Moc08g32780 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc08g32780
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	ribosome production factor 1-like
Location	chr8: 23772469 .. 23775159 (+)
RNA-Seq Expression	Moc08g32780
Synteny	Moc08g32780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAGAGGAAAAAAAGAACAAGAGGGATATTATCCCATCAATGATAAAGAACAAGGAAAAGAGGAAAGAAGTGCACGCCAACCTCAAGCAGCAGAAGAAGCTTGAGAAACGCAAGAGGGCCAAGGCTCGTGATGCCTCTGAAAAGCAAGCTCTTGAACTTGGAGAAGAAGTATCACATTCACATCATCTACTCATTTAATCTATGTATCCACTATCTTAGGGATTCTGACTTTGTCTTCTAATCTATTTTTATCCTTTCTGTAGCCTCCTCCCAGGATGATTCCTCGCACCATTGAGAACACCAGGGAGGTTGATGAGACTGTTTGCAAACCTGATGATGAAGAGGTTTTTTGTTTGTTTTTTCAAATCATAATATATGAAATGTTTTGTACTGTTTGTTTATGTATGTATATATGTGTGTGTGTCACATTTAGTAGGGAACACCTTTGTAATATGTCGAGTTTTTGTTCTCTGCAGCTATTTGCAGGAAATGATGCCGATGAATTTAGTTCGATCATAAAGCGCCACACTTTGCCAAAAGTTCTAATAACTACTTGTCGTTTTAACTCTTCTGTAAGACCCTTCATTATTACTAGTTAAACAATAATTTTGTTTTTAGAAACCTGCATTTGATGGAAAGCAACCTAAAGCATCTACATTTGATCAAATTTGGTACGTTATATTTAAATCTTCTTTGTATGTGACTTGCTATTTGCAGATTGGACCTTCTTTTATATCAGAGTTGCTTTCAGTGATTCCAAATGCACATTACTACAAGAGAGGAACTAACGATTTGAAGAAGGTTATGCTCATATATGTTTATCTTTATACACAGAAGGACAAGGGAAATTAAGAAAAACAAGAATAATACAGAAGAAAGATTTTGCAGCTTGTTATTGGGGTGATAACTTATTTGTTTGCTCGTTTCTTCTTTTGCTTGTAGATTATCGAATATGCAAATGCCAAGGACTTCACTTCTTTGATGGTTGTTCATACGAGTAGGAGAAAATTAGGTAGATGATAATCTTTCGCAATCCTTGTAGTTCCTTCTTGCATGTTCTTTCATCCCTTGCAGACATGTTCTCTCATTTATGAATTGTTTGTATTAGGTAGATTATTTCCTCAGTCTATATTATTGTTTTGAAATTCTTTCAGATGGCCTTCTAATCATTGGCTTACCTGAGGGACCTACTGCCCATTTTAAGATATCAAATGTTGTCTTACGAAAGGATATTAAGGTAATCTGGTTCAGGTCAATAATTCTCCACTTAGTTCCATTTATGAATTGTTGTGTTATTTGTTACTAGTACTATGTTTATCTGGAGGAATAAATATTCCATGAAACTTTTACCATTTTATCTATGCTTGCTTGTAGAATCATGGAAATCCAACCAGCCATGAGCCAGAGCTTGTATTGACCAACTTCACAACACGCCTTGGTCTCCGTGTTGGAAGGTTGCTTTCTGTATCTTAGTTACTTGATTTTTTTGAAATACTGCCTCTTATTAAGGTTGCATTTCAGATTTTGGGGTTCGTGTTATTTTTCTGGTTTATTACTCTTTTGTGGTTATGATATCTCTATTCTCAAGTTTTTCTCAATTTGTTGGCTTCTATTGTTGTGTTGTTTCTTTAGATTAATTCAATCACTATTCCCTCAAGATCCTAATTTTCGTGGTCGGCGAGTTGTAACGTTTCACAACCAACGGGACTTTGTATTCTTCCGGCATCACCGGTGTGATACCATATCTTTCATACCTTTACATGTTTCAAATATTTTCTCTGTATGCATGAGAGTTTGCATTATGATGAACGTGTGGCTTTTTTTGTCTTCTCAGTTACATTTTTGATAGCAAGGAAAATAAAAAAGAGGCTGACTCGAAAAGTAACTCCAAGGATGCCAAGGGTGAGAAAGTTCCTCAGCAGAAAGTAATTGCACGGCTTCAGGTTAGTATTATTTTTTAGGAAAATTAGAAGGCATTTTTGCTCCTATGCAAATTCGATCTAGTAGGCAAGCACATCCTCACGTAGAGTGATCAAAATTGTCATGTTAATATTTTTGCATCAATTTTGCCCCAAGGGTAGCCCAGTTGTCAAGGGCTTGGGGTCTCTTGGTCATACCAGTGTAGAGATCTCAAGCTCGAACCTTCCGGTGAGTTTAATACCAAAAACCTTTGATGCCTCTCGGGTCTAGGCTTTGGGACAGATGCAGGTAATCCTGAGTATAGGGGGGGAGCAAAGCTCCATCTCCCAGTTATTAAAAAAAGAATAAATATATATATATATATATATGTATCAATTTTGATTGGTGTGGTTAGGTTTGAATGAGAAAGTGATATTATGAGAAACATGAGAAATAGTTTAGAACAAAATAAAACTAAACAAAACATGAGGGGGAGTAGTAGCATAGTAACAAACAACTGACTGATTGATTGTGAGTCTTCATTTTTAGGAATGCGGTCCTCGCTTCACGATGAAATTGATCAGTTTGCAGCATGGGACCTTTGATTCTAAAGGCGGGGAATATGAGTGGGTTCATAAGGTAAGTCTTACTGTCTCTTCTCTGTTAGGATTTCAATATGAAATGCATGGATATTATATCATGATCCATCCTATTTGTCTAATTTTTTCTTTAACTTCCTTTAAATTCCAGCCTGAAATGGACACGAGCCGCAGAAGATTTTTCTTGTGA

mRNA sequence

ATGGGAGAGGAAAAAAAGAACAAGAGGGATATTATCCCATCAATGATAAAGAACAAGGAAAAGAGGAAAGAAGTGCACGCCAACCTCAAGCAGCAGAAGAAGCTTGAGAAACGCAAGAGGGCCAAGGCTCGTGATGCCTCTGAAAAGCAAGCTCTTGAACTTGGAGAAGAACCTCCTCCCAGGATGATTCCTCGCACCATTGAGAACACCAGGGAGGTTGATGAGACTGTTTGCAAACCTGATGATGAAGAGCTATTTGCAGGAAATGATGCCGATGAATTTAGTTCGATCATAAAGCGCCACACTTTGCCAAAAGTTCTAATAACTACTTGTCGTTTTAACTCTTCTATTGGACCTTCTTTTATATCAGAGTTGCTTTCAGTGATTCCAAATGCACATTACTACAAGAGAGGAACTAACGATTTGAAGAAGATTATCGAATATGCAAATGCCAAGGACTTCACTTCTTTGATGGTTGTTCATACGAGTAGGAGAAAATTAGATGGCCTTCTAATCATTGGCTTACCTGAGGGACCTACTGCCCATTTTAAGATATCAAATGTTGTCTTACGAAAGGATATTAAGAATCATGGAAATCCAACCAGCCATGAGCCAGAGCTTGTATTGACCAACTTCACAACACGCCTTGGTCTCCGTGTTGGAAGATTAATTCAATCACTATTCCCTCAAGATCCTAATTTTCGTGGTCGGCGAGTTGTAACGTTTCACAACCAACGGGACTTTGTATTCTTCCGGCATCACCGTTACATTTTTGATAGCAAGGAAAATAAAAAAGAGGCTGACTCGAAAAGTAACTCCAAGGATGCCAAGGGTGAGAAAGTTCCTCAGCAGAAAGTAATTGCACGGCTTCAGGAATGCGGTCCTCGCTTCACGATGAAATTGATCAGTTTGCAGCATGGGACCTTTGATTCTAAAGGCGGGGAATATGAGTGGGTTCATAAGCCTGAAATGGACACGAGCCGCAGAAGATTTTTCTTGTGA

Coding sequence (CDS)

ATGGGAGAGGAAAAAAAGAACAAGAGGGATATTATCCCATCAATGATAAAGAACAAGGAAAAGAGGAAAGAAGTGCACGCCAACCTCAAGCAGCAGAAGAAGCTTGAGAAACGCAAGAGGGCCAAGGCTCGTGATGCCTCTGAAAAGCAAGCTCTTGAACTTGGAGAAGAACCTCCTCCCAGGATGATTCCTCGCACCATTGAGAACACCAGGGAGGTTGATGAGACTGTTTGCAAACCTGATGATGAAGAGCTATTTGCAGGAAATGATGCCGATGAATTTAGTTCGATCATAAAGCGCCACACTTTGCCAAAAGTTCTAATAACTACTTGTCGTTTTAACTCTTCTATTGGACCTTCTTTTATATCAGAGTTGCTTTCAGTGATTCCAAATGCACATTACTACAAGAGAGGAACTAACGATTTGAAGAAGATTATCGAATATGCAAATGCCAAGGACTTCACTTCTTTGATGGTTGTTCATACGAGTAGGAGAAAATTAGATGGCCTTCTAATCATTGGCTTACCTGAGGGACCTACTGCCCATTTTAAGATATCAAATGTTGTCTTACGAAAGGATATTAAGAATCATGGAAATCCAACCAGCCATGAGCCAGAGCTTGTATTGACCAACTTCACAACACGCCTTGGTCTCCGTGTTGGAAGATTAATTCAATCACTATTCCCTCAAGATCCTAATTTTCGTGGTCGGCGAGTTGTAACGTTTCACAACCAACGGGACTTTGTATTCTTCCGGCATCACCGTTACATTTTTGATAGCAAGGAAAATAAAAAAGAGGCTGACTCGAAAAGTAACTCCAAGGATGCCAAGGGTGAGAAAGTTCCTCAGCAGAAAGTAATTGCACGGCTTCAGGAATGCGGTCCTCGCTTCACGATGAAATTGATCAGTTTGCAGCATGGGACCTTTGATTCTAAAGGCGGGGAATATGAGTGGGTTCATAAGCCTGAAATGGACACGAGCCGCAGAAGATTTTTCTTGTGA

Protein sequence

MGEEKKNKRDIIPSMIKNKEKRKEVHANLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRHTLPKVLITTCRFNSSIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPTSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPQQKVIARLQECGPRFTMKLISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

Homology

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BLAST of Moc08g32780 vs. NCBI nr
Match: XP_022155906.1 (ribosome production factor 1-like [Momordica charantia])

HSP 1 Score: 658.3 bits (1697), Expect = 3.5e-185
Identity = 333/333 (100.00%), Postives = 333/333 (100.00%), Query Frame = 0


Query: 1   MGEEKKNKRDIIPSMIKNKEKRKEVHANLKQQKKLEKRKRAKARDASEKQALELGEEPPP 60
           MGEEKKNKRDIIPSMIKNKEKRKEVHANLKQQKKLEKRKRAKARDASEKQALELGEEPPP
Sbjct: 1   MGEEKKNKRDIIPSMIKNKEKRKEVHANLKQQKKLEKRKRAKARDASEKQALELGEEPPP 60

Query: 61  RMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRHTLPKVLITTCRFNSSIGPS 120
           RMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRHTLPKVLITTCRFNSSIGPS
Sbjct: 61  RMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRHTLPKVLITTCRFNSSIGPS 120

Query: 121 FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPT 180
           FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPT
Sbjct: 121 FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPT 180

Query: 181 AHFKISNVVLRKDIKNHGNPTSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVV 240
           AHFKISNVVLRKDIKNHGNPTSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVV
Sbjct: 181 AHFKISNVVLRKDIKNHGNPTSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVV 240

Query: 241 TFHNQRDFVFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPQQKVIARLQECGPRFTMK 300
           TFHNQRDFVFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPQQKVIARLQECGPRFTMK
Sbjct: 241 TFHNQRDFVFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPQQKVIARLQECGPRFTMK 300

Query: 301 LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL 334
           LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Sbjct: 301 LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL 333

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BLAST of Moc08g32780 vs. NCBI nr
Match: XP_022156150.1 (ribosome production factor 1-like [Momordica charantia] >XP_022156151.1 ribosome production factor 1-like [Momordica charantia])

HSP 1 Score: 655.2 bits (1689), Expect = 3.0e-184
Identity = 330/333 (99.10%), Postives = 333/333 (100.00%), Query Frame = 0


Query: 1   MGEEKKNKRDIIPSMIKNKEKRKEVHANLKQQKKLEKRKRAKARDASEKQALELGEEPPP 60
           MGEEKKNKRDIIPSMIKNKEKRKEVHANLKQQKKLEKRKRAKARDASEKQALELGEEPPP
Sbjct: 1   MGEEKKNKRDIIPSMIKNKEKRKEVHANLKQQKKLEKRKRAKARDASEKQALELGEEPPP 60

Query: 61  RMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRHTLPKVLITTCRFNSSIGPS 120
           RMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRHTLPKVLITTCRFNS+IGPS
Sbjct: 61  RMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRHTLPKVLITTCRFNSTIGPS 120

Query: 121 FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPT 180
           FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPT
Sbjct: 121 FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPT 180

Query: 181 AHFKISNVVLRKDIKNHGNPTSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVV 240
           AHFKISNVVLRKDIKNHGNPTSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVV
Sbjct: 181 AHFKISNVVLRKDIKNHGNPTSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVV 240

Query: 241 TFHNQRDFVFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPQQKVIARLQECGPRFTMK 300
           TFHNQRDF+FFRHHRYIFDSKENKKEADSKSNSKDAKGEKVP+QKVIARLQECGPRFTMK
Sbjct: 241 TFHNQRDFIFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPKQKVIARLQECGPRFTMK 300

Query: 301 LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL 334
           LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Sbjct: 301 LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL 333

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BLAST of Moc08g32780 vs. NCBI nr
Match: XP_008443155.1 (PREDICTED: ribosome production factor 1 isoform X1 [Cucumis melo] >XP_008443156.1 PREDICTED: ribosome production factor 1 isoform X1 [Cucumis melo] >XP_016899701.1 PREDICTED: ribosome production factor 1 isoform X1 [Cucumis melo] >KAA0053947.1 ribosome production factor 1 isoform X1 [Cucumis melo var. makuwa] >TYK25457.1 ribosome production factor 1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 619.8 bits (1597), Expect = 1.4e-173
Identity = 315/333 (94.59%), Postives = 321/333 (96.40%), Query Frame = 0


Query: 1   MGEEKKNKRDIIPSMIKNKEKRKEVHANLKQQKKLEKRKRAKARDASEKQALELGEEPPP 60
           MGEEKKNK  IIPSMIKNKEKR EVHANLK QKKLEKRKRAKARDA+EKQALELGEE PP
Sbjct: 1   MGEEKKNK-GIIPSMIKNKEKRAEVHANLKHQKKLEKRKRAKARDAAEKQALELGEELPP 60

Query: 61  RMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRHTLPKVLITTCRFNSSIGPS 120
           R IPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR  LPKVLITTCRFNS+IGP+
Sbjct: 61  RKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKVLITTCRFNSTIGPA 120

Query: 121 FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPT 180
           FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPT
Sbjct: 121 FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPT 180

Query: 181 AHFKISNVVLRKDIKNHGNPTSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVV 240
           AHFKISNVVLRKDIKNHGNPT H+PELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVV
Sbjct: 181 AHFKISNVVLRKDIKNHGNPTGHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVV 240

Query: 241 TFHNQRDFVFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPQQKVIARLQECGPRFTMK 300
           TFHNQRDF+FFRHHRYIF+SKENKKEADSK  SKD KGEKVPQQKVIARLQECGPRFTMK
Sbjct: 241 TFHNQRDFIFFRHHRYIFESKENKKEADSKKKSKDTKGEKVPQQKVIARLQECGPRFTMK 300

Query: 301 LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL 334
           LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Sbjct: 301 LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL 332

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BLAST of Moc08g32780 vs. NCBI nr
Match: XP_038906205.1 (ribosome production factor 1 [Benincasa hispida])

HSP 1 Score: 617.1 bits (1590), Expect = 9.0e-173
Identity = 312/333 (93.69%), Postives = 321/333 (96.40%), Query Frame = 0


Query: 1   MGEEKKNKRDIIPSMIKNKEKRKEVHANLKQQKKLEKRKRAKARDASEKQALELGEEPPP 60
           MGEE KN R IIPSMIKNKEKR EVHANLK QKKLEKRKRAKARDA+EKQALELGEE PP
Sbjct: 1   MGEENKN-RGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPP 60

Query: 61  RMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRHTLPKVLITTCRFNSSIGPS 120
           R IPRTIENTREVDET+CKPDDEELFAGNDADEFSSIIKR  LPKVLITTCRFNS+IGP+
Sbjct: 61  RKIPRTIENTREVDETLCKPDDEELFAGNDADEFSSIIKREILPKVLITTCRFNSTIGPT 120

Query: 121 FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPT 180
           FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPT
Sbjct: 121 FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPT 180

Query: 181 AHFKISNVVLRKDIKNHGNPTSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVV 240
           AHFKISNVVLRKDIKNHGNPTSH+PELVLTNFTTRLGLR+GRLIQ+LFPQDPNFRGRRVV
Sbjct: 181 AHFKISNVVLRKDIKNHGNPTSHQPELVLTNFTTRLGLRIGRLIQALFPQDPNFRGRRVV 240

Query: 241 TFHNQRDFVFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPQQKVIARLQECGPRFTMK 300
           TFHNQRDF+FFRHHRYIF+SKENKKEADSK  SKD KGEKVPQQKVIARLQECGPRFTMK
Sbjct: 241 TFHNQRDFIFFRHHRYIFESKENKKEADSKKKSKDTKGEKVPQQKVIARLQECGPRFTMK 300

Query: 301 LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL 334
           LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Sbjct: 301 LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL 332

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BLAST of Moc08g32780 vs. NCBI nr
Match: XP_031737500.1 (ribosome production factor 1 [Cucumis sativus] >KGN59366.1 hypothetical protein Csa_002461 [Cucumis sativus])

HSP 1 Score: 611.3 bits (1575), Expect = 5.0e-171
Identity = 309/333 (92.79%), Postives = 319/333 (95.80%), Query Frame = 0


Query: 1   MGEEKKNKRDIIPSMIKNKEKRKEVHANLKQQKKLEKRKRAKARDASEKQALELGEEPPP 60
           MGEEKKNK  I+PS IKNKEKR EVHANLK QKKLEKRKRAKARDA+EKQALELGEE PP
Sbjct: 1   MGEEKKNK-VIVPSTIKNKEKRAEVHANLKHQKKLEKRKRAKARDAAEKQALELGEELPP 60

Query: 61  RMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRHTLPKVLITTCRFNSSIGPS 120
           R IPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR  LPK+LITTCRFNS+IGP+
Sbjct: 61  RKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKILITTCRFNSTIGPA 120

Query: 121 FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPT 180
           FISELLSVIPNAHYYKRGTNDLKKI+EYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPT
Sbjct: 121 FISELLSVIPNAHYYKRGTNDLKKIVEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPT 180

Query: 181 AHFKISNVVLRKDIKNHGNPTSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVV 240
           AHFKISNVVLRK+IKNHGNPT H+PELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVV
Sbjct: 181 AHFKISNVVLRKEIKNHGNPTGHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVV 240

Query: 241 TFHNQRDFVFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPQQKVIARLQECGPRFTMK 300
           TFHNQRDF+FFRHHRYIF+SKENKKEADSK  SK  KGEKVPQQKVIARLQECGPRFTMK
Sbjct: 241 TFHNQRDFIFFRHHRYIFESKENKKEADSKKKSKGTKGEKVPQQKVIARLQECGPRFTMK 300

Query: 301 LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL 334
           LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Sbjct: 301 LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL 332

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BLAST of Moc08g32780 vs. ExPASy Swiss-Prot
Match: Q8AVP1 (Ribosome production factor 1 OS=Xenopus laevis OX=8355 GN=rpf1 PE=2 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 1.0e-73
Identity = 156/326 (47.85%), Postives = 206/326 (63.19%), Query Frame = 0


Query: 14  SMIKNKEKRKEVHANLKQQKKLEK----RKRAKARDASEKQALELGEEPPPRMIPRTIEN 73
           S IKNK++R+ +   LKQ+K+ EK    +KR K R+A       LG++ PP+ +P+TIEN
Sbjct: 49  SEIKNKQRRQFMFIKLKQEKRKEKLILRKKRKKEREA-------LGDKAPPKPVPKTIEN 108

Query: 74  TREVDETVCKPDDEELFAGNDADEFSSIIKRHTLPKVLITTCRFNSSIGPSFISELLSVI 133
            R  DET   P DEE+      DEF+    + T PK+LITT          F  +L S+I
Sbjct: 109 QRVYDETTVDPADEEVALDEATDEFAPYFNKQTTPKILITTSDRPRGRSVRFTEQLSSII 168

Query: 134 PNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVV 193
           PN+  Y R    LKKII    ++D+T L+V++  R+  +GL++  LP+GPTAHFKISNV 
Sbjct: 169 PNSDVYYRRGLALKKIIPQCVSRDYTDLLVINEDRKVPNGLVLCHLPDGPTAHFKISNVR 228

Query: 194 LRKDIKNHG-NPTSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDF 253
           LRK++K  G  PT H+PE++L NFTTRLG  +GR+  SL+P DP+F GR+V TFHNQRD+
Sbjct: 229 LRKEMKRKGKEPTEHKPEVILNNFTTRLGHSIGRMFASLYPHDPHFVGRQVATFHNQRDY 288

Query: 254 VFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPQQKVIARLQECGPRFTMKLISLQHGT 313
           +FFR+HRY+F S++                           +QE GPRFT+KL SLQ GT
Sbjct: 289 IFFRYHRYLFKSEKK------------------------VGIQELGPRFTLKLRSLQKGT 343

Query: 314 FDSKGGEYEWVHK-PEMDTSRRRFFL 334
           FDSK GEYEWVHK  EMDTSRR+F L
Sbjct: 349 FDSKYGEYEWVHKRHEMDTSRRKFHL 343

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BLAST of Moc08g32780 vs. ExPASy Swiss-Prot
Match: Q5R631 (Ribosome production factor 1 OS=Pongo abelii OX=9601 GN=RPF1 PE=2 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 5.0e-73
Identity = 158/322 (49.07%), Postives = 204/322 (63.35%), Query Frame = 0


Query: 14  SMIKNKEKRKEVHANLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREV 73
           S IKNKE+R  +    KQQ++ EK   AK +   E++A  LG++ PP+ +P+TI+N R  
Sbjct: 55  SEIKNKERRHLMFTRWKQQQRKEK-LAAKKKLKKEREA--LGDKAPPKPVPKTIDNQRVY 114

Query: 74  DETVCKPDDEELFAGNDADEFSSIIKRHTLPKVLITTCRFNSSIGPSFISELLSVIPNAH 133
           DET   P+DEE+      DEF+S   + T PK+LITT             +L +VIPN+H
Sbjct: 115 DETTVDPNDEEVAYDEATDEFASYFNKQTSPKILITTSDRPHGRTVRLCEQLSTVIPNSH 174

Query: 134 YYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKD 193
            Y R    LKKII    A+DFT L+V++  R+  +GL++  LP GPTAHFK+S+V LRK+
Sbjct: 175 VYYRRGLALKKIIPQCIARDFTDLIVINEDRKTPNGLILSHLPNGPTAHFKMSSVRLRKE 234

Query: 194 IKNHG-NPTSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFR 253
           IK  G +PT H PE++L NFTTRLG  +GR+  SLFP +P F GR+V TFHNQRD++FFR
Sbjct: 235 IKRRGKDPTEHIPEIILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVATFHNQRDYIFFR 294

Query: 254 HHRYIFDSKENKKEADSKSNSKDAKGEKVPQQKVIARLQECGPRFTMKLISLQHGTFDSK 313
            HRYIF S++                           +QE GPRFT+KL SLQ GTFDSK
Sbjct: 295 FHRYIFRSEKK------------------------VGIQELGPRFTLKLRSLQKGTFDSK 349

Query: 314 GGEYEWVHKP-EMDTSRRRFFL 334
            GEYEWVHKP EMDTSRR+F L
Sbjct: 355 YGEYEWVHKPREMDTSRRKFHL 349

[Close]

BLAST of Moc08g32780 vs. ExPASy Swiss-Prot
Match: Q9H9Y2 (Ribosome production factor 1 OS=Homo sapiens OX=9606 GN=RPF1 PE=1 SV=2)

HSP 1 Score: 275.0 bits (702), Expect = 1.1e-72
Identity = 157/322 (48.76%), Postives = 204/322 (63.35%), Query Frame = 0


Query: 14  SMIKNKEKRKEVHANLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREV 73
           S IKNK++R  +    KQQ++ EK   AK +   E++A  LG++ PP+ +P+TI+N R  
Sbjct: 55  SEIKNKQRRHLMFTRWKQQQRKEK-LAAKKKLKKEREA--LGDKAPPKPVPKTIDNQRVY 114

Query: 74  DETVCKPDDEELFAGNDADEFSSIIKRHTLPKVLITTCRFNSSIGPSFISELLSVIPNAH 133
           DET   P+DEE+      DEF+S   + T PK+LITT             +L +VIPN+H
Sbjct: 115 DETTVDPNDEEVAYDEATDEFASYFNKQTSPKILITTSDRPHGRTVRLCEQLSTVIPNSH 174

Query: 134 YYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKD 193
            Y R    LKKII    A+DFT L+V++  R+  +GL++  LP GPTAHFK+S+V LRK+
Sbjct: 175 VYYRRGLALKKIIPQCIARDFTDLIVINEDRKTPNGLILSHLPNGPTAHFKMSSVRLRKE 234

Query: 194 IKNHG-NPTSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFR 253
           IK  G +PT H PE++L NFTTRLG  +GR+  SLFP +P F GR+V TFHNQRD++FFR
Sbjct: 235 IKRRGKDPTEHIPEIILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVATFHNQRDYIFFR 294

Query: 254 HHRYIFDSKENKKEADSKSNSKDAKGEKVPQQKVIARLQECGPRFTMKLISLQHGTFDSK 313
            HRYIF S++                           +QE GPRFT+KL SLQ GTFDSK
Sbjct: 295 FHRYIFRSEKK------------------------VGIQELGPRFTLKLRSLQKGTFDSK 349

Query: 314 GGEYEWVHKP-EMDTSRRRFFL 334
            GEYEWVHKP EMDTSRR+F L
Sbjct: 355 YGEYEWVHKPREMDTSRRKFHL 349

[Close]

BLAST of Moc08g32780 vs. ExPASy Swiss-Prot
Match: Q7TND5 (Ribosome production factor 1 OS=Mus musculus OX=10090 GN=Rpf1 PE=2 SV=2)

HSP 1 Score: 275.0 bits (702), Expect = 1.1e-72
Identity = 157/322 (48.76%), Postives = 204/322 (63.35%), Query Frame = 0


Query: 14  SMIKNKEKRKEVHANLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREV 73
           S IKNK++R  +    KQQ++ EK   AK +   E++A  LG++ PP+ +P+TI+N R  
Sbjct: 55  SEIKNKQRRHLMFTRWKQQQRKEK-LAAKKKLKKEREA--LGDKAPPKPVPKTIDNQRVY 114

Query: 74  DETVCKPDDEELFAGNDADEFSSIIKRHTLPKVLITTCRFNSSIGPSFISELLSVIPNAH 133
           DET   P+DEE+      DEF+S   R T PK+LITT             +L +VIP++H
Sbjct: 115 DETTVDPNDEEVAYDEATDEFASYFNRQTSPKILITTSDRPHGRTVRLCEQLSTVIPDSH 174

Query: 134 YYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKD 193
            Y R    LKKII    A+DFT L+V++  R+  +GL++  LP GPTAHFK+S+V LRK+
Sbjct: 175 VYYRRGLALKKIIPQCIARDFTDLIVINEDRKTPNGLILSHLPNGPTAHFKMSSVRLRKE 234

Query: 194 IKNHG-NPTSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFR 253
           IK  G +PT H PE++L NFTTRLG  +GR+  SLFP +P F GR+V TFHNQRD++FFR
Sbjct: 235 IKRRGKDPTEHVPEIILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVATFHNQRDYIFFR 294

Query: 254 HHRYIFDSKENKKEADSKSNSKDAKGEKVPQQKVIARLQECGPRFTMKLISLQHGTFDSK 313
            HRYIF S++                           +QE GPRFT+KL SLQ GTFDSK
Sbjct: 295 FHRYIFKSEKK------------------------VGIQELGPRFTLKLRSLQKGTFDSK 349

Query: 314 GGEYEWVHKP-EMDTSRRRFFL 334
            GEYEWVHKP EMDTSRR+F L
Sbjct: 355 YGEYEWVHKPREMDTSRRKFHL 349

[Close]

BLAST of Moc08g32780 vs. ExPASy Swiss-Prot
Match: Q6IQU6 (Ribosome production factor 1 OS=Danio rerio OX=7955 GN=rpf1 PE=2 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 7.2e-72
Identity = 157/322 (48.76%), Postives = 205/322 (63.66%), Query Frame = 0


Query: 14  SMIKNKEKRKEVHANLKQQKKLEKRKRAKARDASEKQALELGEEPPPRMIPRTIENTREV 73
           S IKNK++R  +   LK++K+ +KR   K +   E++AL+  ++ PP+ +P+TIEN R  
Sbjct: 36  SEIKNKQRRHTMFLKLKEEKR-KKRMELKKKKKKERKALD--DKAPPKEVPKTIENQRIY 95

Query: 74  DETVCKPDDEELFAGNDADEFSSIIKRHTLPKVLITTCRFNSSIGPSFISELLSVIPNAH 133
           DET   P+DEE+      DEFS+   R T PKVLITT          F  +L +VIP+A+
Sbjct: 96  DETTVNPEDEEVAFDEGTDEFSAYFNRLTNPKVLITTSDRPRGRTVRFCDQLATVIPHAY 155

Query: 134 YYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKD 193
            Y R    LKK+I    ++ FT LMV++  R+  +G+++  LP+GPTAHFK+S+V LRK+
Sbjct: 156 VYYRRGLALKKVIPQCISRGFTYLMVINEDRKVPNGMVLCHLPDGPTAHFKVSSVRLRKE 215

Query: 194 IKNHG-NPTSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFR 253
           +K  G NPT H PE++L NFTTRLG  +GRL  +LFP DP F GR+V TFHNQRDF+FFR
Sbjct: 216 MKRRGKNPTEHSPEVILNNFTTRLGHSIGRLFAALFPHDPQFVGRQVATFHNQRDFIFFR 275

Query: 254 HHRYIFDSKENKKEADSKSNSKDAKGEKVPQQKVIARLQECGPRFTMKLISLQHGTFDSK 313
            HRYIF  K  KK                        +QE GPRFT+KL SLQ GTFDSK
Sbjct: 276 FHRYIF--KNEKK----------------------VGIQELGPRFTLKLRSLQKGTFDSK 330

Query: 314 GGEYEWVHK-PEMDTSRRRFFL 334
            GEYEWVHK  EMD+SRR+F L
Sbjct: 336 FGEYEWVHKRHEMDSSRRKFHL 330

[Close]

BLAST of Moc08g32780 vs. ExPASy TrEMBL
Match: A0A6J1DT48 (ribosome production factor 1-like OS=Momordica charantia OX=3673 GN=LOC111022909 PE=4 SV=1)

HSP 1 Score: 658.3 bits (1697), Expect = 1.7e-185
Identity = 333/333 (100.00%), Postives = 333/333 (100.00%), Query Frame = 0


Query: 1   MGEEKKNKRDIIPSMIKNKEKRKEVHANLKQQKKLEKRKRAKARDASEKQALELGEEPPP 60
           MGEEKKNKRDIIPSMIKNKEKRKEVHANLKQQKKLEKRKRAKARDASEKQALELGEEPPP
Sbjct: 1   MGEEKKNKRDIIPSMIKNKEKRKEVHANLKQQKKLEKRKRAKARDASEKQALELGEEPPP 60

Query: 61  RMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRHTLPKVLITTCRFNSSIGPS 120
           RMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRHTLPKVLITTCRFNSSIGPS
Sbjct: 61  RMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRHTLPKVLITTCRFNSSIGPS 120

Query: 121 FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPT 180
           FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPT
Sbjct: 121 FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPT 180

Query: 181 AHFKISNVVLRKDIKNHGNPTSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVV 240
           AHFKISNVVLRKDIKNHGNPTSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVV
Sbjct: 181 AHFKISNVVLRKDIKNHGNPTSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVV 240

Query: 241 TFHNQRDFVFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPQQKVIARLQECGPRFTMK 300
           TFHNQRDFVFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPQQKVIARLQECGPRFTMK
Sbjct: 241 TFHNQRDFVFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPQQKVIARLQECGPRFTMK 300

Query: 301 LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL 334
           LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Sbjct: 301 LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL 333

[Close]

BLAST of Moc08g32780 vs. ExPASy TrEMBL
Match: A0A6J1DPH5 (ribosome production factor 1-like OS=Momordica charantia OX=3673 GN=LOC111023106 PE=4 SV=1)

HSP 1 Score: 655.2 bits (1689), Expect = 1.4e-184
Identity = 330/333 (99.10%), Postives = 333/333 (100.00%), Query Frame = 0


Query: 1   MGEEKKNKRDIIPSMIKNKEKRKEVHANLKQQKKLEKRKRAKARDASEKQALELGEEPPP 60
           MGEEKKNKRDIIPSMIKNKEKRKEVHANLKQQKKLEKRKRAKARDASEKQALELGEEPPP
Sbjct: 1   MGEEKKNKRDIIPSMIKNKEKRKEVHANLKQQKKLEKRKRAKARDASEKQALELGEEPPP 60

Query: 61  RMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRHTLPKVLITTCRFNSSIGPS 120
           RMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRHTLPKVLITTCRFNS+IGPS
Sbjct: 61  RMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRHTLPKVLITTCRFNSTIGPS 120

Query: 121 FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPT 180
           FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPT
Sbjct: 121 FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPT 180

Query: 181 AHFKISNVVLRKDIKNHGNPTSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVV 240
           AHFKISNVVLRKDIKNHGNPTSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVV
Sbjct: 181 AHFKISNVVLRKDIKNHGNPTSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVV 240

Query: 241 TFHNQRDFVFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPQQKVIARLQECGPRFTMK 300
           TFHNQRDF+FFRHHRYIFDSKENKKEADSKSNSKDAKGEKVP+QKVIARLQECGPRFTMK
Sbjct: 241 TFHNQRDFIFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPKQKVIARLQECGPRFTMK 300

Query: 301 LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL 334
           LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Sbjct: 301 LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL 333

[Close]

BLAST of Moc08g32780 vs. ExPASy TrEMBL
Match: A0A1S3B854 (ribosome production factor 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486828 PE=4 SV=1)

HSP 1 Score: 619.8 bits (1597), Expect = 6.7e-174
Identity = 315/333 (94.59%), Postives = 321/333 (96.40%), Query Frame = 0


Query: 1   MGEEKKNKRDIIPSMIKNKEKRKEVHANLKQQKKLEKRKRAKARDASEKQALELGEEPPP 60
           MGEEKKNK  IIPSMIKNKEKR EVHANLK QKKLEKRKRAKARDA+EKQALELGEE PP
Sbjct: 1   MGEEKKNK-GIIPSMIKNKEKRAEVHANLKHQKKLEKRKRAKARDAAEKQALELGEELPP 60

Query: 61  RMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRHTLPKVLITTCRFNSSIGPS 120
           R IPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR  LPKVLITTCRFNS+IGP+
Sbjct: 61  RKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKVLITTCRFNSTIGPA 120

Query: 121 FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPT 180
           FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPT
Sbjct: 121 FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPT 180

Query: 181 AHFKISNVVLRKDIKNHGNPTSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVV 240
           AHFKISNVVLRKDIKNHGNPT H+PELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVV
Sbjct: 181 AHFKISNVVLRKDIKNHGNPTGHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVV 240

Query: 241 TFHNQRDFVFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPQQKVIARLQECGPRFTMK 300
           TFHNQRDF+FFRHHRYIF+SKENKKEADSK  SKD KGEKVPQQKVIARLQECGPRFTMK
Sbjct: 241 TFHNQRDFIFFRHHRYIFESKENKKEADSKKKSKDTKGEKVPQQKVIARLQECGPRFTMK 300

Query: 301 LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL 334
           LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Sbjct: 301 LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL 332

[Close]

BLAST of Moc08g32780 vs. ExPASy TrEMBL
Match: A0A5A7UHC7 (Ribosome production factor 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G006030 PE=4 SV=1)

HSP 1 Score: 619.8 bits (1597), Expect = 6.7e-174
Identity = 315/333 (94.59%), Postives = 321/333 (96.40%), Query Frame = 0


Query: 1   MGEEKKNKRDIIPSMIKNKEKRKEVHANLKQQKKLEKRKRAKARDASEKQALELGEEPPP 60
           MGEEKKNK  IIPSMIKNKEKR EVHANLK QKKLEKRKRAKARDA+EKQALELGEE PP
Sbjct: 1   MGEEKKNK-GIIPSMIKNKEKRAEVHANLKHQKKLEKRKRAKARDAAEKQALELGEELPP 60

Query: 61  RMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRHTLPKVLITTCRFNSSIGPS 120
           R IPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR  LPKVLITTCRFNS+IGP+
Sbjct: 61  RKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKVLITTCRFNSTIGPA 120

Query: 121 FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPT 180
           FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPT
Sbjct: 121 FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPT 180

Query: 181 AHFKISNVVLRKDIKNHGNPTSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVV 240
           AHFKISNVVLRKDIKNHGNPT H+PELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVV
Sbjct: 181 AHFKISNVVLRKDIKNHGNPTGHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVV 240

Query: 241 TFHNQRDFVFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPQQKVIARLQECGPRFTMK 300
           TFHNQRDF+FFRHHRYIF+SKENKKEADSK  SKD KGEKVPQQKVIARLQECGPRFTMK
Sbjct: 241 TFHNQRDFIFFRHHRYIFESKENKKEADSKKKSKDTKGEKVPQQKVIARLQECGPRFTMK 300

Query: 301 LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL 334
           LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Sbjct: 301 LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL 332

[Close]

BLAST of Moc08g32780 vs. ExPASy TrEMBL
Match: A0A0A0LH42 (Brix domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G814330 PE=4 SV=1)

HSP 1 Score: 611.3 bits (1575), Expect = 2.4e-171
Identity = 309/333 (92.79%), Postives = 319/333 (95.80%), Query Frame = 0


Query: 1   MGEEKKNKRDIIPSMIKNKEKRKEVHANLKQQKKLEKRKRAKARDASEKQALELGEEPPP 60
           MGEEKKNK  I+PS IKNKEKR EVHANLK QKKLEKRKRAKARDA+EKQALELGEE PP
Sbjct: 1   MGEEKKNK-VIVPSTIKNKEKRAEVHANLKHQKKLEKRKRAKARDAAEKQALELGEELPP 60

Query: 61  RMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRHTLPKVLITTCRFNSSIGPS 120
           R IPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR  LPK+LITTCRFNS+IGP+
Sbjct: 61  RKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKILITTCRFNSTIGPA 120

Query: 121 FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPT 180
           FISELLSVIPNAHYYKRGTNDLKKI+EYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPT
Sbjct: 121 FISELLSVIPNAHYYKRGTNDLKKIVEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPT 180

Query: 181 AHFKISNVVLRKDIKNHGNPTSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVV 240
           AHFKISNVVLRK+IKNHGNPT H+PELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVV
Sbjct: 181 AHFKISNVVLRKEIKNHGNPTGHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVV 240

Query: 241 TFHNQRDFVFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPQQKVIARLQECGPRFTMK 300
           TFHNQRDF+FFRHHRYIF+SKENKKEADSK  SK  KGEKVPQQKVIARLQECGPRFTMK
Sbjct: 241 TFHNQRDFIFFRHHRYIFESKENKKEADSKKKSKGTKGEKVPQQKVIARLQECGPRFTMK 300

Query: 301 LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL 334
           LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Sbjct: 301 LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL 332

[Close]

BLAST of Moc08g32780 vs. TAIR 10
Match: AT4G01560.1 (Ribosomal RNA processing Brix domain protein )

HSP 1 Score: 484.6 bits (1246), Expect = 6.5e-137
Identity = 240/332 (72.29%), Postives = 282/332 (84.94%), Query Frame = 0


Query: 2   GEEKKNKRDIIPSMIKNKEKRKEVHANLKQQKKLEKRKRAKARDASEKQALELGEEPPPR 61
           G EK+N   I+PSMIKNK+KR +V+A  K +KKLEK+K+ +ARDA+EK+ALELGEEPP +
Sbjct: 27  GGEKRNV--ILPSMIKNKDKRSKVYAKQKHEKKLEKQKKIRARDAAEKRALELGEEPPQK 86

Query: 62  MIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRHTLPKVLITTCRFNSSIGPSF 121
           MIP+TIENTRE DETVC+PDDEELFA  DADEF+ +++R   PKVL+TTCRFNS+ GP+ 
Sbjct: 87  MIPKTIENTRESDETVCRPDDEELFADIDADEFNPVLRREIAPKVLLTTCRFNSTRGPAL 146

Query: 122 ISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTA 181
           ISELLSVIPN+HY KRGT DLKKI+EYA  KDFTSL+VVHT+RR+ D LLIIGLP GPTA
Sbjct: 147 ISELLSVIPNSHYQKRGTYDLKKIVEYATKKDFTSLIVVHTNRREPDALLIIGLPNGPTA 206

Query: 182 HFKISNVVLRKDIKNHGNPTSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVT 241
           HFK+SN+VLRKDIKNHGNPTSH+PELVL NFTTRLG RVGR  QSLFP DPNFRGRRVVT
Sbjct: 207 HFKLSNLVLRKDIKNHGNPTSHQPELVLNNFTTRLGNRVGRFFQSLFPPDPNFRGRRVVT 266

Query: 242 FHNQRDFVFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPQQKVIARLQECGPRFTMKL 301
           FHNQRDF+FFRHHRYIF++KE             +K +K  ++ +  RLQECGPRFT+KL
Sbjct: 267 FHNQRDFIFFRHHRYIFETKE-------------SKSDKGKEETIKPRLQECGPRFTLKL 326

Query: 302 ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL 334
           ++LQHGTFD+KGGE+EWVHKPEMDTSRRRFFL
Sbjct: 327 VTLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 343

[Close]

BLAST of Moc08g32780 vs. TAIR 10
Match: AT1G63780.1 (Ribosomal RNA processing Brix domain protein )

HSP 1 Score: 156.8 bits (395), Expect = 3.1e-38
Identity = 91/233 (39.06%), Postives = 130/233 (55.79%), Query Frame = 0


Query: 104 PKVLITTCRFNSSIGPSFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTS 163
           PK+L+TT R  S+    F  EL  V PN+    RG+  + +IIE A + DFT +++VH  
Sbjct: 83  PKILLTTSRNPSAPLIRFTKELKFVFPNSQRINRGSQVISEIIETARSHDFTDVILVHEH 142

Query: 164 RRKLDGLLIIGLPEGPTAHFKISNVVLRKDI---KNHGNPTSHEPELVLTNFTTRLGLRV 223
           R   DGL+I  LP GPTA+F + NVV R DI   K+ G      P L+  NFTT++G RV
Sbjct: 143 RGVPDGLIISHLPFGPTAYFGLLNVVTRHDISDKKSIGKMPEQYPHLIFNNFTTQMGQRV 202

Query: 224 GRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIFDSKENKKEADSKSNSKDAKGEK 283
           G +++ +FP  P    +R+VTF NQ D++ FR+H Y                    KGE 
Sbjct: 203 GNILKHIFPA-PKLDAKRIVTFSNQSDYISFRNHVY-------------------DKGEG 262

Query: 284 VPQQKVIARLQECGPRFTMKLISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL 334
            P+      L+E GPRF ++L  ++ GT +    E EWV +P M+TS++R F+
Sbjct: 263 GPKS---IELKEIGPRFELRLYQVKLGTVEQNEAEIEWVIRPYMNTSKKRKFI 292

The following BLAST results are available for this feature:

BLAST of Moc08g32780 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022155906.1	3.5e-185	100.00	ribosome production factor 1-like [Momordica charantia]	[more]
XP_022156150.1	3.0e-184	99.10	ribosome production factor 1-like [Momordica charantia] >XP_022156151.1 ribosome...	[more]
XP_008443155.1	1.4e-173	94.59	PREDICTED: ribosome production factor 1 isoform X1 [Cucumis melo] >XP_008443156....	[more]
XP_038906205.1	9.0e-173	93.69	ribosome production factor 1 [Benincasa hispida]	[more]
XP_031737500.1	5.0e-171	92.79	ribosome production factor 1 [Cucumis sativus] >KGN59366.1 hypothetical protein ...	[more]

BLAST of Moc08g32780 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8AVP1	1.0e-73	47.85	Ribosome production factor 1 OS=Xenopus laevis OX=8355 GN=rpf1 PE=2 SV=1	[more]
Q5R631	5.0e-73	49.07	Ribosome production factor 1 OS=Pongo abelii OX=9601 GN=RPF1 PE=2 SV=1	[more]
Q9H9Y2	1.1e-72	48.76	Ribosome production factor 1 OS=Homo sapiens OX=9606 GN=RPF1 PE=1 SV=2	[more]
Q7TND5	1.1e-72	48.76	Ribosome production factor 1 OS=Mus musculus OX=10090 GN=Rpf1 PE=2 SV=2	[more]
Q6IQU6	7.2e-72	48.76	Ribosome production factor 1 OS=Danio rerio OX=7955 GN=rpf1 PE=2 SV=1	[more]

BLAST of Moc08g32780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DT48	1.7e-185	100.00	ribosome production factor 1-like OS=Momordica charantia OX=3673 GN=LOC111022909...	[more]
A0A6J1DPH5	1.4e-184	99.10	ribosome production factor 1-like OS=Momordica charantia OX=3673 GN=LOC111023106...	[more]
A0A1S3B854	6.7e-174	94.59	ribosome production factor 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486828 ...	[more]
A0A5A7UHC7	6.7e-174	94.59	Ribosome production factor 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A0A0LH42	2.4e-171	92.79	Brix domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G814330 PE=4 S...	[more]

BLAST of Moc08g32780 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G01560.1	6.5e-137	72.29	Ribosomal RNA processing Brix domain protein	[more]
AT1G63780.1	3.1e-38	39.06	Ribosomal RNA processing Brix domain protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 26..46
None	No IPR available	GENE3D	3.40.50.10480		coord: 104..300 e-value: 9.1E-38 score: 131.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 262..283
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..64
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 262..282
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 41..55
None	No IPR available	PANTHER	PTHR22734:SF3	RIBOSOME PRODUCTION FACTOR 1	coord: 4..333
None	No IPR available	SUPERFAMILY	52954	Class II aaRS ABD-related	coord: 104..307
IPR007109	Brix domain	SMART	SM00879	Brix_2	coord: 107..304 e-value: 2.2E-57 score: 206.6
IPR007109	Brix domain	PFAM	PF04427	Brix	coord: 120..302 e-value: 2.3E-32 score: 112.7
IPR007109	Brix domain	PROSITE	PS50833	BRIX	coord: 104..310 score: 41.707073
IPR044281	U3 snoRNP protein/Ribosome production factor 1	PANTHER	PTHR22734	U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4	coord: 4..333

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc08g32780.1	Moc08g32780.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000460	maturation of 5.8S rRNA
biological_process	GO:0000470	maturation of LSU-rRNA
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0030687	preribosome, large subunit precursor
molecular_function	GO:0042134	rRNA primary transcript binding
molecular_function	GO:0019843	rRNA binding