Moc08g32700 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc08g32700
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	FHA domain-containing protein
Location	chr8: 23738671 .. 23739681 (+)
RNA-Seq Expression	Moc08g32700
Synteny	Moc08g32700

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTTCTCTTATGGCTAGCATTAATTTCGAGTGGCCCTCCTCAGATGATGGGTCATCGTCACACCCTTCGTCAGAATCTCAATCCTATCGTCCGTTTTGGGTGGATAACTCCACTCTTATGGCGAGGGACCTGCGTCGCTTGCGTTCGAAATACCGTATCCCGGATTCGGTTAGCCTTCGTCTTCCGAATCTGGGAGAGAGTATTGATGGTTCTTTCCAGGTGAAGTAGTATTTTATGCCTGATGTTCCAATTTGGAGTCCGCCTACCGTTGCCTCTTTTTCTTCAGAACTTTTTAGCTTTTAATCAAGTAGCTCCTTCCCAAATCGTCCCGAATGGGTGATCTACTTTGATCAGTTGCTTTATTTTGTGGTCGTAGCTCAGGGGCGAGCAGCCTCTAACCTCCGCGGACTTTATGTCGCTTTATTACCTCAAACACAGCCCCGAGGATAACTTTCATTTTTACGTTAGTTCTCGAAACCAAGTTCTTGTTATGGGTCCCTCCTTAGTGAAGCATTGGAAGAATGAATGGTTCTTTGTCAGTGGTGACTGGTTAGCCCGTGACGAGAGAGAGTTGTATTTTCCCGTCCCGACCGAGTGTAGGGAGTTGGGTAAGTAGCTTCCGAGCTCTATCGGGACTTTCGTAGAAATCGATTGTGATATTACTTTTCCTTGTTGGTAGTTTCCTGCAATTGTGAGCTTACTGTCGAGGCGTCCACTTTTTTTTATGATACTGTTATCCAGCTACCAGATATCGAGTGTTGGGGCCCAGATTTGGTTACGGAGCAAAACTTAGTGGATTTTGGCTTGGCTCTCCCACATAACCCTCTAGGTTTTTGTCGAAATCTTCTTTTCATTTTGCATGAACGTCGCTTTTTACCCTTATCTCTATTTGTAGAAATGTCGAGACAGAGTGCTTCCTTGTATGAAAGAGAACGCCGTCGAAACACCCGAGGTTTGGGGGCCGGCTCTAGTCGGGCTTCAGATATCGAAGTGACTGATTTGGCCTAG

mRNA sequence

ATGTTTTCTCTTATGGCTAGCATTAATTTCGAGTGGCCCTCCTCAGATGATGGGTCATCGTCACACCCTTCGTCAGAATCTCAATCCTATCGTCCGTTTTGGGTGGATAACTCCACTCTTATGGCGAGGGACCTGCGTCGCTTGCGTTCGAAATACCGTATCCCGGATTCGGTTAGCCTTCGTCTTCCGAATCTGGGAGAGAGTATTGATGGTTCTTTCCAGCTCAGGGGCGAGCAGCCTCTAACCTCCGCGGACTTTATGTCGCTTTATTACCTCAAACACAGCCCCGAGGATAACTTTCATTTTTACGTTAGTTCTCGAAACCAAGTTCTTGTTATGGGTCCCTCCTTAGTGAAGCATTGGAAGAATGAATGGTTCTTTGTCAGTGGTGACTGGTTAGCCCGTGACGAGAGAGAGTTGTATTTTCCCGTCCCGACCGAGTGTAGGGAGTTGGTTTCCTGCAATTGTGAGCTTACTGTCGAGGCGTCCACTTTTTTTTATGATACTGTTATCCAGCTACCAGATATCGAGTGTTGGGGCCCAGATTTGGTTACGGAGCAAAACTTAGTGGATTTTGGCTTGGCTCTCCCACATAACCCTCTAGAAATGTCGAGACAGAGTGCTTCCTTGTATGAAAGAGAACGCCGTCGAAACACCCGAGGTTTGGGGGCCGGCTCTAGTCGGGCTTCAGATATCGAAGTGACTGATTTGGCCTAG

Coding sequence (CDS)

ATGTTTTCTCTTATGGCTAGCATTAATTTCGAGTGGCCCTCCTCAGATGATGGGTCATCGTCACACCCTTCGTCAGAATCTCAATCCTATCGTCCGTTTTGGGTGGATAACTCCACTCTTATGGCGAGGGACCTGCGTCGCTTGCGTTCGAAATACCGTATCCCGGATTCGGTTAGCCTTCGTCTTCCGAATCTGGGAGAGAGTATTGATGGTTCTTTCCAGCTCAGGGGCGAGCAGCCTCTAACCTCCGCGGACTTTATGTCGCTTTATTACCTCAAACACAGCCCCGAGGATAACTTTCATTTTTACGTTAGTTCTCGAAACCAAGTTCTTGTTATGGGTCCCTCCTTAGTGAAGCATTGGAAGAATGAATGGTTCTTTGTCAGTGGTGACTGGTTAGCCCGTGACGAGAGAGAGTTGTATTTTCCCGTCCCGACCGAGTGTAGGGAGTTGGTTTCCTGCAATTGTGAGCTTACTGTCGAGGCGTCCACTTTTTTTTATGATACTGTTATCCAGCTACCAGATATCGAGTGTTGGGGCCCAGATTTGGTTACGGAGCAAAACTTAGTGGATTTTGGCTTGGCTCTCCCACATAACCCTCTAGAAATGTCGAGACAGAGTGCTTCCTTGTATGAAAGAGAACGCCGTCGAAACACCCGAGGTTTGGGGGCCGGCTCTAGTCGGGCTTCAGATATCGAAGTGACTGATTTGGCCTAG

Protein sequence

MFSLMASINFEWPSSDDGSSSHPSSESQSYRPFWVDNSTLMARDLRRLRSKYRIPDSVSLRLPNLGESIDGSFQLRGEQPLTSADFMSLYYLKHSPEDNFHFYVSSRNQVLVMGPSLVKHWKNEWFFVSGDWLARDERELYFPVPTECRELVSCNCELTVEASTFFYDTVIQLPDIECWGPDLVTEQNLVDFGLALPHNPLEMSRQSASLYERERRRNTRGLGAGSSRASDIEVTDLA

Homology

[Close]

BLAST of Moc08g32700 vs. NCBI nr
Match: XP_022156747.1 (uncharacterized protein LOC111023586 [Momordica charantia])

HSP 1 Score: 129.8 bits (325), Expect = 3.1e-26
Identity = 69/85 (81.18%), Postives = 71/85 (83.53%), Query Frame = 0


Query: 152  VSCNCELTVEASTFFYDTVIQLPDIECWGPDLVTEQNLVDFGLALPHNPLEMSRQSASLY 211
            VS NCELT EAST FY TVIQLPDIE WGPDLVTEQNLVDFGLALPHNP EM R+SASLY
Sbjct: 1005 VSRNCELTNEAST-FYHTVIQLPDIERWGPDLVTEQNLVDFGLALPHNPPEMLRRSASLY 1064

Query: 212  ERERRRNTRGLGAGSSRASDIEVTD 237
            ERE RR+ R L AGS RASDIE  D
Sbjct: 1065 EREHRRDARSLEAGSGRASDIEGLD 1088

[Close]

BLAST of Moc08g32700 vs. NCBI nr
Match: XP_038891101.1 (uncharacterized protein LOC120080500 [Benincasa hispida])

HSP 1 Score: 64.3 bits (155), Expect = 1.6e-06
Identity = 40/129 (31.01%), Postives = 61/129 (47.29%), Query Frame = 0


Query: 86  FMSLYYLKHSPEDNFHF-YVSSRNQVLVMGPSLVKHWKNEWFFVSGDWLARDERELYFPV 145
           F+SLY +  S +    F Y+ +  + L+   S VKHW   WFF  GDWL+ DE  + + V
Sbjct: 6   FLSLYQINRSSKFKDCFCYIVAHKKALMCNVSSVKHWTEHWFFARGDWLSTDEAGMCYVV 65

Query: 146 PTECRELVSCNCELTVEASTFFYDTVIQLPDIEC-WGPDLVTEQNLVDFGLALPHNPLEM 205
           PT  R+ V      +  A        IQ  + E   G + ++++NL+  GL       E+
Sbjct: 66  PTRFRDFVPRKFSCSTIARNL--ARAIQSSNKETKHGSNFISQENLILVGLTHSEFLTEL 125

Query: 206 SRQSASLYE 213
            R  A L +
Sbjct: 126 VRIRAKLVQ 132

[Close]

BLAST of Moc08g32700 vs. NCBI nr
Match: XP_022159252.1 (uncharacterized protein LOC111025665 [Momordica charantia])

HSP 1 Score: 60.1 bits (144), Expect = 3.0e-05
Identity = 41/108 (37.96%), Postives = 60/108 (55.56%), Query Frame = 0


Query: 111 LVMGPSLVKHWKNEWFFVSGDWLARDER-ELYFPVPTECRELVSCNCELTVEASTFFYDT 170
           +V GP+ +K W  +WFF SG+WLA+DE    +F VPT    LVS   +L  E +   +DT
Sbjct: 10  IVKGPTSIKGWVGKWFFASGEWLAKDESGRAFFDVPTRFGNLVS--IKLIPELAQATFDT 69

Query: 171 VIQLPD---IECWGPDLVTEQNLVDFGLALPHNPL----EMSRQSASL 211
           +    D    +     LVT++ L++ GL L +NPL    E SR ++ L
Sbjct: 70  LKHYKDHFPRDRKIVTLVTDKLLLESGL-LDYNPLVRLIEASRPNSEL 114

[Close]

BLAST of Moc08g32700 vs. NCBI nr
Match: GFY95616.1 (hypothetical protein Acr_10g0010010 [Actinidia rufa])

HSP 1 Score: 60.1 bits (144), Expect = 3.0e-05
Identity = 35/103 (33.98%), Postives = 55/103 (53.40%), Query Frame = 0


Query: 44  DLRRLRSKYRIPDSVSLRLPNLGESIDGSFQLRGEQPLTSADFMSLYYLKHSPEDNFHFY 103
           DL +LR KY  P  V LR+P  GE+I  +    G++ ++  +F  LY L   P+  ++++
Sbjct: 5   DLDKLRKKYSSPPKVQLRIPGEGETILSTGP--GKRHMSCEEFRCLYSLSSLPDSGWYYF 64

Query: 104 VSSRNQVLVM-GPSLVKHWKNEWFFVSGDWLARDERELYFPVP 146
            +  +  L+   PS VK WK  +FF SG     DE E +  +P
Sbjct: 65  KARPDMNLLRESPSNVKGWKKRFFFASG-----DEWEFFLSMP 100

[Close]

BLAST of Moc08g32700 vs. NCBI nr
Match: XP_022158122.1 (uncharacterized protein LOC111024680 [Momordica charantia])

HSP 1 Score: 59.3 bits (142), Expect = 5.2e-05
Identity = 42/123 (34.15%), Postives = 66/123 (53.66%), Query Frame = 0


Query: 102 FYVSSRNQV--LVMGPSLVKHWKNEWFFVSGDWLARDER-ELYFPVPTECRELVSCNCEL 161
           FY+ +R     +V GP+ +K W  +WF+ SG+WLA+DE    +F VPT    LVS     
Sbjct: 77  FYMCARKGAGGIVKGPTSIKGWVRKWFYASGEWLAKDESGRSFFDVPTRFGNLVS--IRP 136

Query: 162 TVEASTFFYDTVIQLPDIECWG---PDLVTEQNLVDFGLALPHN----PLEMSRQSASLY 215
             E +   +DT+    +    G     LVT++ L++ GL L +N    P+E SR ++ L 
Sbjct: 137 VPELTQASFDTLKYYKERFPRGRKVGTLVTDELLLESGL-LDYNPAVRPIESSRPNSELG 196

[Close]

BLAST of Moc08g32700 vs. ExPASy TrEMBL
Match: A0A6J1DSS1 (uncharacterized protein LOC111023586 OS=Momordica charantia OX=3673 GN=LOC111023586 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 1.5e-26
Identity = 69/85 (81.18%), Postives = 71/85 (83.53%), Query Frame = 0


Query: 152  VSCNCELTVEASTFFYDTVIQLPDIECWGPDLVTEQNLVDFGLALPHNPLEMSRQSASLY 211
            VS NCELT EAST FY TVIQLPDIE WGPDLVTEQNLVDFGLALPHNP EM R+SASLY
Sbjct: 1005 VSRNCELTNEAST-FYHTVIQLPDIERWGPDLVTEQNLVDFGLALPHNPPEMLRRSASLY 1064

Query: 212  ERERRRNTRGLGAGSSRASDIEVTD 237
            ERE RR+ R L AGS RASDIE  D
Sbjct: 1065 EREHRRDARSLEAGSGRASDIEGLD 1088

[Close]

BLAST of Moc08g32700 vs. ExPASy TrEMBL
Match: A0A7J0FB15 (Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_10g0010010 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 1.5e-05
Identity = 35/103 (33.98%), Postives = 55/103 (53.40%), Query Frame = 0


Query: 44  DLRRLRSKYRIPDSVSLRLPNLGESIDGSFQLRGEQPLTSADFMSLYYLKHSPEDNFHFY 103
           DL +LR KY  P  V LR+P  GE+I  +    G++ ++  +F  LY L   P+  ++++
Sbjct: 5   DLDKLRKKYSSPPKVQLRIPGEGETILSTGP--GKRHMSCEEFRCLYSLSSLPDSGWYYF 64

Query: 104 VSSRNQVLVM-GPSLVKHWKNEWFFVSGDWLARDERELYFPVP 146
            +  +  L+   PS VK WK  +FF SG     DE E +  +P
Sbjct: 65  KARPDMNLLRESPSNVKGWKKRFFFASG-----DEWEFFLSMP 100

[Close]

BLAST of Moc08g32700 vs. ExPASy TrEMBL
Match: A0A6J1DZB3 (uncharacterized protein LOC111025665 OS=Momordica charantia OX=3673 GN=LOC111025665 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 1.5e-05
Identity = 41/108 (37.96%), Postives = 60/108 (55.56%), Query Frame = 0


Query: 111 LVMGPSLVKHWKNEWFFVSGDWLARDER-ELYFPVPTECRELVSCNCELTVEASTFFYDT 170
           +V GP+ +K W  +WFF SG+WLA+DE    +F VPT    LVS   +L  E +   +DT
Sbjct: 10  IVKGPTSIKGWVGKWFFASGEWLAKDESGRAFFDVPTRFGNLVS--IKLIPELAQATFDT 69

Query: 171 VIQLPD---IECWGPDLVTEQNLVDFGLALPHNPL----EMSRQSASL 211
           +    D    +     LVT++ L++ GL L +NPL    E SR ++ L
Sbjct: 70  LKHYKDHFPRDRKIVTLVTDKLLLESGL-LDYNPLVRLIEASRPNSEL 114

[Close]

BLAST of Moc08g32700 vs. ExPASy TrEMBL
Match: A0A6J1DWD2 (uncharacterized protein LOC111024680 OS=Momordica charantia OX=3673 GN=LOC111024680 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 2.5e-05
Identity = 42/123 (34.15%), Postives = 66/123 (53.66%), Query Frame = 0


Query: 102 FYVSSRNQV--LVMGPSLVKHWKNEWFFVSGDWLARDER-ELYFPVPTECRELVSCNCEL 161
           FY+ +R     +V GP+ +K W  +WF+ SG+WLA+DE    +F VPT    LVS     
Sbjct: 77  FYMCARKGAGGIVKGPTSIKGWVRKWFYASGEWLAKDESGRSFFDVPTRFGNLVS--IRP 136

Query: 162 TVEASTFFYDTVIQLPDIECWG---PDLVTEQNLVDFGLALPHN----PLEMSRQSASLY 215
             E +   +DT+    +    G     LVT++ L++ GL L +N    P+E SR ++ L 
Sbjct: 137 VPELTQASFDTLKYYKERFPRGRKVGTLVTDELLLESGL-LDYNPAVRPIESSRPNSELG 196

[Close]

BLAST of Moc08g32700 vs. ExPASy TrEMBL
Match: A0A6J1DXS5 (uncharacterized protein LOC111025502 OS=Momordica charantia OX=3673 GN=LOC111025502 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 9.5e-05
Identity = 41/119 (34.45%), Postives = 63/119 (52.94%), Query Frame = 0


Query: 102 FYVSSRNQV--LVMGPSLVKHWKNEWFFVSGDWLARDER-ELYFPVPTECRELVSCNCEL 161
           FY+ +R     +V GP+ +K W  +WF+ SG+WLA+DE    +F VPT    LVS     
Sbjct: 170 FYMCARKGAGGIVKGPTSIKGWVRKWFYASGEWLAKDESGRSFFDVPTRFGNLVS--IRP 229

Query: 162 TVEASTFFYDTVIQLPDIECWG---PDLVTEQNLVDFGLALPHN----PLEMSRQSASL 211
             E +   +DT+    +    G     LVT++ L++ GL L +N    P+E SR ++ L
Sbjct: 230 VPELTQASFDTLKYYKERFPRGRKVGTLVTDELLLESGL-LDYNPAVRPIESSRPNSEL 285

The following BLAST results are available for this feature:

BLAST of Moc08g32700 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022156747.1	3.1e-26	81.18	uncharacterized protein LOC111023586 [Momordica charantia]	[more]
XP_038891101.1	1.6e-06	31.01	uncharacterized protein LOC120080500 [Benincasa hispida]	[more]
XP_022159252.1	3.0e-05	37.96	uncharacterized protein LOC111025665 [Momordica charantia]	[more]
GFY95616.1	3.0e-05	33.98	hypothetical protein Acr_10g0010010 [Actinidia rufa]	[more]
XP_022158122.1	5.2e-05	34.15	uncharacterized protein LOC111024680 [Momordica charantia]	[more]

BLAST of Moc08g32700 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc08g32700 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DSS1	1.5e-26	81.18	uncharacterized protein LOC111023586 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A7J0FB15	1.5e-05	33.98	Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_10g0010010 PE=4 SV=1	[more]
A0A6J1DZB3	1.5e-05	37.96	uncharacterized protein LOC111025665 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1DWD2	2.5e-05	34.15	uncharacterized protein LOC111024680 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]
A0A6J1DXS5	9.5e-05	34.45	uncharacterized protein LOC111025502 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]

BLAST of Moc08g32700 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 216..238

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc08g32700.1	Moc08g32700.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding