
Moc08g31850 (gene) Bitter gourd (OHB3-1) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGAGCAGAAGATCATCGCGTTCTAGAAACTCCGCTTCTATTTCTGCTCATATCTCTGATGACGAGATTGCCGATCTTGTTTCCAAGTTGCAGCGCCTCATCCCTGAGATTCGTAACAGGCGCTCCGATAAGGTAATCCTCTCTCTCCTTTTAGATGAAATATCGTCGTTTCGTCGCTGTCACTTCTAAAACAAAGAAGGGGAAAACAGCTGTGAAGAAGAAAGACTATTATTCTTTATTTTTGTGTATATATTTTCAAATACGTACTTCCTACCAAGCTTATTAATTTTGTCTGGCGACATGTCGGCTCGTGGGACTCGTGTTGTTCCCCATACACCAGCAATGCAGCTGAGGAGTTTTGAAAATACACAAAATTTCGCTTAATCTTTTTCAGCCCACCTTTTCCAACAAAACCACTCCTCTAAGAATGAGAAGTATTATGGCAAAATATTTTTTAAGTACAACAAATAAGACGAGAGATTCAAATTCAAAACTTCTTAACCAGAGATGTATATGAATTACAGTTGAACTACGTTCATGTTGGTCACACAACATATGACAGATCGCTATCAAACATACCCCTAGTCAAGTATTTTCTTTGGAAAGTTTTTTCTTTTTATTTTCTAATTTTTGTTTATTTTTTGGGCGTAGGTGGCAGCTTCAAAAGTGCTACAGGAAACATGCAACTACATAAGGAGTTTACATCAGGAAGTGGATGATTTAAGTGAGCGATTGTCTCAGCTTTTGGCCGCAACTGAAAACGGCAGTGCCGAGGCAGCCATTATTAGGAGTTTATTCATGTAAACGGCTTAAAACGACTCCTCTACCCCATTATACGGCGTCGTTTCCCTCGTTATTTTCATTTTGGTCACCCTTCTCTCTTTATATTTATATATATATATAATAGTATGATTAATTAGGTAGGTCTTTTGGCCAATGTATTAGGCCATTACACAAAAGGGTGCTATATCATACATATAGTGCCTCTTTTGAGCAGAGTCGGTAGTACTTCACTTTTATTATATAAAACGGATTCTATCCATTTACTTTTAGATCTACTAGTACTAGTTAACATGACATAGTTCGACCGGTTAAAGTATATATCTTCGACCAAAATTTTAGAGGTATGGACCCACCTTCACATGGTGTTAAATTCAAATAAAATATATTAATACTAGCTAGCACTCCACACCTGTTTCCAAAGTTTGAAAAATGATAAAATGAGCAGGTAGGCTTTGAATAATTAATATATATATATATATATAGAGGAAATAAAGCGAGAAAATATAAAATATAAAGTATCTTATATTTTTGGGTTAGGAACAACTCGTTGCCTTTGATCCATTTACCTAGATAACACTCAGCTGCTGCCTTCGCTCTCGTCTTCATGAAAATTTTTATCAATTTCGTTGTCTAGCAAGTATGCAAGAGACCCTGCAAATCGTGCATAAACTATTAGCATGCACCTATACAAATCACCAAATCTAACTTTAGAAAGTTTCTTTTATGCTCATTCTTATAAAAAAGAATTATAGAACAAATGATTAAAATCAATGCCTTGCAAGGACGCCAAAAGCTTGTTGTCCTAACAACTCCCAGTGTTTGAGCAAGTACAAGTATACAGTAAGAGGTTGTATCAAGTGATGAAATTTATCCATACAGGGAAGGGAAATTTGACTTCAGAAGCGGTTAACTAAACAAATATTTTTGTGTTATAAAACTAAATAACGAATAAATAAAAATCGCATAAACACAATATAAAGAACGTGTTGGGATAATGGAGCCAAACCAAGCAGAAAATCTTTTTCCTATAGGGAAAAAGTTTTTTGAATTTTTTCTTATCCTATTTAGTTTGAACTTTTTTATTTTCCCTTTCGCGTTTAGTTTTTGTCATACCATTTATTATAAATAGAAATATATAGATTAGTCATTTGATGGTGTGCATAAATACAGAGTCGTGAGAAATTCTCCAAGAAGAGGGATTTTCAGAGCTAAACACTTGTGTATCCATTTGAGAGTTCGAAACACTTGTAGAGTGATTCTTGAATGTTTTCTATGTGAGGGAAAGATGAGAGAAATCATTGAAATAACCTGTAAACTATTGGGAGATTCTTCCTGACATTTTAGTAGAACCTGCAACGGTAGTAGAGAATTGGATGTAGCCTACATTGGGTGAACCAATATAAATCTAGCGTTTAATTTTCTTCTTCCTAATCCTTATTTATCGTTCATGTTACTTAGAAATTTTAGATTATGTTAGTAATCTTTTAAGTGGTAAGTTCTAGTTTGAAATTTGAATTCCGCATTAATTAGTACCAGAACGTGATCTGGGATTAACTAACGAATATTGTCTGCATTTGAGATTGAGATAATTATTAGTTGGCTATATTTTTTACAACAATTGGTATCAGAGCCCAAGGTTGAAGAACGATGACTAGAGAAGATAAATTTGTTGTTTTTTATGGAACTAATTTTTCGTAATGGAAGGATCATATAGAAAATTATATACATTCCAAGGAATTGTAATTACCATTAGACAAGAAGTCGGGTGACATGGAAGAAGCCAAATGGAAACCCAAAAAATGAGACCAAAGCCGAAAATGCTAAAAAACAAGCATTCGGTTAAAAAATTGAGATCCAGCTGAGATTAATGAGCCAAAAGAGCCACGATCTTGAGGGAGCATGTTAAAGATCTCACATTGAAAAGAAAATAGACCTAACAAGGGTTTATAATAGACATGAGCTACTCCTCTCATTGCCAATTGGTTTTGAGATGAAACCCGATGAATATTAATAGACAGGAAGATGTGGGCAGAGCAGCGTCGCTAAGGAGACTACCACAATGGGGCTAATGACTGCACTATCCAACATGTATGAGGACCCACGCTAACAAACTAGTTATTGTTGATTTAACGTTTACGGATGAATTAAATGCTATCTTGTTGTTGAGATCCTTACCTGACAGTTGGGAGCCTATGAAGGCAGCTATTTCAAATTCTCGTGGAAAAAAGAAATTCACATTCGCAGATATCAGAGATGTAGCTCTTGGAGAGGAGATTTGTAGAAAGGATTATGGTATTGCGTCTACTTCTAGTACAACATGGAATGTGGACAGAGGAAGAAATAATAACAGAATAGAAAATCTGAGGAGGAACTACAAACTCCCAAAGCAAGCTAAAGGAAAAGAAGTTGGTGAAAATATTGTTGTTAAAGAAATACATGATACTCTAGTTCTTGAAGTTTAG ATGTCGAGCAGAAGATCATCGCGTTCTAGAAACTCCGCTTCTATTTCTGCTCATATCTCTGATGACGAGATTGCCGATCTTGTTTCCAAGTTGCAGCGCCTCATCCCTGAGATTCGTAACAGGCGCTCCGATAAGGTGGCAGCTTCAAAAGTGCTACAGGAAACATGCAACTACATAAGGAGTTTACATCAGGAAGTGGATGATTTAAGTGAGCGATTGTCTCAGCTTTTGGCCGCAACTGAAAACGGCAGTGCCGAGGCAGCCATTATTAGGAGAAGATGTGGGCAGAGCAGCGTCGCTAAGGAGACTACCACAATGGGGCTAATGACTGCACTATCCAACATTTGGGAGCCTATGAAGGCAGCTATTTCAAATTCTCGTGGAAAAAAGAAATTCACATTCGCAGATATCAGAGATGTAGCTCTTGGAGAGGAGATTTGTAGAAAGGATTATGGTATTGCGTCTACTTCTAGTACAACATGGAATGTGGACAGAGGAAGAAATAATAACAGAATAGAAAATCTGAGGAGGAACTACAAACTCCCAAAGCAAGCTAAAGGAAAAGAAGTTGGTGAAAATATTGTTGTTAAAGAAATACATGATACTCTAGTTCTTGAAGTTTAG ATGTCGAGCAGAAGATCATCGCGTTCTAGAAACTCCGCTTCTATTTCTGCTCATATCTCTGATGACGAGATTGCCGATCTTGTTTCCAAGTTGCAGCGCCTCATCCCTGAGATTCGTAACAGGCGCTCCGATAAGGTGGCAGCTTCAAAAGTGCTACAGGAAACATGCAACTACATAAGGAGTTTACATCAGGAAGTGGATGATTTAAGTGAGCGATTGTCTCAGCTTTTGGCCGCAACTGAAAACGGCAGTGCCGAGGCAGCCATTATTAGGAGAAGATGTGGGCAGAGCAGCGTCGCTAAGGAGACTACCACAATGGGGCTAATGACTGCACTATCCAACATTTGGGAGCCTATGAAGGCAGCTATTTCAAATTCTCGTGGAAAAAAGAAATTCACATTCGCAGATATCAGAGATGTAGCTCTTGGAGAGGAGATTTGTAGAAAGGATTATGGTATTGCGTCTACTTCTAGTACAACATGGAATGTGGACAGAGGAAGAAATAATAACAGAATAGAAAATCTGAGGAGGAACTACAAACTCCCAAAGCAAGCTAAAGGAAAAGAAGTTGGTGAAAATATTGTTGTTAAAGAAATACATGATACTCTAGTTCTTGAAGTTTAG MSSRRSSRSRNSASISAHISDDEIADLVSKLQRLIPEIRNRRSDKVAASKVLQETCNYIRSLHQEVDDLSERLSQLLAATENGSAEAAIIRRRCGQSSVAKETTTMGLMTALSNIWEPMKAAISNSRGKKKFTFADIRDVALGEEICRKDYGIASTSSTTWNVDRGRNNNRIENLRRNYKLPKQAKGKEVGENIVVKEIHDTLVLEV Homology
BLAST of Moc08g31850 vs. NCBI nr
Match: XP_022151333.1 (transcription factor PRE6-like [Momordica charantia]) HSP 1 Score: 164.5 bits (415), Expect = 1.0e-36 Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0
BLAST of Moc08g31850 vs. NCBI nr
Match: XP_022946595.1 (transcription factor PRE6-like [Cucurbita moschata] >XP_022999784.1 transcription factor PRE6-like [Cucurbita maxima] >XP_022999785.1 transcription factor PRE6-like [Cucurbita maxima] >KAG6599062.1 Transcription factor PRE6, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030000.1 Transcription factor PRE6, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 137.1 bits (344), Expect = 1.7e-28 Identity = 78/91 (85.71%), Postives = 84/91 (92.31%), Query Frame = 0
BLAST of Moc08g31850 vs. NCBI nr
Match: XP_023546056.1 (transcription factor PRE6-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 136.0 bits (341), Expect = 3.8e-28 Identity = 77/91 (84.62%), Postives = 84/91 (92.31%), Query Frame = 0
BLAST of Moc08g31850 vs. NCBI nr
Match: XP_008465587.1 (PREDICTED: transcription factor PRE6-like [Cucumis melo] >KAA0036447.1 transcription factor PRE6-like [Cucumis melo var. makuwa] >TYK00039.1 transcription factor PRE6-like [Cucumis melo var. makuwa]) HSP 1 Score: 134.4 bits (337), Expect = 1.1e-27 Identity = 77/92 (83.70%), Postives = 85/92 (92.39%), Query Frame = 0
BLAST of Moc08g31850 vs. NCBI nr
Match: XP_004146747.1 (transcription factor PRE6 [Cucumis sativus] >KGN47805.1 hypothetical protein Csa_003742 [Cucumis sativus]) HSP 1 Score: 131.3 bits (329), Expect = 9.3e-27 Identity = 75/92 (81.52%), Postives = 82/92 (89.13%), Query Frame = 0
BLAST of Moc08g31850 vs. ExPASy Swiss-Prot
Match: Q8GW32 (Transcription factor PRE6 OS=Arabidopsis thaliana OX=3702 GN=PRE6 PE=1 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 7.9e-29 Identity = 71/91 (78.02%), Postives = 83/91 (91.21%), Query Frame = 0
BLAST of Moc08g31850 vs. ExPASy Swiss-Prot
Match: B8APB5 (Transcription factor ILI6 OS=Oryza sativa subsp. indica OX=39946 GN=ILI6 PE=3 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 1.1e-22 Identity = 63/91 (69.23%), Postives = 77/91 (84.62%), Query Frame = 0
BLAST of Moc08g31850 vs. ExPASy Swiss-Prot
Match: Q0DUR2 (Transcription factor ILI6 OS=Oryza sativa subsp. japonica OX=39947 GN=ILI6 PE=1 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 1.1e-22 Identity = 63/91 (69.23%), Postives = 77/91 (84.62%), Query Frame = 0
BLAST of Moc08g31850 vs. ExPASy Swiss-Prot
Match: A2Z730 (Transcription factor ILI7 OS=Oryza sativa subsp. indica OX=39946 GN=ILI7 PE=3 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 7.2e-22 Identity = 55/86 (63.95%), Postives = 74/86 (86.05%), Query Frame = 0
BLAST of Moc08g31850 vs. ExPASy Swiss-Prot
Match: Q338G6 (Transcription factor ILI7 OS=Oryza sativa subsp. japonica OX=39947 GN=ILI7 PE=3 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 2.7e-21 Identity = 54/86 (62.79%), Postives = 73/86 (84.88%), Query Frame = 0
BLAST of Moc08g31850 vs. ExPASy TrEMBL
Match: A0A6J1DBW8 (transcription factor PRE6-like OS=Momordica charantia OX=3673 GN=LOC111019298 PE=4 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 4.8e-37 Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0
BLAST of Moc08g31850 vs. ExPASy TrEMBL
Match: A0A6J1KGK3 (transcription factor PRE6-like OS=Cucurbita maxima OX=3661 GN=LOC111494030 PE=4 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 8.2e-29 Identity = 78/91 (85.71%), Postives = 84/91 (92.31%), Query Frame = 0
BLAST of Moc08g31850 vs. ExPASy TrEMBL
Match: A0A6J1G4C0 (transcription factor PRE6-like OS=Cucurbita moschata OX=3662 GN=LOC111450613 PE=4 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 8.2e-29 Identity = 78/91 (85.71%), Postives = 84/91 (92.31%), Query Frame = 0
BLAST of Moc08g31850 vs. ExPASy TrEMBL
Match: A0A5D3BPI2 (Transcription factor PRE6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold360G00850 PE=4 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 5.3e-28 Identity = 77/92 (83.70%), Postives = 85/92 (92.39%), Query Frame = 0
BLAST of Moc08g31850 vs. ExPASy TrEMBL
Match: A0A1S3CPL2 (transcription factor PRE6-like OS=Cucumis melo OX=3656 GN=LOC103503223 PE=4 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 5.3e-28 Identity = 77/92 (83.70%), Postives = 85/92 (92.39%), Query Frame = 0
BLAST of Moc08g31850 vs. TAIR 10
Match: AT1G26945.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 128.6 bits (322), Expect = 5.6e-30 Identity = 71/91 (78.02%), Postives = 83/91 (91.21%), Query Frame = 0
BLAST of Moc08g31850 vs. TAIR 10
Match: AT3G28857.1 (basic helix-loop-helix (bHLH) DNA-binding family protein ) HSP 1 Score: 100.1 bits (248), Expect = 2.1e-21 Identity = 57/92 (61.96%), Postives = 74/92 (80.43%), Query Frame = 0
BLAST of Moc08g31850 vs. TAIR 10
Match: AT5G15160.1 (BANQUO 2 ) HSP 1 Score: 99.4 bits (246), Expect = 3.7e-21 Identity = 55/87 (63.22%), Postives = 71/87 (81.61%), Query Frame = 0
BLAST of Moc08g31850 vs. TAIR 10
Match: AT1G74500.1 (activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 1 ) HSP 1 Score: 97.8 bits (242), Expect = 1.1e-20 Identity = 59/92 (64.13%), Postives = 79/92 (85.87%), Query Frame = 0
BLAST of Moc08g31850 vs. TAIR 10
Match: AT5G39860.1 (basic helix-loop-helix (bHLH) DNA-binding family protein ) HSP 1 Score: 96.3 bits (238), Expect = 3.1e-20 Identity = 56/92 (60.87%), Postives = 75/92 (81.52%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|