Moc08g22680 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc08g22680
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Locationchr8: 16593977 .. 16598078 (+)
RNA-Seq ExpressionMoc08g22680
SyntenyMoc08g22680
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGCGTCCTCGTCGTAGGCGCAATCAAGCACAGCCAAATGAAGAAGTTCAAGAAGAAGCACAAGAAGCTGAACAAGTTCAGGAACAAAATGAAGATGCTATAGGAGATGAACAGACTATGAATACTCCTATACAATCACATTTTCTAATGATTCCTACGCCAAGAGTTCATTTAGACACCGCATCTACTTCAGCTCTTCAACCTGACCCATCACCTGTTCAACAAGAACCTCGTCGTGGACGCGTAAGAAGGCCACGACAATGTGGTACATGATTATCTATGCTTTGTAATATGTTTAAAAGTTTAAGACAACTTTTTGTATCGAATATATTTTAAAACTTTTATCCAAAAGTAGCTTTTAGTTTAATTTTAAAACTTTAAACTTTAATCACATTTTAATCAAAATTTAAAATATAATAACAAAAATTAAAATAATTAATTGCATCTTAATTAAAAATTTCGCAATATTAATAAAATAAATTTTGCAATATTAATAAAAGTAATAATAAAAAAATATATGAAAACTCAATATTAATAAAATTAATTTTGCAATATTAATAAAAGTAACAATAAAAAATATATACCAAAACTCACTAAAAAAAGAGATGAAAAATGTTTGAAAGGATGCATGCGACTTCCGCGAAAAAAAAAAAGAAAAATTTGCGGAAGTCGCGTGCGTGGGACGCGACTTCAATAAGGGGGAAGTCGCGTGCATCAGCTGCGATTTCCGTGGAAGTCGCGTCCATCGTGGAAGTCGCATCCATTGTACGCGACTTCCACGTCAATAATACCTCACCCGTCACATAGACAATACACGTTGCACGGAAGTAGCGTCCATTGTATGCGAGTTTTGACCCCTCCTTTGACCTAATCTATTTTTGTCAATAGTTTCAAAAACCTAATTACTTTTGTATTTATTTATTTAATTTACATTTATTTAGTTATTATTTTTAAATTAACATTATTTTTGTAATTTCTTTTTAAAATGTCATTATTTTAAAACTTAACCCATTTAAATAGGGGAGGGAAGTGAAAAAAATGATTTGAAAATAAAATCAAAATTAGAACCTTGGATCATAATGATTCAAAATGAAGGATGAAGATTAAATTCTAAAAAGTAATGATTACATTATATTATATAATATATTATAAAATAAAATAAAATAATATAATACATATATATGTATAACGGTAAGTTTGATTTTTTTTTCTTTTTTCTTTTCTTTTTCTTTAAACGGTAACTTTGTTTTTCAATTTCTTTTCATTTTCATTTTTTTCTTTTCAATCTTTGTTTCTTCTTCTTTCTTTGTTTCTTTTTTTTTCAACAATACATCTCGCCATGTATCAACATAAAATTCGCCCATGTCATCTTCTTAGGTATTTTCCATTCGATTTCTTTCGATCATAACTTCTTCATTTAAATTCCGACTTGAACGATTCAAATTGCGTTGGATTCGTCTTTTCAAGCTCTACACTTTGAACACTTTGAAACACAAAAATCATCAGCAGATTAAGTTTATTATCATCAAACATATGGTATGATTGAAGCTCGAAAAGCCAACATTCTCTCTTGAAAATAACCTCCCCCCCCACCCTCATTTAGGTTAAAGGAAGATTTAAAAACGTAGAATCTGTCTGCAGTGCCTACGCGTCCAATTTCGGCACATGGGCGACCGAACGTATATCGGTAAAATCACTGTCTCCACTTTAGGTGCCTAGCCAACCATTTTGTTGTGCGCTTAAATATCGTGGCGCCTAAGTGCCTAACATGCTAAAAAATTAGCTCATTTTTCTCTTGAATTGCTTTTTTTTCCCATTTCTTTAAATGAACTCATAAAAAAGGAAGAAGAAAAAAATAACAAACTAGACATAATAAACTGGCAATGAAAAACCCACAAAAAAAAATATATAAAATAACTAAAAAAAACACCCCAATTACTAATCCAAAAAATGAGTTATCAAATAACTGTTTTTTTATTTTGTTTTCTTATTTTGTAAAATTAAGTTTATAAATACTACATTACCTAGAGGTTGATTTAGATAGTAGTTATGGGAGGCCGACAAATTATGTTATATAAATGCAGTAAAAATATCATTTAAGTTAGTTAAGGGGGATAAGAATGCGTAGGTGTACCAAGCACATAAAATTAAGTTCGAATGACGATAATATCATTGCAATATATCTCATTTAATTCATTGAACCTAACTTGTATCTATCGATTTTAAGGATGAATATACCAACATGATCGTAGCTCATAGTAATTAGCACCTATCTCTGATCAAGAGATTATGAGTTCGAATTCTTCACCTTCACTTATTGTACTAAAAAAAAAGTTATGGATGAATATAATAATAATAATTTTATTATTATTTTGAGTTTTTTTGTTTATAACTTATGATTCTATATATAAAAATTATTAACATGGGATTGATAACTTTGTAATTCAAAATTGAGTGTTAGACGAAATGGAAGTATTGAAAATTCATGTTAATGTCATATATTTGCCAAACTATCACGAGTTTGAGTTATTAAGGGCTTGTTTGGTAATATTTTTATTTATTTATCTTATTTTTTATTTTTGAGAAACTATCACGAGTTTGAGTTATTAAGGACTTGTTTGGTAATACTTTTATTTATTTATCTTATTTTTTATTTTTAGAAACATAAGTGTCTGATGATTCTTTTTTTCCTCATTTTTCTTTTCTAAGAAACATTTCTATATATATATATATATATATTTTCTAAACAATTTTGGAAACAACACAAGTTTCTTTTTTTTTTTCCTTTAAATTTTTTTACTAAATATAAATAAAATAATTATTGTTTCTTTTTTTTTTTCCTTTAAATTTTTTTACTAAATATAAATGAAATAATTATTTTATCATTCTTGACGTATAAAGCATAAAATTAATATTAAAACATAAACAATATAAAAATTTTGAAGGTTAAATTTTTAACGTTCCATAAAAAATTATTTAAAATTGGAGAGAAAGAGAAAGAGAAACACGAAGTGATAACTAAACGTGTTTATGTTTCCTTTTCAAAAAAAGAAAAAAAAAAGACAACTTTACATTGAGTGGCAGAAATATATAATGGGGATTTGTCATTAAAGGAAGATCTGAAATAACAAACTCACGGAGCTCCATCTCGGAACCGTCCGAGATGAAAAATTTCCCATTTTTTGTGAAGAATCAACTTATCGTTTCCGGGAAAGTGTTAGAGCTCGACCTGCTGCAGCCCGACACGACCAACCTCAAAACCGACCAAGTTAATCGCCTGTCGCAACCTCTATCGGAACCTAAACCTATAAATAGAGGACCCTATTTCACCATCAGGTATCGAATTTCTCCTCGAACCTAATATTGAGTCCGAGCTGCTTACTGATTTGAGCGTCGGAGATTTTGCCCTCTTGTGCAGGTTTTCCCTTTAAGTTTCAGGTCGGAGATGGGACCGGGTTTGAGTTAATTTGAGGTTGTGCAATTTTTTGCATAAACATTTGTCGCCGTCTGTGGGAAAAGGACAACTTAAGTCATCCGAGAAACAAATGGTTCGAGATGGTGCAGCTAGCACATTCCGCTAATACGACGGAACGGAGAAATTTGAATGGAAACAATGGCACTCAACGCGAGCTTGATGCCAAATTGGCTGACGATCAGGTCCGAGCAGGACAAGAGGTAGACCTACCACAAAGATCTACCTGTCACGCGAACCTAGACTTGCCTCATGCCTATCCCTGCCAGAACTAACCGAGGTCGAGGTGGGACCTCAAAGAAAACTTCTCGAAGGGTTGCGCCAGCCGCAGACCCCGAAGTCCTTGCTACCTTTCAGCGGAAACTGAACAACATGCGTAACCAAGTGCGCACCATGGAAGAGACTTACAATGAAATGATGCGAGTGAATCGGTCTGGGTCCCAGTCTAAGGCCCCATGCGGAATAGACGACCTGCCAGACGATGAAGATGATCAGGATCCACCCCTCCACCCGGACGACTATGAGCCCGTTGCAGACAATGGGGGGGGGGGGTTGACTATAGCTTGCGGGACCACGACCTCAGAAAGCACCTTGTTGATAAGAAGAGGAAGGCCTCAAGTGGCCTAG

mRNA sequence

ATGAGGCGTCCTCGTCGTAGGCGCAATCAAGCACAGCCAAATGAAGAAGTTCAAGAAGAAGCACAAGAAGCTGAACAAGTTCAGGAACAAAATGAAGATGCTATAGGAGATGAACAGACTATGAATACTCCTATACAATCACATTTTCTAATGATTCCTACGCCAAGAGTTCATTTAGACACCGCATCTACTTCAGCTCTTCAACCTGACCCATCACCTGTTCAACAAGAACCTCGTCGTGGACGCCTAGCACATTCCGCTAATACGACGGAACGGAGAAATTTGAATGGAAACAATGGCACTCAACGCGAGCTTGATGCCAAATTGGCTGACGATCAGGTCCGAGCAGGACAAGAGAAAACTTCTCGAAGGGTTGCGCCAGCCGCAGACCCCGAAGTCCTTGCTACCTTTCAGCGGAAACTGAACAACATGCGTAACCAAGTGCGCACCATGGAAGAGACTTACAATGAAATGATGCGAGTGAATCGGTCTGGGTCCCAGTCTAAGGCCCCATGCGGAATAGACGACCTGCCAGACGATGAAGATGATCAGGATCCACCCCTCCACCCGGACGACTATGAGCCCGTTGCAGACAATGGGGGGGGGGGGTTGACTATAGCTTGCGGGACCACGACCTCAGAAAGCACCTTGTTGATAAGAAGAGGAAGGCCTCAAGTGGCCTAG

Coding sequence (CDS)

ATGAGGCGTCCTCGTCGTAGGCGCAATCAAGCACAGCCAAATGAAGAAGTTCAAGAAGAAGCACAAGAAGCTGAACAAGTTCAGGAACAAAATGAAGATGCTATAGGAGATGAACAGACTATGAATACTCCTATACAATCACATTTTCTAATGATTCCTACGCCAAGAGTTCATTTAGACACCGCATCTACTTCAGCTCTTCAACCTGACCCATCACCTGTTCAACAAGAACCTCGTCGTGGACGCCTAGCACATTCCGCTAATACGACGGAACGGAGAAATTTGAATGGAAACAATGGCACTCAACGCGAGCTTGATGCCAAATTGGCTGACGATCAGGTCCGAGCAGGACAAGAGAAAACTTCTCGAAGGGTTGCGCCAGCCGCAGACCCCGAAGTCCTTGCTACCTTTCAGCGGAAACTGAACAACATGCGTAACCAAGTGCGCACCATGGAAGAGACTTACAATGAAATGATGCGAGTGAATCGGTCTGGGTCCCAGTCTAAGGCCCCATGCGGAATAGACGACCTGCCAGACGATGAAGATGATCAGGATCCACCCCTCCACCCGGACGACTATGAGCCCGTTGCAGACAATGGGGGGGGGGGGTTGACTATAGCTTGCGGGACCACGACCTCAGAAAGCACCTTGTTGATAAGAAGAGGAAGGCCTCAAGTGGCCTAG

Protein sequence

MRRPRRRRNQAQPNEEVQEEAQEAEQVQEQNEDAIGDEQTMNTPIQSHFLMIPTPRVHLDTASTSALQPDPSPVQQEPRRGRLAHSANTTERRNLNGNNGTQRELDAKLADDQVRAGQEKTSRRVAPAADPEVLATFQRKLNNMRNQVRTMEETYNEMMRVNRSGSQSKAPCGIDDLPDDEDDQDPPLHPDDYEPVADNGGGGLTIACGTTTSESTLLIRRGRPQVA
Homology
[Close]
BLAST of Moc08g22680 vs. NCBI nr
Match: XP_022156638.1 (uncharacterized protein LOC111023488 [Momordica charantia])

HSP 1 Score: 74.3 bits (181), Expect = 1.5e-09
Identity = 50/116 (43.10%), Postives = 61/116 (52.59%), Query Frame = 0 

Query: 86  SANTTERRNLNGNNGTQRELDAKLADDQVRAGQEKTSRRVAPAADPEVLATFQRKLNNMR 145
           SANT ERR LNGNN  Q ELDAK+ ++Q +AGQE          DP   +T        R
Sbjct: 7   SANTAERRALNGNNDAQHELDAKVTEEQTKAGQE---------VDPPRRST--------R 66

Query: 146 NQVRTMEETYNEMMRVNRSGSQSKAPCGIDDLPDDEDDQDPPLHPDDYEPVADNGG 202
           N    +   +    + NR         G DDLP+D DD DPP+HPDDYEP  +N G
Sbjct: 67  NANTILPPAHPRSGKANRGRGG-----GTDDLPEDGDDLDPPIHPDDYEPAVENKG 100

[Close]
BLAST of Moc08g22680 vs. NCBI nr
Match: XP_022157193.1 (uncharacterized protein LOC111023967 [Momordica charantia])

HSP 1 Score: 73.9 bits (180), Expect = 1.9e-09
Identity = 37/50 (74.00%), Postives = 40/50 (80.00%), Query Frame = 0 

Query: 151 MEETYNEMMRVNRSGSQSKAPCGIDDLPDDEDDQDPPLHPDDYEPVADNG 201
           MEETYN+MM VNR  SQS  P G+DDL DD DDQD P HPDDYEP+ADNG
Sbjct: 1   MEETYNKMMWVNRIRSQSYVPGGVDDLLDDGDDQDLPFHPDDYEPIADNG 50

[Close]
BLAST of Moc08g22680 vs. ExPASy TrEMBL
Match: A0A6J1DR60 (uncharacterized protein LOC111023488 OS=Momordica charantia OX=3673 GN=LOC111023488 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 7.2e-10
Identity = 50/116 (43.10%), Postives = 61/116 (52.59%), Query Frame = 0 

Query: 86  SANTTERRNLNGNNGTQRELDAKLADDQVRAGQEKTSRRVAPAADPEVLATFQRKLNNMR 145
           SANT ERR LNGNN  Q ELDAK+ ++Q +AGQE          DP   +T        R
Sbjct: 7   SANTAERRALNGNNDAQHELDAKVTEEQTKAGQE---------VDPPRRST--------R 66

Query: 146 NQVRTMEETYNEMMRVNRSGSQSKAPCGIDDLPDDEDDQDPPLHPDDYEPVADNGG 202
           N    +   +    + NR         G DDLP+D DD DPP+HPDDYEP  +N G
Sbjct: 67  NANTILPPAHPRSGKANRGRGG-----GTDDLPEDGDDLDPPIHPDDYEPAVENKG 100

[Close]
BLAST of Moc08g22680 vs. ExPASy TrEMBL
Match: A0A6J1DSR0 (uncharacterized protein LOC111023967 OS=Momordica charantia OX=3673 GN=LOC111023967 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 9.4e-10
Identity = 37/50 (74.00%), Postives = 40/50 (80.00%), Query Frame = 0 

Query: 151 MEETYNEMMRVNRSGSQSKAPCGIDDLPDDEDDQDPPLHPDDYEPVADNG 201
           MEETYN+MM VNR  SQS  P G+DDL DD DDQD P HPDDYEP+ADNG
Sbjct: 1   MEETYNKMMWVNRIRSQSYVPGGVDDLLDDGDDQDLPFHPDDYEPIADNG 50

The following BLAST results are available for this feature:
BLAST of Moc08g22680 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022156638.11.5e-0943.10uncharacterized protein LOC111023488 [Momordica charantia][more]
XP_022157193.11.9e-0974.00uncharacterized protein LOC111023967 [Momordica charantia][more]
BLAST of Moc08g22680 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc08g22680 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DR607.2e-1043.10uncharacterized protein LOC111023488 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A6J1DSR09.4e-1074.00uncharacterized protein LOC111023967 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
BLAST of Moc08g22680 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 134..161
NoneNo IPR availableCOILSCoilCoilcoord: 14..37
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 105..119
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..131
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 205..219
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 18..32
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 58..72
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 33..49
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 88..103
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 161..227

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc08g22680.1Moc08g22680.1mRNA