Moc08g33540 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc08g33540
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Locationchr8: 24359030 .. 24362902 (-)
RNA-Seq ExpressionMoc08g33540
SyntenyMoc08g33540
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAAGCCGAGAGTCGAATTCCACTTGGAGATGCAGAAAACCCAAGGAAGATGCCAATCACATGCCTTCTAAAATGGCCCTGATTTCCGCTAACAGAGGGGAAGGGGAAAAGAAAGAACTTGGGATTTCGCTGCCAAAAGACTACCACTGTGGTCACGCAGAAGCATCCCCAATCCAGTTTGTGAAGACCGACAGGCTCCATCCACATTTAACTTCGTGAAATTGGCAAGTGGGGCGCTCCACGAAGGAGAAACACCCGAAGTAGTAGCCGGAGATGGGGAGATTGAAGGATAAGTGGTCGCTCGTCTGAAATTCTCAAGGTAAGAAGTGATCCAATTGCATCGAAAGTCAAGATCCAGAAGGAGATGACCGTGAAAATCAGAATTTCTATCAGACCAAATTGCCCAACAGGTAAACGTCGCGAGGTTCATTTCATCTCCAGTAAAAAATGCAAAGTTATGTCTTCCCAAATTTCTGAAAACGTCTATGTTGGACAGCTGGGAAACAAATCGAAAGGAAGATCGTGCTCCAAATTTTCCGAGCTCGCTTGTAGAAGAAAATGGAGTGGGCTATTGTTTCCGGCTTGGATGAGCAACAGCAAAAAGGTACTACTTCTAAACCTCTGGAGTGCAAAATAGCCATTGAAGACAAATGTTCATGAAAAGCTTTCCACATGAAATTCTTTATTTTTGATGGAATATTTAACTTCCAAATTTCCTGCCATGAAGAACCCCATCTGCTATTGCTTGTAGAGAGCATATCACACTTTAAGTTCATAAAAAGCTTGTAGCCACTTTTAACACTATATGTCCCCGCTTATCGTAGTGGCAAAGCCAAGAATCATTAGAATTATAATTGCAAATAGGAATGGTCAAAATAAGATCACAGTCTTCTGGGCTGAAAGAAGTAGATACTCTTTGTGAATCCCAAACTCCATTAGGGAGAATATAATCTGCCACTCTGCTGCCCAAAGATGAAGGATGAGCGGGATGAGGCCAAAAATTCAAGGACTTGGAAATCCATGGTCGTTATAGGCATCAATAGTTAATCCATTTCCAATTCTCATATGAAAGTCTTTAACTTGTAGATCCTTTCCCCATAGAAAACTCTTCCATGAGTAGGAGGATTTTGTAAGAAATTTGAAAGTTTTTAAGATTGGAATTTATACACTAAAGTCTCATAATTAGTAAATATTTTATTATTTATTAAAAAATAATTATTTTTGATCATTTGGATGGTATGCAATGTTTCATTATCTATTTTGTGAAGTTCAAGTTTATAAAAGTTCAAGTTTATAAAAGTAATCTTTGAACTTTATGTAATTTTTTTTAGTATATGTGAGGGTGTGAATTCGAACTCATGACATTTTGATCAGAAATGAGTATTTTAACCAATTGGGCTATACTCAGGTTCACTTGAATAGTATGTAGTTAATATAAGTGGATCATGTTCAAGAAGTATAATAACATAGATAAGTATCTTATTAACATTGTTGATACAACTCACTTTCTAAAAGTTACAAATCATTTATTAGCAATCATGTGGAGAGGATATACGAGCGGGGTATCATATACCACAAAGTTTGTATATGACTAAACCAAGATATATTTAATCTTTCTTTATAAATTCATTAAAAAAAAGATATAAATATATATTTCACACAATGATCGTGTGCGACTCAATCTTAATCATGAGTGAGTAATAATAAACCTCTACATGTGAAAGTATGTCATGTAAATCGTGAGAATGATTTTTTTAACCTATTCAATAAGCTTACTATTTTTGAGATATGACCAAATAAGAAACTGGAAAACATAATCTCATAAAATTTTCTCCTTCCTATATAATGTAAGTAAGATGAGTAATTCGCTTAAGTGTTAATTTCAGGAATTGAACAATGGAGCACCACCTTTTCACTAGTTTCGAGATGGACTTAGCGTTTATGATTGGATTATAAAAATATTTTTCATTAGACACTACTACGAAATTGAGCTTTCATGACAGTTATGAGTGGTAAAAAGTATTGAAGCAAAAAAAATTGTCACAAATTTTGAGGGCACATTTTTTTTTGCAGGAAAAAGCTATTTTTCGGATTTTTTGGATTTTATGATAGTTAAAAACGGTCACAAAAACTGAATTTTTTTTTTTTTTATTCCATGACAGTTAAAAATTGTCACGATGGAGACGCAATTTTGGCAGAAAAAAAATATATTTATACAATATCCATAATTTATAACATTTTTTACCTGTCACGAAAGATCATAACTTTTTTTTGAGACATTTGCATATTACTTATGACATCTTTGTAACTTTCATGAAAGGTCATAAGATTTTTAATTGTCACAAAATGTCATAACTTTTAAATCTTCACTTTTTGAAATTCTCACATTATGTTCTAATCGTTGTCCTTTGTCCTACAAAAACTCCACGTAGTAGTAGTCCTATCTTATCTTTCATTTGTCAACACGAGTAGCTTCCACAATCACAAGATGTTTTTTTCTTCATTTTTTTCAATTATCTCTTTGTTTATTTAGTTTGAATTTTTTTGGATTTTTCTGATTTTTTTTTTGTTTGTTATGTGGTTGTCTAGGGTATTAATCATCAATTATATTACATTTTAATTGACAATTAATAGCTGTCAACATACATTCAAGTAGATCATCAATAAAAATAGTTAAATTTGATTGGAATAATTGATGGGGCAAAACTATCTATACAAAATTCAATCAAATGACATCGTTCCCACGTTTTAAACAAATATTAAAAAATTGTTAAATACACTTGCTCTATTTTTATAAATTTATGCAAGAAACTTGGGAAATTGACAGATTTGACCCTTAAAGTTTTCAGTTTGCCCAACTGACCTTAATTAGAAAAAAGTTTTCAAATGACCCATTTTATTATTTTGTGACGTATCAGAGAGGATGTAATGACAAATATACCCCTGAATTAATGAATCTACAACAAATATTGCACAGATTGCGAAGGTGGAGGACAATAAAATCTCGGGCGAGGTGGACATGCTTTACAGCTGTGAATTAAATGAAGTACCACCAACTTATTAATTCTCCACCAAATTTTTGTACTATCACTTAATATATACCCACACATTCGCACGGGTTGTAGAGAATAAAGGTTTGTTCAGTCTTTATTGTCCTCGCGGACATCTTTCATGTTTGAAGAACGTCCATACTTTTTCCAACATTTTCACATCGTGAACACCTTAAAGGAAGTCATTTGTTCATCTTTGACATCCTGAACGAAGTTAGTCTTTGAGTTGTTCATAATATTGTTTTCGATTCGTTCTGAATTTGATGTATATAGTTGGAGTCCGAAGTGAATTTAATGTCTGAACTTTTCTGGGTATATTTGTTGGTTAATAGTTAACTAAAAAAAAAAGTCAATGAAACTCAGTCGTGAATCTTCGTCTCAAGGTCGTGGTCAATGTTTGTTTGATTCACGGTCGTGGTTGAAGATGATGTTGGGGTCGTGGTTGTATACAGATACACTTTAATTGCCTGTGTTTCTTGATTGTTTGATTCACACCCGTGGTAATTAGTTCCTTCGGTCGTGGTTGTATACGGATACAATTTCTTAGTCTAACGGTCGTGGTCAGTTGTTGGGTAATTTTCGGTCGTGGTTGTTGGTTCTCACGGTCGTGGTGTGCAACATTGATTACTAATTACATTTGTGTTGTTATTATTATCCATGCAGAATACGTCGACTATTCGTGATCTACGGTGGCAAATGGAACGAGGTTGGTATGGTGTATGAAGGTGGCGTTATGGGTGGGCTAAATGTCGATGAAGCGATAACATATGTCGACCTAGTAAGTGCTTTGCACATTCTTACTAGAATTGATCCTGACTGA

mRNA sequence

ATGGCAAGCCGAGAGTCGAATTCCACTTGGAGATGCAGAAAACCCAAGGAAGATGCCAATCACATGCCTTCTAAAATGGCCCTGATTTCCGCTAACAGAGGGGAAGGGGAAAAGAAAGAACTTGGGATTTCGCTGCCAAAAGACTACCACTGTGGTCACGCAGAAGCATCCCCAATCCAGTTTGTGAAGACCGACAGGCTCCATCCACATTTAACTTCTCAAGATCCAGAAGGAGATGACCGTGAAAATCAGAATTTCTATCAGACCAAATTGCCCAACAGAATACGTCGACTATTCGTGATCTACGGTGGCAAATGGAACGAGGTTGGTATGGTGTATGAAGGTGGCGTTATGGGTGGGCTAAATGTCGATGAAGCGATAACATATGTCGACCTAGTAAGTGCTTTGCACATTCTTACTAGAATTGATCCTGACTGA

Coding sequence (CDS)

ATGGCAAGCCGAGAGTCGAATTCCACTTGGAGATGCAGAAAACCCAAGGAAGATGCCAATCACATGCCTTCTAAAATGGCCCTGATTTCCGCTAACAGAGGGGAAGGGGAAAAGAAAGAACTTGGGATTTCGCTGCCAAAAGACTACCACTGTGGTCACGCAGAAGCATCCCCAATCCAGTTTGTGAAGACCGACAGGCTCCATCCACATTTAACTTCTCAAGATCCAGAAGGAGATGACCGTGAAAATCAGAATTTCTATCAGACCAAATTGCCCAACAGAATACGTCGACTATTCGTGATCTACGGTGGCAAATGGAACGAGGTTGGTATGGTGTATGAAGGTGGCGTTATGGGTGGGCTAAATGTCGATGAAGCGATAACATATGTCGACCTAGTAAGTGCTTTGCACATTCTTACTAGAATTGATCCTGACTGA

Protein sequence

MASRESNSTWRCRKPKEDANHMPSKMALISANRGEGEKKELGISLPKDYHCGHAEASPIQFVKTDRLHPHLTSQDPEGDDRENQNFYQTKLPNRIRRLFVIYGGKWNEVGMVYEGGVMGGLNVDEAITYVDLVSALHILTRIDPD
Homology
[Close]
BLAST of Moc08g33540 vs. NCBI nr
Match: XP_022156834.1 (uncharacterized protein LOC111023667 [Momordica charantia])

HSP 1 Score: 93.2 bits (230), Expect = 2.0e-15
Identity = 43/54 (79.63%), Postives = 48/54 (88.89%), Query Frame = 0 

Query: 92  PNRIRRLFVIYGGKWNEVGMVYEGGVMGGLNVDEAITYVDLVSALHILTRIDPD 146
           P  +RRLFVIYGGKWNE G +YEGGVMGGL+VDE ITY +LVSALH+LTRIDPD
Sbjct: 18  PLVMRRLFVIYGGKWNEAGTMYEGGVMGGLDVDETITYANLVSALHMLTRIDPD 71

[Close]
BLAST of Moc08g33540 vs. NCBI nr
Match: XP_022156802.1 (uncharacterized protein LOC111023635 [Momordica charantia])

HSP 1 Score: 88.2 bits (217), Expect = 6.4e-14
Identity = 41/51 (80.39%), Postives = 45/51 (88.24%), Query Frame = 0 

Query: 95  IRRLFVIYGGKWNEVGMVYEGGVMGGLNVDEAITYVDLVSALHILTRIDPD 146
           +RRLFVIYGGKWNE G VYEGG MGGL+VDE ITY +LVSALH+LTRID D
Sbjct: 1   MRRLFVIYGGKWNEAGTVYEGGXMGGLDVDETITYANLVSALHMLTRIDLD 51

[Close]
BLAST of Moc08g33540 vs. NCBI nr
Match: XP_022154803.1 (uncharacterized protein LOC111021969 [Momordica charantia])

HSP 1 Score: 70.5 bits (171), Expect = 1.4e-08
Identity = 32/42 (76.19%), Postives = 36/42 (85.71%), Query Frame = 0 

Query: 104 GKWNEVGMVYEGGVMGGLNVDEAITYVDLVSALHILTRIDPD 146
           G+WNE G VYEGGVMGGLNVDE ITY DLVSA+  +TRI+PD
Sbjct: 17  GQWNEAGTVYEGGVMGGLNVDEGITYRDLVSAIFRMTRINPD 58

[Close]
BLAST of Moc08g33540 vs. ExPASy TrEMBL
Match: A0A6J1DUS4 (uncharacterized protein LOC111023667 OS=Momordica charantia OX=3673 GN=LOC111023667 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 9.6e-16
Identity = 43/54 (79.63%), Postives = 48/54 (88.89%), Query Frame = 0 

Query: 92  PNRIRRLFVIYGGKWNEVGMVYEGGVMGGLNVDEAITYVDLVSALHILTRIDPD 146
           P  +RRLFVIYGGKWNE G +YEGGVMGGL+VDE ITY +LVSALH+LTRIDPD
Sbjct: 18  PLVMRRLFVIYGGKWNEAGTMYEGGVMGGLDVDETITYANLVSALHMLTRIDPD 71

[Close]
BLAST of Moc08g33540 vs. ExPASy TrEMBL
Match: A0A6J1DSY0 (uncharacterized protein LOC111023635 OS=Momordica charantia OX=3673 GN=LOC111023635 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 3.1e-14
Identity = 41/51 (80.39%), Postives = 45/51 (88.24%), Query Frame = 0 

Query: 95  IRRLFVIYGGKWNEVGMVYEGGVMGGLNVDEAITYVDLVSALHILTRIDPD 146
           +RRLFVIYGGKWNE G VYEGG MGGL+VDE ITY +LVSALH+LTRID D
Sbjct: 1   MRRLFVIYGGKWNEAGTVYEGGXMGGLDVDETITYANLVSALHMLTRIDLD 51

[Close]
BLAST of Moc08g33540 vs. ExPASy TrEMBL
Match: A0A6J1DLB0 (uncharacterized protein LOC111021969 OS=Momordica charantia OX=3673 GN=LOC111021969 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 6.6e-09
Identity = 32/42 (76.19%), Postives = 36/42 (85.71%), Query Frame = 0 

Query: 104 GKWNEVGMVYEGGVMGGLNVDEAITYVDLVSALHILTRIDPD 146
           G+WNE G VYEGGVMGGLNVDE ITY DLVSA+  +TRI+PD
Sbjct: 17  GQWNEAGTVYEGGVMGGLNVDEGITYRDLVSAIFRMTRINPD 58

The following BLAST results are available for this feature:
BLAST of Moc08g33540 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022156834.12.0e-1579.63uncharacterized protein LOC111023667 [Momordica charantia][more]
XP_022156802.16.4e-1480.39uncharacterized protein LOC111023635 [Momordica charantia][more]
XP_022154803.11.4e-0876.19uncharacterized protein LOC111021969 [Momordica charantia][more]
BLAST of Moc08g33540 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc08g33540 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DUS49.6e-1679.63uncharacterized protein LOC111023667 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A6J1DSY03.1e-1480.39uncharacterized protein LOC111023635 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A6J1DLB06.6e-0976.19uncharacterized protein LOC111021969 OS=Momordica charantia OX=3673 GN=LOC111021... [more]
BLAST of Moc08g33540 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 68..84
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 64..84
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc08g33540.1Moc08g33540.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0008270 zinc ion binding