Moc08g35060 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc08g35060
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	mitochondrial zinc maintenance protein 1, mitochondrial
Location	chr8: 25644807 .. 25645729 (-)
RNA-Seq Expression	Moc08g35060
Synteny	Moc08g35060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAGGAGAAGTTCTAAGCGCGTACAGAGCATTGCTCAGGGCAACCCACAAGTCCTTCGCCGGCGACACTTTGATGCTGACGGAGTCCGCCGCCGAGGTCCGCCGGAAATTCGAAGAGAGCCGCCACGTGACCTCCGAGGCCGAGATTCGCAAACTGCTCGAAGAAGCTCGGGAGGCCTCCCATTTCATCTCCAATATGATCGTTCAGGCCAAGCTCACTTCTCGTGGCGGTTATGGTATTTTGCCCCGTTCTATTTTTCACGTTTTAATTCATTTTCGATAGACCCTACAACTAATCAACACTTGGCTAACGCATCGTGAATTTGAAATGGTAGCCTTGCAGCCCACCTGTTTGATAAAATGCTTCACCCGATTTCTTCCTCTTTTTATTTACTTTAATCAAGTGGGCCAGTAGAAAATACTCTGGAAACTACTGTGGAGTCTTCTGGGGATGTTCTGTTCATAATTTTAGTAGGTTTGGCATTGGAGATTGTGTAATCTGTGTTTTGTCTGATAAGAATGAATAAGTTATAGAGACTTAAATTTCTGTAATGGATAGTGTGTTTTGTCTGATGAGTGGGAGGTTGGAACTATTGACTTTTAAAAGAGGTTATCAATTTCTTTAACCAATTCAAATAATTTGGATGGCATCTTATTAACAAACTCATAAGTTGGGATAGATAAACTCATATCAAACATAGGTTTGATATCTAGACTTTGAATTATGCCATTCTAACTTGTGAATGGAATACCTTTTAAGCTTCTAACTGACATGTAAATGTGTTTGTTCTTCTTTATAAACGAAGTCTATGGAATCCGAATATGATTTATGGGTTTGCTGCAGAAATGAAGCCGAGTAAAGATCATGCTGGTGCAACGCTTGAAGTGCCTTCAGAAGAGCTTCTGCGCAAATCTGGATAA

mRNA sequence

ATGAGAGGAGAAGTTCTAAGCGCGTACAGAGCATTGCTCAGGGCAACCCACAAGTCCTTCGCCGGCGACACTTTGATGCTGACGGAGTCCGCCGCCGAGGTCCGCCGGAAATTCGAAGAGAGCCGCCACGTGACCTCCGAGGCCGAGATTCGCAAACTGCTCGAAGAAGCTCGGGAGGCCTCCCATTTCATCTCCAATATGATCGTTCAGGCCAAGCTCACTTCTCGTGGCGGTTATGAAATGAAGCCGAGTAAAGATCATGCTGGTGCAACGCTTGAAGTGCCTTCAGAAGAGCTTCTGCGCAAATCTGGATAA

Coding sequence (CDS)

ATGAGAGGAGAAGTTCTAAGCGCGTACAGAGCATTGCTCAGGGCAACCCACAAGTCCTTCGCCGGCGACACTTTGATGCTGACGGAGTCCGCCGCCGAGGTCCGCCGGAAATTCGAAGAGAGCCGCCACGTGACCTCCGAGGCCGAGATTCGCAAACTGCTCGAAGAAGCTCGGGAGGCCTCCCATTTCATCTCCAATATGATCGTTCAGGCCAAGCTCACTTCTCGTGGCGGTTATGAAATGAAGCCGAGTAAAGATCATGCTGGTGCAACGCTTGAAGTGCCTTCAGAAGAGCTTCTGCGCAAATCTGGATAA

Protein sequence

MRGEVLSAYRALLRATHKSFAGDTLMLTESAAEVRRKFEESRHVTSEAEIRKLLEEAREASHFISNMIVQAKLTSRGGYEMKPSKDHAGATLEVPSEELLRKSG

Homology

[Close]

BLAST of Moc08g35060 vs. NCBI nr
Match: XP_022155304.1 (mitochondrial zinc maintenance protein 1, mitochondrial [Momordica charantia])

HSP 1 Score: 196.4 bits (498), Expect = 1.2e-46
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0


Query: 1   MRGEVLSAYRALLRATHKSFAGDTLMLTESAAEVRRKFEESRHVTSEAEIRKLLEEAREA 60
           MRGEVLSAYRALLRATHKSFAGDTLMLTESAAEVRRKFEESRHVTSEAEIRKLLEEAREA
Sbjct: 1   MRGEVLSAYRALLRATHKSFAGDTLMLTESAAEVRRKFEESRHVTSEAEIRKLLEEAREA 60

Query: 61  SHFISNMIVQAKLTSRGGYEMKPSKDHAGATLEVPSEELLRKSG 105
           SHFISNMIVQAKLTSRGGYEMKPSKDHAGATLEVPSEELLRKSG
Sbjct: 61  SHFISNMIVQAKLTSRGGYEMKPSKDHAGATLEVPSEELLRKSG 104

[Close]

BLAST of Moc08g35060 vs. NCBI nr
Match: XP_038905396.1 (mitochondrial zinc maintenance protein 1, mitochondrial [Benincasa hispida])

HSP 1 Score: 188.3 bits (477), Expect = 3.2e-44
Identity = 100/103 (97.09%), Postives = 102/103 (99.03%), Query Frame = 0


Query: 1   MRGEVLSAYRALLRATHKSFAGDTLMLTESAAEVRRKFEESRHVTSEAEIRKLLEEAREA 60
           M+GEVLSAYRALLRAT KSFAGDTLMLTESA+EVRRKFEESRHVTSEAEIRKLLEEAREA
Sbjct: 1   MKGEVLSAYRALLRATKKSFAGDTLMLTESASEVRRKFEESRHVTSEAEIRKLLEEAREA 60

Query: 61  SHFISNMIVQAKLTSRGGYEMKPSKDHAGATLEVPSEELLRKS 104
           SHFISNMIVQAKLTSRGGYEMKPSKDHAGATLEVPSEELLRKS
Sbjct: 61  SHFISNMIVQAKLTSRGGYEMKPSKDHAGATLEVPSEELLRKS 103

[Close]

BLAST of Moc08g35060 vs. NCBI nr
Match: XP_008454342.1 (PREDICTED: mitochondrial zinc maintenance protein 1, mitochondrial [Cucumis melo])

HSP 1 Score: 183.3 bits (464), Expect = 1.0e-42
Identity = 96/103 (93.20%), Postives = 101/103 (98.06%), Query Frame = 0


Query: 1   MRGEVLSAYRALLRATHKSFAGDTLMLTESAAEVRRKFEESRHVTSEAEIRKLLEEAREA 60
           M+GEVLSAYR+LLRAT KSFAGDTLMLTESA+E+RRKF+ESRHVTSEAEIRKLLEEAREA
Sbjct: 1   MKGEVLSAYRSLLRATKKSFAGDTLMLTESASEIRRKFQESRHVTSEAEIRKLLEEAREA 60

Query: 61  SHFISNMIVQAKLTSRGGYEMKPSKDHAGATLEVPSEELLRKS 104
           SHFISNMIVQAK TSRGGYEMKPSKDHAGATLEVPSEELLRKS
Sbjct: 61  SHFISNMIVQAKRTSRGGYEMKPSKDHAGATLEVPSEELLRKS 103

[Close]

BLAST of Moc08g35060 vs. NCBI nr
Match: XP_004152250.1 (mitochondrial zinc maintenance protein 1, mitochondrial [Cucumis sativus] >KGN52811.1 hypothetical protein Csa_014848 [Cucumis sativus])

HSP 1 Score: 181.4 bits (459), Expect = 4.0e-42
Identity = 94/103 (91.26%), Postives = 101/103 (98.06%), Query Frame = 0


Query: 1   MRGEVLSAYRALLRATHKSFAGDTLMLTESAAEVRRKFEESRHVTSEAEIRKLLEEAREA 60
           M+GEVLSAYR+LLRAT +SFAGDTLMLTESA+E+RRKF+ESRHVTSE EIRKLLEEAREA
Sbjct: 1   MKGEVLSAYRSLLRATKRSFAGDTLMLTESASEIRRKFQESRHVTSEPEIRKLLEEAREA 60

Query: 61  SHFISNMIVQAKLTSRGGYEMKPSKDHAGATLEVPSEELLRKS 104
           SHFISNMIVQAKLTSRGGYEMKPSKDHAGATLEVP+EELLRKS
Sbjct: 61  SHFISNMIVQAKLTSRGGYEMKPSKDHAGATLEVPTEELLRKS 103

[Close]

BLAST of Moc08g35060 vs. NCBI nr
Match: KAG7036663.1 (MZM1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 181.0 bits (458), Expect = 5.2e-42
Identity = 96/103 (93.20%), Postives = 100/103 (97.09%), Query Frame = 0


Query: 1   MRGEVLSAYRALLRATHKSFAGDTLMLTESAAEVRRKFEESRHVTSEAEIRKLLEEAREA 60
           +RGEVLSAYRALLRAT KSFAGDTLML ESAAEVRRKFEESRHVTS+ EIRKLLEEAREA
Sbjct: 2   VRGEVLSAYRALLRATKKSFAGDTLMLKESAAEVRRKFEESRHVTSDPEIRKLLEEAREA 61

Query: 61  SHFISNMIVQAKLTSRGGYEMKPSKDHAGATLEVPSEELLRKS 104
           SHFISNMIVQAKLTSRGGYEMKPSK+HAGATLEVPSEELLR+S
Sbjct: 62  SHFISNMIVQAKLTSRGGYEMKPSKEHAGATLEVPSEELLRRS 104

[Close]

BLAST of Moc08g35060 vs. ExPASy TrEMBL
Match: A0A6J1DPV6 (mitochondrial zinc maintenance protein 1, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111022436 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 5.8e-47
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0


Query: 1   MRGEVLSAYRALLRATHKSFAGDTLMLTESAAEVRRKFEESRHVTSEAEIRKLLEEAREA 60
           MRGEVLSAYRALLRATHKSFAGDTLMLTESAAEVRRKFEESRHVTSEAEIRKLLEEAREA
Sbjct: 1   MRGEVLSAYRALLRATHKSFAGDTLMLTESAAEVRRKFEESRHVTSEAEIRKLLEEAREA 60

Query: 61  SHFISNMIVQAKLTSRGGYEMKPSKDHAGATLEVPSEELLRKSG 105
           SHFISNMIVQAKLTSRGGYEMKPSKDHAGATLEVPSEELLRKSG
Sbjct: 61  SHFISNMIVQAKLTSRGGYEMKPSKDHAGATLEVPSEELLRKSG 104

[Close]

BLAST of Moc08g35060 vs. ExPASy TrEMBL
Match: A0A1S3BYH1 (mitochondrial zinc maintenance protein 1, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103494771 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 5.0e-43
Identity = 96/103 (93.20%), Postives = 101/103 (98.06%), Query Frame = 0


Query: 1   MRGEVLSAYRALLRATHKSFAGDTLMLTESAAEVRRKFEESRHVTSEAEIRKLLEEAREA 60
           M+GEVLSAYR+LLRAT KSFAGDTLMLTESA+E+RRKF+ESRHVTSEAEIRKLLEEAREA
Sbjct: 1   MKGEVLSAYRSLLRATKKSFAGDTLMLTESASEIRRKFQESRHVTSEAEIRKLLEEAREA 60

Query: 61  SHFISNMIVQAKLTSRGGYEMKPSKDHAGATLEVPSEELLRKS 104
           SHFISNMIVQAK TSRGGYEMKPSKDHAGATLEVPSEELLRKS
Sbjct: 61  SHFISNMIVQAKRTSRGGYEMKPSKDHAGATLEVPSEELLRKS 103

[Close]

BLAST of Moc08g35060 vs. ExPASy TrEMBL
Match: A0A0A0KY80 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G001780 PE=4 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 1.9e-42
Identity = 94/103 (91.26%), Postives = 101/103 (98.06%), Query Frame = 0


Query: 1   MRGEVLSAYRALLRATHKSFAGDTLMLTESAAEVRRKFEESRHVTSEAEIRKLLEEAREA 60
           M+GEVLSAYR+LLRAT +SFAGDTLMLTESA+E+RRKF+ESRHVTSE EIRKLLEEAREA
Sbjct: 1   MKGEVLSAYRSLLRATKRSFAGDTLMLTESASEIRRKFQESRHVTSEPEIRKLLEEAREA 60

Query: 61  SHFISNMIVQAKLTSRGGYEMKPSKDHAGATLEVPSEELLRKS 104
           SHFISNMIVQAKLTSRGGYEMKPSKDHAGATLEVP+EELLRKS
Sbjct: 61  SHFISNMIVQAKLTSRGGYEMKPSKDHAGATLEVPTEELLRKS 103

[Close]

BLAST of Moc08g35060 vs. ExPASy TrEMBL
Match: A0A6J1GAU2 (mitochondrial zinc maintenance protein 1, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111452487 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 5.6e-42
Identity = 95/103 (92.23%), Postives = 100/103 (97.09%), Query Frame = 0


Query: 1   MRGEVLSAYRALLRATHKSFAGDTLMLTESAAEVRRKFEESRHVTSEAEIRKLLEEAREA 60
           ++GEVLSAYRALLRAT KSFAGDTLML ESAAEVRRKFEESRHVTS+ EIRKLLEEAREA
Sbjct: 2   VKGEVLSAYRALLRATKKSFAGDTLMLKESAAEVRRKFEESRHVTSDPEIRKLLEEAREA 61

Query: 61  SHFISNMIVQAKLTSRGGYEMKPSKDHAGATLEVPSEELLRKS 104
           SHFISNMIVQAKLTSRGGYEMKPSK+HAGATLEVPSEELLR+S
Sbjct: 62  SHFISNMIVQAKLTSRGGYEMKPSKEHAGATLEVPSEELLRRS 104

[Close]

BLAST of Moc08g35060 vs. ExPASy TrEMBL
Match: A0A6J1KH11 (mitochondrial zinc maintenance protein 1, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111493140 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 4.7e-41
Identity = 94/103 (91.26%), Postives = 99/103 (96.12%), Query Frame = 0


Query: 1   MRGEVLSAYRALLRATHKSFAGDTLMLTESAAEVRRKFEESRHVTSEAEIRKLLEEAREA 60
           ++GEVLSAYRALLRAT KSFAGDTLML ESAAEVRRKFEESRHVTS+ EIRKLLEEAREA
Sbjct: 2   VKGEVLSAYRALLRATKKSFAGDTLMLKESAAEVRRKFEESRHVTSDPEIRKLLEEAREA 61

Query: 61  SHFISNMIVQAKLTSRGGYEMKPSKDHAGATLEVPSEELLRKS 104
           SHFISNMIVQAKLTSRGGYEMK SK+HAGATLEVPSEELLR+S
Sbjct: 62  SHFISNMIVQAKLTSRGGYEMKASKEHAGATLEVPSEELLRRS 104

[Close]

BLAST of Moc08g35060 vs. TAIR 10
Match: AT3G62810.1 (complex 1 family protein / LVR family protein )

HSP 1 Score: 138.7 bits (348), Expect = 2.7e-33
Identity = 73/100 (73.00%), Postives = 85/100 (85.00%), Query Frame = 0


Query: 3   GEVLSAYRALLRATHKSFAGDTLMLTESAAEVRRKFEESRHVTSEAEIRKLLEEAREASH 62
           GE L AYRALLRAT KSFAGDT ML  SA+E+R+KFEE+R V S ++I +LLEEAREA+ 
Sbjct: 4   GEALIAYRALLRATKKSFAGDTEMLKASASEIRKKFEENRLVASNSDITRLLEEAREATQ 63

Query: 63  FISNMIVQAKLTSRGGYEMKPSKDHAGATLEVPSEELLRK 103
           FIS MIVQAKL  RGGYEMK S++HAGATLE+PSEE+LRK
Sbjct: 64  FISTMIVQAKLNERGGYEMKASQEHAGATLELPSEEMLRK 103

The following BLAST results are available for this feature:

BLAST of Moc08g35060 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022155304.1	1.2e-46	100.00	mitochondrial zinc maintenance protein 1, mitochondrial [Momordica charantia]	[more]
XP_038905396.1	3.2e-44	97.09	mitochondrial zinc maintenance protein 1, mitochondrial [Benincasa hispida]	[more]
XP_008454342.1	1.0e-42	93.20	PREDICTED: mitochondrial zinc maintenance protein 1, mitochondrial [Cucumis melo...	[more]
XP_004152250.1	4.0e-42	91.26	mitochondrial zinc maintenance protein 1, mitochondrial [Cucumis sativus] >KGN52...	[more]
KAG7036663.1	5.2e-42	93.20	MZM1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Moc08g35060 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc08g35060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DPV6	5.8e-47	100.00	mitochondrial zinc maintenance protein 1, mitochondrial OS=Momordica charantia O...	[more]
A0A1S3BYH1	5.0e-43	93.20	mitochondrial zinc maintenance protein 1, mitochondrial OS=Cucumis melo OX=3656 ...	[more]
A0A0A0KY80	1.9e-42	91.26	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G001780 PE=4 SV=1	[more]
A0A6J1GAU2	5.6e-42	92.23	mitochondrial zinc maintenance protein 1, mitochondrial OS=Cucurbita moschata OX...	[more]
A0A6J1KH11	4.7e-41	91.26	mitochondrial zinc maintenance protein 1, mitochondrial OS=Cucurbita maxima OX=3...	[more]

BLAST of Moc08g35060 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G62810.1	2.7e-33	73.00	complex 1 family protein / LVR family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008011	Complex 1 LYR protein	PFAM	PF05347	Complex1_LYR	coord: 4..60 e-value: 3.4E-13 score: 49.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 79..104
None	No IPR available	PANTHER	PTHR46749	COMPLEX III ASSEMBLY FACTOR LYRM7	coord: 2..103
None	No IPR available	CDD	cd20267	Complex1_LYR_LYRM7	coord: 5..76 e-value: 2.99557E-25 score: 88.0043

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc08g35060.1	Moc08g35060.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0004386	helicase activity