Moc08g33370 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc08g33370
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Locationchr8: 24236798 .. 24238297 (-)
RNA-Seq ExpressionMoc08g33370
SyntenyMoc08g33370
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAGTAAAAGATCTTCTTACGTGCAAGAAGATACACAAGACTTTGGGGGAGAGACCAGGGGATATGACAGACAAAGCTTGGAATGAGATGGATGAGCAGACCATTGCAAATATCAGAATGACATTATCAATGGGGGTATGCAGTCTCGTGGCGAAAGAGACGACTGCAAAAGAGTTGTTGAAGGCCTTGCAAGATAGGTATGAAAAACCTTCTGCCAATACAAAAATACTTCTATATAGAAGTATTTTAACATCCATATGGAGGAGGGAACCTCGGTGAATTCCCACATTAATGAGCTCACCGATATCTTGAACAAATTAAAAGGGATGGGTGTCAAGATTGAGGAGAAGGTGAAAGCTATGAGGCTGTTGACGTCTTTGCCTGATAGTTGGGAGACGATGAAGACCGCGGTGTCGAATTCGCTGGGAGAAAATAGCTTGAAATTTTCAGCTATTTGTGATGTCGCCTTATTTGAGGAAGCCTGGAGAAAATTAGGGAAAATGTCTGCAACTACTTCAGGGGCAGAAAATGGAGTTGAATCAGTTTTGGTAGCTCAGATTAAGGGGAAGGGCAAGATGAAGTACAACGGGAAGCAGCAACATAGGAATAATAAGGTAACGGGAGTTCCAGTGGAGAAGTTGAATATTTTTGCTGCCACAAGAATGGTCACTTCAAGAAACACTGCATGAAGCTTAAGGAGGATCAGGAAAATGAAGACACTCTAAATTATGTGTTAGCGGATGTGTTAGCTTGTATTGAAGGTAACACAACACCTGTAGACTGGTCATCAGAGTGGATAGTGGACAGTGCAGCTTTGGTGCATGCAGCTTCAGACATGAGTTGGTTCACGTCCTTTGCTGTAGAAAATCATGGCGTGGTGAGGATGGTAAATGGGAGACTCTCCAAGATCAGAGGAATTGGTGATGTTCGTCTGAGAACTGACAATGAGACCGAGTTAGTTTTTCATGGTGTCAGGTATGTACCCAGTTTCATGATGAATTTGATATCAGCGGGGAAGCTGGATGACGAAGGCTACAGAAGTGAGTTTGCAGAGAACAGATGGAAACTCATGAGAGGATCCGAGGTAGTGGTTGTTGGCTACAGAAAAGCTTCAGTGTATGTGTTGAGGTTTAGTGTTGCCAGAGAATTAGAGAGACAGGTTATACACAGGGCTGCAGATAGTTCAGGGGGAGACTTGAAAGAACTAGCAGCATTGACAGTCGGCTGAGAAGTAGAGGAAAGTGAAAGGGGAACAACTCAGTGAGGCTTTCAACGGACTATCAGTTTCGAGCCCCAGTTGTCAGACGGATTAACGAGCTGATGAAGTCGCGTAGGCGAAAGAGTGCATTGAGAAAGACTACAGTTGGTGCTAAGGTAGAGGGTGGTGTCTCTAGAGTGGCAACGAACTTGGGTGGGAGTGCCAAGTCATCAGTGAAAAAGCTTTCCTTTAAGAGTCGTTGGGTGCGAGTGAAGAAGGAAGCGTCGGAGACCACTTAG

mRNA sequence

ATGCAAGTAAAAGATCTTCTTACGTGCAAGAAGATACACAAGACTTTGGGGGAGAGACCAGGGGATATGACAGACAAAGCTTGGAATGAGATGGATGAGCAGACCATTGCAAATATCAGAATGACATTATCAATGGGGGTATGCAGTCTCGTGGCGAAAGAGACGACTGCAAAAGAGTTGTTGAAGGCCTTGCAAGATAGTTGGGAGACGATGAAGACCGCGGTGTCGAATTCGCTGGGAGAAAATAGCTTGAAATTTTCAGCTATTTGTGATGTCGCCTTATTTGAGGAAGCCTGGAGAAAATTAGGGAAAATGTCTGCAACTACTTCAGGGGCAGAAAATGGAGTTGAATCAGTTTTGGTAGCTCAGATTAAGGGGAAGGGCAAGATGAAGTACAACGGGAAGCAGCAACATAGGAATAATAAGCTTAAGGAGGATCAGGAAAATGAAGACACTCTAAATTATGTGTTAGCGGATGTGTTAGCTTGTATTGAAGAGAACAGATGGAAACTCATGAGAGGATCCGAGGTAGTGGTTGTTGGCTACAGAAAAGCTTCAGTGTATGTGTTGAGGTTTAGTGTTGCCAGAGAATTAGAGAGACAGTTTCGAGCCCCAGTTGTCAGACGGATTAACGAGCTGATGAAGTCGCGTAGGCGAAAGAGTGCATTGAGAAAGACTACAGTTGGTGCTAAGGTAGAGGGTGGTGTCTCTAGAGTGGCAACGAACTTGGGTGGGAGTGCCAAGTCATCAGTGAAAAAGCTTTCCTTTAAGAGTCGTTGGGTGCGAGTGAAGAAGGAAGCGTCGGAGACCACTTAG

Coding sequence (CDS)

ATGCAAGTAAAAGATCTTCTTACGTGCAAGAAGATACACAAGACTTTGGGGGAGAGACCAGGGGATATGACAGACAAAGCTTGGAATGAGATGGATGAGCAGACCATTGCAAATATCAGAATGACATTATCAATGGGGGTATGCAGTCTCGTGGCGAAAGAGACGACTGCAAAAGAGTTGTTGAAGGCCTTGCAAGATAGTTGGGAGACGATGAAGACCGCGGTGTCGAATTCGCTGGGAGAAAATAGCTTGAAATTTTCAGCTATTTGTGATGTCGCCTTATTTGAGGAAGCCTGGAGAAAATTAGGGAAAATGTCTGCAACTACTTCAGGGGCAGAAAATGGAGTTGAATCAGTTTTGGTAGCTCAGATTAAGGGGAAGGGCAAGATGAAGTACAACGGGAAGCAGCAACATAGGAATAATAAGCTTAAGGAGGATCAGGAAAATGAAGACACTCTAAATTATGTGTTAGCGGATGTGTTAGCTTGTATTGAAGAGAACAGATGGAAACTCATGAGAGGATCCGAGGTAGTGGTTGTTGGCTACAGAAAAGCTTCAGTGTATGTGTTGAGGTTTAGTGTTGCCAGAGAATTAGAGAGACAGTTTCGAGCCCCAGTTGTCAGACGGATTAACGAGCTGATGAAGTCGCGTAGGCGAAAGAGTGCATTGAGAAAGACTACAGTTGGTGCTAAGGTAGAGGGTGGTGTCTCTAGAGTGGCAACGAACTTGGGTGGGAGTGCCAAGTCATCAGTGAAAAAGCTTTCCTTTAAGAGTCGTTGGGTGCGAGTGAAGAAGGAAGCGTCGGAGACCACTTAG

Protein sequence

MQVKDLLTCKKIHKTLGERPGDMTDKAWNEMDEQTIANIRMTLSMGVCSLVAKETTAKELLKALQDSWETMKTAVSNSLGENSLKFSAICDVALFEEAWRKLGKMSATTSGAENGVESVLVAQIKGKGKMKYNGKQQHRNNKLKEDQENEDTLNYVLADVLACIEENRWKLMRGSEVVVVGYRKASVYVLRFSVARELERQFRAPVVRRINELMKSRRRKSALRKTTVGAKVEGGVSRVATNLGGSAKSSVKKLSFKSRWVRVKKEASETT
Homology
BLAST of Moc08g33370 vs. NCBI nr
Match: RVX11634.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 80.9 bits (198), Expect = 1.9e-11
Identity = 59/179 (32.96%), Postives = 88/179 (49.16%), Query Frame = 0

Query: 1   MQVKDLLTCKKIH-KTLGERPGDMTDKAWNEMDEQTIANIRMTLSMGVCSLVAKETTAKE 60
           MQ++D L  +K+H   LG +P  M  + W  +D Q +  IR+TLS  V   V KE T  +
Sbjct: 24  MQIEDYLNGRKLHLPLLGTKPESMKAEEWTLLDRQVLGVIRLTLSRFVAHNVVKEKTTAD 83

Query: 61  LLKALQD------------------SWETMKTAVSNSLGENSLKFSAICDVALFEEAWRK 120
           L+KAL +                  SWE M+ AVSNS G+  LK++ I D+ L EE  R+
Sbjct: 84  LMKALSEIDFDDEIRALIVLAYLPNSWEAMRMAVSNSTGKEKLKYNDIRDLILAEEIRRR 143

Query: 121 LGKMSATTSGAENGVESVLVAQIKGKGKMKYNGKQQHRNNKLKEDQENEDTLNYVLADV 161
                   +G  +G  S L  +I+G+G  K   K   + N+       +D+ N V+ +V
Sbjct: 144 -------DAGETSGSGSALNLEIRGRGHFKRQCKSPKKKNE-------DDSANAVIEEV 188

BLAST of Moc08g33370 vs. NCBI nr
Match: RVW28359.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 79.0 bits (193), Expect = 7.2e-11
Identity = 71/230 (30.87%), Postives = 108/230 (46.96%), Query Frame = 0

Query: 1   MQVKDLLTCKKIH-KTLGERPGDMTDKAWNEMDEQTIANIRMTLSMGVCSLVAKETTAKE 60
           MQ++D L  +K+H   LG +P  M  + W  +D Q +  IR+TLS  V   + KE T  +
Sbjct: 1   MQIEDYLYGRKLHLPLLGTKPESMKAEEWALLDRQVLGVIRLTLSRSVAHNIVKEKTTTD 60

Query: 61  LLKALQD------------------SWETMKTAVSNSLGENSLKFSAICDVALFEEAWRK 120
           L+KAL +                  SWE M+  VSNS G+  LK++ I D+ L EE    
Sbjct: 61  LMKALSEIDFDDEIHALIVLASLSNSWEAMRMVVSNSTGKEKLKYNDIRDLILAEE---- 120

Query: 121 LGKMSATTSGAENGVESVLVAQIKGKGKMKYNGKQQH--RNNKLKEDQENEDTLNYVLAD 180
              +  T +G  +G  S L  +I+G+ +     K  H  R  K  + +  +D+ N V  +
Sbjct: 121 ---IRQTDAGETSGSGSALNLEIRGRVQCWNCEKTSHFRRQCKSPKKKNEDDSANAVTEE 180

Query: 181 VLACIEENRWKLMRGSEVVVVGYRKASVYVLRFSVARELERQFRAPVVRR 210
             A  +  +  L  GS + VVG R   + +   SV   LE+    P +RR
Sbjct: 181 NYAVGDFGKVYLANGSALDVVGLRDVRILLPNGSVWL-LEKVQHIPDLRR 222

BLAST of Moc08g33370 vs. NCBI nr
Match: RVW95710.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 78.2 bits (191), Expect = 1.2e-10
Identity = 66/201 (32.84%), Postives = 97/201 (48.26%), Query Frame = 0

Query: 1   MQVKDLLTCKKIH-KTLGERPGDMTDKAWNEMDEQTIANIRMTLSMGVCSLVAKETTAKE 60
           MQ++D L  +K+H   LG +P +M  + W  +D Q +  IR+TLS  V   V KE T  +
Sbjct: 24  MQIEDYLYGRKLHLPLLGTKPENMKAEEWALLDRQVLGVIRLTLSRSVAHNVVKEKTTTD 83

Query: 61  LLKALQD------------------SWETMKTAVSNSLGENSLKFSAICDVALFEEAWRK 120
           L+KAL +                  SWE M+ AVSNS G+  LK++ I D+ L EE  ++
Sbjct: 84  LMKALSEIDFDDEIRALIILDSLPNSWEAMRMAVSNSTGKEKLKYNDIRDLILAEEIRQR 143

Query: 121 LGKMSATTSGAENGVESVLVAQIKGKGKMKYNGKQQHRNNKLKEDQENEDT-LNYVLADV 180
                   +G  +G  S L  + +G+G  K   K   + N  ++D  N  T  NYV+ D 
Sbjct: 144 -------DAGETSGSGSALNLETRGRGHFKRQCKSPKKKN--EDDSANVVTEENYVVGDF 203

Query: 181 LACIEENRWKLMRGSEVVVVG 182
                  +  L  GS + VVG
Sbjct: 204 ------GKVYLADGSTLDVVG 209

BLAST of Moc08g33370 vs. NCBI nr
Match: CAN65849.1 (hypothetical protein VITISV_038148 [Vitis vinifera])

HSP 1 Score: 77.4 bits (189), Expect = 2.1e-10
Identity = 56/161 (34.78%), Postives = 84/161 (52.17%), Query Frame = 0

Query: 1   MQVKDLLTCKKIH-KTLGERPGDMTDKAWNEMDEQTIANIRMTLSMGVCSLVAKETTAKE 60
           MQ++D L  +K+H   LG +P  M  + W  +D Q +  IR+TLS  V   V KE T  +
Sbjct: 24  MQIEDYLYGRKLHLPLLGTKPESMKAEEWALLDRQVLGVIRLTLSRSVAHNVVKEKTTAD 83

Query: 61  LLKALQDSWETMKTAVSNSLGENSLKFSAICDVALFEEAWRKLGKMSATTSGAENGVESV 120
           L+KAL   WE M+ AVSNS G+  LK++ I D+ L EE  R+        +G  +G  S 
Sbjct: 84  LMKAL-FRWEAMRMAVSNSTGKEKLKYNDIRDLILAEEIRRR-------DAGETSGSXSA 143

Query: 121 LVAQIKGKGKMKYNGKQQHRNNKLKEDQENEDTLNYVLADV 161
           L  + +G+G       Q+H      + +  +D+ N V  +V
Sbjct: 144 LNLETRGRGGTLIG--QRHLMQASPKKKNEDDSANAVTEEV 174

BLAST of Moc08g33370 vs. NCBI nr
Match: RVW89488.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 75.9 bits (185), Expect = 6.1e-10
Identity = 56/179 (31.28%), Postives = 86/179 (48.04%), Query Frame = 0

Query: 1   MQVKDLLTCKKIH-KTLGERPGDMTDKAWNEMDEQTIANIRMTLSMGVCSLVAKETTAKE 60
           MQ++D L  +K+H   LG +P  M  K W  +D Q I  IR+T+S  V   V KE T  +
Sbjct: 1   MQIEDYLYGRKLHLPLLGTKPRSMKAKEWALLDRQVIGVIRLTMSRSVAHNVVKEKTTAD 60

Query: 61  LLKALQD------------------SWETMKTAVSNSLGENSLKFSAICDVALFEEAWRK 120
           L+KAL +                  SWE M+ A+SNS+G+  LK++ I D+ L +E  R+
Sbjct: 61  LMKALSEIDFDDEIRALIVLASLPNSWEPMRMAISNSIGKEKLKYNDIRDLILAKEIRRR 120

Query: 121 LGKMSATTSGAENGVESVLVAQIKGKGKMKYNGKQQHRNNKLKEDQENEDTLNYVLADV 161
                    G  +G  S L  + + +G  K   K   + N+       +D+ N V+ +V
Sbjct: 121 -------DVGETSGSGSTLNLETRSRGHFKRQCKSPKKKNE-------DDSANVVIEEV 165

BLAST of Moc08g33370 vs. ExPASy TrEMBL
Match: A0A438JRQ0 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_2715 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 9.2e-12
Identity = 59/179 (32.96%), Postives = 88/179 (49.16%), Query Frame = 0

Query: 1   MQVKDLLTCKKIH-KTLGERPGDMTDKAWNEMDEQTIANIRMTLSMGVCSLVAKETTAKE 60
           MQ++D L  +K+H   LG +P  M  + W  +D Q +  IR+TLS  V   V KE T  +
Sbjct: 24  MQIEDYLNGRKLHLPLLGTKPESMKAEEWTLLDRQVLGVIRLTLSRFVAHNVVKEKTTAD 83

Query: 61  LLKALQD------------------SWETMKTAVSNSLGENSLKFSAICDVALFEEAWRK 120
           L+KAL +                  SWE M+ AVSNS G+  LK++ I D+ L EE  R+
Sbjct: 84  LMKALSEIDFDDEIRALIVLAYLPNSWEAMRMAVSNSTGKEKLKYNDIRDLILAEEIRRR 143

Query: 121 LGKMSATTSGAENGVESVLVAQIKGKGKMKYNGKQQHRNNKLKEDQENEDTLNYVLADV 161
                   +G  +G  S L  +I+G+G  K   K   + N+       +D+ N V+ +V
Sbjct: 144 -------DAGETSGSGSALNLEIRGRGHFKRQCKSPKKKNE-------DDSANAVIEEV 188

BLAST of Moc08g33370 vs. ExPASy TrEMBL
Match: A0A438CYS1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_2950 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 3.5e-11
Identity = 71/230 (30.87%), Postives = 108/230 (46.96%), Query Frame = 0

Query: 1   MQVKDLLTCKKIH-KTLGERPGDMTDKAWNEMDEQTIANIRMTLSMGVCSLVAKETTAKE 60
           MQ++D L  +K+H   LG +P  M  + W  +D Q +  IR+TLS  V   + KE T  +
Sbjct: 1   MQIEDYLYGRKLHLPLLGTKPESMKAEEWALLDRQVLGVIRLTLSRSVAHNIVKEKTTTD 60

Query: 61  LLKALQD------------------SWETMKTAVSNSLGENSLKFSAICDVALFEEAWRK 120
           L+KAL +                  SWE M+  VSNS G+  LK++ I D+ L EE    
Sbjct: 61  LMKALSEIDFDDEIHALIVLASLSNSWEAMRMVVSNSTGKEKLKYNDIRDLILAEE---- 120

Query: 121 LGKMSATTSGAENGVESVLVAQIKGKGKMKYNGKQQH--RNNKLKEDQENEDTLNYVLAD 180
              +  T +G  +G  S L  +I+G+ +     K  H  R  K  + +  +D+ N V  +
Sbjct: 121 ---IRQTDAGETSGSGSALNLEIRGRVQCWNCEKTSHFRRQCKSPKKKNEDDSANAVTEE 180

Query: 181 VLACIEENRWKLMRGSEVVVVGYRKASVYVLRFSVARELERQFRAPVVRR 210
             A  +  +  L  GS + VVG R   + +   SV   LE+    P +RR
Sbjct: 181 NYAVGDFGKVYLANGSALDVVGLRDVRILLPNGSVWL-LEKVQHIPDLRR 222

BLAST of Moc08g33370 vs. ExPASy TrEMBL
Match: A0A2N9IKQ5 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS52541 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 4.6e-11
Identity = 62/201 (30.85%), Postives = 92/201 (45.77%), Query Frame = 0

Query: 1   MQVKDLLTCKKIH-KTLGERPGDMTDKAWNEMDEQTIANIRMTLSMGVCSLVAKETTAKE 60
           MQ++D L  KK+H   LGE+P DM D  W  +D Q +  IR+TLS  V   V KE T  E
Sbjct: 24  MQIEDYLYGKKLHLPLLGEKPEDMEDAEWTLLDRQVLGVIRLTLSRTVAHNVVKEKTTAE 83

Query: 61  LLKAL------------------------QDSWETMKTAVSNSLGENSLKFSAICDVALF 120
           L+ AL                          SWE M+ AVSNS G+  LK++ I D+ L 
Sbjct: 84  LMTALCGMYEKPSANNKVHLMKKLVQSKNGGSWEAMRMAVSNSAGKGKLKYNDIRDLILG 143

Query: 121 EEAWRKLGKMSATTSGAENGVESVLVAQIKGKGKMKYNGKQQHRNNKLKEDQENEDTLNY 177
           EE  R+        +G  +   S L  + +G+GK +   + + ++ K +   +    L  
Sbjct: 144 EEVRRR-------DAGETSSSGSALNLEARGRGKDRNYNRGRSKSRKGRSKSKPGRQLEC 203

BLAST of Moc08g33370 vs. ExPASy TrEMBL
Match: A0A438IG53 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_2776 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 6.0e-11
Identity = 66/201 (32.84%), Postives = 97/201 (48.26%), Query Frame = 0

Query: 1   MQVKDLLTCKKIH-KTLGERPGDMTDKAWNEMDEQTIANIRMTLSMGVCSLVAKETTAKE 60
           MQ++D L  +K+H   LG +P +M  + W  +D Q +  IR+TLS  V   V KE T  +
Sbjct: 24  MQIEDYLYGRKLHLPLLGTKPENMKAEEWALLDRQVLGVIRLTLSRSVAHNVVKEKTTTD 83

Query: 61  LLKALQD------------------SWETMKTAVSNSLGENSLKFSAICDVALFEEAWRK 120
           L+KAL +                  SWE M+ AVSNS G+  LK++ I D+ L EE  ++
Sbjct: 84  LMKALSEIDFDDEIRALIILDSLPNSWEAMRMAVSNSTGKEKLKYNDIRDLILAEEIRQR 143

Query: 121 LGKMSATTSGAENGVESVLVAQIKGKGKMKYNGKQQHRNNKLKEDQENEDT-LNYVLADV 180
                   +G  +G  S L  + +G+G  K   K   + N  ++D  N  T  NYV+ D 
Sbjct: 144 -------DAGETSGSGSALNLETRGRGHFKRQCKSPKKKN--EDDSANVVTEENYVVGDF 203

Query: 181 LACIEENRWKLMRGSEVVVVG 182
                  +  L  GS + VVG
Sbjct: 204 ------GKVYLADGSTLDVVG 209

BLAST of Moc08g33370 vs. ExPASy TrEMBL
Match: A0A7N2LJ68 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 7.8e-11
Identity = 47/129 (36.43%), Postives = 71/129 (55.04%), Query Frame = 0

Query: 1   MQVKDLLTCKKIH-KTLGERPGDMTDKAWNEMDEQTIANIRMTLSMGVCSLVAKETTAKE 60
           MQ++D L  +K+H   LG +P  M  K W  +D Q +  I++TLS  V   V KE T  +
Sbjct: 24  MQIEDYLYGRKLHLPLLGTKPEAMKAKEWALLDRQVLGVIKLTLSRSVAHNVVKENTTAD 83

Query: 61  LLKALQDSWETMKTAVSNSLGENSLKFSAICDVALFEEAWRKLGKMSATTSGAENGVESV 120
           L+KAL   WE M+ AV+NS  +  LK++ I D+ L EE  ++        +G  +G  S 
Sbjct: 84  LMKALSGIWEAMRMAVNNSTRKEKLKYNDIRDLILAEEIRKR-------DAGETSGSSSA 143

Query: 121 LVAQIKGKG 129
           L  + +G+G
Sbjct: 144 LNLETRGRG 145

BLAST of Moc08g33370 vs. TAIR 10
Match: AT3G29785.1 (unknown protein; Has 90 Blast hits to 90 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 48.9 bits (115), Expect = 7.4e-06
Identity = 25/73 (34.25%), Postives = 42/73 (57.53%), Query Frame = 0

Query: 1  MQVKDLLTCKKIHKTLGERPGDMTDKAWNEMDEQTIANIRMTLSMGVCSLVAKETTAKEL 60
          M+++D L  KK+H+ LG++   M+   WN +  Q +  IR+T+S  +   VAKE +   L
Sbjct: 19 MKIEDYLYGKKLHQPLGKKVETMSQDDWNILYRQVLDVIRLTISKNIAHNVAKEKSPDGL 78

Query: 61 LKALQDSWETMKT 74
          +K L D ++   T
Sbjct: 79 MKVLSDIYKKPST 91

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
RVX11634.11.9e-1132.96Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera][more]
RVW28359.17.2e-1130.87Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera][more]
RVW95710.11.2e-1032.84Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera][more]
CAN65849.12.1e-1034.78hypothetical protein VITISV_038148 [Vitis vinifera][more]
RVW89488.16.1e-1031.28Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A438JRQ09.2e-1232.96Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX... [more]
A0A438CYS13.5e-1130.87Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX... [more]
A0A2N9IKQ54.6e-1130.85Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS52541 PE=4 SV=1[more]
A0A438IG536.0e-1132.84Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX... [more]
A0A7N2LJ687.8e-1136.43Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G29785.17.4e-0634.25unknown protein; Has 90 Blast hits to 90 proteins in 7 species: Archae - 0; Bact... [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc08g33370.1Moc08g33370.1mRNA