Moc08g23020 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc08g23020
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111019515
Locationchr8: 16788550 .. 16790153 (-)
RNA-Seq ExpressionMoc08g23020
SyntenyMoc08g23020
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTTTAGGAGGGATGTCGATGAGCGGGTATCAACCGGGTCCTATGTATTCACAAGGTCGGAGTTTTGGAATGTCATTGAGACCTCTTGAGCCTCCTTTAATGCCCACTACTACATCTAGCACCCGACCACCTTTACCTACCCAAAAGTTCATCCCTATGGCTCCCTCTTATAGTGCTCCAAGTAACCCACCTCTTCCTTTAGAACCTTTCGTCCAAAAGAAAGATCATGTGATTGTTGAAAATAAAGGAAAAAAGATACCAAGCAAAGAGAATTTTGATGAATTGGGGCACCCACAAGAGAGTCGACAATGGAAACACAAAGGAGGAAGTTCAGAGGTGCAAAGCATGGAAATTGATGAAGGTTTGGATGCAGAAGTTGAGGCTAGGCGCCTAGCGCCTCCCTCGGAGACAGTGGGCGGAAAATCAAGAAAACGAGCCGGTTCATGAAAGTTATCTAGTGGATCAGCGAAGAAGAGTAGGGAGGATGAATTTCGAAGGTACACATCTGAGGAATGGGAAGCAATGTTCGAAGATGCTAGGAGGATTGCTAGTCAAATAGCTTGGAGAGCTTGTTATATGCAACCTCCTATACAATCGCCAATAAGATCCAGAACAGTAAGTCTCCAAGAAGAGGAGATAGCGGTTGAACGACAGTTACCCTTGATATTTCCACAGAAACGTTATCCAAAAGTTCATAGAAAGAGGTAACTAAACCTACACAAAAAGAGGGAGATTGTGTAACGCCACAGGCCACCGTACCTGACATTGGAGTTCAAGCTATCGTGGACAAAGGAATATCACCATCTTTGGAAATTTATGGTGCTTGGGAAGTTGAGTCCTATCCCTCCTTGCTGGCTTCGAATGCTTTTAATGCCCCTCCAGTAAATTTTATTCAAAGAGAGCATTCCATACGATCCCATCAGTTTGAGAGAAAGAAGTCCATACAACGGGGATACTGTAGTGATAGGGGTAGGAAATTCTTGGACAGCACCTCTAACTGAAAATCATTCAGTAGCATCATCTTCGTCGTCGAATCCACGGGTTGTACCATCAGTCAACACTGACACAGAAGATAGGATCCCCATCAGGGAGCTTTTCTGGCGTAGAAGGCAGCCAAAAGCAACGCCAAGGAAGAGAATGCCAAAGCACAAGACGATCAGGCTAACTTCATATGAACCTAAGACTCGAGTAGCTAAGGCTCGTGCTGCTATGACTAGAGGGTCATCTTCTGTACTGATACCGACTCTCGTGATGTTAGTGACGAGCTCGAGACTCAATGGAAGCCATCCAATCTTAGGAAGCGTAGCGGGTGGAACAAATCAAGGAAGCTATTGGTTGAGCTGGGCTTAGATTTAGATCTTCCAGTTATCCCGGACATGTGGCGAGAGGTGGCTCAAGAAAAGAAATGGTTACGCCTGCTAGAATCAATGAGCTGTGTGGCAATTAATGTAGTGCGGGAATTTTATTCATCCGTTCACCCTCAGTCGGATATGGTAACGGTGCAAGGGAAAAAGGTTTGCTTTGATATTAACCACTTGTATGAGCCTCCTGACTACCAGAACGCTCTTGGGAATCAGATTTTATTCGATCCATCTGAATAA

mRNA sequence

ATGTTTTTAGGAGGGATGTCGATGAGCGGGTATCAACCGGGTCCTATGTATTCACAAGGTCGGAGTTTTGGAATGTCATTGAGACCTCTTGAGCCTCCTTTAATGCCCACTACTACATCTAGCACCCGACCACCTTTACCTACCCAAAAGTTCATCCCTATGGCTCCCTCTTATAGTGCTCCAAGTAACCCACCTCTTCCTTTAGAACCTTTCGTCCAAAAGAAAGATCATGTGATTGTTGAAAATAAAGGAAAAAAGATACCAAGCAAAGAGAATTTTGATGAATTGGGGCACCCACAAGAGAGTCGACAATGGAAACACAAAGGAGGAAGTTCAGAGGTGCAAAGCATGGAAATTGATGAAGGTTTGGATGCAGAAGTTGAGGCTAGGCGCCTAGCGCCTCCCTCGGAGACAGCCACCGTACCTGACATTGGAGTTCAAGCTATCGTGGACAAAGGAATATCACCATCTTTGGAAATTTATGGTGCTTGGGAAGTTGAGTCCTATCCCTCCTTGCTGGCTTCGAATGCTTTTAATGCCCCTCCAAGGGTCATCTTCTGTACTGATACCGACTCTCGTGATGTTAGTGACGAGCTCGAGACTCAATGGAAGCCATCCAATCTTAGGAAGCGTAGCGGGTGGAACAAATCAAGGAAGCTATTGGTTGAGCTGGGCTTAGATTTAGATCTTCCAGTTATCCCGGACATGTGGCGAGAGGTGGCTCAAGAAAAGAAATGGTTACGCCTGCTAGAATCAATGAGCTGTGTGGCAATTAATGTAGTGCGGGAATTTTATTCATCCGTTCACCCTCAGTCGGATATGGTAACGGTGCAAGGGAAAAAGGTTTGCTTTGATATTAACCACTTGTATGAGCCTCCTGACTACCAGAACGCTCTTGGGAATCAGATTTTATTCGATCCATCTGAATAA

Coding sequence (CDS)

ATGTTTTTAGGAGGGATGTCGATGAGCGGGTATCAACCGGGTCCTATGTATTCACAAGGTCGGAGTTTTGGAATGTCATTGAGACCTCTTGAGCCTCCTTTAATGCCCACTACTACATCTAGCACCCGACCACCTTTACCTACCCAAAAGTTCATCCCTATGGCTCCCTCTTATAGTGCTCCAAGTAACCCACCTCTTCCTTTAGAACCTTTCGTCCAAAAGAAAGATCATGTGATTGTTGAAAATAAAGGAAAAAAGATACCAAGCAAAGAGAATTTTGATGAATTGGGGCACCCACAAGAGAGTCGACAATGGAAACACAAAGGAGGAAGTTCAGAGGTGCAAAGCATGGAAATTGATGAAGGTTTGGATGCAGAAGTTGAGGCTAGGCGCCTAGCGCCTCCCTCGGAGACAGCCACCGTACCTGACATTGGAGTTCAAGCTATCGTGGACAAAGGAATATCACCATCTTTGGAAATTTATGGTGCTTGGGAAGTTGAGTCCTATCCCTCCTTGCTGGCTTCGAATGCTTTTAATGCCCCTCCAAGGGTCATCTTCTGTACTGATACCGACTCTCGTGATGTTAGTGACGAGCTCGAGACTCAATGGAAGCCATCCAATCTTAGGAAGCGTAGCGGGTGGAACAAATCAAGGAAGCTATTGGTTGAGCTGGGCTTAGATTTAGATCTTCCAGTTATCCCGGACATGTGGCGAGAGGTGGCTCAAGAAAAGAAATGGTTACGCCTGCTAGAATCAATGAGCTGTGTGGCAATTAATGTAGTGCGGGAATTTTATTCATCCGTTCACCCTCAGTCGGATATGGTAACGGTGCAAGGGAAAAAGGTTTGCTTTGATATTAACCACTTGTATGAGCCTCCTGACTACCAGAACGCTCTTGGGAATCAGATTTTATTCGATCCATCTGAATAA

Protein sequence

MFLGGMSMSGYQPGPMYSQGRSFGMSLRPLEPPLMPTTTSSTRPPLPTQKFIPMAPSYSAPSNPPLPLEPFVQKKDHVIVENKGKKIPSKENFDELGHPQESRQWKHKGGSSEVQSMEIDEGLDAEVEARRLAPPSETATVPDIGVQAIVDKGISPSLEIYGAWEVESYPSLLASNAFNAPPRVIFCTDTDSRDVSDELETQWKPSNLRKRSGWNKSRKLLVELGLDLDLPVIPDMWREVAQEKKWLRLLESMSCVAINVVREFYSSVHPQSDMVTVQGKKVCFDINHLYEPPDYQNALGNQILFDPSE
Homology
[Close]
BLAST of Moc08g23020 vs. NCBI nr
Match: XP_022151603.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111019515 [Momordica charantia])

HSP 1 Score: 101.7 bits (252), Expect = 1.2e-17
Identity = 45/115 (39.13%), Postives = 76/115 (66.09%), Query Frame = 0 

Query: 197  DELETQWKPSNLRKRSGWNKSRKLLVELGLDLDLPVIPDMWREVAQEKKWLRLLESMSCV 256
            +++ET W  +NL  R+   K  K++ ELG DL L  +PD WR+ A+ K+W  L++ + C 
Sbjct: 1229 EKVETTWNAANLATRTSLMKFHKIMTELGFDLTLGDVPDDWRDTARAKEWRPLIQPIQCE 1288

Query: 257  AINVVREFYSSVHPQSDMVTVQGKKVCFD---INHLYEPPDYQNALGNQILFDPS 309
            A+ +VREFY++ HPQS +  V+GK++ FD   IN+ +   + ++A+GN++L  P+
Sbjct: 1289 ALELVREFYAADHPQSHIAIVRGKEIRFDATQINYTFNIKNIKDAVGNKMLVTPT 1343

[Close]
BLAST of Moc08g23020 vs. NCBI nr
Match: XP_038898613.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC120086174 [Benincasa hispida])

HSP 1 Score: 60.1 bits (144), Expect = 4.0e-05
Identity = 39/122 (31.97%), Postives = 63/122 (51.64%), Query Frame = 0 

Query: 193 RDVSDELETQWKPSNLRKRSGWNKSR-KLLVELGLDLDLPVIPDMWREVAQEKKWLRLLE 252
           +DV++  E    P++ +KRS   K    +L+E+G       +PD+   +  E  W    +
Sbjct: 184 KDVAESSE----PASAKKRSAKRKENDDMLIEMGFYPAPTPLPDLITSIIVEHGWDTFYQ 243

Query: 253 SMSCVAINVVREFY-SSVHPQSDMVTVQGKKVCF---DINHLYEPPDYQNALGNQILFDP 310
             S +   VV +FY   +H   D VT +G+ V F   +IN LY+  D  +A GN+I+ DP
Sbjct: 244 CPSIIVPQVVHDFYRGHLHENRDAVTFKGETVYFSTKNINGLYQMRDNPDAPGNKIIDDP 301

[Close]
BLAST of Moc08g23020 vs. ExPASy TrEMBL
Match: A0A6J1DCL7 (LOW QUALITY PROTEIN: uncharacterized protein LOC111019515 OS=Momordica charantia OX=3673 GN=LOC111019515 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 5.7e-18
Identity = 45/115 (39.13%), Postives = 76/115 (66.09%), Query Frame = 0 

Query: 197  DELETQWKPSNLRKRSGWNKSRKLLVELGLDLDLPVIPDMWREVAQEKKWLRLLESMSCV 256
            +++ET W  +NL  R+   K  K++ ELG DL L  +PD WR+ A+ K+W  L++ + C 
Sbjct: 1229 EKVETTWNAANLATRTSLMKFHKIMTELGFDLTLGDVPDDWRDTARAKEWRPLIQPIQCE 1288

Query: 257  AINVVREFYSSVHPQSDMVTVQGKKVCFD---INHLYEPPDYQNALGNQILFDPS 309
            A+ +VREFY++ HPQS +  V+GK++ FD   IN+ +   + ++A+GN++L  P+
Sbjct: 1289 ALELVREFYAADHPQSHIAIVRGKEIRFDATQINYTFNIKNIKDAVGNKMLVTPT 1343

The following BLAST results are available for this feature:
BLAST of Moc08g23020 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022151603.11.2e-1739.13LOW QUALITY PROTEIN: uncharacterized protein LOC111019515 [Momordica charantia][more]
XP_038898613.14.0e-0531.97LOW QUALITY PROTEIN: uncharacterized protein LOC120086174 [Benincasa hispida][more]
BLAST of Moc08g23020 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc08g23020 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DCL75.7e-1839.13LOW QUALITY PROTEIN: uncharacterized protein LOC111019515 OS=Momordica charantia... [more]
BLAST of Moc08g23020 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 19..45
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 83..116
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 83..108

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc08g23020.1Moc08g23020.1mRNA