Moc08g35620 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc08g35620
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Locationchr8: 26190605 .. 26190883 (+)
RNA-Seq ExpressionMoc08g35620
SyntenyMoc08g35620
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGGCATTGCTTCCGACATGCCTGACCTTCAGATCGATCTCGGTGGTCAGAAGAAGAGGTATGTTGAGCAGTGGGCGTCTGGGCCTAGCGGCACCCTGGCCCCCAAGCATTGGTGGATAAGTACGTCAGAGATCTGGACTCTGACTACTCCGACCTCGAAGAGGATCAGGTCGGCACCACTCAAGAGGGCGCTCCTCAAGCAGGCTCTTAGGCGACCACCCTTCAAGAGGCTTTTCGCTGTCTTTCTTCTCTTCTCTTTTGTTTTTTGTTTGTAA

mRNA sequence

ATGAAGGGCATTGCTTCCGACATGCCTGACCTTCAGATCGATCTCGGTGGTCAGAAGAAGAGGTATGTTGAGCAGTGGGCGTCTGGGCCTAGCGGCACCCTGGCCCCCAAGCATTGGTGGATAAGTACGTCAGAGATCTGGACTCTGACTACTCCGACCTCGAAGAGGATCAGGTCGGCACCACTCAAGAGGGCGCTCCTCAAGCAGGCTCTTAGGCGACCACCCTTCAAGAGGCTTTTCGCTGTCTTTCTTCTCTTCTCTTTTGTTTTTTGTTTGTAA

Coding sequence (CDS)

ATGAAGGGCATTGCTTCCGACATGCCTGACCTTCAGATCGATCTCGGTGGTCAGAAGAAGAGGTATGTTGAGCAGTGGGCGTCTGGGCCTAGCGGCACCCTGGCCCCCAAGCATTGGTGGATAAGTACGTCAGAGATCTGGACTCTGACTACTCCGACCTCGAAGAGGATCAGGTCGGCACCACTCAAGAGGGCGCTCCTCAAGCAGGCTCTTAGGCGACCACCCTTCAAGAGGCTTTTCGCTGTCTTTCTTCTCTTCTCTTTTGTTTTTTGTTTGTAA

Protein sequence

MKGIASDMPDLQIDLGGQKKRYVEQWASGPSGTLAPKHWWISTSEIWTLTTPTSKRIRSAPLKRALLKQALRRPPFKRLFAVFLLFSFVFCL
Homology
BLAST of Moc08g35620 vs. NCBI nr
Match: XP_022150343.1 (uncharacterized protein LOC111018538 [Momordica charantia])

HSP 1 Score: 64.3 bits (155), Expect = 6.2e-07
Identity = 28/37 (75.68%), Postives = 31/37 (83.78%), Query Frame = 0

Query: 1   MKGIASDMPDLQIDLGGQKKRYVEQWASGPSGTLAPK 38
           MKGIASDMPDLQIDL G K+RY E+WASGP GT  P+
Sbjct: 230 MKGIASDMPDLQIDLSGLKRRYAEKWASGPGGTPGPQ 266

BLAST of Moc08g35620 vs. NCBI nr
Match: XP_022159252.1 (uncharacterized protein LOC111025665 [Momordica charantia])

HSP 1 Score: 59.3 bits (142), Expect = 2.0e-05
Identity = 26/37 (70.27%), Postives = 31/37 (83.78%), Query Frame = 0

Query: 1   MKGIASDMPDLQIDLGGQKKRYVEQWASGPSGTLAPK 38
           MKGIA+DMP LQIDL G KK+Y E+WASGP+GT  P+
Sbjct: 454 MKGIAADMPHLQIDLNGLKKKYSEKWASGPNGTPDPQ 490

BLAST of Moc08g35620 vs. NCBI nr
Match: XP_022142326.1 (uncharacterized protein LOC111012467 [Momordica charantia])

HSP 1 Score: 58.5 bits (140), Expect = 3.4e-05
Identity = 24/36 (66.67%), Postives = 30/36 (83.33%), Query Frame = 0

Query: 1   MKGIASDMPDLQIDLGGQKKRYVEQWASGPSGTLAP 37
           MKGIA+D+P L++DLG  KKRY E+WASGP+GT  P
Sbjct: 464 MKGIAADVPHLEVDLGDLKKRYAEKWASGPNGTSGP 499

BLAST of Moc08g35620 vs. NCBI nr
Match: XP_022147182.1 (uncharacterized protein LOC111016193 [Momordica charantia])

HSP 1 Score: 58.2 bits (139), Expect = 4.5e-05
Identity = 26/37 (70.27%), Postives = 29/37 (78.38%), Query Frame = 0

Query: 1   MKGIASDMPDLQIDLGGQKKRYVEQWASGPSGTLAPK 38
           MKGIA+DMP LQIDL   KKRY E WASGP+GT  P+
Sbjct: 208 MKGIAADMPHLQIDLSDLKKRYSENWASGPNGTPGPQ 244

BLAST of Moc08g35620 vs. NCBI nr
Match: XP_022152119.1 (uncharacterized protein LOC111019909 [Momordica charantia])

HSP 1 Score: 57.8 bits (138), Expect = 5.8e-05
Identity = 25/37 (67.57%), Postives = 30/37 (81.08%), Query Frame = 0

Query: 1   MKGIASDMPDLQIDLGGQKKRYVEQWASGPSGTLAPK 38
           MKGIA+DMP LQIDL   KK+Y E+WASGP+GT  P+
Sbjct: 216 MKGIAADMPHLQIDLSNLKKKYSEKWASGPNGTPGPQ 252

BLAST of Moc08g35620 vs. ExPASy TrEMBL
Match: A0A6J1D971 (uncharacterized protein LOC111018538 OS=Momordica charantia OX=3673 GN=LOC111018538 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 3.0e-07
Identity = 28/37 (75.68%), Postives = 31/37 (83.78%), Query Frame = 0

Query: 1   MKGIASDMPDLQIDLGGQKKRYVEQWASGPSGTLAPK 38
           MKGIASDMPDLQIDL G K+RY E+WASGP GT  P+
Sbjct: 230 MKGIASDMPDLQIDLSGLKRRYAEKWASGPGGTPGPQ 266

BLAST of Moc08g35620 vs. ExPASy TrEMBL
Match: A0A6J1DZB3 (uncharacterized protein LOC111025665 OS=Momordica charantia OX=3673 GN=LOC111025665 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 9.7e-06
Identity = 26/37 (70.27%), Postives = 31/37 (83.78%), Query Frame = 0

Query: 1   MKGIASDMPDLQIDLGGQKKRYVEQWASGPSGTLAPK 38
           MKGIA+DMP LQIDL G KK+Y E+WASGP+GT  P+
Sbjct: 454 MKGIAADMPHLQIDLNGLKKKYSEKWASGPNGTPDPQ 490

BLAST of Moc08g35620 vs. ExPASy TrEMBL
Match: A0A6J1CLV1 (uncharacterized protein LOC111012467 OS=Momordica charantia OX=3673 GN=LOC111012467 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.7e-05
Identity = 24/36 (66.67%), Postives = 30/36 (83.33%), Query Frame = 0

Query: 1   MKGIASDMPDLQIDLGGQKKRYVEQWASGPSGTLAP 37
           MKGIA+D+P L++DLG  KKRY E+WASGP+GT  P
Sbjct: 464 MKGIAADVPHLEVDLGDLKKRYAEKWASGPNGTSGP 499

BLAST of Moc08g35620 vs. ExPASy TrEMBL
Match: A0A6J1D1N9 (uncharacterized protein LOC111016193 OS=Momordica charantia OX=3673 GN=LOC111016193 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 2.2e-05
Identity = 26/37 (70.27%), Postives = 29/37 (78.38%), Query Frame = 0

Query: 1   MKGIASDMPDLQIDLGGQKKRYVEQWASGPSGTLAPK 38
           MKGIA+DMP LQIDL   KKRY E WASGP+GT  P+
Sbjct: 208 MKGIAADMPHLQIDLSDLKKRYSENWASGPNGTPGPQ 244

BLAST of Moc08g35620 vs. ExPASy TrEMBL
Match: A0A6J1DF31 (uncharacterized protein LOC111019909 OS=Momordica charantia OX=3673 GN=LOC111019909 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 2.8e-05
Identity = 25/37 (67.57%), Postives = 30/37 (81.08%), Query Frame = 0

Query: 1   MKGIASDMPDLQIDLGGQKKRYVEQWASGPSGTLAPK 38
           MKGIA+DMP LQIDL   KK+Y E+WASGP+GT  P+
Sbjct: 216 MKGIAADMPHLQIDLSNLKKKYSEKWASGPNGTPGPQ 252

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022150343.16.2e-0775.68uncharacterized protein LOC111018538 [Momordica charantia][more]
XP_022159252.12.0e-0570.27uncharacterized protein LOC111025665 [Momordica charantia][more]
XP_022142326.13.4e-0566.67uncharacterized protein LOC111012467 [Momordica charantia][more]
XP_022147182.14.5e-0570.27uncharacterized protein LOC111016193 [Momordica charantia][more]
XP_022152119.15.8e-0567.57uncharacterized protein LOC111019909 [Momordica charantia][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1D9713.0e-0775.68uncharacterized protein LOC111018538 OS=Momordica charantia OX=3673 GN=LOC111018... [more]
A0A6J1DZB39.7e-0670.27uncharacterized protein LOC111025665 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A6J1CLV11.7e-0566.67uncharacterized protein LOC111012467 OS=Momordica charantia OX=3673 GN=LOC111012... [more]
A0A6J1D1N92.2e-0570.27uncharacterized protein LOC111016193 OS=Momordica charantia OX=3673 GN=LOC111016... [more]
A0A6J1DF312.8e-0567.57uncharacterized protein LOC111019909 OS=Momordica charantia OX=3673 GN=LOC111019... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc08g35620.1Moc08g35620.1mRNA