Moc08g35940 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc08g35940
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	plastid movement impaired 2
Location	chr8: 26515267 .. 26518149 (+)
RNA-Seq Expression	Moc08g35940
Synteny	Moc08g35940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAACGCCATGGGAGGAGGACGAAGAAGAAAAGGAAGAACAAAAGTGATGAAAATTGACGGCGAAACCATGAAATTAGCCACTCCAATCACAGCCTCAGAAGTTCTAAGCCAGCATCCGGACCACCGGCTGTTCGAATCCCAATCCCTCAGAAATCTGGGCCTCAGAGCCACCCCATTGGAGCCCCACCACCAACTCCACCCCAAAGCCCTCTATTTCCTCCTCCAATTGCCGCCGCTCCCCGCCCACGCGCCGCCGCTCCGCCGCGTCCAATCCGGCCTCCACGCCTCCGCCACCGACCGCCTCGAGTGGCTGATGCTCTCTCGCCGCTCCATTTCCGACCTCCACGTCGCTCGGCCGCCGGAACCATCCGCCGCCCCGCTGCAGGTCAAGTTCCGGCTGCCGACGGCGGAGATGGACAGGCTCCTCAACGAATGCGAGGATAAGGCGGAGGTGGCCCAGAGGATCCTCAATTTGTATGGCAGAGACACAGACCGATTTCGCGGCGGCCAAGGTCAGCTGCGGAGCACGGCCCAAGCGAGTACTTGTAAAGCGCGTGAGGTGCGGTTTCTTGCCACTCTTTTTCATTTTTGATTTTTTTTTAGTGAATAATCATTCGAATTTATAACTCCTGGATGGATTATATATACTTCAATTAGCTAGAGTACTATATCTAAAATTTTTATATTAATTCGTAACGGAAAATACCCAACTTTGCTCTACACCATTAAATATTTTAAAACTTATTTATTTTTCTTCAAAAAACACTTTTTATTTTTATATTTATCTCTTTTTATTTTTAAATATTTAATGGTGTTGATAACAAAGACGTTCCTTATAACAAATACTTTCTATTTGTAATTAATAAAGTATTTTAAATTATCATTTATTTAAACATAGTTGGTCCATATAAAGATATGAAAATGATAGTTTAAAATTTGTAACTATCCTGTCTTGATAGGTAATTAATTTAAAATTTTATAATGTTTTAGTCACTATTTTAATAAACTTTATCAGTGAAAAATATCATGATTTAGTATATATATATATTTTATATAATTTATAACATTTTGTCGATTTATATCCATCTACACTAATAAAAAATTCCTATACAACTAAATCGTTAGATTTTAAAGTTTAGGGATAAATCACAATTTATGTGAAAGTAGGTCCAAAGTGTTTTTTAATCTAGTTTTTATTATTTGTAATTAGTTTCAATTTAATTCTTATAGTTTTAAAAGTTTACAAATTTCGTCCATATAGTTTACTCAAATCTTCTAGAAGTCGAGAAAATTTTGATAGATTTAACAAAAATGTAAGGATTATGAATCAAAGCATGAACTTTGGGCCTTAAATTGTAACTTAGCCATAATAATTTTTTTTACAAAATATATTTAAAAATTGGGCTAATGTTTAGATTTTGCGTTAGACCCCTTTTTTTTCAAATGTAATTTTCAAATCTTAATGAAATTTCGGGAAAATAGTAAATCTTGACAATTACAATATTTTAATTTGAATTTTTTAGGATTAAAAGATAGTTTATAACGGTTAGTTCATCAAAACTTCAGTTCCATGAAAATAAAATAAAGAGATGACCAGAATTAGTCAAAGATAATTTTAATAAAAATAAAGAGTGGGGGTGGATTTATATATATTTGACTAACAAAATAGAAATATATATATATATATATATATATATTTTTGACTTTGATTAAAAAATTAAAAAAGAGGTTTTAATAAATAATAATCATAGTTGAAAAAAATGTCAAAGTAAATAAAGAACACATAAATATGGATATACAAGGAAGAAAAGGCAAAATAAATAAATAAATAAATAAATAAGTGAAGAAATATAAAACATCAAAAAGTATAGTTGGGGACACATCTTTTGCTTTGAATATGTGAAGGTTATCTTTACAATTTAAGATAATTGATTTTAGAAAATATTTTTTCTTTTTTTGGAAACAATTGAGAAAATGTTGACCAGCAATAACAATAGAATTTAGAAATTTGACTTTAGTATGTATTTTTTATCGTCACAACTTTTTTTTTCTTCTCAAATATAACAATGTGTGTTCTACATTATATTTAATTTAATTTAAATTATGTTATTTTGGTAAGTTTTAAATTTTTTTGCTATATTTAAAAATTTTATTTATGTAATTCCGTCGAGAATTTAAGCTACAAATTTGTTTTATATTTTTAATTATTAAGTTTTTTAATAATACCAATTTATTTTTGTTTTTTTTTTTCAAATCATCATTGTACCAGCCCTAATTTCCTGTTTGTAATGGAACTCCTCTTTAGGATATTTGAATGGTAGCTTATTATTATTATTTTTTAAAAGGTTGTAAATACGTATTTTTGTTAAAAAAAAAGGAAAAAAGAAAAGAAAAAGGAAAAATGTAATAACTCATTATTTTTTTTAATAATAATTGAAAAAATGTTCTTTGGTAGGAGACTTATGAATCATTGATTAACCTGAATATAATATTAGTAATCAAAATATTTTTATTTCATCGAATATTCATTTTTTTTAGTACAACACGTGGAGTTAGAATCAAACTCACACCCTCGTAATTGAATATTTATTAATTCATATAAATCAATGATTAAGTTGAACCAAGATATAATTATTAACCTACATATTGATTAACTATAATTTACAGTATTTACTAATTTACACATGTTCTAATTTTTTTCGTATTTACATTGTCTTTTTCCTGATTTTCTTTTTTAAGTATTTTGTTTAAATTAGCATTGATTTATAGCGATAGCAGTAGTCTTTTTTAATTCTAAAATAATAATCCTTTCTTAAATATAAAATATTTGCAGAAAAGAGTGAGCTTTGTTCAAATGAAGGACAGTCCTACGCAATAG

mRNA sequence

ATGGGAAACGCCATGGGAGGAGGACGAAGAAGAAAAGGAAGAACAAAAGTGATGAAAATTGACGGCGAAACCATGAAATTAGCCACTCCAATCACAGCCTCAGAAGTTCTAAGCCAGCATCCGGACCACCGGCTGTTCGAATCCCAATCCCTCAGAAATCTGGGCCTCAGAGCCACCCCATTGGAGCCCCACCACCAACTCCACCCCAAAGCCCTCTATTTCCTCCTCCAATTGCCGCCGCTCCCCGCCCACGCGCCGCCGCTCCGCCGCGTCCAATCCGGCCTCCACGCCTCCGCCACCGACCGCCTCGAGTGGCTGATGCTCTCTCGCCGCTCCATTTCCGACCTCCACGTCGCTCGGCCGCCGGAACCATCCGCCGCCCCGCTGCAGGTCAAGTTCCGGCTGCCGACGGCGGAGATGGACAGGCTCCTCAACGAATGCGAGGATAAGGCGGAGGTGGCCCAGAGGATCCTCAATTTGTATGGCAGAGACACAGACCGATTTCGCGGCGGCCAAGGTCAGCTGCGGAGCACGGCCCAAGCGAGTACTTGTAAAGCGCGTGAGAAAAGAGTGAGCTTTGTTCAAATGAAGGACAGTCCTACGCAATAG

Coding sequence (CDS)

ATGGGAAACGCCATGGGAGGAGGACGAAGAAGAAAAGGAAGAACAAAAGTGATGAAAATTGACGGCGAAACCATGAAATTAGCCACTCCAATCACAGCCTCAGAAGTTCTAAGCCAGCATCCGGACCACCGGCTGTTCGAATCCCAATCCCTCAGAAATCTGGGCCTCAGAGCCACCCCATTGGAGCCCCACCACCAACTCCACCCCAAAGCCCTCTATTTCCTCCTCCAATTGCCGCCGCTCCCCGCCCACGCGCCGCCGCTCCGCCGCGTCCAATCCGGCCTCCACGCCTCCGCCACCGACCGCCTCGAGTGGCTGATGCTCTCTCGCCGCTCCATTTCCGACCTCCACGTCGCTCGGCCGCCGGAACCATCCGCCGCCCCGCTGCAGGTCAAGTTCCGGCTGCCGACGGCGGAGATGGACAGGCTCCTCAACGAATGCGAGGATAAGGCGGAGGTGGCCCAGAGGATCCTCAATTTGTATGGCAGAGACACAGACCGATTTCGCGGCGGCCAAGGTCAGCTGCGGAGCACGGCCCAAGCGAGTACTTGTAAAGCGCGTGAGAAAAGAGTGAGCTTTGTTCAAATGAAGGACAGTCCTACGCAATAG

Protein sequence

MGNAMGGGRRRKGRTKVMKIDGETMKLATPITASEVLSQHPDHRLFESQSLRNLGLRATPLEPHHQLHPKALYFLLQLPPLPAHAPPLRRVQSGLHASATDRLEWLMLSRRSISDLHVARPPEPSAAPLQVKFRLPTAEMDRLLNECEDKAEVAQRILNLYGRDTDRFRGGQGQLRSTAQASTCKAREKRVSFVQMKDSPTQ

Homology

[Close]

BLAST of Moc08g35940 vs. NCBI nr
Match: XP_022143428.1 (uncharacterized protein At1g66480-like [Momordica charantia])

HSP 1 Score: 400.2 bits (1027), Expect = 1.1e-107
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   MGNAMGGGRRRKGRTKVMKIDGETMKLATPITASEVLSQHPDHRLFESQSLRNLGLRATP 60
           MGNAMGGGRRRKGRTKVMKIDGETMKLATPITASEVLSQHPDHRLFESQSLRNLGLRATP
Sbjct: 1   MGNAMGGGRRRKGRTKVMKIDGETMKLATPITASEVLSQHPDHRLFESQSLRNLGLRATP 60

Query: 61  LEPHHQLHPKALYFLLQLPPLPAHAPPLRRVQSGLHASATDRLEWLMLSRRSISDLHVAR 120
           LEPHHQLHPKALYFLLQLPPLPAHAPPLRRVQSGLHASATDRLEWLMLSRRSISDLHVAR
Sbjct: 61  LEPHHQLHPKALYFLLQLPPLPAHAPPLRRVQSGLHASATDRLEWLMLSRRSISDLHVAR 120

Query: 121 PPEPSAAPLQVKFRLPTAEMDRLLNECEDKAEVAQRILNLYGRDTDRFRGGQGQLRSTAQ 180
           PPEPSAAPLQVKFRLPTAEMDRLLNECEDKAEVAQRILNLYGRDTDRFRGGQGQLRSTAQ
Sbjct: 121 PPEPSAAPLQVKFRLPTAEMDRLLNECEDKAEVAQRILNLYGRDTDRFRGGQGQLRSTAQ 180

Query: 181 ASTCKAREKRVSFVQMKDSPTQ 203
           ASTCKAREKRVSFVQMKDSPTQ
Sbjct: 181 ASTCKAREKRVSFVQMKDSPTQ 202

[Close]

BLAST of Moc08g35940 vs. NCBI nr
Match: XP_038887072.1 (uncharacterized protein At1g66480-like [Benincasa hispida])

HSP 1 Score: 185.3 bits (469), Expect = 5.3e-43
Identity = 106/204 (51.96%), Postives = 128/204 (62.75%), Query Frame = 0


Query: 1   MGNAM---GGGRRRKGRTKVMKIDGETMKLATPITASEVLSQHPDHRLFESQSLRNLGLR 60
           MGN+M   G  RRRK  TKVMKI+GE  K+  P TA EV   HP+H L+ESQSL   GLR
Sbjct: 1   MGNSMGIRGSIRRRKRTTKVMKINGEAFKITLPTTAYEVTIHHPNHLLYESQSLEQFGLR 60

Query: 61  ATPLEPHHQLHPKALYFLLQLPPLPAHAPPLRRVQSGLHASATDRLEWLMLSRRSISDLH 120
           A PL+PHHQL PK LYFLLQLP L     PLRRV S LH SA+DRLE L+LSRRS+SDL 
Sbjct: 61  AKPLDPHHQLKPKTLYFLLQLPTLLGDHCPLRRVCSDLHLSASDRLECLLLSRRSVSDLQ 120

Query: 121 VAR-PPE------PSAAPLQVKFRLPTAEMDRLLNECEDKAEVAQRILNLYGRDTDRFRG 180
             R  P+       +A P+QVKFRLP  E +RL+ EC++K E  +RI++  GR  D   G
Sbjct: 121 TVRFDPQRLSTDGGAAKPVQVKFRLPRVEFERLMKECKNKVEATERIVDFCGRSRDNGDG 180

Query: 181 GQGQLRSTAQASTCKAREKRVSFV 195
           GQ           C  + + V F+
Sbjct: 181 GQDDELFGKMGDACSGKAREVCFL 204

[Close]

BLAST of Moc08g35940 vs. NCBI nr
Match: XP_022948507.1 (uncharacterized protein At1g66480-like [Cucurbita moschata])

HSP 1 Score: 184.1 bits (466), Expect = 1.2e-42
Identity = 108/203 (53.20%), Postives = 134/203 (66.01%), Query Frame = 0


Query: 1   MGNAMGGGRRRKGRT-KVMKIDGETMKLATPITASEVLSQHPDHRLFESQSLRNLGLRAT 60
           MGNAMGGG RR  RT KVMKI+GET K+ TP TA +V + HP+H L++SQS+  LGLRA 
Sbjct: 1   MGNAMGGGSRRSKRTAKVMKINGETFKIRTPTTAFQVTTHHPNHLLYDSQSITQLGLRAK 60

Query: 61  PLEPHHQLHPKALYFLLQLPPLPAHAPPLRRVQSGLHASATDRLEWLMLSRRSISDLHVA 120
           PL+PHHQL PK LYFLL LPPLP    PL RV+S L +SA+DRLE LMLSRRS+SDL   
Sbjct: 61  PLDPHHQLKPKTLYFLLHLPPLPGSHRPLSRVRSDLCSSASDRLECLMLSRRSVSDLQSF 120

Query: 121 R--PPEPSAA-----PLQVKFRLPTAEMDRLLNECEDKAEVAQRILNLYGRDTDRFRGGQ 180
           R  P   S A     P+Q+K R+P  E +RL+ E + K E A+RI++L+           
Sbjct: 121 RLDPDGMSTACRPTGPVQIKLRVPREEFERLMKESKSKVEAAERIVDLW----------- 180

Query: 181 GQLRSTAQASTCKAREKRVSFVQ 196
                T    + +AREKRVSFV+
Sbjct: 181 ----KTGGMCSGQAREKRVSFVK 188

[Close]

BLAST of Moc08g35940 vs. NCBI nr
Match: XP_022998216.1 (uncharacterized protein At1g66480-like [Cucurbita maxima])

HSP 1 Score: 181.0 bits (458), Expect = 1.0e-41
Identity = 107/203 (52.71%), Postives = 133/203 (65.52%), Query Frame = 0


Query: 1   MGNAMGGGRRRKGRT-KVMKIDGETMKLATPITASEVLSQHPDHRLFESQSLRNLGLRAT 60
           MGNAMG G RR  RT KVMKI+GET K+ TP TA +V + HP+H L++SQS+  LGLRA 
Sbjct: 1   MGNAMGRGSRRSKRTAKVMKINGETFKIRTPTTAFQVTTHHPNHLLYDSQSINQLGLRAK 60

Query: 61  PLEPHHQLHPKALYFLLQLPPLPAHAPPLRRVQSGLHASATDRLEWLMLSRRSISDLHVA 120
           PL+PHHQL PK LYFLL LPPLP    PL RV+S L +SA+DRLE LMLSRRS+SDL   
Sbjct: 61  PLDPHHQLKPKTLYFLLHLPPLPGSHRPLSRVRSDLCSSASDRLECLMLSRRSLSDLQSF 120

Query: 121 R--PPEPSAA-----PLQVKFRLPTAEMDRLLNECEDKAEVAQRILNLYGRDTDRFRGGQ 180
           R  P   S A     P+Q+K R+P  E +RL+ E + K E A+RI++L+           
Sbjct: 121 RLDPDGMSTASRPTGPVQIKLRVPREEFERLMKESKSKVEAAERIVDLW----------- 180

Query: 181 GQLRSTAQASTCKAREKRVSFVQ 196
                T    + +AREKRVSFV+
Sbjct: 181 ----KTGGMCSGQAREKRVSFVK 188

[Close]

BLAST of Moc08g35940 vs. NCBI nr
Match: KAG6607003.1 (hypothetical protein SDJN03_00345, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 178.3 bits (451), Expect = 6.5e-41
Identity = 98/169 (57.99%), Postives = 121/169 (71.60%), Query Frame = 0


Query: 1   MGNAMGGGRRRKGRT-KVMKIDGETMKLATPITASEVLSQHPDHRLFESQSLRNLGLRAT 60
           MGNAMGGG RR  RT KVMKI+GET K+ TP TA +V + HP+H L++SQS+  LGLRA 
Sbjct: 1   MGNAMGGGSRRSKRTAKVMKINGETFKIRTPTTAFQVTTHHPNHLLYDSQSITQLGLRAK 60

Query: 61  PLEPHHQLHPKALYFLLQLPPLPAHAPPLRRVQSGLHASATDRLEWLMLSRRSISDLHVA 120
           PL+PHHQL PK LYFLL LPPLP    PL RV+S L +SA+DRLE LMLSRRS+SDL   
Sbjct: 61  PLDPHHQLKPKTLYFLLHLPPLPGSHRPLSRVRSDLCSSASDRLECLMLSRRSVSDLQSF 120

Query: 121 R--PPEPSAA-----PLQVKFRLPTAEMDRLLNECEDKAEVAQRILNLY 162
           R  P   S A     P+Q+K R+P  E +RL+ E + K E A+RI++L+
Sbjct: 121 RLDPDGMSTACRPTGPVQIKLRVPREEFERLMKESKSKVEAAERIVDLW 169

[Close]

BLAST of Moc08g35940 vs. ExPASy Swiss-Prot
Match: Q6NLC8 (Uncharacterized protein At1g66480 OS=Arabidopsis thaliana OX=3702 GN=At1g66480 PE=2 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 2.6e-32
Identity = 84/211 (39.81%), Postives = 126/211 (59.72%), Query Frame = 0


Query: 1   MGNAMGGGRRRKGRTKVMKIDGETMKLATPITASEVLSQHPDHRLFESQSLRNLGLRATP 60
           MGN++   R+   R KVMKIDGET ++ TP+TA EV + +P + L +SQ++++ G+R+ P
Sbjct: 1   MGNSITVKRK---RAKVMKIDGETFRIKTPVTAREVTADYPGYVLLDSQAVKHFGVRSKP 60

Query: 61  LEPHHQLHPKALYFLLQLPPLPAHAP--------PLRRVQSGLHASATDRLEWLMLSRRS 120
           LEP+  L PK  YFL++LP LP            P RRV SG+H  A +RL+ LMLSRR+
Sbjct: 61  LEPNQTLKPKKTYFLVELPKLPPETTAVDTENKLPYRRVMSGIHVGAKERLDMLMLSRRT 120

Query: 121 ISDLHVARP-------PEPSAAPLQVKFRLPTAEMDRLLNE-CEDKAEVAQRILNLYGRD 180
           +SD+ + R        PE       V+ RLP +++ +L+ E   D + +A++IL +Y   
Sbjct: 121 VSDVTIGRSDGGDGFGPELGPGHTSVRLRLPRSQITKLMEENNNDASAIAEKILGIYMER 180

Query: 181 TDRFRGGQGQL--RSTAQASTCKAREKRVSF 194
           +    GG+G +  R    +   KAREK+VSF
Sbjct: 181 SGELGGGRGGVDGRRELGSGEIKAREKQVSF 208

[Close]

BLAST of Moc08g35940 vs. ExPASy TrEMBL
Match: A0A6J1CQP3 (uncharacterized protein At1g66480-like OS=Momordica charantia OX=3673 GN=LOC111013306 PE=4 SV=1)

HSP 1 Score: 400.2 bits (1027), Expect = 5.1e-108
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   MGNAMGGGRRRKGRTKVMKIDGETMKLATPITASEVLSQHPDHRLFESQSLRNLGLRATP 60
           MGNAMGGGRRRKGRTKVMKIDGETMKLATPITASEVLSQHPDHRLFESQSLRNLGLRATP
Sbjct: 1   MGNAMGGGRRRKGRTKVMKIDGETMKLATPITASEVLSQHPDHRLFESQSLRNLGLRATP 60

Query: 61  LEPHHQLHPKALYFLLQLPPLPAHAPPLRRVQSGLHASATDRLEWLMLSRRSISDLHVAR 120
           LEPHHQLHPKALYFLLQLPPLPAHAPPLRRVQSGLHASATDRLEWLMLSRRSISDLHVAR
Sbjct: 61  LEPHHQLHPKALYFLLQLPPLPAHAPPLRRVQSGLHASATDRLEWLMLSRRSISDLHVAR 120

Query: 121 PPEPSAAPLQVKFRLPTAEMDRLLNECEDKAEVAQRILNLYGRDTDRFRGGQGQLRSTAQ 180
           PPEPSAAPLQVKFRLPTAEMDRLLNECEDKAEVAQRILNLYGRDTDRFRGGQGQLRSTAQ
Sbjct: 121 PPEPSAAPLQVKFRLPTAEMDRLLNECEDKAEVAQRILNLYGRDTDRFRGGQGQLRSTAQ 180

Query: 181 ASTCKAREKRVSFVQMKDSPTQ 203
           ASTCKAREKRVSFVQMKDSPTQ
Sbjct: 181 ASTCKAREKRVSFVQMKDSPTQ 202

[Close]

BLAST of Moc08g35940 vs. ExPASy TrEMBL
Match: A0A6J1G9F9 (uncharacterized protein At1g66480-like OS=Cucurbita moschata OX=3662 GN=LOC111452165 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 5.7e-43
Identity = 108/203 (53.20%), Postives = 134/203 (66.01%), Query Frame = 0


Query: 1   MGNAMGGGRRRKGRT-KVMKIDGETMKLATPITASEVLSQHPDHRLFESQSLRNLGLRAT 60
           MGNAMGGG RR  RT KVMKI+GET K+ TP TA +V + HP+H L++SQS+  LGLRA 
Sbjct: 1   MGNAMGGGSRRSKRTAKVMKINGETFKIRTPTTAFQVTTHHPNHLLYDSQSITQLGLRAK 60

Query: 61  PLEPHHQLHPKALYFLLQLPPLPAHAPPLRRVQSGLHASATDRLEWLMLSRRSISDLHVA 120
           PL+PHHQL PK LYFLL LPPLP    PL RV+S L +SA+DRLE LMLSRRS+SDL   
Sbjct: 61  PLDPHHQLKPKTLYFLLHLPPLPGSHRPLSRVRSDLCSSASDRLECLMLSRRSVSDLQSF 120

Query: 121 R--PPEPSAA-----PLQVKFRLPTAEMDRLLNECEDKAEVAQRILNLYGRDTDRFRGGQ 180
           R  P   S A     P+Q+K R+P  E +RL+ E + K E A+RI++L+           
Sbjct: 121 RLDPDGMSTACRPTGPVQIKLRVPREEFERLMKESKSKVEAAERIVDLW----------- 180

Query: 181 GQLRSTAQASTCKAREKRVSFVQ 196
                T    + +AREKRVSFV+
Sbjct: 181 ----KTGGMCSGQAREKRVSFVK 188

[Close]

BLAST of Moc08g35940 vs. ExPASy TrEMBL
Match: A0A6J1K9N3 (uncharacterized protein At1g66480-like OS=Cucurbita maxima OX=3661 GN=LOC111492930 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 4.9e-42
Identity = 107/203 (52.71%), Postives = 133/203 (65.52%), Query Frame = 0


Query: 1   MGNAMGGGRRRKGRT-KVMKIDGETMKLATPITASEVLSQHPDHRLFESQSLRNLGLRAT 60
           MGNAMG G RR  RT KVMKI+GET K+ TP TA +V + HP+H L++SQS+  LGLRA 
Sbjct: 1   MGNAMGRGSRRSKRTAKVMKINGETFKIRTPTTAFQVTTHHPNHLLYDSQSINQLGLRAK 60

Query: 61  PLEPHHQLHPKALYFLLQLPPLPAHAPPLRRVQSGLHASATDRLEWLMLSRRSISDLHVA 120
           PL+PHHQL PK LYFLL LPPLP    PL RV+S L +SA+DRLE LMLSRRS+SDL   
Sbjct: 61  PLDPHHQLKPKTLYFLLHLPPLPGSHRPLSRVRSDLCSSASDRLECLMLSRRSLSDLQSF 120

Query: 121 R--PPEPSAA-----PLQVKFRLPTAEMDRLLNECEDKAEVAQRILNLYGRDTDRFRGGQ 180
           R  P   S A     P+Q+K R+P  E +RL+ E + K E A+RI++L+           
Sbjct: 121 RLDPDGMSTASRPTGPVQIKLRVPREEFERLMKESKSKVEAAERIVDLW----------- 180

Query: 181 GQLRSTAQASTCKAREKRVSFVQ 196
                T    + +AREKRVSFV+
Sbjct: 181 ----KTGGMCSGQAREKRVSFVK 188

[Close]

BLAST of Moc08g35940 vs. ExPASy TrEMBL
Match: A0A5B7ATV3 (Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_029601 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 5.9e-40
Identity = 92/184 (50.00%), Postives = 125/184 (67.93%), Query Frame = 0


Query: 1   MGNAMGGGRRRKGRTKVMKIDGETMKLATPITASEVLSQHPDHRLFESQSLRNLGLRATP 60
           MGN++GGGRR   + KVMKI+GET KL TPI   +V+  +P H L ES++++  G+RA P
Sbjct: 1   MGNSIGGGRR---KAKVMKINGETFKLKTPIRVGDVVDDYPGHVLLESEAVKRFGIRAKP 60

Query: 61  LEPHHQLHPKALYFLLQLPPLPAHAPPLRRVQSGLHASATDRLEWLMLSRRSISDLHVAR 120
           LEP  +L PK +YFLL+LP LP    P RRV+SG+H SA DRLE LMLSRRS+SDL + R
Sbjct: 61  LEPQQELKPKKIYFLLELPNLPEEKAPCRRVRSGVHMSAKDRLECLMLSRRSVSDLGIVR 120

Query: 121 PPEPSA--APLQVKFRLPTAEMDRLLNECEDKAEVAQRILNLYGRDTDRFRGGQGQLRST 180
           P   S    P+QVK RLP A++ +L+ E  D+AEVA++I+ LY  +       + +  + 
Sbjct: 121 PTTMSGGPGPVQVKMRLPKAQVAKLVEESRDEAEVAEKIVGLYMENAGEVSMAEAEAEAE 180

Query: 181 AQAS 183
           A+AS
Sbjct: 181 AEAS 181

[Close]

BLAST of Moc08g35940 vs. ExPASy TrEMBL
Match: A0A0A0L7W0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G368690 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 3.9e-39
Identity = 99/181 (54.70%), Postives = 122/181 (67.40%), Query Frame = 0


Query: 1   MGNAMGGGRRRKGR-TKVMKIDGETMKLATPITASEVLSQHPDHRLFESQSLRNLGLRAT 60
           MGNA+G G RRK R TKVMKI+GET+K+  P TA EV S +P H L+ES+SL+  GLRA 
Sbjct: 1   MGNAIGRGSRRKKRTTKVMKINGETIKITLPTTAYEVTSHYPSHLLYESKSLKLFGLRAK 60

Query: 61  PLEPHHQLHPKALYFLLQLPPLPAHAPPLRRVQSGLH-ASATDRLEWLMLSRRSISDLHV 120
           PL+PH  L PK LYFLLQLP LP     LRR  S LH  SA+DRLE L+LSRRS+SDL  
Sbjct: 61  PLDPHCHLEPKTLYFLLQLPTLPRDHCSLRRTCSDLHNLSASDRLECLLLSRRSLSDLQT 120

Query: 121 AR-------PPEPSAAPLQVKFRLPTAEMDRLLNECEDKAEVAQRILNLYGRDTDRFRGG 173
            R         + +A P+QVKF+LP AE +RL+ EC++K EV +RI++   R  D   G 
Sbjct: 121 LRFDPQRSSTDDGAAKPVQVKFQLPRAEFERLMKECKNKVEVTKRIVDYCARSRDNVYGN 180

[Close]

BLAST of Moc08g35940 vs. TAIR 10
Match: AT2G01340.1 (Encodes a protein whose expression is responsive to nematode infection. )

HSP 1 Score: 142.5 bits (358), Expect = 3.7e-34
Identity = 93/211 (44.08%), Postives = 127/211 (60.19%), Query Frame = 0


Query: 1   MGNAMGGGRRRKGRTKVMKIDGETMKLATPITASEVLSQHPDHRLFESQSLRNLGLRATP 60
           MGN++GG    K  TKVMKIDGET KL TP+TA EVL   P H L +S+S+++ G RA P
Sbjct: 1   MGNSLGG----KKTTKVMKIDGETFKLKTPVTAEEVLKDFPGHVLLDSESVKHYGARAKP 60

Query: 61  LEPHHQLHPKALYFLLQLPPLPAHAPPLRRVQSGLHASATDRLEWLMLSRRSISDLHVAR 120
           LE   +L  K LYF+++    P    P RRV+SG+H SA +RLE LML+RRS SDL + +
Sbjct: 61  LEAKQRLEAKRLYFVVE----PVKECPPRRVRSGIHVSAKERLESLMLARRSSSDLSILK 120

Query: 121 PP------EPSAAPLQVKFRLPTAEMDRLLNECEDKAEVAQRILNLY---GRDTDRF--- 180
           PP      E   A  +VK R+P AE+++L+ E   +AE  Q+I  L+    R  + +   
Sbjct: 121 PPGGWTTEEEEGAVRRVKVRIPKAELEKLVKEGATEAEATQKIAALFMAKQRQEEAYQNT 180

Query: 181 RGGQGQLRSTAQAST-----CKAREKRVSFV 195
           R  +    +TA A+T      K+R KRVSF+
Sbjct: 181 RQDEPATTATATATTTATRGVKSRLKRVSFM 203

[Close]

BLAST of Moc08g35940 vs. TAIR 10
Match: AT1G66480.1 (plastid movement impaired 2 )

HSP 1 Score: 140.2 bits (352), Expect = 1.8e-33
Identity = 84/211 (39.81%), Postives = 126/211 (59.72%), Query Frame = 0


Query: 1   MGNAMGGGRRRKGRTKVMKIDGETMKLATPITASEVLSQHPDHRLFESQSLRNLGLRATP 60
           MGN++   R+   R KVMKIDGET ++ TP+TA EV + +P + L +SQ++++ G+R+ P
Sbjct: 1   MGNSITVKRK---RAKVMKIDGETFRIKTPVTAREVTADYPGYVLLDSQAVKHFGVRSKP 60

Query: 61  LEPHHQLHPKALYFLLQLPPLPAHAP--------PLRRVQSGLHASATDRLEWLMLSRRS 120
           LEP+  L PK  YFL++LP LP            P RRV SG+H  A +RL+ LMLSRR+
Sbjct: 61  LEPNQTLKPKKTYFLVELPKLPPETTAVDTENKLPYRRVMSGIHVGAKERLDMLMLSRRT 120

Query: 121 ISDLHVARP-------PEPSAAPLQVKFRLPTAEMDRLLNE-CEDKAEVAQRILNLYGRD 180
           +SD+ + R        PE       V+ RLP +++ +L+ E   D + +A++IL +Y   
Sbjct: 121 VSDVTIGRSDGGDGFGPELGPGHTSVRLRLPRSQITKLMEENNNDASAIAEKILGIYMER 180

Query: 181 TDRFRGGQGQL--RSTAQASTCKAREKRVSF 194
           +    GG+G +  R    +   KAREK+VSF
Sbjct: 181 SGELGGGRGGVDGRRELGSGEIKAREKQVSF 208

[Close]

BLAST of Moc08g35940 vs. TAIR 10
Match: AT5G37840.1 (BEST Arabidopsis thaliana protein match is: plastid movement impaired 2 (TAIR:AT1G66480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 132.1 bits (331), Expect = 5.0e-31
Identity = 79/197 (40.10%), Postives = 119/197 (60.41%), Query Frame = 0


Query: 11  RKGRTKVMKIDGETMKLATPITASEVLSQHPDHRLFESQSLRNLGLRATPLEPHHQLHPK 70
           R+ + KVMKIDG+  +L TP+TAS+   ++P   L +S++++ LG+RA PLEP+  L P 
Sbjct: 8   RRNKVKVMKIDGDIFRLKTPVTASDATKEYPGFVLLDSETVKRLGVRAKPLEPNQILKPN 67

Query: 71  ALYFLLQLPPL-PAHAPPLRRVQSG-LHASATDRLEWLMLSRRSISDLHVARP----PEP 130
             YFL+ LPP+   +  P RRV SG +H  A +RLE LMLSRR++SD+  AR       P
Sbjct: 68  HTYFLVDLPPVDKRNKLPYRRVMSGNIHVGAKERLEMLMLSRRTVSDVGAARSDVVGDGP 127

Query: 131 SAAPLQVKFRLPTAEMDRLLNECEDKAEVAQRILNLYGRDTDRFRGGQG-----QLRSTA 190
                +V+ RLP +++ +L+ E  D +EVA +I++ Y   +   +GG+      Q    A
Sbjct: 128 ELGHTRVRLRLPRSQITKLMEESHDASEVAAKIISAYMESSGGIQGGRDNDGLRQRLGIA 187

Query: 191 QAST-CKAREKRVSFVQ 196
           + +   KAREK VSF +
Sbjct: 188 EINNHYKAREKHVSFAE 204

[Close]

BLAST of Moc08g35940 vs. TAIR 10
Match: AT1G71015.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G01340.1); Has 85 Blast hits to 85 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 109.0 bits (271), Expect = 4.5e-24
Identity = 65/164 (39.63%), Postives = 95/164 (57.93%), Query Frame = 0


Query: 1   MGNAMGGGRRRKGRTKVMKIDGETMKLATPITASEVLSQHPDHRLFESQSLRNLGLRATP 60
           MGN++G     K    +M I+GE+ KL TP+ A  V+   P H L ES++++ LG+RA P
Sbjct: 1   MGNSLG----TKKTATIMNINGESFKLKTPVEAGTVVKDFPGHVLLESEAVKRLGIRAKP 60

Query: 61  LEPHHQLHPKALYFLLQLPPLPAHAPPLRRVQSGLHASATDRLEWLMLSRRSISDLHVAR 120
           LEPH  L  K +YF+++LP       P RRV+SG+  SA +RLE L LSRRS SDL V +
Sbjct: 61  LEPHQNLESKRIYFMVELPRTWKERTP-RRVRSGIQMSAKERLENLKLSRRSSSDLSVMK 120

Query: 121 PP----EPSAAPLQVKFRLPTAEMDRLLNECEDKAEVAQRILNL 161
                 +       VK +LP  ++++L  E E  ++ + +I  L
Sbjct: 121 KKTEVNDEEREVSSVKLKLPKWKIEKLRKESESGSDFSNKITQL 159

The following BLAST results are available for this feature:

BLAST of Moc08g35940 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022143428.1	1.1e-107	100.00	uncharacterized protein At1g66480-like [Momordica charantia]	[more]
XP_038887072.1	5.3e-43	51.96	uncharacterized protein At1g66480-like [Benincasa hispida]	[more]
XP_022948507.1	1.2e-42	53.20	uncharacterized protein At1g66480-like [Cucurbita moschata]	[more]
XP_022998216.1	1.0e-41	52.71	uncharacterized protein At1g66480-like [Cucurbita maxima]	[more]
KAG6607003.1	6.5e-41	57.99	hypothetical protein SDJN03_00345, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Moc08g35940 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NLC8	2.6e-32	39.81	Uncharacterized protein At1g66480 OS=Arabidopsis thaliana OX=3702 GN=At1g66480 P...	[more]

BLAST of Moc08g35940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CQP3	5.1e-108	100.00	uncharacterized protein At1g66480-like OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6J1G9F9	5.7e-43	53.20	uncharacterized protein At1g66480-like OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]
A0A6J1K9N3	4.9e-42	52.71	uncharacterized protein At1g66480-like OS=Cucurbita maxima OX=3661 GN=LOC1114929...	[more]
A0A5B7ATV3	5.9e-40	50.00	Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_029601 PE=4 SV=1	[more]
A0A0A0L7W0	3.9e-39	54.70	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G368690 PE=4 SV=1	[more]

BLAST of Moc08g35940 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G01340.1	3.7e-34	44.08	Encodes a protein whose expression is responsive to nematode infection.	[more]
AT1G66480.1	1.8e-33	39.81	plastid movement impaired 2	[more]
AT5G37840.1	5.0e-31	40.10	BEST Arabidopsis thaliana protein match is: plastid movement impaired 2 (TAIR:AT...	[more]
AT1G71015.1	4.5e-24	39.63	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 1..112 e-value: 9.4E-19 score: 68.5
None	No IPR available	PANTHER	PTHR33148:SF3	PLASTID MOVEMENT IMPAIRED PROTEIN	coord: 1..198
None	No IPR available	PANTHER	PTHR33148	PLASTID MOVEMENT IMPAIRED PROTEIN-RELATED	coord: 1..198

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc08g35940.1	Moc08g35940.1	mRNA