Moc08g18450 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc08g18450
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Unknown protein
Location	chr8: 13970054 .. 13970898 (+)
RNA-Seq Expression	Moc08g18450
Synteny	Moc08g18450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTAGGAGCGGGCCTCCCTACCATGGCCACTGTCCCGATAGGACCCGATGAACAATGTCCTGACAGTATCGTCGGTACATCTTCGCATGATCAACCGTCCCCCACCAATCCCCTCGGTCCAAGCATTGGCGAACAGCAGAGCAACGTCGTTGACGGCCTTTCGACGATTTCAACTGTTGAGGCGGGACCCGATCAGCCTTGTCGCCGATCTACCATCGATACAGCATCCCACGATGAACTGTCCTCCCTTACCAGAGTTGGTCAAACCACAGGTGAGGGAGCGTCCGCCTTAGTCGAGGCCCCATACACTACTGTGCCGAACAAGTTTGTCCCCTACATCTAATGACTCCACAACACACGATCAACTGTCCTCCACTACTCCCGACGTTCGAACCATCTATCCACCGTAACAGGTAATCCATCCACAACCGCCGACGTTGGATCGGACCTTACTATGTCTGAACAACATCAATTCTCTGCTACTCCTTTCGGTGTAACCACTTTCGAGCAACCTCCCAACATAATTGCAATGGACGCCACATTATCGAACCCTCCCCCTCATAATGAAGAGTGCTCGTTTAATCGAAATGTCATCTAACTACTTGTATCATTTTCTAAGTTGGCGTGAAGGAGTATACAAGCAAACCCGCATTGGATACGCTGTCGCCATGGGAACCGACGCAAAATATTGTCAATCTTGTGCCCGGGTACAACGAACCCTTCATACAAGCATTGAGTGAATGCGACTACGTGTACAAGGTGCACAACGTTGGTGACCATTGGATTCTCTGCGCTTTCGATCTGCACGTGGGAGAGATACTGGTGTATGATTCACTCCCATAA

mRNA sequence

ATGTTAGGAGCGGGCCTCCCTACCATGGCCACTGTCCCGATAGGACCCGATGAACAATGTCCTGACAGTATCGTCGGTACATCTTCGCATGATCAACCGTCCCCCACCAATCCCCTCGGTCCAAGCATTGGCGAACAGCAGAGCAACGTCGTTGACGGCCTTTCGACGATTTCAACTGTTGAGGCGGGACCCGATCAGCCTTGTCGCCGATCTACCATCGATACAGCATCCCACGATGAACTGTCCTCCCTTACCAGAGTTGGTCAAACCACAGGTGAGGGAGCGTCCGCCTTAGTCGAGGCCCCATACACTACTGTGCCGAACAAGTTTGAGTATACAAGCAAACCCGCATTGGATACGCTGTCGCCATGGGAACCGACGCAAAATATTGTCAATCTTGTGCCCGGGTACAACGAACCCTTCATACAAGCATTGAGTGAATGCGACTACGTGTACAAGGTGCACAACGTTGGTGACCATTGGATTCTCTGCGCTTTCGATCTGCACGTGGGAGAGATACTGGTGTATGATTCACTCCCATAA

Coding sequence (CDS)

ATGTTAGGAGCGGGCCTCCCTACCATGGCCACTGTCCCGATAGGACCCGATGAACAATGTCCTGACAGTATCGTCGGTACATCTTCGCATGATCAACCGTCCCCCACCAATCCCCTCGGTCCAAGCATTGGCGAACAGCAGAGCAACGTCGTTGACGGCCTTTCGACGATTTCAACTGTTGAGGCGGGACCCGATCAGCCTTGTCGCCGATCTACCATCGATACAGCATCCCACGATGAACTGTCCTCCCTTACCAGAGTTGGTCAAACCACAGGTGAGGGAGCGTCCGCCTTAGTCGAGGCCCCATACACTACTGTGCCGAACAAGTTTGAGTATACAAGCAAACCCGCATTGGATACGCTGTCGCCATGGGAACCGACGCAAAATATTGTCAATCTTGTGCCCGGGTACAACGAACCCTTCATACAAGCATTGAGTGAATGCGACTACGTGTACAAGGTGCACAACGTTGGTGACCATTGGATTCTCTGCGCTTTCGATCTGCACGTGGGAGAGATACTGGTGTATGATTCACTCCCATAA

Protein sequence

MLGAGLPTMATVPIGPDEQCPDSIVGTSSHDQPSPTNPLGPSIGEQQSNVVDGLSTISTVEAGPDQPCRRSTIDTASHDELSSLTRVGQTTGEGASALVEAPYTTVPNKFEYTSKPALDTLSPWEPTQNIVNLVPGYNEPFIQALSECDYVYKVHNVGDHWILCAFDLHVGEILVYDSLP

Homology

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BLAST of Moc08g18450 vs. ExPASy TrEMBL
Match: A0A6J1CPP7 (uncharacterized protein LOC111013439 OS=Momordica charantia OX=3673 GN=LOC111013439 PE=3 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 8.0e-04
Identity = 23/62 (37.10%), Postives = 37/62 (59.68%), Query Frame = 0


Query: 119 DTLSPWEPTQNIVNLVPGYNEPFIQALSECDYVYKVHNVGDHWILCAFDLHVGEILVYDS 178
           D +S W+  +  +  V G+   FI      D+VY + ++ +HW+L A +++  EILVYDS
Sbjct: 54  DIISTWDEHKECMEAVLGHAADFIPPWVSVDFVYGLLHIRNHWVLVAINMNESEILVYDS 113

Query: 179 LP 181
           LP
Sbjct: 114 LP 115

The following BLAST results are available for this feature:

BLAST of Moc08g18450 vs.


Match Name	E-value	Identity	Description

BLAST of Moc08g18450 vs.


Match Name	E-value	Identity	Description

BLAST of Moc08g18450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CPP7	8.0e-04	37.10	uncharacterized protein LOC111013439 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]

BLAST of Moc08g18450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.395.10	Adenoviral Proteinase; Chain A	coord: 112..180 e-value: 7.0E-6 score: 27.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..91
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..47
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 77..91
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..47
IPR038765	Papain-like cysteine peptidase superfamily	SUPERFAMILY	54001	Cysteine proteinases	coord: 144..180

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc08g18450.1	Moc08g18450.1	mRNA