Moc08g16540 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc08g16540
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionMuDRA-like transposase
Locationchr8: 12710097 .. 12711729 (-)
RNA-Seq ExpressionMoc08g16540
SyntenyMoc08g16540
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATGAGGAGACAACAACCGAACCACCTGGGTTGGTCCAACAGAAGGCTTGTCCGGGGTGTTTGAAGACAGTGAACCATCGACATCGTGTGGATTGCCACAGGGACAACCCATCACAGGAGAGCAACCGACTTTACACGTCCCATTTTCAGGCAGACCCGACGTACACGTTGGCAGAGTGTTCGTATCGAAGAATGACCTCCGACTAGTATTAGCAACTATGACAATGTGTAATAATAAGAAGTTCAAGGTTAAGAGATCAACGCAAAGTTTGTTTACCGTGCGATTCATTCACCGCACGTGCAGTTGGAGGATCATTGCGCGATCGGTTGGTAGAAGCAGAGTGTTTTGTATATCGAAGTATGTTGTTGAGCACACGTGTAGTGTCAATGTATTAAATGACCAGCACAGACAGGCTAGTAGTTGGGTTATTGCAAACTTGATTAAAGATGGCATAACCGGTACTGGACAGACATACCAAGTAAAACACATAATTCATGACGTGCGCACCAAGTTTGGTGTGCATATTAGTTATGACAAAGCACACCGTGGAAAGGAACTTGCATATCCTATACTGAGGGGATGGCCGGAAGACTCTTACACGCACATGCATGCATACGATGAGGCACTAAAGATTAAAAACCCGGACACCGTCTTTTAGATTGAAACAGAGGACTCGGTATATTTCAAATACACGTTCATGTCATTAGGGGCAAGCATCCGAGGGTTCAAGTCATTGACTCGCCGTCGTGATGTGTAGCACGATGCCACCCATGTCGATCCTGATGTCCCAACCGTGGATACAGATGTGAGAGGTAAGAGGAAGATGAAGAGTGGCAAAAAGCATCGCTGCAAATGCAAGTCTGGCCTGAGGATCTTGACTGAGCAGGTGGCCGCCATGGATATGCGGCTTGCAAATGTGGAACAGGTAGTCACTTCTATGGACGATCGCGTTGCTGGCATGAAAGGTGATTTGAAAAGCATTTGAAAGTTCTTGCATTGTCTAGTTAAGGTGCATACTCTATTAATGCTTTCTATGTCTCAATTAAACATGCTCTGACATTATGCTTGCTACATATAGGGTATACCAATCGATACTTCAGTTCTTCGAAAGAACAATGGTGGAGATGGAGACGCCACTGGCGACGGAGATTCTGCAGGACCGGTTGGTGGTAGTAAGTGTTCGACGAAGGACAAGGACGAATAGTGCGACGGTGAAAATGAGGCTGACAAAGGCACCAACGCAATTGGAGCGGAGCTTACCGACTGAGAAGATGAGGTTGGGGACGTGTTGAATGTACTAGAGGCTACGGAAGTGCCTCGAGATGTCGGTGGGACATTGAAAGAAATGGAAGCTGTGGAAACGAAGTAGTCCGACGTTTCGAAAACAGAACGTCCATCAATAGTGGACGTTGCGGTATTTGCGGGTGTGACGCAGCAAGTTACAGAACATCCGAAGGAGGTACTAGTCCCACAGACACCTAAGGTAAGTACGAATTATATTATTCTTATGCATTTCACTTAGTAACTACAGTTTGAATTAGTGACTATATTGTTTTACAGGACCAAGTCTTCGATGACTTTTCAAACACGGAATCGGATGAGCTCCTCGACGTCCAGTACAACCCCTAG

mRNA sequence

ATGCATGAGGAGACAACAACCGAACCACCTGGGTTGGTCCAACAGAAGGCTTGTCCGGGGTGTTTGAAGACAGTGAACCATCGACATCGTGTGGATTGCCACAGGGACAACCCATCACAGGAGAGCAACCGACTTTACACGTCCCATTTTCAGGCAGACCCGACGTACACGTTGGCAGAGTGTTCTTGGAGGATCATTGCGCGATCGGTTGGTAGAAGCAGAGTGTTTTGTATATCGAAGTATGTTGTTGAGCACACGTGTAGTGTCAATGTATTAAATGACCAGCACAGACAGGCTAGTAGTTGGGTTATTGCAAACTTGATTAAAGATGGCATAACCGGTACTGGACAGACATACCAAGTAAAACACATAATTCATGACGTGCGCACCAAGTTTGGTGTGCATATTAGTTATGACAAAGCACACCGTGGAAAGGAACTTGCATATCCTATACTGAGGGGATGGCCGGAAGACTCTTACACGCACATGCATGCATACGATGAGGCACTAAAGATTAAAAACCCGGACACCCACGATGCCACCCATGTCGATCCTGATGTCCCAACCGTGGATACAGATGTGAGAGGTAAGAGGAAGATGAAGAGTGGCAAAAAGCATCGCTGCAAATGCAAGTCTGGCCTGAGGATCTTGACTGAGCAGGTGGCCGCCATGGATATGCGGCTTGCAAATGTGGAACAGGGTATACCAATCGATACTTCAGTTCTTCGAAAGAACAATGGTGGAGATGGAGACGCCACTGGCGACGGAGATTCTGCAGGACCGGTTGGTGGTAAACGTCCATCAATAGTGGACGTTGCGGTATTTGCGGGTGTGACGCAGCAAGTTACAGAACATCCGAAGGAGGTACTAGTCCCACAGACACCTAAGGACCAAGTCTTCGATGACTTTTCAAACACGGAATCGGATGAGCTCCTCGACGTCCAGTACAACCCCTAG

Coding sequence (CDS)

ATGCATGAGGAGACAACAACCGAACCACCTGGGTTGGTCCAACAGAAGGCTTGTCCGGGGTGTTTGAAGACAGTGAACCATCGACATCGTGTGGATTGCCACAGGGACAACCCATCACAGGAGAGCAACCGACTTTACACGTCCCATTTTCAGGCAGACCCGACGTACACGTTGGCAGAGTGTTCTTGGAGGATCATTGCGCGATCGGTTGGTAGAAGCAGAGTGTTTTGTATATCGAAGTATGTTGTTGAGCACACGTGTAGTGTCAATGTATTAAATGACCAGCACAGACAGGCTAGTAGTTGGGTTATTGCAAACTTGATTAAAGATGGCATAACCGGTACTGGACAGACATACCAAGTAAAACACATAATTCATGACGTGCGCACCAAGTTTGGTGTGCATATTAGTTATGACAAAGCACACCGTGGAAAGGAACTTGCATATCCTATACTGAGGGGATGGCCGGAAGACTCTTACACGCACATGCATGCATACGATGAGGCACTAAAGATTAAAAACCCGGACACCCACGATGCCACCCATGTCGATCCTGATGTCCCAACCGTGGATACAGATGTGAGAGGTAAGAGGAAGATGAAGAGTGGCAAAAAGCATCGCTGCAAATGCAAGTCTGGCCTGAGGATCTTGACTGAGCAGGTGGCCGCCATGGATATGCGGCTTGCAAATGTGGAACAGGGTATACCAATCGATACTTCAGTTCTTCGAAAGAACAATGGTGGAGATGGAGACGCCACTGGCGACGGAGATTCTGCAGGACCGGTTGGTGGTAAACGTCCATCAATAGTGGACGTTGCGGTATTTGCGGGTGTGACGCAGCAAGTTACAGAACATCCGAAGGAGGTACTAGTCCCACAGACACCTAAGGACCAAGTCTTCGATGACTTTTCAAACACGGAATCGGATGAGCTCCTCGACGTCCAGTACAACCCCTAG

Protein sequence

MHEETTTEPPGLVQQKACPGCLKTVNHRHRVDCHRDNPSQESNRLYTSHFQADPTYTLAECSWRIIARSVGRSRVFCISKYVVEHTCSVNVLNDQHRQASSWVIANLIKDGITGTGQTYQVKHIIHDVRTKFGVHISYDKAHRGKELAYPILRGWPEDSYTHMHAYDEALKIKNPDTHDATHVDPDVPTVDTDVRGKRKMKSGKKHRCKCKSGLRILTEQVAAMDMRLANVEQGIPIDTSVLRKNNGGDGDATGDGDSAGPVGGKRPSIVDVAVFAGVTQQVTEHPKEVLVPQTPKDQVFDDFSNTESDELLDVQYNP
Homology
BLAST of Moc08g16540 vs. NCBI nr
Match: XP_022154925.1 (uncharacterized protein LOC111022071 [Momordica charantia])

HSP 1 Score: 176.8 bits (447), Expect = 3.0e-40
Identity = 80/145 (55.17%), Postives = 106/145 (73.10%), Query Frame = 0

Query: 37  NPSQESNRLYTSHFQADPTYTLA----ECSWRIIARSVGRSRVFCISKYVVEHTCSVNVL 96
           N +  SNR Y         + +      C+WR+ A SVG+S +FCISKYV  HTC+++ +
Sbjct: 219 NAAMRSNREYKVSRSTKSKFNVRCIDNTCNWRVAAHSVGKSSIFCISKYVDAHTCTIDSV 278

Query: 97  NDQHRQASSWVIANLIKDGITGTGQTYQVKHIIHDVRTKFGVHISYDKAHRGKELAYPIL 156
           N  H+QASSWV+ANLIKDG+ GTG+ Y++KHI  DVR ++GV+ISYDKAHR +ELAY I+
Sbjct: 279 NHDHKQASSWVVANLIKDGVAGTGRIYKIKHIKEDVRKEYGVNISYDKAHRARELAYTIV 338

Query: 157 RGWPEDSYTHMHAYDEALKIKNPDT 178
           RG P+DSY H+HAY EA+KI+NP T
Sbjct: 339 RGRPKDSYMHLHAYGEAIKIENPGT 363

BLAST of Moc08g16540 vs. NCBI nr
Match: XP_022154346.1 (uncharacterized protein LOC111021631 [Momordica charantia])

HSP 1 Score: 164.1 bits (414), Expect = 2.0e-36
Identity = 72/117 (61.54%), Postives = 93/117 (79.49%), Query Frame = 0

Query: 61  CSWRIIARSVGRSRVFCISKYVVEHTCSVNVLNDQHRQASSWVIANLIKDGITGTGQTYQ 120
           C+W++ A SVG+S +FCISKYV  HT +++ +N  H+QASSWV+ANLIKD + GTG+ Y+
Sbjct: 33  CNWKVAAHSVGKSWIFCISKYVHAHTYTIDTVNHDHKQASSWVVANLIKDRVPGTGRIYK 92

Query: 121 VKHIIHDVRTKFGVHISYDKAHRGKELAYPILRGWPEDSYTHMHAYDEALKIKNPDT 178
           +KHI  DVR +FGV ISYDKAHR +ELAY I+RG  EDSY H+HAY E +KI+NP T
Sbjct: 93  IKHIKEDVRKEFGVTISYDKAHRARELAYAIVRGRQEDSYMHLHAYGEKIKIENPGT 149

BLAST of Moc08g16540 vs. NCBI nr
Match: XP_022143568.1 (uncharacterized protein LOC111013438 [Momordica charantia])

HSP 1 Score: 162.5 bits (410), Expect = 5.8e-36
Identity = 80/136 (58.82%), Postives = 97/136 (71.32%), Query Frame = 0

Query: 61  CSWRIIARSVGRSRVFCISKYVVEHTCSVNVLNDQHRQASSWVIANLIKDGITGTGQTYQ 120
           C WR++A +VG+S +FCISKY+ EHTCSV+VLN  HRQ SSWVIANLIKD +TGT   Y+
Sbjct: 67  CIWRVVAHTVGKSSIFCISKYIAEHTCSVDVLNHDHRQGSSWVIANLIKDKLTGTSCIYR 126

Query: 121 VKHIIHDVRTKFGVHISYDKAHRGKELAYPILRGWPEDSYTHMHAYDEALKIKNPDTHDA 180
            KHI  DVR + GV++SY KA+  +ELAY +LR  PEDSY  +HAYDEALKI+N  T   
Sbjct: 127 TKHIKEDVRKQCGVNLSYLKAYHAQELAYAMLRDQPEDSYADLHAYDEALKIENTGT--- 186

Query: 181 THVDPDVPTVDTDVRG 197
                 V  V TDV G
Sbjct: 187 ------VFQVQTDVFG 193

BLAST of Moc08g16540 vs. NCBI nr
Match: XP_022159086.1 (uncharacterized protein LOC111025530 [Momordica charantia])

HSP 1 Score: 161.8 bits (408), Expect = 9.9e-36
Identity = 70/117 (59.83%), Postives = 92/117 (78.63%), Query Frame = 0

Query: 61  CSWRIIARSVGRSRVFCISKYVVEHTCSVNVLNDQHRQASSWVIANLIKDGITGTGQTYQ 120
           C+WR+ A SVG+S +FC SKYV  HTC+++ +N  H+QASSWV+ANLIKD +  T + Y+
Sbjct: 67  CNWRVAAHSVGKSSIFCTSKYVDAHTCTIDTVNHDHKQASSWVVANLIKDRVARTSRIYK 126

Query: 121 VKHIIHDVRTKFGVHISYDKAHRGKELAYPILRGWPEDSYTHMHAYDEALKIKNPDT 178
           +KHI  DVR +F V+ISYDKAHR +ELAY I+RG  EDSY H+HAY +A+KI+NP T
Sbjct: 127 IKHIKEDVREEFRVNISYDKAHRARELAYAIVRGRSEDSYMHLHAYGKAIKIENPGT 183

BLAST of Moc08g16540 vs. NCBI nr
Match: XP_022154997.1 (uncharacterized protein LOC111022140 [Momordica charantia])

HSP 1 Score: 152.9 bits (385), Expect = 4.6e-33
Identity = 72/143 (50.35%), Postives = 95/143 (66.43%), Query Frame = 0

Query: 37  NPSQESNRLYTSHFQADPTYTLA----ECSWRIIARSVGRSRVFCISKYVVEHTCSVNVL 96
           N +  SNR Y         + +      C+ R+   SVG+S +FCISKYV  HTC ++ +
Sbjct: 126 NAAMRSNREYKVSRSTKSKFVVRCINNTCNLRVATHSVGKSSIFCISKYVDAHTCMIDTV 185

Query: 97  NDQHRQASSWVIANLIKDGITGTGQTYQVKHIIHDVRTKFGVHISYDKAHRGKELAYPIL 156
           N  H+QASS ++ANLIKD + G G+ Y +KHI  DVR +FGV+ SYDKAHR +ELAY I+
Sbjct: 186 NHDHKQASSSIVANLIKDRVAGIGRIYMIKHIKEDVRKEFGVNKSYDKAHRARELAYAIV 245

Query: 157 RGWPEDSYTHMHAYDEALKIKNP 176
           RG PEDSY H+H Y EA+KI+ P
Sbjct: 246 RGRPEDSYMHLHVYGEAIKIEYP 268

BLAST of Moc08g16540 vs. ExPASy TrEMBL
Match: A0A6J1DL08 (uncharacterized protein LOC111022071 OS=Momordica charantia OX=3673 GN=LOC111022071 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 1.4e-40
Identity = 80/145 (55.17%), Postives = 106/145 (73.10%), Query Frame = 0

Query: 37  NPSQESNRLYTSHFQADPTYTLA----ECSWRIIARSVGRSRVFCISKYVVEHTCSVNVL 96
           N +  SNR Y         + +      C+WR+ A SVG+S +FCISKYV  HTC+++ +
Sbjct: 219 NAAMRSNREYKVSRSTKSKFNVRCIDNTCNWRVAAHSVGKSSIFCISKYVDAHTCTIDSV 278

Query: 97  NDQHRQASSWVIANLIKDGITGTGQTYQVKHIIHDVRTKFGVHISYDKAHRGKELAYPIL 156
           N  H+QASSWV+ANLIKDG+ GTG+ Y++KHI  DVR ++GV+ISYDKAHR +ELAY I+
Sbjct: 279 NHDHKQASSWVVANLIKDGVAGTGRIYKIKHIKEDVRKEYGVNISYDKAHRARELAYTIV 338

Query: 157 RGWPEDSYTHMHAYDEALKIKNPDT 178
           RG P+DSY H+HAY EA+KI+NP T
Sbjct: 339 RGRPKDSYMHLHAYGEAIKIENPGT 363

BLAST of Moc08g16540 vs. ExPASy TrEMBL
Match: A0A6J1DNF8 (uncharacterized protein LOC111021631 OS=Momordica charantia OX=3673 GN=LOC111021631 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 9.7e-37
Identity = 72/117 (61.54%), Postives = 93/117 (79.49%), Query Frame = 0

Query: 61  CSWRIIARSVGRSRVFCISKYVVEHTCSVNVLNDQHRQASSWVIANLIKDGITGTGQTYQ 120
           C+W++ A SVG+S +FCISKYV  HT +++ +N  H+QASSWV+ANLIKD + GTG+ Y+
Sbjct: 33  CNWKVAAHSVGKSWIFCISKYVHAHTYTIDTVNHDHKQASSWVVANLIKDRVPGTGRIYK 92

Query: 121 VKHIIHDVRTKFGVHISYDKAHRGKELAYPILRGWPEDSYTHMHAYDEALKIKNPDT 178
           +KHI  DVR +FGV ISYDKAHR +ELAY I+RG  EDSY H+HAY E +KI+NP T
Sbjct: 93  IKHIKEDVRKEFGVTISYDKAHRARELAYAIVRGRQEDSYMHLHAYGEKIKIENPGT 149

BLAST of Moc08g16540 vs. ExPASy TrEMBL
Match: A0A6J1CR12 (uncharacterized protein LOC111013438 OS=Momordica charantia OX=3673 GN=LOC111013438 PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 2.8e-36
Identity = 80/136 (58.82%), Postives = 97/136 (71.32%), Query Frame = 0

Query: 61  CSWRIIARSVGRSRVFCISKYVVEHTCSVNVLNDQHRQASSWVIANLIKDGITGTGQTYQ 120
           C WR++A +VG+S +FCISKY+ EHTCSV+VLN  HRQ SSWVIANLIKD +TGT   Y+
Sbjct: 67  CIWRVVAHTVGKSSIFCISKYIAEHTCSVDVLNHDHRQGSSWVIANLIKDKLTGTSCIYR 126

Query: 121 VKHIIHDVRTKFGVHISYDKAHRGKELAYPILRGWPEDSYTHMHAYDEALKIKNPDTHDA 180
            KHI  DVR + GV++SY KA+  +ELAY +LR  PEDSY  +HAYDEALKI+N  T   
Sbjct: 127 TKHIKEDVRKQCGVNLSYLKAYHAQELAYAMLRDQPEDSYADLHAYDEALKIENTGT--- 186

Query: 181 THVDPDVPTVDTDVRG 197
                 V  V TDV G
Sbjct: 187 ------VFQVQTDVFG 193

BLAST of Moc08g16540 vs. ExPASy TrEMBL
Match: A0A6J1E2V3 (uncharacterized protein LOC111025530 OS=Momordica charantia OX=3673 GN=LOC111025530 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 4.8e-36
Identity = 70/117 (59.83%), Postives = 92/117 (78.63%), Query Frame = 0

Query: 61  CSWRIIARSVGRSRVFCISKYVVEHTCSVNVLNDQHRQASSWVIANLIKDGITGTGQTYQ 120
           C+WR+ A SVG+S +FC SKYV  HTC+++ +N  H+QASSWV+ANLIKD +  T + Y+
Sbjct: 67  CNWRVAAHSVGKSSIFCTSKYVDAHTCTIDTVNHDHKQASSWVVANLIKDRVARTSRIYK 126

Query: 121 VKHIIHDVRTKFGVHISYDKAHRGKELAYPILRGWPEDSYTHMHAYDEALKIKNPDT 178
           +KHI  DVR +F V+ISYDKAHR +ELAY I+RG  EDSY H+HAY +A+KI+NP T
Sbjct: 127 IKHIKEDVREEFRVNISYDKAHRARELAYAIVRGRSEDSYMHLHAYGKAIKIENPGT 183

BLAST of Moc08g16540 vs. ExPASy TrEMBL
Match: A0A6J1DN69 (uncharacterized protein LOC111022140 OS=Momordica charantia OX=3673 GN=LOC111022140 PE=3 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 2.2e-33
Identity = 72/143 (50.35%), Postives = 95/143 (66.43%), Query Frame = 0

Query: 37  NPSQESNRLYTSHFQADPTYTLA----ECSWRIIARSVGRSRVFCISKYVVEHTCSVNVL 96
           N +  SNR Y         + +      C+ R+   SVG+S +FCISKYV  HTC ++ +
Sbjct: 126 NAAMRSNREYKVSRSTKSKFVVRCINNTCNLRVATHSVGKSSIFCISKYVDAHTCMIDTV 185

Query: 97  NDQHRQASSWVIANLIKDGITGTGQTYQVKHIIHDVRTKFGVHISYDKAHRGKELAYPIL 156
           N  H+QASS ++ANLIKD + G G+ Y +KHI  DVR +FGV+ SYDKAHR +ELAY I+
Sbjct: 186 NHDHKQASSSIVANLIKDRVAGIGRIYMIKHIKEDVRKEFGVNKSYDKAHRARELAYAIV 245

Query: 157 RGWPEDSYTHMHAYDEALKIKNP 176
           RG PEDSY H+H Y EA+KI+ P
Sbjct: 246 RGRPEDSYMHLHVYGEAIKIEYP 268

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022154925.13.0e-4055.17uncharacterized protein LOC111022071 [Momordica charantia][more]
XP_022154346.12.0e-3661.54uncharacterized protein LOC111021631 [Momordica charantia][more]
XP_022143568.15.8e-3658.82uncharacterized protein LOC111013438 [Momordica charantia][more]
XP_022159086.19.9e-3659.83uncharacterized protein LOC111025530 [Momordica charantia][more]
XP_022154997.14.6e-3350.35uncharacterized protein LOC111022140 [Momordica charantia][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DL081.4e-4055.17uncharacterized protein LOC111022071 OS=Momordica charantia OX=3673 GN=LOC111022... [more]
A0A6J1DNF89.7e-3761.54uncharacterized protein LOC111021631 OS=Momordica charantia OX=3673 GN=LOC111021... [more]
A0A6J1CR122.8e-3658.82uncharacterized protein LOC111013438 OS=Momordica charantia OX=3673 GN=LOC111013... [more]
A0A6J1E2V34.8e-3659.83uncharacterized protein LOC111025530 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A6J1DN692.2e-3350.35uncharacterized protein LOC111022140 OS=Momordica charantia OX=3673 GN=LOC111022... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 176..205
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 241..265
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 176..198

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc08g16540.1Moc08g16540.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0008270 zinc ion binding