YQSAKAPES----TWGHDMFSDRSEDHRSGRSSAGIETGTKLYISNLDYGVMNEDIKELF 120

Query: 121 SEIGDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEILGDNAE 180
           +E+G+LKR+ +H+D++GR  G+AEVVY+RR DA AA+K+YN+V LDGKPMKIEI+G N +
Sbjct: 121 AEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDALAAVKKYNDVQLDGKPMKIEIVGTNLQ 180

Query: 181 MPVSARINVTGLNGRSRRTVVLTSESGRTDSSTVVNHFPGPSNRGALRGRGRGRGGWSRG 240
                                  + SGR  +        G SN    RG G+GRGG  RG
Sbjct: 181 --------------------TAAAPSGRPAN--------GNSNGAPWRG-GQGRGGQQRG 240

Query: 241 QGQVGGGRGRGRGRGRGLGRKKTVEKSSDELDKDLENYHAEAMQT 282
            G+ GGGRG G GRGR  G+    + S+++LD DL+ YH+  M+T
Sbjct: 241 GGRGGGGRG-GGGRGRRPGKGPAEKISAEDLDADLDKYHSGDMET 243

[Close]

BLAST of Moc08g36300 vs. ExPASy Swiss-Prot
Match: Q8L719 (THO complex subunit 4B OS=Arabidopsis thaliana OX=3702 GN=ALY2 PE=1 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 2.2e-42
Identity = 135/305 (44.26%), Postives = 179/305 (58.69%), Query Frame = 0


Query: 1   MATPLDMSLEDMIKKNNREKLRARGRARRGRGAGGSFNGGRVVIGS----IRRGPLSINT 60
           M+  LDMSL+D+I K+NR+   +RGR   G   GG+  GGR   GS     RR    +  
Sbjct: 1   MSGGLDMSLDDII-KSNRKPTGSRGRGGIG---GGNNTGGRGGSGSNSGPSRRFANRVGA 60

Query: 61  RPSAFSISKPPRRMKNVQWQHDLF--EDSLRAS----------GISGIEIGTKLYVSNLD 120
           R + +S     ++  +  WQ+D+F  + S+ A+          G S IE GTKLY+SNLD
Sbjct: 61  RTAPYSRPIQQQQAHDAMWQNDVFATDASVAAAFGHHQTAVVGGGSSIETGTKLYISNLD 120

Query: 121 YGVTKEDIRELFSEIGDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGK 180
           YGV+ EDI+ELFSE+GDLKR+ IHYD++GR  G+AEVV++RR DA AA+KRYNNV LDGK
Sbjct: 121 YGVSNEDIKELFSEVGDLKRYGIHYDRSGRSKGTAEVVFSRRGDALAAVKRYNNVQLDGK 180

Query: 181 PMKIEILGDNAEMPVSARINVTGLNGRSRRTVVLTSESGRTDSSTVVNHFPGPSNRGALR 240
            MKIEI+G N   P    +    +   +   +   +E+          +F G  N G  R
Sbjct: 181 LMKIEIVGTNLSAPALPILATAQIPFPTNGILGNFNENFN-------GNFNGNFN-GNFR 240

Query: 241 GRGRG------RGGWSRGQGQVGGGRG-RGR-GRGRGLGRKKTVEKSSDELDKDLENYHA 282
           GRGRG      RGG   G G   GGRG RGR GRG G GR +    S+++LD +L+ YH 
Sbjct: 241 GRGRGGFMGRPRGG-GFGGGNFRGGRGARGRGGRGSG-GRGRDENVSAEDLDAELDKYHK 291

[Close]

BLAST of Moc08g36300 vs. ExPASy Swiss-Prot
Match: B5FXN8 (THO complex subunit 4 OS=Taeniopygia guttata OX=59729 GN=ALYREF PE=2 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 4.5e-35
Identity = 112/286 (39.16%), Postives = 151/286 (52.80%), Query Frame = 0


Query: 1   MATPLDMSLEDMIKKNNREKLRARGRARRGRGAGGSFNG---GRVVIGSIRRGPLSINTR 60
           MA  +DMSL+D+IK N  ++  +RG  R GRG GG+  G   GR  +G  R G   +  R
Sbjct: 1   MADKMDMSLDDIIKLNRSQRGASRG-GRGGRGRGGTARGGGPGRGGVGGGRAGGGPVRNR 60

Query: 61  P-----SAFSISKPPRRMKNV--QWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVTKE 120
           P        +   P  R K +  +WQHDLF+    A   +G+E G KL VSNLD+GV+  
Sbjct: 61  PVMARGGGRNRPAPYSRPKQLPEKWQHDLFDSGFGAG--AGVETGGKLLVSNLDFGVSDA 120

Query: 121 DIRELFSEIGDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEI 180
           DI+ELF+E G LK+ A+HYD++GR  G+A+V + R++DA  A+K+YN V LDG+PM I++
Sbjct: 121 DIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL 180

Query: 181 LGDNAEMPVSARINVTGLNGRSRRTVVLTSESGRTDSSTVVNHFPGPSNRGALRGRGRGR 240
                         VT      RR     +  G T             NRG L G G   
Sbjct: 181 --------------VTSQIDTQRRPAQSVNRGGMT------------RNRGVLGGFG--- 240

Query: 241 GGWSRGQGQVGGGRGRGRGRGRGLGRKKTVEKSSDELDKDLENYHA 277
                G G   G RG  RGRGRG GR    + S++ELD  L+ Y+A
Sbjct: 241 -----GGGNRRGTRGGNRGRGRGAGRTSKQQLSAEELDAQLDAYNA 249

[Close]

BLAST of Moc08g36300 vs. ExPASy TrEMBL
Match: A0A6J1CP51 (THO complex subunit 4D-like OS=Momordica charantia OX=3673 GN=LOC111013262 PE=4 SV=1)

HSP 1 Score: 540.0 bits (1390), Expect = 5.7e-150
Identity = 281/281 (100.00%), Postives = 281/281 (100.00%), Query Frame = 0


Query: 1   MATPLDMSLEDMIKKNNREKLRARGRARRGRGAGGSFNGGRVVIGSIRRGPLSINTRPSA 60
           MATPLDMSLEDMIKKNNREKLRARGRARRGRGAGGSFNGGRVVIGSIRRGPLSINTRPSA
Sbjct: 1   MATPLDMSLEDMIKKNNREKLRARGRARRGRGAGGSFNGGRVVIGSIRRGPLSINTRPSA 60

Query: 61  FSISKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVTKEDIRELFSEIG 120
           FSISKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVTKEDIRELFSEIG
Sbjct: 61  FSISKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVTKEDIRELFSEIG 120

Query: 121 DLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEILGDNAEMPVS 180
           DLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEILGDNAEMPVS
Sbjct: 121 DLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEILGDNAEMPVS 180

Query: 181 ARINVTGLNGRSRRTVVLTSESGRTDSSTVVNHFPGPSNRGALRGRGRGRGGWSRGQGQV 240
           ARINVTGLNGRSRRTVVLTSESGRTDSSTVVNHFPGPSNRGALRGRGRGRGGWSRGQGQV
Sbjct: 181 ARINVTGLNGRSRRTVVLTSESGRTDSSTVVNHFPGPSNRGALRGRGRGRGGWSRGQGQV 240

Query: 241 GGGRGRGRGRGRGLGRKKTVEKSSDELDKDLENYHAEAMQT 282
           GGGRGRGRGRGRGLGRKKTVEKSSDELDKDLENYHAEAMQT
Sbjct: 241 GGGRGRGRGRGRGLGRKKTVEKSSDELDKDLENYHAEAMQT 281

[Close]

BLAST of Moc08g36300 vs. ExPASy TrEMBL
Match: A0A6J1FAB9 (THO complex subunit 4D-like OS=Cucurbita moschata OX=3662 GN=LOC111442248 PE=4 SV=1)

HSP 1 Score: 474.9 bits (1221), Expect = 2.3e-130
Identity = 259/295 (87.80%), Postives = 268/295 (90.85%), Query Frame = 0


Query: 1   MATPLDMSLEDMIKKNNREKLRARGRARRGRGAGGSFNGGR-VVIGSIRRGPLSINTRPS 60
           MATPLDMSLED+IKKNNREKLRARGRARRGRGAGGS+NGGR VVIGS+RRGPL IN RPS
Sbjct: 1   MATPLDMSLEDVIKKNNREKLRARGRARRGRGAGGSYNGGRAVVIGSVRRGPLGINARPS 60

Query: 61  AFSISKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVTKEDIRELFSEI 120
           AFSISKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVTKEDIRELFSEI
Sbjct: 61  AFSISKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVTKEDIRELFSEI 120

Query: 121 GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEILGDNAEMPV 180
           GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIE+LGDNA+ PV
Sbjct: 121 GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEMLGDNADTPV 180

Query: 181 SARINVTGLNGRSRRTVVLTSESGRTDSSTVVNHFPGPSNRGAL---RGRGRGRGGWSR- 240
           SARINVTG+NGRSRRTVVLTSESGRT SS  VN FPGPS+RG L   RGRGRGRGGWSR 
Sbjct: 181 SARINVTGVNGRSRRTVVLTSESGRTGSSHAVNPFPGPSHRGGLRSGRGRGRGRGGWSRG 240

Query: 241 -----GQGQVGGGRGRGR----GRGRGLGRKKTVEKSSDELDKDLENYHAEAMQT 282
                G+G  GGGRGRGR    GRGRG GRKK VEKSS ELDK+LENYHAEAMQT
Sbjct: 241 LGGGGGRGLGGGGRGRGRGSGSGRGRGQGRKKPVEKSSAELDKELENYHAEAMQT 295

[Close]

BLAST of Moc08g36300 vs. ExPASy TrEMBL
Match: A0A6J1J564 (THO complex subunit 4D-like OS=Cucurbita maxima OX=3661 GN=LOC111481464 PE=4 SV=1)

HSP 1 Score: 470.7 bits (1210), Expect = 4.3e-129
Identity = 259/305 (84.92%), Postives = 267/305 (87.54%), Query Frame = 0


Query: 1   MATPLDMSLEDMIKKNNREKLRARGRARRGRGAGGSFNGGR-VVIGSIRRGPLSINTRPS 60
           MATPLDMSLED+IKKNNREKLRARGRARRGRGAGGS+NGGR VVIGS+RRGPL IN RPS
Sbjct: 1   MATPLDMSLEDVIKKNNREKLRARGRARRGRGAGGSYNGGRAVVIGSVRRGPLGINARPS 60

Query: 61  AFSISKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVTKEDIRELFSEI 120
           AFSISKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVTKEDIRELFSEI
Sbjct: 61  AFSISKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVTKEDIRELFSEI 120

Query: 121 GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEILGDNAEMPV 180
           GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIE+LGDNA+ PV
Sbjct: 121 GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEMLGDNADTPV 180

Query: 181 SARINVTGLNGRSRRTVVLTSESGRTDSSTVVNHFPGPSNRGALR-GRGRGRGGWSRGQG 240
           SARINVTG+NGRSRRTVVLTSESGRT SS  VN FPGPS+RG LR GRGRGRGGWSRG G
Sbjct: 181 SARINVTGVNGRSRRTVVLTSESGRTGSSNAVNPFPGPSHRGGLRSGRGRGRGGWSRGLG 240

Query: 241 QVGG--------------GRGRGR--------GRGRGLGRKKTVEKSSDELDKDLENYHA 282
             GG              GRGRGR        GRGRG GRKK VEKSS ELDK+LENYHA
Sbjct: 241 GGGGRGLGGGGGRGLGGRGRGRGRGSGSGSGSGRGRGQGRKKPVEKSSAELDKELENYHA 300

[Close]

BLAST of Moc08g36300 vs. ExPASy TrEMBL
Match: A0A1S3C452 (THO complex subunit 4D OS=Cucumis melo OX=3656 GN=LOC103496802 PE=4 SV=1)

HSP 1 Score: 466.1 bits (1198), Expect = 1.1e-127
Identity = 250/285 (87.72%), Postives = 260/285 (91.23%), Query Frame = 0


Query: 1   MATPLDMSLEDMIKKNNREKLRARGRARRGRGAGGSFNGGR-VVIGSIRRGPLSINTRPS 60
           M TPLDMSLED+IKKNNREKLRARGRARRGRGAGGSFNGGR VVIGS+RRGPL IN R S
Sbjct: 1   MTTPLDMSLEDVIKKNNREKLRARGRARRGRGAGGSFNGGRGVVIGSVRRGPLGINARAS 60

Query: 61  AFSISKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVTKEDIRELFSEI 120
           A+SI KPP RMKNVQWQHDLFEDSLRASGISGI+IGTKLYVSNLDYGVTKEDIRELFSEI
Sbjct: 61  AYSIRKPPHRMKNVQWQHDLFEDSLRASGISGIQIGTKLYVSNLDYGVTKEDIRELFSEI 120

Query: 121 GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEILGDNAEMPV 180
           GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIE+LGDNAEMPV
Sbjct: 121 GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEMLGDNAEMPV 180

Query: 181 SARINVTGLNGRSRRTVVLTSESGRTDSSTVVNHFPGPSNRGALR-GRGRGRGGWSR--G 240
           SARINVTG NGR+RRTVVLT ESGR  +  VVN FPGPS+RG LR  RGRGRG W+R  G
Sbjct: 181 SARINVTGTNGRNRRTVVLTPESGRNATFNVVNPFPGPSHRGGLRNARGRGRGAWTRGVG 240

Query: 241 QGQVGGGRGRGRGRGRGLGRKKTVEKSSDELDKDLENYHAEAMQT 282
            G  GGGRGRGRGRGRG GRKK VEKSSDELDK+LENYHAEAMQT
Sbjct: 241 LGGSGGGRGRGRGRGRGQGRKKPVEKSSDELDKELENYHAEAMQT 285

[Close]

BLAST of Moc08g36300 vs. ExPASy TrEMBL
Match: A0A0A0L717 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G302100 PE=4 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 7.4e-97
Identity = 184/200 (92.00%), Postives = 192/200 (96.00%), Query Frame = 0


Query: 1   MATPLDMSLEDMIKKNNREKLRARGRARRGRGAGGSFNGGR-VVIGSIRRGPLSINTRPS 60
           M TPLDMSLED+IKKNNREKLRARGRARRGRGAGGSFNGGR VVIGS+RRGPL IN R S
Sbjct: 1   MTTPLDMSLEDVIKKNNREKLRARGRARRGRGAGGSFNGGRGVVIGSVRRGPLGINARAS 60

Query: 61  AFSISKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVTKEDIRELFSEI 120
           A+SI KPP RMKNVQWQHDLFEDSLRASGISGI+IGTKLYVSNLDYGVTKEDI+ELFSEI
Sbjct: 61  AYSIRKPPHRMKNVQWQHDLFEDSLRASGISGIQIGTKLYVSNLDYGVTKEDIKELFSEI 120

Query: 121 GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEILGDNAEMPV 180
           GD+KRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIE+LGDNAEMPV
Sbjct: 121 GDVKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEMLGDNAEMPV 180

Query: 181 SARINVTGLNGRSRRTVVLT 200
           SARINVTG NGR+RRTVVLT
Sbjct: 181 SARINVTGTNGRNRRTVVLT 200

[Close]

BLAST of Moc08g36300 vs. TAIR 10
Match: AT5G37720.2 (ALWAYS EARLY 4 )

HSP 1 Score: 282.0 bits (720), Expect = 5.4e-76
Identity = 166/289 (57.44%), Postives = 215/289 (74.39%), Query Frame = 0


Query: 1   MATPLDMSLEDMIKKNNREKLRARGRAR-RGRGAGGSFNGGRVVIGSIRRGPLSINTRPS 60
           M+  L+M+L++++K+    +   RG +R RGRG GG   GGR   G  RRGPL++N RPS
Sbjct: 1   MSGALNMTLDEIVKRGKTARSGGRGISRGRGRGRGG---GGRGA-GPARRGPLAVNARPS 60

Query: 61  AFSISKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVTKEDIRELFSEI 120
           +F+I+KP RR++++ WQ  LFED LRA+G SG+E+GT+L+V+NLD GVT EDIRELFSEI
Sbjct: 61  SFTINKPVRRVRSLPWQSGLFEDGLRAAGASGVEVGTRLHVTNLDQGVTNEDIRELFSEI 120

Query: 121 GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEILGDN--AEM 180
           G+++R+AIHYDKNGRPSG+AEVVY RRSDAF ALK+YNNVLLDG+PM++EILG N  +E 
Sbjct: 121 GEVERYAIHYDKNGRPSGTAEVVYPRRSDAFQALKKYNNVLLDGRPMRLEILGGNNSSEA 180

Query: 181 PVSAR--INVTGLNGRSRRTVVLT---SESGRTDSSTVVNHFPGPSNRGALRGRGRGRGG 240
           P+S R  +NVTGLNGR +RTVV+       GR  + TV    P  + +G   G   GRGG
Sbjct: 181 PLSGRVNVNVTGLNGRLKRTVVIQVRGGRGGRGPAPTVSRRLPIHNQQGG--GMRGGRGG 240

Query: 241 WSRGQGQVGGGRGRGRGRGRGLGRKKTVEKSSDELDKDLENYHAEAMQT 282
           + R +G+  GGRGRG GRG G   KK VEKS+ +LDKDLE+YHA+AM T
Sbjct: 241 F-RARGRGNGGRGRGGGRGNG---KKPVEKSAADLDKDLESYHADAMNT 279

[Close]

BLAST of Moc08g36300 vs. TAIR 10
Match: AT5G37720.1 (ALWAYS EARLY 4 )

HSP 1 Score: 278.9 bits (712), Expect = 4.6e-75
Identity = 166/297 (55.89%), Postives = 215/297 (72.39%), Query Frame = 0


Query: 1   MATPLDMSLEDMIKKNNREKLRARGRAR-RGRGAGGSFNGGRVVIGSIRRGPLSINTRPS 60
           M+  L+M+L++++K+    +   RG +R RGRG GG   GGR   G  RRGPL++N RPS
Sbjct: 1   MSGALNMTLDEIVKRGKTARSGGRGISRGRGRGRGG---GGRGA-GPARRGPLAVNARPS 60

Query: 61  AFSISKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVTKEDIRELFSEI 120
           +F+I+KP RR++++ WQ  LFED LRA+G SG+E+GT+L+V+NLD GVT EDIRELFSEI
Sbjct: 61  SFTINKPVRRVRSLPWQSGLFEDGLRAAGASGVEVGTRLHVTNLDQGVTNEDIRELFSEI 120

Query: 121 GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEILGDN--AEM 180
           G+++R+AIHYDKNGRPSG+AEVVY RRSDAF ALK+YNNVLLDG+PM++EILG N  +E 
Sbjct: 121 GEVERYAIHYDKNGRPSGTAEVVYPRRSDAFQALKKYNNVLLDGRPMRLEILGGNNSSEA 180

Query: 181 PVSAR--INVTGLNGRSRRTVVLT-----------SESGRTDSSTVVNHFPGPSNRGALR 240
           P+S R  +NVTGLNGR +RTVV+               GR  + TV    P  + +G   
Sbjct: 181 PLSGRVNVNVTGLNGRLKRTVVIQQGGGGRGRVRGGRGGRGPAPTVSRRLPIHNQQGG-- 240

Query: 241 GRGRGRGGWSRGQGQVGGGRGRGRGRGRGLGRKKTVEKSSDELDKDLENYHAEAMQT 282
           G   GRGG+ R +G+  GGRGRG GRG G   KK VEKS+ +LDKDLE+YHA+AM T
Sbjct: 241 GMRGGRGGF-RARGRGNGGRGRGGGRGNG---KKPVEKSAADLDKDLESYHADAMNT 287

[Close]

BLAST of Moc08g36300 vs. TAIR 10
Match: AT1G66260.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 262.7 bits (670), Expect = 3.4e-70
Identity = 165/309 (53.40%), Postives = 210/309 (67.96%), Query Frame = 0


Query: 1   MATPLDMSLEDMIKKNNREKLRA-----RGRAR---RGRGAGGSFNGGRVVIGSIRRGPL 60
           M+  L+M+L++++KK+  E+  A     +G +R   RGRG      GG    G +RRGPL
Sbjct: 1   MSDALNMTLDEIVKKSKSERSAAARSGGKGVSRKSGRGRGGPNGVVGGGRGGGPVRRGPL 60

Query: 61  SINTRP-SAFSISKPPRRMKNVQW--QHDLFEDSLRASGISGIEIGTKLYVSNLDYGVTK 120
           ++NTRP S+FSI+K  RR +++ W  Q+DL+E++LRA G+SG+E+GT +Y++NLD GVT 
Sbjct: 61  AVNTRPSSSFSINKLARRKRSLPWQNQNDLYEETLRAVGVSGVEVGTTVYITNLDQGVTN 120

Query: 121 EDIRELFSEIGDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIE 180
           EDIREL++EIG+LKR+AIHYDKNGRPSGSAEVVY RRSDA  A+++YNNVLLDG+PMK+E
Sbjct: 121 EDIRELYAEIGELKRYAIHYDKNGRPSGSAEVVYMRRSDAIQAMRKYNNVLLDGRPMKLE 180

Query: 181 ILGDNAE-MPVSARINVTGLNGRSRRTVVLTSESGRTDSSTVVNHFPGPSNRGALRGRGR 240
           ILG N E  PV+AR+NVTGLNGR +R+V                 F G   RG   GRGR
Sbjct: 181 ILGGNTESAPVAARVNVTGLNGRMKRSV-----------------FIGQGVRGGRVGRGR 240

Query: 241 GRGGWSR-------GQGQVGGGRG--RGRGRGRGLGR---------KKTVEKSSDELDKD 280
           G G   R        QG V  GRG  RGRGRG G GR         KK VEKS+ +LDKD
Sbjct: 241 GSGPSGRRLPLQQNQQGGVTAGRGGFRGRGRGNGGGRGNKSGGRGGKKPVEKSAADLDKD 292

[Close]

BLAST of Moc08g36300 vs. TAIR 10
Match: AT1G66260.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 262.7 bits (670), Expect = 3.4e-70
Identity = 165/309 (53.40%), Postives = 210/309 (67.96%), Query Frame = 0


Query: 1   MATPLDMSLEDMIKKNNREKLRA-----RGRAR---RGRGAGGSFNGGRVVIGSIRRGPL 60
           M+  L+M+L++++KK+  E+  A     +G +R   RGRG      GG    G +RRGPL
Sbjct: 1   MSDALNMTLDEIVKKSKSERSAAARSGGKGVSRKSGRGRGGPNGVVGGGRGGGPVRRGPL 60

Query: 61  SINTRP-SAFSISKPPRRMKNVQW--QHDLFEDSLRASGISGIEIGTKLYVSNLDYGVTK 120
           ++NTRP S+FSI+K  RR +++ W  Q+DL+E++LRA G+SG+E+GT +Y++NLD GVT 
Sbjct: 61  AVNTRPSSSFSINKLARRKRSLPWQNQNDLYEETLRAVGVSGVEVGTTVYITNLDQGVTN 120

Query: 121 EDIRELFSEIGDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIE 180
           EDIREL++EIG+LKR+AIHYDKNGRPSGSAEVVY RRSDA  A+++YNNVLLDG+PMK+E
Sbjct: 121 EDIRELYAEIGELKRYAIHYDKNGRPSGSAEVVYMRRSDAIQAMRKYNNVLLDGRPMKLE 180

Query: 181 ILGDNAE-MPVSARINVTGLNGRSRRTVVLTSESGRTDSSTVVNHFPGPSNRGALRGRGR 240
           ILG N E  PV+AR+NVTGLNGR +R+V                 F G   RG   GRGR
Sbjct: 181 ILGGNTESAPVAARVNVTGLNGRMKRSV-----------------FIGQGVRGGRVGRGR 240

Query: 241 GRGGWSR-------GQGQVGGGRG--RGRGRGRGLGR---------KKTVEKSSDELDKD 280
           G G   R        QG V  GRG  RGRGRG G GR         KK VEKS+ +LDKD
Sbjct: 241 GSGPSGRRLPLQQNQQGGVTAGRGGFRGRGRGNGGGRGNKSGGRGGKKPVEKSAADLDKD 292

[Close]

BLAST of Moc08g36300 vs. TAIR 10
Match: AT5G59950.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 183.3 bits (464), Expect = 2.6e-46
Identity = 125/285 (43.86%), Postives = 165/285 (57.89%), Query Frame = 0


Query: 1   MATPLDMSLEDMIKKNNREKLRARGRARRGRGAGGSFNGGRVVIGSIRRGPLSINTRPSA 60
           M+T LDMSL+DMI KN     ++RG A   RG G     G     + R  P   +TR + 
Sbjct: 1   MSTGLDMSLDDMIAKNR----KSRGGAGPARGTGSGSGPG----PTRRNNPNRKSTRSAP 60

Query: 61  FSISKPPRRMKNVQWQHDLF----EDSLRASGISGIEIGTKLYVSNLDYGVTKEDIRELF 120
           +  +K P       W HD+F    ED       +GIE GTKLY+SNLDYGV  EDI+ELF
Sbjct: 61  YQSAKAPES----TWGHDMFSDRSEDHRSGRSSAGIETGTKLYISNLDYGVMNEDIKELF 120

Query: 121 SEIGDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEILGDNAE 180
           +E+G+LKR+ +H+D++GR  G+AEVVY+RR DA AA+K+YN+V LDGKPMKIEI+G N +
Sbjct: 121 AEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDALAAVKKYNDVQLDGKPMKIEIVGTNLQ 180

Query: 181 MPVSARINVTGLNGRSRRTVVLTSESGRTDSSTVVNHFPGPSNRGALRGRGRGRGGWSRG 240
                                  + SGR  +        G SN    RG G+GRGG  RG
Sbjct: 181 --------------------TAAAPSGRPAN--------GNSNGAPWRG-GQGRGGQQRG 240

Query: 241 QGQVGGGRGRGRGRGRGLGRKKTVEKSSDELDKDLENYHAEAMQT 282
            G+ GGGRG G GRGR  G+    + S+++LD DL+ YH+  M+T
Sbjct: 241 GGRGGGGRG-GGGRGRRPGKGPAEKISAEDLDADLDKYHSGDMET 243

The following BLAST results are available for this feature:

BLAST of Moc08g36300 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022143379.1	1.2e-149	100.00	THO complex subunit 4D-like [Momordica charantia]	[more]
XP_038896761.1	1.5e-131	89.82	THO complex subunit 4D-like [Benincasa hispida]	[more]
XP_023527122.1	2.7e-130	87.80	THO complex subunit 4D [Cucurbita pepo subsp. pepo]	[more]
XP_022935328.1	4.7e-130	87.80	THO complex subunit 4D-like [Cucurbita moschata] >XP_022935329.1 THO complex sub...	[more]
XP_022982649.1	8.8e-129	84.92	THO complex subunit 4D-like [Cucurbita maxima] >XP_022982650.1 THO complex subun...	[more]

BLAST of Moc08g36300 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NQ72	6.5e-74	55.89	THO complex subunit 4D OS=Arabidopsis thaliana OX=3702 GN=ALY4 PE=1 SV=1	[more]
Q94EH8	4.8e-69	53.40	THO complex subunit 4C OS=Arabidopsis thaliana OX=3702 GN=ALY3 PE=1 SV=1	[more]
Q8L773	3.7e-45	43.86	THO complex subunit 4A OS=Arabidopsis thaliana OX=3702 GN=ALY1 PE=1 SV=1	[more]
Q8L719	2.2e-42	44.26	THO complex subunit 4B OS=Arabidopsis thaliana OX=3702 GN=ALY2 PE=1 SV=1	[more]
B5FXN8	4.5e-35	39.16	THO complex subunit 4 OS=Taeniopygia guttata OX=59729 GN=ALYREF PE=2 SV=1	[more]

BLAST of Moc08g36300 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CP51	5.7e-150	100.00	THO complex subunit 4D-like OS=Momordica charantia OX=3673 GN=LOC111013262 PE=4 ...	[more]
A0A6J1FAB9	2.3e-130	87.80	THO complex subunit 4D-like OS=Cucurbita moschata OX=3662 GN=LOC111442248 PE=4 S...	[more]
A0A6J1J564	4.3e-129	84.92	THO complex subunit 4D-like OS=Cucurbita maxima OX=3661 GN=LOC111481464 PE=4 SV=...	[more]
A0A1S3C452	1.1e-127	87.72	THO complex subunit 4D OS=Cucumis melo OX=3656 GN=LOC103496802 PE=4 SV=1	[more]
A0A0A0L717	7.4e-97	92.00	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G302100 PE=4 SV...	[more]

BLAST of Moc08g36300 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G37720.2	5.4e-76	57.44	ALWAYS EARLY 4	[more]
AT5G37720.1	4.6e-75	55.89	ALWAYS EARLY 4	[more]
AT1G66260.1	3.4e-70	53.40	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G66260.2	3.4e-70	53.40	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G59950.1	2.6e-46	43.86	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 257..281
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 200..281
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 200..215
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 254..275
None	No IPR available	PANTHER	PTHR19965:SF33	THO COMPLEX SUBUNIT 4C	coord: 1..281
None	No IPR available	PANTHER	PTHR19965	RNA AND EXPORT FACTOR BINDING PROTEIN	coord: 1..281
None	No IPR available	CDD	cd12680	RRM_THOC4	coord: 96..170 e-value: 1.11883E-41 score: 136.23
IPR025715	Chromatin target of PRMT1 protein, C-terminal	SMART	SM01218	FoP_duplication_2	coord: 215..281 e-value: 5.0E-9 score: 46.0
IPR025715	Chromatin target of PRMT1 protein, C-terminal	PFAM	PF13865	FoP_duplication	coord: 217..276 e-value: 3.9E-8 score: 33.8
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 97..169 e-value: 8.3E-19 score: 78.5
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 98..166 e-value: 8.6E-15 score: 54.3
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 96..173 score: 15.1357
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 93..172 e-value: 1.5E-21 score: 78.4
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 90..170

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc08g36300.1	Moc08g36300.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding