Moc08g31400 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc08g31400
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Ty3/gypsy retrotransposon protein
Location	chr8: 22605687 .. 22615264 (-)
RNA-Seq Expression	Moc08g31400
Synteny	Moc08g31400

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTCCGATGCTGGAGAAATACTCTGTTGGCCATAAATGTAAGAATCAGAAGCTGGGGGTGTACGTGGTCCATAACGATGAAATAGCAGAGGAAGAGGAGATGACAGAGGTGGAGGCTTTGAACCAAGCACACGGCAACGAGAAGGGTAAGGTTGTTGAATTTGTAGCTTTTAACACCTTGGTCGCATTTACGACAGAGACGCAAAAATTAAAAGGGGCTATCCAAGGTAGGGAAGTGGTGGTTATGATTGACTGTAGAGCCACACATAATTTCATCTCTCAGCATGTGGCTAATGACTTGAAATTGCATTGCATAGAGACCTCGAGTTATGGGGTGATAATGGGTTTGGGCACGCCAGTTAAAGGAACAGGAATGTGCAGGGGAGTGGTGCTAAATCTGCCAAAGATTACGACTAAGGATGATTTCTTGCCACTCAAACTAGGAAGTTTTGATGGGAAAGATGATGGGGTGTTAGGAATACAATGGTTAAAGCGCATGAGAAAGATGAAAGTGAACTGGTCAGTGTTAATGATGTCTTTCAAACGCGACAGTAAGAAGATCAAGCTACAGGGCAACCTTCTCTAACACAGCTTGAGGTCTCATTCAAGCGTTTGGCGAAGGGATGGGAGGAGCACGATCAAGCATTCTTGGTTGAATTAAAGGTGCTGACGGCCACACGAGAACCCCTACTGGAACCAAATCTTGTCCAACCTAACTAGATGCCTCGTCAGGTGAGTGAACTCATTACAGAATATGCTTCGATATTTCTTAGTCCAACTACTCTCCCACCCACCTGCGTCATAGATCACCAAATACAATTGAAAGAAGGAAATGGCTCATTAATGTGAGACCATATAGGTACCCTCATGCTCAGAAGTCGGCCATTGAATAGTTAATCAACGAAATGTTGTCGTCTAGAATTATAGTGTGAGTCCATACTCAAGCCTGGCAATTCTGGTTAAGAAGAAGGATGGTAGTGGGAGGTTTTATGTCGATTATCGGGCACTAAATAATGCGACCATTCCCGACAAGTTCCCTATGCTTGTGATCAAAGAATTACTGGACGAACTACATGGTTCACGAATTTATTCGAAGATTGATCTAAGGTCAAGATACCATTAAATTTGGGTGGCTAAGGATGATATACAGAAAACGACTTTTCGAACTCATGAGGGCCATTACGAGTTCTTGGTTATGCCTTTTGGGGCTGACCAATGCCTTGTCCACCTTCCAAGCTCTGATGAATCAGGTATTCCGTCCTTTCTTGCATCGTTTCATTCTTGTATTCTTCGATGATATACTAATTTATAGCTCGGATATAGATTCTCATGTTACACACTTGTCTGTTGTGTTTAACATCTTGCGAGAGAATGAACTGTACGTCAACTTGAAGAAATGTCAATTTGCTTAAACGAAGATTGAATATTTAGACCATTAAGTGCCTACACAAGGAGTCGAGGCCGATCCAAAGAAGGTTCGAGCTATGCTCCAATGGCCACAGCCGTCCAATCTGAAAAAGTTGCGAGGGTTCTTGGGCTTAACATGATATTACTGTCGTTTTGTGGAAAACTATGGTACTTTGGCAGCTCCTTTAATCCAGCTCTTAAAAAGGATGCCTTCAAATGGGATGAGCGAGCAACAGAGGCATTTGAGAGGCTCAAACAGGCGATGGTGACCCTTACAATCCTAGTGTTACCTGATTTCTCCCTTCCGTTTGTCATTGGGTCAGATGCTTTCGGATATGGATTGGGGGCGATTCTGTCACAGCAACAAAGGCCCATTACGTATTTCAGTCACACATTATCTCAACAAGTACAAGCTAAACCGATCTATGAGCTAAAGCTAATGGCGGTGGTGATAGACGTGCAATGTTGAAGGCCATACTTATTGGGCTAGTGCGTATAGACCAACAAGCTTTGAAGCATTTCATGGACCAACGAGTCGTTCCTTGAGATTACCAGTGTTGGATATCCAAGTTGCTAGGTTACTATTTCGAGATACATTATCGACTAGGGCTTGAAAATAAGGCGATTTATGCTCGGATACCCCCCGTTGTTCACCTAGCGGCACTAACAGCTCCCACCTTATTGGATGTCGAAGTTATTAAGAAAGAAGTGTTAGAGGATTCCTATTTGTTGATGGTCGTGGCCGAGCTAAAAAACCATGAGGATAGTGCTTCAAAGTTCCATATTCAGCAGGGTACCCTACACTACAAAAATCGTTTGGTGTTGTCCAAGACATCGACGCTTATCCCTGAAATTCTTCACATGTACCATGATTCTATCATGGGCGGCCATTCCGATTTTCTGCGGACGTACAAGCAACTCACATGTGAACTTTATTGGCAGGGGATGAAGGGGCAAGTTAAAGCTTATATTGAACAATGCTCTATTTGTCAAACAAATAAATCCAGCGTTGCTTCTCCCGCGGGTCTCCTTCAATCGCTCCCTACTCCGGATCGTATATGGGAAGACATGTCTATGGACTTTATGGAGGGACTGCCAAGATTTGGGATAAGGAAGCCATTTTTGTGGTGGTGGATCGGTTAAGTAAGTATGCCTAATTTATTCCTCTCAGTCACCCCTTTTCAGCCAATAGCATAACAGGGATTTTTATGCGTGAGATTGTGCGTTTGCATGGTTTTCCCGTTCCATAGTCTCCGACAAGGACAAGATTTTCATCAGTTATTTCTGGTCGGAGTTGTTCAAATTACAAGGGACTCAGTTAAGACGAACCACAAACTATCATCCCCAGACAGATGGACAATCTAAGGTTGTGAAAAAGTGTTTAGAGGGCTATCTTTGTTGCTTCTGTAACGAGTCCCCAAAAAAATGGGAACAGGGAATACCGTGGGTAGAGTTCTGGTATAATACCACGTTCCATGCTTCCACTAGAATGACCCCCTTCCATCTGGTTTATGGGCATCAACCACCACCTCTAATGAGTCATGGGGATCAGAGAACCGCCAATACGACCTTTGATCAGCAATTGGTAATAGAGATGAGACCATTGCACGATTGAAAGAACACTTGAGATTAGCACAAGACTGAATGAGGAAATTTGCAGTCCGCAAGCGGTGGGATGTGGAATTTGAAATTGGGGATCTTGTCTATTTGAAGATCCGCCCATATCGATAGAAGACAGGCACAAAACGCCGCAATGAGAAATTGGCCCCAAAATACTTTGGTCTATTTCCCATCTTAGCCCGTATCGACAAGGTTGCGTACAAGCTCTAATAACCAGTGGAGGTTCGAATCCATCCGGTATTCCATGTAACTCAGCTCAAAAAGGTCGTTGGGACCTCATTCATGATGCGTCCAATAACACATTGGTTGACCGAAGAGATGGAATGGCTGGTGGAACCAAAGGATGTATTTGCCACTCAACTCAATCCTAAGACTAAAAACAGGGGAAGCTTTGGTCAGTTGGAAGAACTTGCCAGAAGAAAAAGCAACGTGGGAAGCAGTTCATGACTTAAGCCGGCAGTTTCCCGATTTTCACCGTCTGCATTTTCCTGAGTCACACCTTGAGAATATGACTTTTGAACCAACGGCTGATGTTAGAGCTCCAGTTGTTAACACTTATAGTAGGAGGGGTAGAGTGGCAATTCTACATTCATCTAGGGCCGGAAGGAGGGAGAGGTAGAGTGGGTACTTTCCACTCTAGTTAGTTAGGAAAGAATTCAGAAGTGAGTGAAGAATAAATAATAGTCATAGGGCGCTCATTTGGAGGTAGGCATTATTTTGGTGAATAGTTAGTTGCTATTGCGGGAGAGGTTTCTAGTCTTCTCGAATTGGTTGGTCGGTTGTAAGCCTAAGGCCTCTGCTTGATTTCAATACCAAGAACTTGTAAGGAGATTCCTTACATAATTGTTCCCCATCCTTAAATGCCTATAAATATCGGAGCGCACTCCATACGCAGGTATGAAAAATCGATAGCTTGACTTCAAACTAAATACATCGGATCAAGACTACTTGAACTTCGAAGTGATAACTTTGTTTTGCAGTCTATTCTTTCACAGTTCTTAAGAGTGATCATATATATTGAATTGTTTCATCCCTTAAGAATTATGTTATCTTTGCACCAAAATGGAAGTTAAGACCATGTATATATGGTCTGTATAACAAGTAATATATATAGTAGTATTCTAAGATCTCATCTCCAATTGAAACTTTTTTTTCAAGCTATAATTAGCTGATGAACCTTAGATCATTCAAGGATCAATTGTACTAACAATGATTTGGTTTCCAACCTAAAGAAATGAAATATAAAGTATTAAGAATATATAATGGTATAAAAATAAATGTATAAAAAATATCATTCCACGGGTTGAGAAAAAAGGTTAGAAAAGCAAACCGAGTTGTGTAACACGTCCTATAAGCATACTACCGTGGTACTTGTCCAACATACCCTAAGTCATACAAGAGTTTGTGTCAAGTAAAATTGAATCTAGGATTGCATCCCTCATATGTGAGGCATCTTCTTCTATTTATAAATGGAGTAATTGTTTAGACTTCTCGACAGTCTGGTATGTCTATTTCGTCTTTTCTCTTACCGACCACTCTAATTATTGTTTATGTTTATTGGCAGCTTTATGGTATATATTTGGGATCTTCGATGATATGTCATCTATAATTTTTTACAACGTTATGGCTTCTCAAGTCGATTTGGTGTCAGGAGATCCAACTTTAGCTCGACTAGCAGGCTAAAAACTATTCTCAAGTGACGGCTTGGTTTTTCCTCAAGAATAGACTCTTCTCCCACCTCGACTCTTCTGCTTGACTCTTTAAAGAGAGACGAAGCGGCTAGATCCACTTGATTGGATGGGTCTTGACATGCTTACAAACTCGAGTTTGATGAATTTATTTGCAAAATTTTAGTCTTTGTTTTAAAAAATTTGACTAAAATTTCAAATGTATTTCTAAAATGTGAAAAACTAAAGCAATAATGTTCTTACCGAAAAACCGATAATTACAATAGTTCCTCGAGAACACTCTTGGATTTGAACTTGCAACAAATAAACTAATACTCCGACGATCAAGTTAGTCTCTATGCCAAGTAAATAATAGGAAATTGTATCAGTCAATTTTTGCATACCGTCTCCATTCGCCCATGTGGTATTTATAGATGAAGCAAGGAAATGACCGTTGAGGAGTTTGGCTCCTCAATTGAATTAAATGGTTCCCACTCCATGGAAATAGGGAACCTGCGTGTTGAGTAGGGGAGCAGTTTGACTGTCATGACGTAAATAGTTGAGTAAACCGTTTGACTTGACGTCCAGCCCGGCTGAGTGTTCAGTTCGGTTATGATCTGACCTCGTGCTCAGACAACTCCCCCTTTGGATTGATGGAATGACGTGTCTTCGAGATTCGAGGGTTAAACAATAGCCCCCTACTTCAAGAAGATTCTATGATTTTATTTGAACTTCTTGAAGTAGTACCTAATTCGACCCGCGAGGTGCAGAGCCGAACTCGTCTTTTTCCCTTTCCTTCCAAGCTAACACCGCCCTCCACTAAGTATTTATAGCACCCCAGTACAACTTTTTAATTCACGCGTTCGAAATCATTCAAGGGACTTGGTTAAACGGCTAGGGCAATAGTCCTCGATTATAGCGGATTTACAAGGTTAGGTACCACTTTCATCTTCGCTTTGCATTTTGGTAGCTTCCGCACCTGTATTAACTTCTTACCATCACTTAAGTTCTATAAATGGCTAGAACCAAATAGTTTGATGCTAGTACTCATAATCGGTATAGGGCTTCAACTTCTCAAGTACCCTTTGAAGATTCCCCGATAAAAAGTATAAAGTCTCGTCGTCGTAAACGTAGTGAATCATCGGAGGGACGTGGTGATTGCTCCGATTACTTGTACTCCAACTGCCCTGAGGAGTTGTTAGGAATTCTTAGATATAACTACTCCATCCCAAATGACATTGAATTGAGGATTCCTGCGGCAGGCGAAACGATTAACAAACCTCCGCCTGGGTGCGTCAGTTTTTATCCTCAAATGTTTGAGTACGGGGTTAGGTTACCCTTGCATCTCTTCGCCCAAATCTTTCTTAATGTTGTCAACCTAGCTCCTGCTCAGCTAACACCAAATGGATGGGGCACCCTAATGGGTTTCTGGTAACTGTTGGGTGTGTTGCCCTAAACTCATAATTTGTATTTATATAGAAACAAATGTATATTCAATAAAGTTTTATTCAATGAATTTGTTGTTGCATTCATAGTATTGCATTGTCCAAAATCCAATAAACTAAACATCCAAGGTTATTTTCATGTAATCGCGACAGTATATATACTGGGTATATATTTGATATACCCCTGATATACGAGGTATATATTTGATATACCCCTGATATACGAGTAGATAATGTCTCGTGAATAACCTAAAGGGTCTATAGTATATGGATAAAGCTGGGTACCTTATCCTGGCAACAGTGGCTATGACCCACTTTGTAAATGTTATAGACAACTAGATCCAGGTCGTTCGTGTGGAGACATGCGAGTGGGGGTATCCTATACAATGAGTTTGTATAAGACTGGACTGCGAAATAGACAATCTTTAGATGTAACGCCATTAACGAACAGATTGCTATTTCATAGGATGACTAGACAACTCATTCTCAATCCTGAGTGAGTTATGGACTCCTGCCCGTGAGGGCTCGTTCTTTGATCTATATGGGTGAGAGTGGTCCGAGTTGCTGACTCAATATTCCTACCATTTTGGGGATGAGACCGAATGGGGAGCTGGGAACATAACTTCACAAGATGGAATTCACTCCTCTCTGACTTTAGGGGAGTAGATGAGTGTTAATTATTTATTTAATTTATATATATGTATATATATATATTAGATTAATAATTATTTATTATTTATATATATATATATATATTACCACTTTACTATTTTACTCTCCTGCAAAATTGCAGGGGAGTGGACAGTTAAGTGACATGGGGTAACTCCCCATGACACTGTGTTTGTTATTGTGTTTTTGCAGTTCTGCAAAAACAAGCTAGACAATAACAAAGAAGGTGAACTCCCAGCATCTCTCTCAAGCAATCTCTTTCAATTTCCCCTCTTGTTCCAAAGAAACACTTCCACAAGAACGATCTCGGTACCCAAAGGATGCTTGGAAGATCGTTTGGTGGTGTTTGGGAATTCTTTTGAAGAATTGTTCATCAAAGGTAAAGAAAACAAGTTTCCCCTATATTTCATATTTTACACATTTTTTATTTTGTTTCTAGAAATTGATGAACAAATATCTGCTTCCGCTCTAGGATTCACATCCCATCAGTATCTATGGTGGCGATTCTGTGAGGATAGAACTTGTGTCCTATCCGTCGAACAAATGCTTTCCATCCATACCATCAAGAAATCGTCCAAAGCCCCTCGTCGATTTTACTTAAGTTGTTTTCTTGGTATCGCCAAATTAGTCAATGGACCGGTAATGGAGAAGGGCTTCTCTTCAGTCGTGAACGGACCCACTTCCATAAAGAACTGGAAGCAAATGTGGTTTTATGTTTCCAGAAATTGGTTAATGACGACCAGCGAAGAGGCCCCTTATTGTGAGGTCCCTAAGGAATTCGGTAGATTGGGTAAGCTCAGGCCTGAGGATTCTTTACTGTTTTGTATGTGCATATATTCTTTATTTAGGCTATTCTACTCACTAATTCATCATTTTGGCAGTGTTGATCCATCCTCCGCCAGAATTGACCGAGGAAACCAGATCGGTTTTGGCTGGTTGTGCTACTATTTCAGCCACGGATCATTATAATCCCGACCTTCTGTCCAATCGGAACTTGAGAAGTGTGGGCTCGCGGCTGAACTCACAGAAGGTTAACTCTGTCTCTTGTTTCCCATGTCTCTTTTCCATTCGCAATTTCTCATTTCGTTTTTGTCGGCCTTGCAGAGGAGATGAACCCCCGACCATCTAGGTTTAATAGCAGTCGATGCCACGGTGTACCCCTTGGGAATGGTTTAGCTGACTCCGCTAGGGTGAGAATGTAGTTTCGAAGTCTCCTCTCCAAGAGAAAAAAGACATAAAGCGGCTTATGACCCTCAAGCTCAGTCTATGCCTGAGACCAGGTCTGCAGGACTAGGATGTGATCAGCCTCCACCGCTTAGACCGATGCCTCCGAAGAAAACCCTCAAACGGAAAATTGCTTTACCTGTCATTGAGATAAATGAACATGGGATCTCCTCCACTCATACTTCGCAGAACGACAATGCTGGCGACCAACTTCAAAGGTAGAGGAAATTGGGCATCGTGGCCAATCCTGGAACTTTTGCTTCTTCAGCACAACTTCCGCCTGAAGCCAGCTCCGGTGGCCTCCAAACTGAGCTTGTCGTCCTGACCGACCCAACCTTCAGAATTGACGAGGGATCTGGCTTTGCCGGTCTGGGGGATGGACCTAGTATTTCCCTTCAAGAGCTCGACGAGGTCCAATCTCACTCCCCTTTAGGTGACGATACGACTTTCACTACTGGACCATCAAACGTTAGGGAGGCTTATTTCGAGATTTCTGAGAGTCCCCTAGTCCATGCTGTCGGGATCCCCCCCTTTTTTACCGACCTTAATAGTGAAAACATATTATCTCTCACTGACAAACTCTATTCTGCTTTTATCGGCGATTTGGAAAAACATGCTCGTTGTGTCAGACCTTCGTCTCTCCGGAACTCTTTCTGAAATTTCCACCTGTATTATGAAGGTAACTTCCAATTCCTTGAAATTTCGATATAGTTCTTAACCTTTAAATAACCACGTTTGATTTCAAGCTTTTGCTCTTTCTTGTCGTGGAATGACCTCTATTGGAGCCGAGCTCTCTTATCGCGACTCCGCCAGCCAAAAGAACAAAATCAAGCTGGCTGAGGCCACTAAGAAAGATGCCTCTTGTTGAAGCTTGAAACCCTCAACGTTCTCGCTGCGTCAGAGAAATGCATCGTCGAAAATAACAAGTCTAAGGTCGAGCAGACCAAATTGGAGGAAGAAAATCGTCATTTGTTGACCGAAGTCTCCGAGTTGACCACTGAGGCTAATCAGATTAGGCCTCTCCTTGCACAATTAAAGGGCGAGCTCTGCAAACTCAGGACCTCTACAAAGAACGTTTTAAGTGTAGAGGTCGAAAAGAAGAAATTGCTTAAGACGGAGATCGCAGATACCTAATCTACACTCAGTCAAACAAAGTTGCATTTGGCCGTTATTGAATCCAAATTTCATGAGTCTGAAAAGGTAATTCCTGAGTCCATGACAAAATTTGCTGACTTCGAGTCCAGAATTGCAAATACAAAAGCTCGATTTGGCGTTTTGACTTTCTTTACGAGATCATGTCTCAATTTCCAGACTTCAAAGAGTTGGAGAAGGATCTGGAATATGGCGGTCTTAACTATTTGGTCGAGTGGCTAAAAAAATTTGCTCAGGAGGTCAACTCATATCAACTTGTTTTCATGTTTGACCGCGACTGGGAACTTGCTATGAAGAAATTAGTTGATCAGAACGACCGACCAAACCCAGTTGAAGGAACAAAACCTTTCCTCGCCTCTAGTGGGAGCGACCGAGCTAGAGCCCTAGGCTAG

mRNA sequence

ATGTTTCCGATGCTGGAGAAATACTCTGTTGGCCATAAATGTAAGAATCAGAAGCTGGGGGTGTACGTGGTCCATAACGATGAAATAGCAGAGGAAGAGGAGATGACAGAGGTGGAGGCTTTGAACCAAGCACACGGCAACGAGAAGGGTAAGGTTGTTGAATTTGTAGCTTTTAACACCTTGGTCGCATTTACGACAGAGACGCAAAAATTAAAAGGGGCTATCCAAGGTAGGGAAGTGGTGGTTATGATTGACTGTAGAGCCACACATAATTTCATCTCTCAGCATGTGGCTAATGACTTGAAATTGCATTGCATAGAGACCTCGAGTTATGGGGTGATAATGGGTTTGGGCACGCCAGTTAAAGGAACAGGAATGTGCAGGGGAGTGGTGCTAAATCTGCCAAAGATTACGACTAAGGATGATTTCTTGCCACTCAAACTAGGAAGTTTTGATGGGAAAGATGATGGGGTGTTAGGAATACAATGGTTAAAGCGCATGAGAAAGATGAAAGTGAACTGGTCAGTGTTAATGATGTCTTTCAAACGCGACAGGGAAGCTTTGGTCAGTTGGAAGAACTTGCCAGAAGAAAAAGCAACGTGGGAAGCAGTTCATGACTTAAGCCGGCAGTTTCCCGATTTTCACCGTCTGCATTTTCCTGAGTCACACCTTGAGAATATGACTTTTGAACCAACGGCTGATGTTAGAGCTCCAGTTGTTAACACTTATAGTAGGAGGGGTAGAGTGGCAATTCTACATTCATCTAGGGCCGGAAGGAGGGAGAGGGCTTCAACTTCTCAAGTACCCTTTGAAGATTCCCCGATAAAAAGTATAAAGTCTCGTCGTCGTAAACGTAGTGAATCATCGGAGGGACGTGGTGATTGCTCCGATTACTTGTACTCCAACTGCCCTGAGGAGTTGTTAGGAATTCTTAGATATAACTACTCCATCCCAAATGACATTGAATTGAGGATTCCTGCGGCAGGCGAAACGATTAACAAACCTCCGCCTGGGTGCGTCAGTTTTTATCCTCAAATGTTTGAGTACGGGGTTAGGTTACCCTTGCATCTCTTCGCCCAAATCTTTCTTAATGTTGTCAACCTAGCTCCTGCTCAGCTAACACCAAATGGATGGGGCACCCTAATGGGTTTCTGTGGCTATGACCCACTTTGTAAATGTTATAGACAACTAGATCCAGGTCGTTCGTGTGGAGACATGCGAGTGGGGTTCTGCAAAAACAAGCTAGACAATAACAAAGAAGGTGAACTCCCAGCATCTCTCTCAAGCAATCTCTTTCAATTTCCCCTCTTGTTCCAAAGAAACACTTCCACAAGAACGATCTCGGTACCCAAAGGATGCTTGGAAGATCGTTTGGTGGTGTTTGGGAATTCTTTTGAAGAATTGTTCATCAAAGGATTCACATCCCATCAGTATCTATGGTGGCGATTCTGTGAGGATAGAACTTGTGTCCTATCCGTCGAACAAATGCTTTCCATCCATACCATCAAGAAATCGTCCAAAGCCCCTCGTCGATTTTACTTAAGTTGTTTTCTTGGTATCGCCAAATTAGTCAATGGACCGGTAATGGAGAAGGGCTTCTCTTCAGTCGTGAACGGACCCACTTCCATAAAGAACTGGAAGCAAATGTGGTTTTATGTTTCCAGAAATTGGTTAATGACGACCAGCGAAGAGGCCCCTTATTGTGAGGTCCCTAAGGAATTCGGTAGATTGGTGTTGATCCATCCTCCGCCAGAATTGACCGAGGAAACCAGATCGGTTTTGGCTGGTTGTGCTACTATTTCAGCCACGGATCATTATAATCCCGACCTTCTGTCCAATCGGAACTTGAGAAAGGAGATGAACCCCCGACCATCTAGGTTTAATAGCAGTCGATGCCACGGTGTACCCCTTGGGAATGGTTTAGCTGACTCCGCTAGGACCAGGTCTGCAGGACTAGGATGTGATCAGCCTCCACCGCTTAGACCGATGCCTCCGAAGAAAACCCTCAAACGGAAAATTGCTTTACCTGTCATTGAGATAAATGAACATGGGATCTCCTCCACTCATACTTCGCAGAACGACAATGCTGGCGACCAACTTCAAAGCTCCGGTGGCCTCCAAACTGAGCTTGTCGTCCTGACCGACCCAACCTTCAGAATTGACGAGGGATCTGGCTTTGCCGGTCTGGGGGATGGACCTAGTATTTCCCTTCAAGAGCTCGACGAGGTCCAATCTCACTCCCCTTTAGGTGACGATACGACTTTCACTACTGGACCATCAAACCTTGAAACCCTCAACGTTCTCGCTGCGTCAGAGAAATGCATCGTCGAAAATAACAAGTCTAAGGTCGAGCAGACCAAATTGGAGGAAGAAAATCGTCATTTGTTGACCGAAGTCTCCGAGTTGACCACTGAGGCTAATCAGATTAGGCCTCTCCTTGCACAATTAAAGGGCGAGCTCTGCAAACTCAGGACCTCTACAAAGAACGTTTTAAGTGTAGAGAATTGCAAATACAAAAGCTCGATTTGGCGTTTTGACTTTCTTTACGAGATCATGTCTCAATTTCCAGACTTCAAAGAGTTGGAGAAGGATCTGGAATATGGCGGTCTTAACTATTTGGTCGAGTGGCTAAAAAAATTTGCTCAGGAGGTCAACTCATATCAACTTGTTTTCATGTTTGACCGCGACTGGGAACTTGCTATGAAGAAATTAGTTGATCAGAACGACCGACCAAACCCAGTTGAAGGAACAAAACCTTTCCTCGCCTCTAGTGGGAGCGACCGAGCTAGAGCCCTAGGCTAG

Coding sequence (CDS)

ATGTTTCCGATGCTGGAGAAATACTCTGTTGGCCATAAATGTAAGAATCAGAAGCTGGGGGTGTACGTGGTCCATAACGATGAAATAGCAGAGGAAGAGGAGATGACAGAGGTGGAGGCTTTGAACCAAGCACACGGCAACGAGAAGGGTAAGGTTGTTGAATTTGTAGCTTTTAACACCTTGGTCGCATTTACGACAGAGACGCAAAAATTAAAAGGGGCTATCCAAGGTAGGGAAGTGGTGGTTATGATTGACTGTAGAGCCACACATAATTTCATCTCTCAGCATGTGGCTAATGACTTGAAATTGCATTGCATAGAGACCTCGAGTTATGGGGTGATAATGGGTTTGGGCACGCCAGTTAAAGGAACAGGAATGTGCAGGGGAGTGGTGCTAAATCTGCCAAAGATTACGACTAAGGATGATTTCTTGCCACTCAAACTAGGAAGTTTTGATGGGAAAGATGATGGGGTGTTAGGAATACAATGGTTAAAGCGCATGAGAAAGATGAAAGTGAACTGGTCAGTGTTAATGATGTCTTTCAAACGCGACAGGGAAGCTTTGGTCAGTTGGAAGAACTTGCCAGAAGAAAAAGCAACGTGGGAAGCAGTTCATGACTTAAGCCGGCAGTTTCCCGATTTTCACCGTCTGCATTTTCCTGAGTCACACCTTGAGAATATGACTTTTGAACCAACGGCTGATGTTAGAGCTCCAGTTGTTAACACTTATAGTAGGAGGGGTAGAGTGGCAATTCTACATTCATCTAGGGCCGGAAGGAGGGAGAGGGCTTCAACTTCTCAAGTACCCTTTGAAGATTCCCCGATAAAAAGTATAAAGTCTCGTCGTCGTAAACGTAGTGAATCATCGGAGGGACGTGGTGATTGCTCCGATTACTTGTACTCCAACTGCCCTGAGGAGTTGTTAGGAATTCTTAGATATAACTACTCCATCCCAAATGACATTGAATTGAGGATTCCTGCGGCAGGCGAAACGATTAACAAACCTCCGCCTGGGTGCGTCAGTTTTTATCCTCAAATGTTTGAGTACGGGGTTAGGTTACCCTTGCATCTCTTCGCCCAAATCTTTCTTAATGTTGTCAACCTAGCTCCTGCTCAGCTAACACCAAATGGATGGGGCACCCTAATGGGTTTCTGTGGCTATGACCCACTTTGTAAATGTTATAGACAACTAGATCCAGGTCGTTCGTGTGGAGACATGCGAGTGGGGTTCTGCAAAAACAAGCTAGACAATAACAAAGAAGGTGAACTCCCAGCATCTCTCTCAAGCAATCTCTTTCAATTTCCCCTCTTGTTCCAAAGAAACACTTCCACAAGAACGATCTCGGTACCCAAAGGATGCTTGGAAGATCGTTTGGTGGTGTTTGGGAATTCTTTTGAAGAATTGTTCATCAAAGGATTCACATCCCATCAGTATCTATGGTGGCGATTCTGTGAGGATAGAACTTGTGTCCTATCCGTCGAACAAATGCTTTCCATCCATACCATCAAGAAATCGTCCAAAGCCCCTCGTCGATTTTACTTAAGTTGTTTTCTTGGTATCGCCAAATTAGTCAATGGACCGGTAATGGAGAAGGGCTTCTCTTCAGTCGTGAACGGACCCACTTCCATAAAGAACTGGAAGCAAATGTGGTTTTATGTTTCCAGAAATTGGTTAATGACGACCAGCGAAGAGGCCCCTTATTGTGAGGTCCCTAAGGAATTCGGTAGATTGGTGTTGATCCATCCTCCGCCAGAATTGACCGAGGAAACCAGATCGGTTTTGGCTGGTTGTGCTACTATTTCAGCCACGGATCATTATAATCCCGACCTTCTGTCCAATCGGAACTTGAGAAAGGAGATGAACCCCCGACCATCTAGGTTTAATAGCAGTCGATGCCACGGTGTACCCCTTGGGAATGGTTTAGCTGACTCCGCTAGGACCAGGTCTGCAGGACTAGGATGTGATCAGCCTCCACCGCTTAGACCGATGCCTCCGAAGAAAACCCTCAAACGGAAAATTGCTTTACCTGTCATTGAGATAAATGAACATGGGATCTCCTCCACTCATACTTCGCAGAACGACAATGCTGGCGACCAACTTCAAAGCTCCGGTGGCCTCCAAACTGAGCTTGTCGTCCTGACCGACCCAACCTTCAGAATTGACGAGGGATCTGGCTTTGCCGGTCTGGGGGATGGACCTAGTATTTCCCTTCAAGAGCTCGACGAGGTCCAATCTCACTCCCCTTTAGGTGACGATACGACTTTCACTACTGGACCATCAAACCTTGAAACCCTCAACGTTCTCGCTGCGTCAGAGAAATGCATCGTCGAAAATAACAAGTCTAAGGTCGAGCAGACCAAATTGGAGGAAGAAAATCGTCATTTGTTGACCGAAGTCTCCGAGTTGACCACTGAGGCTAATCAGATTAGGCCTCTCCTTGCACAATTAAAGGGCGAGCTCTGCAAACTCAGGACCTCTACAAAGAACGTTTTAAGTGTAGAGAATTGCAAATACAAAAGCTCGATTTGGCGTTTTGACTTTCTTTACGAGATCATGTCTCAATTTCCAGACTTCAAAGAGTTGGAGAAGGATCTGGAATATGGCGGTCTTAACTATTTGGTCGAGTGGCTAAAAAAATTTGCTCAGGAGGTCAACTCATATCAACTTGTTTTCATGTTTGACCGCGACTGGGAACTTGCTATGAAGAAATTAGTTGATCAGAACGACCGACCAAACCCAGTTGAAGGAACAAAACCTTTCCTCGCCTCTAGTGGGAGCGACCGAGCTAGAGCCCTAGGCTAG

Protein sequence

MFPMLEKYSVGHKCKNQKLGVYVVHNDEIAEEEEMTEVEALNQAHGNEKGKVVEFVAFNTLVAFTTETQKLKGAIQGREVVVMIDCRATHNFISQHVANDLKLHCIETSSYGVIMGLGTPVKGTGMCRGVVLNLPKITTKDDFLPLKLGSFDGKDDGVLGIQWLKRMRKMKVNWSVLMMSFKRDREALVSWKNLPEEKATWEAVHDLSRQFPDFHRLHFPESHLENMTFEPTADVRAPVVNTYSRRGRVAILHSSRAGRRERASTSQVPFEDSPIKSIKSRRRKRSESSEGRGDCSDYLYSNCPEELLGILRYNYSIPNDIELRIPAAGETINKPPPGCVSFYPQMFEYGVRLPLHLFAQIFLNVVNLAPAQLTPNGWGTLMGFCGYDPLCKCYRQLDPGRSCGDMRVGFCKNKLDNNKEGELPASLSSNLFQFPLLFQRNTSTRTISVPKGCLEDRLVVFGNSFEELFIKGFTSHQYLWWRFCEDRTCVLSVEQMLSIHTIKKSSKAPRRFYLSCFLGIAKLVNGPVMEKGFSSVVNGPTSIKNWKQMWFYVSRNWLMTTSEEAPYCEVPKEFGRLVLIHPPPELTEETRSVLAGCATISATDHYNPDLLSNRNLRKEMNPRPSRFNSSRCHGVPLGNGLADSARTRSAGLGCDQPPPLRPMPPKKTLKRKIALPVIEINEHGISSTHTSQNDNAGDQLQSSGGLQTELVVLTDPTFRIDEGSGFAGLGDGPSISLQELDEVQSHSPLGDDTTFTTGPSNLETLNVLAASEKCIVENNKSKVEQTKLEEENRHLLTEVSELTTEANQIRPLLAQLKGELCKLRTSTKNVLSVENCKYKSSIWRFDFLYEIMSQFPDFKELEKDLEYGGLNYLVEWLKKFAQEVNSYQLVFMFDRDWELAMKKLVDQNDRPNPVEGTKPFLASSGSDRARALG

Homology

[Close]

BLAST of Moc08g31400 vs. NCBI nr
Match: XP_022154744.1 (uncharacterized protein LOC111021922 [Momordica charantia])

HSP 1 Score: 167.5 bits (423), Expect = 5.3e-37
Identity = 88/187 (47.06%), Postives = 125/187 (66.84%), Query Frame = 0


Query: 6   EKYSVGHKCKNQKLGVYVVHNDEIAEEEEMTEVEALNQAHGNEKGKVVEF--VAFNTLVA 65
           EKYS+GH+CKNQ+L V+VVH+D   E  E+ + E +    G E   V E   +A NT+V 
Sbjct: 305 EKYSIGHRCKNQELKVFVVHDD---EGMELDQEELIMSTEGRETTIVEEVAELALNTVVG 364

Query: 66  FTTE-TQKLKGAIQGREVVVMIDCRATHNFISQHVANDLKLHCIETSSYGVIMGLGTPVK 125
           F+T  T KL+G I+ +EVV++IDC ATHNFISQ + +   L   ETS+YGVIMG G  V+
Sbjct: 365 FSTPGTMKLRGLIEDKEVVILIDCGATHNFISQKLVDAFNLPLHETSNYGVIMGTGVVVR 424

Query: 126 GTGMCRGVVLNLPKITTKDDFLPLKLGSFDGKDDGVLGIQWLKRMRKMKVNWSVLMMSFK 185
           G G+C+G++L LP++T +++FLPL+LG+     D VLG+QWL     M+V+W  L MSF+
Sbjct: 425 GKGICKGIILYLPELTIRENFLPLELGNL----DVVLGMQWLSTQGTMEVDWQALTMSFR 484

Query: 186 RDREALV 190
                ++
Sbjct: 485 NGSNRII 484

[Close]

BLAST of Moc08g31400 vs. NCBI nr
Match: XP_022848903.1 (uncharacterized protein LOC111371244 [Olea europaea var. sylvestris])

HSP 1 Score: 145.2 bits (365), Expect = 2.8e-30
Identity = 81/178 (45.51%), Postives = 115/178 (64.61%), Query Frame = 0


Query: 6   EKYSVGHKCKNQKLGVYVVHNDEIAEEEEMTEVEALNQAHGNEKGKVVEFVAFNTLVAFT 65
           EK+  GHKC+N++L V VV  +E  E EE+  V+        E G+VVE ++ N++V   
Sbjct: 344 EKFQPGHKCRNKELHVLVVQGEE--EGEELGNVQV--DEGETEVGEVVE-LSINSVVGLN 403

Query: 66  T-ETQKLKGAIQGREVVVMIDCRATHNFISQHVANDLKLHCIETSSYGVIMGLGTPVKGT 125
             ++ KLKG I G  V+V+IDC ATHNFIS  +A  L++  + T  YG+IMG G+ V+G 
Sbjct: 404 APKSMKLKGTICGHSVIVLIDCGATHNFISVDLAAQLQIPTVPTHGYGIIMGTGSAVRGC 463

Query: 126 GMCRGVVLNLPKITTKDDFLPLKLGSFDGKDDGVLGIQWLKRMRKMKVNWSVLMMSFK 183
           G+C+GVV++LP I   DDFLPLKLG      D +LG++WL+ + KM+V+W  L M  K
Sbjct: 464 GVCKGVVISLPSIEVVDDFLPLKLGC----TDVILGMKWLETVGKMQVDWGNLTMKIK 512

[Close]

BLAST of Moc08g31400 vs. NCBI nr
Match: TYK21209.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 143.7 bits (361), Expect = 8.2e-30
Identity = 77/179 (43.02%), Postives = 117/179 (65.36%), Query Frame = 0


Query: 6   EKYSVGHKCKNQKLGVYVVHNDEIAEEEEMTEVEALNQAHGNEKGKV--VEFVAFNTLVA 65
           E +S GH+CKN++L + VV +D       + +VE ++ A+  E  +V  V  ++ N++V 
Sbjct: 336 EPFSKGHRCKNKELRLCVVADD-------LEDVEMVDSAYEGEMVEVSPVVELSLNSVVG 395

Query: 66  FTTE-TQKLKGAIQGREVVVMIDCRATHNFISQHVANDLKLHCIETSSYGVIMGLGTPVK 125
            T   T KLKG ++ +E+V+M+DC ATHNFIS  +  +LKL   ET++YGVIMG G  V+
Sbjct: 396 LTAPGTFKLKGTVENQEIVIMVDCGATHNFISLKLVENLKLPMAETTNYGVIMGSGKAVQ 455

Query: 126 GTGMCRGVVLNLPKITTKDDFLPLKLGSFDGKDDGVLGIQWLKRMRKMKVNWSVLMMSF 182
           G G+C+G+ + LP I+  +DFLPL+LG+     D VLG+QWL++   M V+W  L M+F
Sbjct: 456 GRGICKGITVGLPVISIVEDFLPLELGNI----DMVLGMQWLQKQGAMTVDWKALTMTF 503

[Close]

BLAST of Moc08g31400 vs. NCBI nr
Match: TYK10423.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 143.7 bits (361), Expect = 8.2e-30
Identity = 77/179 (43.02%), Postives = 117/179 (65.36%), Query Frame = 0


Query: 6   EKYSVGHKCKNQKLGVYVVHNDEIAEEEEMTEVEALNQAHGNEKGKV--VEFVAFNTLVA 65
           E +S GH+CKN++L + VV +D       + +VE ++ A+  E  +V  V  ++ N++V 
Sbjct: 336 EPFSKGHRCKNKELRLCVVADD-------LEDVEMVDSAYEGEMVEVSPVVELSLNSVVG 395

Query: 66  FTTE-TQKLKGAIQGREVVVMIDCRATHNFISQHVANDLKLHCIETSSYGVIMGLGTPVK 125
            T   T KLKG ++ +E+V+M+DC ATHNFIS  +  +LKL   ET++YGVIMG G  V+
Sbjct: 396 LTAPGTFKLKGTVENQEIVIMVDCGATHNFISLKLVENLKLPMAETTNYGVIMGSGKAVQ 455

Query: 126 GTGMCRGVVLNLPKITTKDDFLPLKLGSFDGKDDGVLGIQWLKRMRKMKVNWSVLMMSF 182
           G G+C+G+ + LP I+  +DFLPL+LG+     D VLG+QWL++   M V+W  L M+F
Sbjct: 456 GRGICKGITVGLPVISIVEDFLPLELGNI----DMVLGMQWLQKQGAMTVDWKALTMTF 503

[Close]

BLAST of Moc08g31400 vs. NCBI nr
Match: TYK23724.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 143.7 bits (361), Expect = 8.2e-30
Identity = 77/179 (43.02%), Postives = 117/179 (65.36%), Query Frame = 0


Query: 6   EKYSVGHKCKNQKLGVYVVHNDEIAEEEEMTEVEALNQAHGNEKGKV--VEFVAFNTLVA 65
           E +S GH+CKN++L + VV +D       + +VE ++ A+  E  +V  V  ++ N++V 
Sbjct: 336 EPFSKGHRCKNKELRLCVVADD-------LEDVEMVDSAYEGEMVEVSPVVELSLNSVVG 395

Query: 66  FTTE-TQKLKGAIQGREVVVMIDCRATHNFISQHVANDLKLHCIETSSYGVIMGLGTPVK 125
            T   T KLKG ++ +E+V+M+DC ATHNFIS  +  +LKL   ET++YGVIMG G  V+
Sbjct: 396 LTAPGTFKLKGTVENQEIVIMVDCGATHNFISLKLVENLKLPMAETTNYGVIMGSGKAVQ 455

Query: 126 GTGMCRGVVLNLPKITTKDDFLPLKLGSFDGKDDGVLGIQWLKRMRKMKVNWSVLMMSF 182
           G G+C+G+ + LP I+  +DFLPL+LG+     D VLG+QWL++   M V+W  L M+F
Sbjct: 456 GRGICKGITVGLPVISIVEDFLPLELGNI----DMVLGMQWLQKQGAMTVDWKALTMTF 503

[Close]

BLAST of Moc08g31400 vs. ExPASy TrEMBL
Match: A0A6J1DN22 (Reverse transcriptase OS=Momordica charantia OX=3673 GN=LOC111021922 PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 2.6e-37
Identity = 88/187 (47.06%), Postives = 125/187 (66.84%), Query Frame = 0


Query: 6   EKYSVGHKCKNQKLGVYVVHNDEIAEEEEMTEVEALNQAHGNEKGKVVEF--VAFNTLVA 65
           EKYS+GH+CKNQ+L V+VVH+D   E  E+ + E +    G E   V E   +A NT+V 
Sbjct: 305 EKYSIGHRCKNQELKVFVVHDD---EGMELDQEELIMSTEGRETTIVEEVAELALNTVVG 364

Query: 66  FTTE-TQKLKGAIQGREVVVMIDCRATHNFISQHVANDLKLHCIETSSYGVIMGLGTPVK 125
           F+T  T KL+G I+ +EVV++IDC ATHNFISQ + +   L   ETS+YGVIMG G  V+
Sbjct: 365 FSTPGTMKLRGLIEDKEVVILIDCGATHNFISQKLVDAFNLPLHETSNYGVIMGTGVVVR 424

Query: 126 GTGMCRGVVLNLPKITTKDDFLPLKLGSFDGKDDGVLGIQWLKRMRKMKVNWSVLMMSFK 185
           G G+C+G++L LP++T +++FLPL+LG+     D VLG+QWL     M+V+W  L MSF+
Sbjct: 425 GKGICKGIILYLPELTIRENFLPLELGNL----DVVLGMQWLSTQGTMEVDWQALTMSFR 484

Query: 186 RDREALV 190
                ++
Sbjct: 485 NGSNRII 484

[Close]

BLAST of Moc08g31400 vs. ExPASy TrEMBL
Match: A0A5D3CEX8 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G00690 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 4.0e-30
Identity = 77/179 (43.02%), Postives = 117/179 (65.36%), Query Frame = 0


Query: 6   EKYSVGHKCKNQKLGVYVVHNDEIAEEEEMTEVEALNQAHGNEKGKV--VEFVAFNTLVA 65
           E +S GH+CKN++L + VV +D       + +VE ++ A+  E  +V  V  ++ N++V 
Sbjct: 336 EPFSKGHRCKNKELRLCVVADD-------LEDVEMVDSAYEGEMVEVSPVVELSLNSVVG 395

Query: 66  FTTE-TQKLKGAIQGREVVVMIDCRATHNFISQHVANDLKLHCIETSSYGVIMGLGTPVK 125
            T   T KLKG ++ +E+V+M+DC ATHNFIS  +  +LKL   ET++YGVIMG G  V+
Sbjct: 396 LTAPGTFKLKGTVENQEIVIMVDCGATHNFISLKLVENLKLPMAETTNYGVIMGSGKAVQ 455

Query: 126 GTGMCRGVVLNLPKITTKDDFLPLKLGSFDGKDDGVLGIQWLKRMRKMKVNWSVLMMSF 182
           G G+C+G+ + LP I+  +DFLPL+LG+     D VLG+QWL++   M V+W  L M+F
Sbjct: 456 GRGICKGITVGLPVISIVEDFLPLELGNI----DMVLGMQWLQKQGAMTVDWKALTMTF 503

[Close]

BLAST of Moc08g31400 vs. ExPASy TrEMBL
Match: A0A5D3DRT3 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00710 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 4.0e-30
Identity = 77/179 (43.02%), Postives = 117/179 (65.36%), Query Frame = 0


Query: 6   EKYSVGHKCKNQKLGVYVVHNDEIAEEEEMTEVEALNQAHGNEKGKV--VEFVAFNTLVA 65
           E +S GH+CKN++L + VV +D       + +VE ++ A+  E  +V  V  ++ N++V 
Sbjct: 336 EPFSKGHRCKNKELRLCVVADD-------LEDVEMVDSAYEGEMVEVSPVVELSLNSVVG 395

Query: 66  FTTE-TQKLKGAIQGREVVVMIDCRATHNFISQHVANDLKLHCIETSSYGVIMGLGTPVK 125
            T   T KLKG ++ +E+V+M+DC ATHNFIS  +  +LKL   ET++YGVIMG G  V+
Sbjct: 396 LTAPGTFKLKGTVENQEIVIMVDCGATHNFISLKLVENLKLPMAETTNYGVIMGSGKAVQ 455

Query: 126 GTGMCRGVVLNLPKITTKDDFLPLKLGSFDGKDDGVLGIQWLKRMRKMKVNWSVLMMSF 182
           G G+C+G+ + LP I+  +DFLPL+LG+     D VLG+QWL++   M V+W  L M+F
Sbjct: 456 GRGICKGITVGLPVISIVEDFLPLELGNI----DMVLGMQWLQKQGAMTVDWKALTMTF 503

[Close]

BLAST of Moc08g31400 vs. ExPASy TrEMBL
Match: A0A5D3DD68 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold359G00150 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 4.0e-30
Identity = 77/179 (43.02%), Postives = 117/179 (65.36%), Query Frame = 0


Query: 6   EKYSVGHKCKNQKLGVYVVHNDEIAEEEEMTEVEALNQAHGNEKGKV--VEFVAFNTLVA 65
           E +S GH+CKN++L + VV +D       + +VE ++ A+  E  +V  V  ++ N++V 
Sbjct: 336 EPFSKGHRCKNKELRLCVVADD-------LEDVEMVDSAYEGEMVEVSPVVELSLNSVVG 395

Query: 66  FTTE-TQKLKGAIQGREVVVMIDCRATHNFISQHVANDLKLHCIETSSYGVIMGLGTPVK 125
            T   T KLKG ++ +E+V+M+DC ATHNFIS  +  +LKL   ET++YGVIMG G  V+
Sbjct: 396 LTAPGTFKLKGTVENQEIVIMVDCGATHNFISLKLVENLKLPMAETTNYGVIMGSGKAVQ 455

Query: 126 GTGMCRGVVLNLPKITTKDDFLPLKLGSFDGKDDGVLGIQWLKRMRKMKVNWSVLMMSF 182
           G G+C+G+ + LP I+  +DFLPL+LG+     D VLG+QWL++   M V+W  L M+F
Sbjct: 456 GRGICKGITVGLPVISIVEDFLPLELGNI----DMVLGMQWLQKQGAMTVDWKALTMTF 503

[Close]

BLAST of Moc08g31400 vs. ExPASy TrEMBL
Match: A0A5D3DJA9 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1607G00370 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 4.0e-30
Identity = 77/179 (43.02%), Postives = 117/179 (65.36%), Query Frame = 0


Query: 6   EKYSVGHKCKNQKLGVYVVHNDEIAEEEEMTEVEALNQAHGNEKGKV--VEFVAFNTLVA 65
           E +S GH+CKN++L + VV +D       + +VE ++ A+  E  +V  V  ++ N++V 
Sbjct: 336 EPFSKGHRCKNKELRLCVVADD-------LEDVEMVDSAYEGEMVEVSPVVELSLNSVVG 395

Query: 66  FTTE-TQKLKGAIQGREVVVMIDCRATHNFISQHVANDLKLHCIETSSYGVIMGLGTPVK 125
            T   T KLKG ++ +E+V+M+DC ATHNFIS  +  +LKL   ET++YGVIMG G  V+
Sbjct: 396 LTAPGTFKLKGTVENQEIVIMVDCGATHNFISLKLVENLKLPMAETTNYGVIMGSGKAVQ 455

Query: 126 GTGMCRGVVLNLPKITTKDDFLPLKLGSFDGKDDGVLGIQWLKRMRKMKVNWSVLMMSF 182
           G G+C+G+ + LP I+  +DFLPL+LG+     D VLG+QWL++   M V+W  L M+F
Sbjct: 456 GRGICKGITVGLPVISIVEDFLPLELGNI----DMVLGMQWLQKQGAMTVDWKALTMTF 503

[Close]

BLAST of Moc08g31400 vs. TAIR 10
Match: AT3G29750.1 (Eukaryotic aspartyl protease family protein )

HSP 1 Score: 62.8 bits (151), Expect = 1.7e-09
Identity = 43/132 (32.58%), Postives = 64/132 (48.48%), Query Frame = 0


Query: 73  GAIQGREVVVMIDCRATHNFISQHVANDLKLHCIETSSYGVIMGLGTPVKGTGMCRGVVL 132
           G I   +VVV ID  AT NFI   +A  LKL    T+   V++G    ++  G C G+ L
Sbjct: 128 GFILDHKVVVAIDSGATDNFILVELAFSLKLPTSITNQASVLLGQRQCIQSVGTCLGIRL 187

Query: 133 NLPKITTKDDFLPLKLGSFDGKDDGVLGIQWLKRMRKMKVNWSVLMMSFKRDREALVSWK 192
            + ++   ++FL L L   D   D +LG +WL ++ +  VNW     SF  +++    W 
Sbjct: 188 WVQEVEITENFLLLDLAKTD--VDVILGYEWLSKLGETMVNWQNQDFSFSHNQQ----WI 247

Query: 193 NLPEEKATWEAV 205
            L  E    E V
Sbjct: 248 TLCAEHEELEQV 253

[Close]

BLAST of Moc08g31400 vs. TAIR 10
Match: AT3G30770.1 (Eukaryotic aspartyl protease family protein )

HSP 1 Score: 51.2 bits (121), Expect = 5.2e-06
Identity = 50/171 (29.24%), Postives = 82/171 (47.95%), Query Frame = 0


Query: 25  HNDEIAEEEEMT--EVEALNQAHGNE-KGKVVEFVAFNTLV-AFTTETQKLK-----GAI 84
           + D+  + E M+   VE     +GNE +G + +F     +    TTE  K K     G I
Sbjct: 231 YGDQATQVELMSFIMVEGNTYGYGNEWEGLLEDFKTIRQVKRQSTTEFTKGKDMRFYGFI 290

Query: 85  QGREVVVMIDCRATHNFISQHVANDLKLHCIETSSYGVIMGLGTPVKGTGMCRGVVLNLP 144
              +VVV+ID  AT+NFIS  +A  LKL    T+   V++G    ++  G C G+ L + 
Sbjct: 291 SCHKVVVVIDSGATNNFISDELALVLKLPTSTTNQASVLLGQRQCIQTIGTCFGINLLVQ 350

Query: 145 KITTKDDFLPLKLGSFDGKDDGVLGIQWLKRMRKMKVNWSVLMMSFKRDRE 187
           ++   ++FL L L   D   D +LG    + + +  + W     SF  +++
Sbjct: 351 EVEINENFLLLDLTKTD--VDVILGYGGSQNLERQWLIWLNQDFSFFHNQQ 399

The following BLAST results are available for this feature:

BLAST of Moc08g31400 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022154744.1	5.3e-37	47.06	uncharacterized protein LOC111021922 [Momordica charantia]	[more]
XP_022848903.1	2.8e-30	45.51	uncharacterized protein LOC111371244 [Olea europaea var. sylvestris]	[more]
TYK21209.1	8.2e-30	43.02	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK10423.1	8.2e-30	43.02	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK23724.1	8.2e-30	43.02	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]

BLAST of Moc08g31400 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc08g31400 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DN22	2.6e-37	47.06	Reverse transcriptase OS=Momordica charantia OX=3673 GN=LOC111021922 PE=4 SV=1	[more]
A0A5D3CEX8	4.0e-30	43.02	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5D3DRT3	4.0e-30	43.02	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5D3DD68	4.0e-30	43.02	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5D3DJA9	4.0e-30	43.02	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]

BLAST of Moc08g31400 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G29750.1	1.7e-09	32.58	Eukaryotic aspartyl protease family protein	[more]
AT3G30770.1	5.2e-06	29.24	Eukaryotic aspartyl protease family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 785..805
None	No IPR available	PFAM	PF08284	RVP_2	coord: 76..169 e-value: 9.1E-5 score: 22.3
None	No IPR available	PFAM	PF04195	Transposase_28	coord: 342..385 e-value: 4.3E-8 score: 33.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 275..292
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 254..293
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 908..933
None	No IPR available	PANTHER	PTHR34482	DNA DAMAGE-INDUCIBLE PROTEIN 1-LIKE	coord: 6..207
None	No IPR available	PANTHER	PTHR34482:SF20	SUBFAMILY NOT NAMED	coord: 6..207
None	No IPR available	CDD	cd00303	retropepsin_like	coord: 71..165 e-value: 7.4686E-14 score: 66.206
IPR021109	Aspartic peptidase domain superfamily	GENE3D	2.40.70.10	Acid Proteases	coord: 70..193 e-value: 2.5E-12 score: 48.7

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc08g31400.1	Moc08g31400.1	mRNA