Moc08g15800 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc08g15800
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Locationchr8: 12155732 .. 12156908 (-)
RNA-Seq ExpressionMoc08g15800
SyntenyMoc08g15800
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGATTTCTCGAGCAGTCAAGTTTCGAAGGAATTACGAGGTTCGATGGAGCCAACTTTGGGTATTGGAAAATGCAGATTAAAGATTACTTAACCTGCAAAAAGGTACACAAAGCTTTGAAGGAATGACTAGCTAGAATGAAAGCTGAAGATTGGGAAGATATGGATGAACAGGTAGTTGCAATAATCCGGTTGTGTCTATCAATGAATGTAGCGAGTCTTGTGGCAAATGAGACAACATCGATAGGTATGATGAATGCACTGACGAACAGGTATGAAAAACCATCTGCCAATAATAAGGTATATCTTGTTATAAGATATTTTAAGATTCATATAGATGACAATGCTTCTGTGAATTTTCATATAAATGAAGTCACTAATTTAATCAATCAGTTAGCGTCTCTGAAGTTACATTTAGTGATGAGGTGAATGTTATTTTATTGTTGACTTCTTTGCTTTAAAGTTGGGAAACGATGAAGACGATTGCGTCTAATTAGTTAGGAGATAAGAGTTTAAAATTTACAGAAATTTGTGATGCTGCAATTGCTGAGGAAATTCACAAGAACGAGAGTGGAAAAGAATCCACTTCTGGTTCCGCATCTGGCTCAGCATTGGCTATTCAGAAAGGTAAAGAAAATGTTGATTATGATGAGAGACAACATAGAAATAGCAAGAGGAATGAGAATGGTGAAATCGAATGTTATTACTTCCACAAGAAATGCCACTATAAAAAACATTGTAATAAATTGAAAGAGGATCTGAAAAATTTGGATGCAAATGCAAATGTAGTTGTGCATGATGCTCTTGTTTGTGTTGAGAGTAACATAATGCTAGTGCACCAGTCATCAGAATGGGTAGTAGACAGTGCAGATTCAGTACACATCTCTTTAGATAGAAGATTGTCACATCTTTCATTGCAGGCAACTATGGCATGGTAAGGATGGGAAATGGCAGGCTCTCCAAGACTAGAGGAATTGGAGATATTAGTCTGAAGACCGATAGTGGGACTGAGTTGGTTCTGCGAGATGTCAGGTACATACTCAGTATCAGATTGAATTTAATATCTGTAAAGAAGTTGGACGATGATGGTTATGGAAGAGAGTTTGGTGGAAACATGTGGAAACTCACTAGAGGATCCGAGTTGGTGGTTGTTGGCCACATGACATCTACAGTGTAA

mRNA sequence

ATGAGATTTCTCGAGCAGTCAAGTTTCGAAGGAATTACGAGGTTCGATGGAGCCAACTTTGGGTATTGGAAAATGCAGATTAAAGATTACTTAACCTGCAAAAAGGTAGTTGCAATAATCCGGTTGTGTCTATCAATGAATGTAGCGAGTCTTGTGGCAAATGAGACAACATCGATAGAAATTTGTGATGCTGCAATTGCTGAGGAAATTCACAAGAACGAGAGTGGAAAAGAATCCACTTCTGGTTCCGCATCTGGCTCAGCATTGGCTATTCAGAAAGGTAAAGAAAATGTTGATTATGATGAGAGACAACATAGAAATAGCAAGAGGAATGAGAATGGTGAAATCGAATGTTATTACTTCCACAAGAAATGCCACTATAAAAAACATTGTAATAAATTGAAAGAGGATCTGAAAAATTTGGATGCAAATGCAAATGTAGTTGTGCATGATGCTCTTGTTTGTGTTGAGAGCAACTATGGCATGGTAAGGATGGGAAATGGCAGGCTCTCCAAGACTAGAGGAATTGGAGATATTAGTCTGAAGACCGATAGTGGGACTGAGTTGGTTCTGCGAGATGTCAGGTACATACTCAGTATCAGATTGAATTTAATATCTGTAAAGAAGTTGGACGATGATGGTTATGGAAGAGAGTTTGGTGGAAACATGTGGAAACTCACTAGAGGATCCGAGTTGGTGGTTGTTGGCCACATGACATCTACAGTGTAA

Coding sequence (CDS)

ATGAGATTTCTCGAGCAGTCAAGTTTCGAAGGAATTACGAGGTTCGATGGAGCCAACTTTGGGTATTGGAAAATGCAGATTAAAGATTACTTAACCTGCAAAAAGGTAGTTGCAATAATCCGGTTGTGTCTATCAATGAATGTAGCGAGTCTTGTGGCAAATGAGACAACATCGATAGAAATTTGTGATGCTGCAATTGCTGAGGAAATTCACAAGAACGAGAGTGGAAAAGAATCCACTTCTGGTTCCGCATCTGGCTCAGCATTGGCTATTCAGAAAGGTAAAGAAAATGTTGATTATGATGAGAGACAACATAGAAATAGCAAGAGGAATGAGAATGGTGAAATCGAATGTTATTACTTCCACAAGAAATGCCACTATAAAAAACATTGTAATAAATTGAAAGAGGATCTGAAAAATTTGGATGCAAATGCAAATGTAGTTGTGCATGATGCTCTTGTTTGTGTTGAGAGCAACTATGGCATGGTAAGGATGGGAAATGGCAGGCTCTCCAAGACTAGAGGAATTGGAGATATTAGTCTGAAGACCGATAGTGGGACTGAGTTGGTTCTGCGAGATGTCAGGTACATACTCAGTATCAGATTGAATTTAATATCTGTAAAGAAGTTGGACGATGATGGTTATGGAAGAGAGTTTGGTGGAAACATGTGGAAACTCACTAGAGGATCCGAGTTGGTGGTTGTTGGCCACATGACATCTACAGTGTAA

Protein sequence

MRFLEQSSFEGITRFDGANFGYWKMQIKDYLTCKKVVAIIRLCLSMNVASLVANETTSIEICDAAIAEEIHKNESGKESTSGSASGSALAIQKGKENVDYDERQHRNSKRNENGEIECYYFHKKCHYKKHCNKLKEDLKNLDANANVVVHDALVCVESNYGMVRMGNGRLSKTRGIGDISLKTDSGTELVLRDVRYILSIRLNLISVKKLDDDGYGREFGGNMWKLTRGSELVVVGHMTSTV
Homology
BLAST of Moc08g15800 vs. NCBI nr
Match: RVW30183.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 112.1 bits (279), Expect = 6.9e-21
Identity = 92/319 (28.84%), Postives = 140/319 (43.89%), Query Frame = 0

Query: 5   EQSSFEGITRFDGANFGYWKMQIKDYLTCKK------------------------VVAII 64
           E     GI +FDG +F YW+MQI+DYL  +K                        V+ +I
Sbjct: 4   EAGKASGIEKFDGTDFAYWRMQIEDYLYGRKLHLPLLGTKPESMKAEEWALLDRQVLGVI 63

Query: 65  RLCLSMNVASLVANETTSI--------------------EICDAAIAEEIHKNESGKEST 124
           RL LS +VA  V  E T+                     +I D  +AEEI + ++G+ S 
Sbjct: 64  RLTLSRSVAHNVVKEKTTADLMKALSVSNSTGKEKLKYNDIRDLILAEEIRRRDAGETSG 123

Query: 125 SGSASGSALAIQKGKENVDYDERQHRNSKRNEN-----GEIECYYFHKKCHYKKHCNKLK 184
           SGSA       +    N +      RNS RN +      +++C+   K  H+K+ C   K
Sbjct: 124 SGSALNLETRGRGNNRNSNQGRSNSRNSNRNRSKSRSGQQVQCWNCGKTGHFKRQCKSPK 183

Query: 185 EDLKNLDANANVV---VHDALVC-----------------------------VESNYGMV 243
           +  KN D +AN V   V DAL+                              V  ++G V
Sbjct: 184 K--KNEDDSANAVTEEVQDALLLAVDSPLDDWVLDSGASFHTTSHREIIQNYVAGDFGKV 243

BLAST of Moc08g15800 vs. NCBI nr
Match: VVB10973.1 (unnamed protein product [Arabis nemorensis])

HSP 1 Score: 109.0 bits (271), Expect = 5.8e-20
Identity = 77/218 (35.32%), Postives = 118/218 (54.13%), Query Frame = 0

Query: 55  ETTSIEICDAA----IAEEIHK----NESGKESTSGSASGSALAIQKGKENVDYDE-RQH 114
           E  ++ +C++A    I+ ++ K    NE  +  +  S+S S + + K +    Y E R +
Sbjct: 133 EVFTMSLCNSASBGVISMDLVKNSVLNEEVRRKSXPSSSRSDVMVSKSRGRSSYREPRNN 192

Query: 115 RN---SKRNENGEIECYYFHKKCHYKKHCNKLKEDLK-------NLDANANVVVHDALVC 174
           +N   SK N+   +EC+Y +KK H KK+C KLK+D+K         D + + VV      
Sbjct: 193 KNRSRSKSNKFANMECHYCNKKGHMKKNCWKLKKDIKLGKNQEDGEDRDTSWVVDSGATT 252

Query: 175 ------------VESNYGMVRMGNGRLSKTRGIGDISLKTDSGTELVLRDVRYILSIRLN 234
                         S+YG V+MGN  ++K  GIGDI L+T  GT ++L+ V+++  IRLN
Sbjct: 253 HATSQRDLFTTYTPSSYGSVKMGNDAVAKVAGIGDICLETSIGTRVLLKGVKHVPBIRLN 312

Query: 235 LISVKKLDDDGYGREFGGNMWKLTRGSELVVVGHMTST 242
           LI   KLDD+G+   FGG  WKLTRGS ++  G   S+
Sbjct: 313 LIXTGKLDDEGFYSLFGGGKWKLTRGSXVMARGDKHSS 350

BLAST of Moc08g15800 vs. NCBI nr
Match: RVW84195.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 108.2 bits (269), Expect = 9.9e-20
Identity = 73/220 (33.18%), Postives = 109/220 (49.55%), Query Frame = 0

Query: 73  NESGKESTSGSASGSALAIQ-------KGKENVDYDERQHRNSKRNENGEIECYYFHKKC 132
           NE  +  +SGS+   AL I+       K K + + D+ + R+S  ++  ++ECYY HKK 
Sbjct: 160 NEETRRKSSGSSHSEALVIENRGRGRSKSKASHNRDKSRGRSSSISKK-DVECYYCHKKG 219

Query: 133 HYKKHCNKLKEDLKNLDANANVVVHDALVCV----------------------------- 192
           H K+ C KLK   +N + N+    +D  V                               
Sbjct: 220 HMKRECRKLKFKEQNKEKNSEKKQNDTAVVTDGELMIIRDDVSVNLIGQETDWVIDSGAS 279

Query: 193 --------------ESNYGMVRMGNGRLSKTRGIGDISLKTDSGTELVLRDVRYILSIRL 243
                         + ++G VRMGN  +SK  G+GDI L+T++G +L+LRDVR++  IRL
Sbjct: 280 FHVTSRADFFTSYSQGDFGNVRMGNEDVSKIVGMGDICLETNTGCKLLLRDVRHVPDIRL 339

BLAST of Moc08g15800 vs. NCBI nr
Match: RVW14266.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 108.2 bits (269), Expect = 9.9e-20
Identity = 73/220 (33.18%), Postives = 109/220 (49.55%), Query Frame = 0

Query: 73  NESGKESTSGSASGSALAIQ-------KGKENVDYDERQHRNSKRNENGEIECYYFHKKC 132
           NE  +  +SGS+   AL I+       K K + + D+ + R+S  ++  ++ECYY HKK 
Sbjct: 396 NEETRRKSSGSSHSEALVIENRGRGRSKSKASHNRDKSRGRSSSISKK-DVECYYCHKKG 455

Query: 133 HYKKHCNKLKEDLKNLDANANVVVHDALVCV----------------------------- 192
           H K+ C KLK   +N + N+    +D  V                               
Sbjct: 456 HMKRECRKLKFKEQNKEKNSEKKQNDTAVVTDGELMIIRDDVSVNLIGQETDWVIDSGAS 515

Query: 193 --------------ESNYGMVRMGNGRLSKTRGIGDISLKTDSGTELVLRDVRYILSIRL 243
                         + ++G VRMGN  +SK  G+GDI L+T++G +L+LRDVR++  IRL
Sbjct: 516 FHVTSRADFFTSYSQGDFGNVRMGNEDVSKIVGMGDICLETNTGCKLLLRDVRHVPDIRL 575

BLAST of Moc08g15800 vs. NCBI nr
Match: RVW42505.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 108.2 bits (269), Expect = 9.9e-20
Identity = 73/220 (33.18%), Postives = 109/220 (49.55%), Query Frame = 0

Query: 73  NESGKESTSGSASGSALAIQ-------KGKENVDYDERQHRNSKRNENGEIECYYFHKKC 132
           NE  +  +SGS+   AL I+       K K + + D+ + R+S  ++  ++ECYY HKK 
Sbjct: 49  NEETRRKSSGSSHSEALVIENRGRGRSKSKASHNRDKSRGRSSSISKK-DVECYYCHKKG 108

Query: 133 HYKKHCNKLKEDLKNLDANANVVVHDALVCV----------------------------- 192
           H K+ C KLK   +N + N+    +D  V                               
Sbjct: 109 HMKRECRKLKFKEQNKEKNSEKKQNDTAVVTDGELMIIRDDVSVNLIGQETDWVIDSGAS 168

Query: 193 --------------ESNYGMVRMGNGRLSKTRGIGDISLKTDSGTELVLRDVRYILSIRL 243
                         + ++G VRMGN  +SK  G+GDI L+T++G +L+LRDVR++  IRL
Sbjct: 169 FHVTSRADFFTSYSQGDFGNVRMGNEDVSKIVGMGDICLETNTGCKLLLRDVRHVPDIRL 228

BLAST of Moc08g15800 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 8.4e-14
Identity = 70/244 (28.69%), Postives = 109/244 (44.67%), Query Frame = 0

Query: 47  NVASLVANETTSIEICDAAIAEEIHKNESGKESTSGSA---SGSALAIQKGKENVDYDER 106
           N+A+ + +  T+IE+ D   A  +++    K    G A    G   + Q+   N      
Sbjct: 158 NLATTILHGKTTIELKDVTSALLLNEKMRKKPENQGQALITEGRGRSYQRSSNNYGRSGA 217

Query: 107 QHRNSKRNENGEIECYYFHKKCHYKKHCNKLKE------DLKNLD-------ANANVVV- 166
           + ++  R+++    CY  ++  H+K+ C   ++        KN D        N NVV+ 
Sbjct: 218 RGKSKNRSKSRVRNCYNCNQPGHFKRDCPNPRKGKGETSGQKNDDNTAAMVQNNDNVVLF 277

Query: 167 ------------------------HDA-----LVC--VESNYGMVRMGNGRLSKTRGIGD 226
                                   H A     L C  V  ++G V+MGN   SK  GIGD
Sbjct: 278 INEEEECMHLSGPESEWVVDTAASHHATPVRDLFCRYVAGDFGTVKMGNTSYSKIAGIGD 337

Query: 227 ISLKTDSGTELVLRDVRYILSIRLNLISVKKLDDDGYGREFGGNMWKLTRGSELVVVGHM 243
           I +KT+ G  LVL+DVR++  +R+NLIS   LD DGY   F    W+LT+GS ++  G  
Sbjct: 338 ICIKTNVGCTLVLKDVRHVPDLRMNLISGIALDRDGYESYFANQKWRLTKGSLVIAKGVA 397

BLAST of Moc08g15800 vs. ExPASy TrEMBL
Match: A0A438D407 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_2203 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 3.3e-21
Identity = 92/319 (28.84%), Postives = 140/319 (43.89%), Query Frame = 0

Query: 5   EQSSFEGITRFDGANFGYWKMQIKDYLTCKK------------------------VVAII 64
           E     GI +FDG +F YW+MQI+DYL  +K                        V+ +I
Sbjct: 4   EAGKASGIEKFDGTDFAYWRMQIEDYLYGRKLHLPLLGTKPESMKAEEWALLDRQVLGVI 63

Query: 65  RLCLSMNVASLVANETTSI--------------------EICDAAIAEEIHKNESGKEST 124
           RL LS +VA  V  E T+                     +I D  +AEEI + ++G+ S 
Sbjct: 64  RLTLSRSVAHNVVKEKTTADLMKALSVSNSTGKEKLKYNDIRDLILAEEIRRRDAGETSG 123

Query: 125 SGSASGSALAIQKGKENVDYDERQHRNSKRNEN-----GEIECYYFHKKCHYKKHCNKLK 184
           SGSA       +    N +      RNS RN +      +++C+   K  H+K+ C   K
Sbjct: 124 SGSALNLETRGRGNNRNSNQGRSNSRNSNRNRSKSRSGQQVQCWNCGKTGHFKRQCKSPK 183

Query: 185 EDLKNLDANANVV---VHDALVC-----------------------------VESNYGMV 243
           +  KN D +AN V   V DAL+                              V  ++G V
Sbjct: 184 K--KNEDDSANAVTEEVQDALLLAVDSPLDDWVLDSGASFHTTSHREIIQNYVAGDFGKV 243

BLAST of Moc08g15800 vs. ExPASy TrEMBL
Match: A0A565CBH1 (CCHC-type domain-containing protein OS=Arabis nemorensis OX=586526 GN=ANE_LOCUS21417 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 2.8e-20
Identity = 77/218 (35.32%), Postives = 116/218 (53.21%), Query Frame = 0

Query: 55  ETTSIEIC----DAAIAEEIHK----NESGKESTSGSASGSALAIQKGKENVDYDE-RQH 114
           E  ++ +C    D  I+ ++ K    NE  +  +  S+S S + + K +    Y E R +
Sbjct: 133 EVFTMSLCNSASDGVISMDLVKNSVLNEEVRRKSXPSSSRSDVMVSKSRGRSSYREPRNN 192

Query: 115 RN---SKRNENGEIECYYFHKKCHYKKHCNKLKEDLK-------NLDANANVVVHDALVC 174
           +N   SK N+   +EC+Y +KK H KK+C KLK+D+K         D + + VV      
Sbjct: 193 KNRSRSKSNKFANMECHYCNKKGHMKKNCWKLKKDIKLGKNQEDGEDRDTSWVVDSGATT 252

Query: 175 ------------VESNYGMVRMGNGRLSKTRGIGDISLKTDSGTELVLRDVRYILSIRLN 234
                         S+YG V+MGN  ++K  GIGDI L+T  GT ++L+ V+++  IRLN
Sbjct: 253 HATSQRDLFTTYTPSSYGSVKMGNDAVAKVAGIGDICLETSIGTRVLLKGVKHVPDIRLN 312

Query: 235 LISVKKLDDDGYGREFGGNMWKLTRGSELVVVGHMTST 242
           LI   KLDD+G+   FGG  WKLTRGS ++  G   S+
Sbjct: 313 LIXTGKLDDEGFYSLFGGGKWKLTRGSXVMARGDKHSS 350

BLAST of Moc08g15800 vs. ExPASy TrEMBL
Match: A0A438BTH6 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_4171 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 4.8e-20
Identity = 73/220 (33.18%), Postives = 109/220 (49.55%), Query Frame = 0

Query: 73  NESGKESTSGSASGSALAIQ-------KGKENVDYDERQHRNSKRNENGEIECYYFHKKC 132
           NE  +  +SGS+   AL I+       K K + + D+ + R+S  ++  ++ECYY HKK 
Sbjct: 396 NEETRRKSSGSSHSEALVIENRGRGRSKSKASHNRDKSRGRSSSISKK-DVECYYCHKKG 455

Query: 133 HYKKHCNKLKEDLKNLDANANVVVHDALVCV----------------------------- 192
           H K+ C KLK   +N + N+    +D  V                               
Sbjct: 456 HMKRECRKLKFKEQNKEKNSEKKQNDTAVVTDGELMIIRDDVSVNLIGQETDWVIDSGAS 515

Query: 193 --------------ESNYGMVRMGNGRLSKTRGIGDISLKTDSGTELVLRDVRYILSIRL 243
                         + ++G VRMGN  +SK  G+GDI L+T++G +L+LRDVR++  IRL
Sbjct: 516 FHVTSRADFFTSYSQGDFGNVRMGNEDVSKIVGMGDICLETNTGCKLLLRDVRHVPDIRL 575

BLAST of Moc08g15800 vs. ExPASy TrEMBL
Match: A0A438HI91 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_1199 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 4.8e-20
Identity = 73/220 (33.18%), Postives = 109/220 (49.55%), Query Frame = 0

Query: 73  NESGKESTSGSASGSALAIQ-------KGKENVDYDERQHRNSKRNENGEIECYYFHKKC 132
           NE  +  +SGS+   AL I+       K K + + D+ + R+S  ++  ++ECYY HKK 
Sbjct: 160 NEETRRKSSGSSHSEALVIENRGRGRSKSKASHNRDKSRGRSSSISKK-DVECYYCHKKG 219

Query: 133 HYKKHCNKLKEDLKNLDANANVVVHDALVCV----------------------------- 192
           H K+ C KLK   +N + N+    +D  V                               
Sbjct: 220 HMKRECRKLKFKEQNKEKNSEKKQNDTAVVTDGELMIIRDDVSVNLIGQETDWVIDSGAS 279

Query: 193 --------------ESNYGMVRMGNGRLSKTRGIGDISLKTDSGTELVLRDVRYILSIRL 243
                         + ++G VRMGN  +SK  G+GDI L+T++G +L+LRDVR++  IRL
Sbjct: 280 FHVTSRADFFTSYSQGDFGNVRMGNEDVSKIVGMGDICLETNTGCKLLLRDVRHVPDIRL 339

BLAST of Moc08g15800 vs. ExPASy TrEMBL
Match: A0A438IBT7 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_788 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 4.8e-20
Identity = 73/220 (33.18%), Postives = 109/220 (49.55%), Query Frame = 0

Query: 73  NESGKESTSGSASGSALAIQ-------KGKENVDYDERQHRNSKRNENGEIECYYFHKKC 132
           NE  +  +SGS+   AL I+       K K + + D+ + R+S  ++  ++ECYY HKK 
Sbjct: 130 NEETRRKSSGSSHSEALVIENRERGKSKSKASHNRDKSRGRSSSISKK-DVECYYCHKKG 189

Query: 133 HYKKHCNKLKEDLKNLDANANVVVHDALVCV----------------------------- 192
           H K+ C KLK   +N + N+    +D  V                               
Sbjct: 190 HMKRECRKLKFKEQNKEKNSEKKQNDTAVVTDGELMIIRDDVSVNLIGQETDWVIDSGAS 249

Query: 193 --------------ESNYGMVRMGNGRLSKTRGIGDISLKTDSGTELVLRDVRYILSIRL 243
                         + ++G VRMGN  +SK  G+GDI L+T++G +L+LRDVR++  IRL
Sbjct: 250 FHVTSRADFFTSYSQGDFGNVRMGNEDVSKIFGMGDICLETNTGCKLLLRDVRHVPDIRL 309

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
RVW30183.16.9e-2128.84Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera][more]
VVB10973.15.8e-2035.32unnamed protein product [Arabis nemorensis][more]
RVW84195.19.9e-2033.18Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera][more]
RVW14266.19.9e-2033.18Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera][more]
RVW42505.19.9e-2033.18Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera][more]
Match NameE-valueIdentityDescription
P109788.4e-1428.69Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
Match NameE-valueIdentityDescription
A0A438D4073.3e-2128.84Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX... [more]
A0A565CBH12.8e-2035.32CCHC-type domain-containing protein OS=Arabis nemorensis OX=586526 GN=ANE_LOCUS2... [more]
A0A438BTH64.8e-2033.18Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX... [more]
A0A438HI914.8e-2033.18Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX... [more]
A0A438IBT74.8e-2033.18Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc08g15800.1Moc08g15800.1mRNA