Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGACAAGGATTGGAATGAGATGGATGAGCAGGCCGTTGCGAACATCAGAATGTCGTTGTCAATGAATGTTTGTAGTCTGGTGACGAAAGAGACTACAGCGAAAGATTTGTTGAAGGTCTTGCAAGACAGGTATGAAAAACCTTCTGCCAATACAAAGACACTTCCATGGACGAGGTATTTTAATATCCACATGGAGGAAACCTCAGTGAATTCCCACATTAATGAACTCACTGATATCTTGAACAAGTTAGAAGGGATGGGTGTCAAGATTGACGAGGACGTGAAAGCTATGAGGTTTTTGACGTCTTTGCCTGACAGTTGGGAGACGATGAAGACCGTAGTGTCGAATTCGCTAGGGGAAAATAGCTTGAAATTTACAGCTACTTGTGATGCTGCCATATCTGAGGAAGCCCAAAGAAAATTAGGGAAAATGTTTGCATCTACTTCAGGGGCAGAAAATGAGGTTGAATCAGCTTTGGTAGCTGAGAACAAAGGGAAGGCAAAGATGAGTTACAATGGGAAGCAGCAGCGGAGATATAGGGGTAGTGGGTGTTCCAGTGGAGAAGTAGAATGTTATTACTGCCACAAGAAGGGACACGTGAAACGTTTCTATAGAAAGTTCAAAGAAGATTGTGAGAAGAGGAACAATTCTACAAATGTTGTAACAGAAGAAGAACGGATTGACGAGTTTCTAGCTTGTGCTCAGAGGAACATATCTGTAGACTAA
mRNA sequence
ATGGCAGACAAGGATTGGAATGAGATGGATGAGCAGGCCGTTGCGAACATCAGAATGTCGTTGTCAATGAATGTTTGTAGTCTGGTGACGAAAGAGACTACAGCGAAAGATTTGTTGAAGGTCTTGCAAGACAGGTATGAAAAACCTTCTGCCAATACAAAGACACTTCCATGGACGAGGTATTTTAATATCCACATGGAGGAAACCTCAGTGAATTCCCACATTAATGAACTCACTGATATCTTGAACAAGTTAGAAGGGATGGGTGTCAAGATTGACGAGGACGTGAAAGCTATGAGGTTTTTGACGTCTTTGCCTGACAGTTGGGAGACGATGAAGACCGTAGTGTCGAATTCGCTAGGGGAAAATAGCTTGAAATTTACAGCTACTTGTGATGCTGCCATATCTGAGGAAGCCCAAAGAAAATTAGGGAAAATGTTTGCATCTACTTCAGGGGCAGAAAATGAGGTTGAATCAGCTTTGGTAGCTGAGAACAAAGGGAAGGCAAAGATGAGTTACAATGGGAAGCAGCAGCGGAGATATAGGGGTAGTGGGTGTTCCAGTGGAGAAGTAGAATGTTATTACTGCCACAAGAAGGGACACGTGAAACGTTTCTATAGAAAGTTCAAAGAAGATTGTGAGAAGAGGAACAATTCTACAAATGTTGTAACAGAAGAAGAACGGATTGACGAGTTTCTAGCTTGTGCTCAGAGGAACATATCTGTAGACTAA
Coding sequence (CDS)
ATGGCAGACAAGGATTGGAATGAGATGGATGAGCAGGCCGTTGCGAACATCAGAATGTCGTTGTCAATGAATGTTTGTAGTCTGGTGACGAAAGAGACTACAGCGAAAGATTTGTTGAAGGTCTTGCAAGACAGGTATGAAAAACCTTCTGCCAATACAAAGACACTTCCATGGACGAGGTATTTTAATATCCACATGGAGGAAACCTCAGTGAATTCCCACATTAATGAACTCACTGATATCTTGAACAAGTTAGAAGGGATGGGTGTCAAGATTGACGAGGACGTGAAAGCTATGAGGTTTTTGACGTCTTTGCCTGACAGTTGGGAGACGATGAAGACCGTAGTGTCGAATTCGCTAGGGGAAAATAGCTTGAAATTTACAGCTACTTGTGATGCTGCCATATCTGAGGAAGCCCAAAGAAAATTAGGGAAAATGTTTGCATCTACTTCAGGGGCAGAAAATGAGGTTGAATCAGCTTTGGTAGCTGAGAACAAAGGGAAGGCAAAGATGAGTTACAATGGGAAGCAGCAGCGGAGATATAGGGGTAGTGGGTGTTCCAGTGGAGAAGTAGAATGTTATTACTGCCACAAGAAGGGACACGTGAAACGTTTCTATAGAAAGTTCAAAGAAGATTGTGAGAAGAGGAACAATTCTACAAATGTTGTAACAGAAGAAGAACGGATTGACGAGTTTCTAGCTTGTGCTCAGAGGAACATATCTGTAGACTAA
Protein sequence
MADKDWNEMDEQAVANIRMSLSMNVCSLVTKETTAKDLLKVLQDRYEKPSANTKTLPWTRYFNIHMEETSVNSHINELTDILNKLEGMGVKIDEDVKAMRFLTSLPDSWETMKTVVSNSLGENSLKFTATCDAAISEEAQRKLGKMFASTSGAENEVESALVAENKGKAKMSYNGKQQRRYRGSGCSSGEVECYYCHKKGHVKRFYRKFKEDCEKRNNSTNVVTEEERIDEFLACAQRNISVD
Homology
BLAST of Moc08g14820 vs. NCBI nr
Match:
KAG7584790.1 (Zinc finger CCHC-type superfamily [Arabidopsis thaliana x Arabidopsis arenosa])
HSP 1 Score: 135.6 bits (340), Expect = 5.8e-28
Identity = 89/238 (37.39%), Postives = 127/238 (53.36%), Query Frame = 0
Query: 1 MADKDWNEMDEQAVANIRMSLSMNVCSLVTKETTAKDLLKVLQDRYEKPSANTKTLPWTR 60
MA ++W+ +D Q + IR++LS NV V KE T + L+KVL D YEKPSAN K +
Sbjct: 46 MAQEEWDLLDRQVLGVIRLTLSKNVAHNVAKEKTTEGLMKVLSDMYEKPSANNKVFLMKK 105
Query: 61 YFNIHMEETS-VNSHINELTDILNKLEGMGVKIDEDVKAMRFLTSLPDSWETMKTVVSNS 120
F++ MEE V +H+NE I+N+L + ++ D++V+A+ L SLP+SWE M+ VSNS
Sbjct: 106 LFHLKMEEGGPVATHVNEFNTIVNQLSSVEIEFDDEVRALILLASLPNSWEPMRAAVSNS 165
Query: 121 LGENSLKFTATCDAAISEEAQRKLGKMFASTSGAENEVESALVAENKGKAKMSYN----G 180
+G LKF D + EE +R E + SA EN+G+ + N
Sbjct: 166 VGNQKLKFVDVRDRILGEEVRR--------IDTGETSMSSAFNVENRGRDQNRRNQNRGR 225
Query: 181 KQQRRYRGSGCSSGEVECYYCHKKGHVKRFYRKFKEDC----EKRNN---STNVVTEE 227
+ R +G S VEC+ C K GH FK +C +K NN N VT+E
Sbjct: 226 SKSRNGKGQSKSRKPVECWNCGKTGH-------FKSNCWAPPKKENNKGGGANAVTDE 268
BLAST of Moc08g14820 vs. NCBI nr
Match:
KAG7561662.1 (Zinc finger CCHC-type superfamily [Arabidopsis thaliana x Arabidopsis arenosa])
HSP 1 Score: 134.4 bits (337), Expect = 1.3e-27
Identity = 88/238 (36.97%), Postives = 126/238 (52.94%), Query Frame = 0
Query: 1 MADKDWNEMDEQAVANIRMSLSMNVCSLVTKETTAKDLLKVLQDRYEKPSANTKTLPWTR 60
MA ++W+ +D Q + IR++LS NV V KE T + L+KVL D YEKPSAN K +
Sbjct: 46 MAQEEWDLLDRQVLGVIRLTLSKNVAHNVAKEKTTEGLMKVLSDMYEKPSANNKVFLMKK 105
Query: 61 YFNIHMEETS-VNSHINELTDILNKLEGMGVKIDEDVKAMRFLTSLPDSWETMKTVVSNS 120
F++ MEE V +H+NE I+N+L + ++ D++V+A+ + SLP+SWE M+ VSNS
Sbjct: 106 LFHLKMEEGGPVATHVNEFNTIVNQLSSVEIEFDDEVRALILIASLPNSWEPMRAAVSNS 165
Query: 121 LGENSLKFTATCDAAISEEAQRKLGKMFASTSGAENEVESALVAENKGKAKMSYN----G 180
+G LKF D + EE +R E SA EN+G+ + N
Sbjct: 166 VGNQKLKFVDVRDRILGEEVRR--------IDTGETSTSSAFNVENRGRDQNRRNQNRGR 225
Query: 181 KQQRRYRGSGCSSGEVECYYCHKKGHVKRFYRKFKEDC----EKRNN---STNVVTEE 227
+ R +G S VEC+ C K GH FK +C +K NN N VT+E
Sbjct: 226 SKSRNGKGQSKSRKPVECWNCGKTGH-------FKSNCWAPPKKENNKGGGANAVTDE 268
BLAST of Moc08g14820 vs. NCBI nr
Match:
RVW25839.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])
HSP 1 Score: 133.7 bits (335), Expect = 2.2e-27
Identity = 85/228 (37.28%), Postives = 127/228 (55.70%), Query Frame = 0
Query: 1 MADKDWNEMDEQAVANIRMSLSMNVCSLVTKETTAKDLLKVLQDRYEKPSANTKTLPWTR 60
M ++W +D Q + IR++LS +V V KE T DL+K L YEKPSAN K +
Sbjct: 47 MKAEEWALLDRQVLGVIRLTLSRSVAHNVVKEKTTADLMKALSGMYEKPSANNKVHLMKK 106
Query: 61 YFNIHM-EETSVNSHINELTDILNKLEGMGVKIDEDVKAMRFLTSLPDSWETMKTVVSNS 120
FN+ M E SV H+NE I N+L + + D++++A+ L SLP+SWE M+ VSNS
Sbjct: 107 LFNLKMAENASVAQHLNEFNTITNQLSSVEIDFDDEIRALIVLASLPNSWEAMRMAVSNS 166
Query: 121 LGENSLKFTATCDAAISEEAQRK-LGKMFASTSGAENEVESALVAENKGKAKMSYNGKQQ 180
+G+ LK+ D ++EE +R+ G+ S SG+ +E+ NK + N +
Sbjct: 167 IGKEKLKYNDIRDLILAEEIRRRDAGE--TSGSGSALNLETRGRGNNKNSNQGRSNSRNS 226
Query: 181 RRYRGSGCSSGEVECYYCHKKGHVKRFYRKFKEDCEKRNNSTNVVTEE 227
R R SS +V+C+ C K GH KR + K+ + ++S N VTEE
Sbjct: 227 NRNRSKSRSSQQVQCWNCGKTGHFKRQCKSPKK--KNEDDSANAVTEE 270
BLAST of Moc08g14820 vs. NCBI nr
Match:
KAE8691424.1 (Callose synthase 12 [Hibiscus syriacus])
HSP 1 Score: 132.9 bits (333), Expect = 3.8e-27
Identity = 87/229 (37.99%), Postives = 122/229 (53.28%), Query Frame = 0
Query: 1 MADKDWNEMDEQAVANIRMSLSMNVCSLVTKETTAKDLLKVLQDRYEKPSANTKTLPWTR 60
M D+DW +D QA+ IR++LS NV + KE T L+ L YEKPSA+ K R
Sbjct: 46 MKDEDWALLDRQALGVIRLTLSRNVAFNIAKEKTTAGLMAALSSMYEKPSASNKVHLMRR 105
Query: 61 YFNIHMEE-TSVNSHINELTDILNKLEGMGVKIDEDVKAMRFLTSLPDSWETMKTVVSNS 120
FN+ M E SV H+NEL I +L + ++ D++V+A+ L+SLPDSW T VS+S
Sbjct: 106 LFNLRMTEGASVAQHLNELNTITTQLSSVEIEFDDEVRALILLSSLPDSWNATVTAVSSS 165
Query: 121 LGENSLKFTATCDAAISEEAQRKLGKMFASTSGAENEVESALVAENKGKA--KMSYNGKQ 180
G + LKF D +SEE +R+ E SAL E++G+ + S G+
Sbjct: 166 SGNSKLKFDDVRDLVLSEEIRRR--------ESGEASTSSALHTESRGRTSERNSNRGRS 225
Query: 181 QRRYRGSGCSSGEVECYYCHKKGHVKRFYRKFKEDCEKRNNSTNVVTEE 227
+ R S + CY C KKGH KR R K+D + ++ VTEE
Sbjct: 226 KSRREKSRTGKKDFTCYNCGKKGHFKRDCRALKKDTGAQESAN--VTEE 264
BLAST of Moc08g14820 vs. NCBI nr
Match:
KAG7593230.1 (Pentatricopeptide repeat [Arabidopsis thaliana x Arabidopsis arenosa])
HSP 1 Score: 132.9 bits (333), Expect = 3.8e-27
Identity = 80/208 (38.46%), Postives = 114/208 (54.81%), Query Frame = 0
Query: 1 MADKDWNEMDEQAVANIRMSLSMNVCSLVTKETTAKDLLKVLQDRYEKPSANTKTLPWTR 60
MA ++W+ +D Q + IR++LS NV V KE T + L+KVL D YEKPSAN K +
Sbjct: 46 MAQEEWDLLDRQVLGVIRLTLSKNVAHNVAKEKTTEGLMKVLSDMYEKPSANNKVFLMKK 105
Query: 61 YFNIHMEETS-VNSHINELTDILNKLEGMGVKIDEDVKAMRFLTSLPDSWETMKTVVSNS 120
F++ MEE V +H+NE I+N+L + ++ D++V+A+ L SLP+SWE M+ VSNS
Sbjct: 106 LFHLKMEEGGPVATHVNEFNTIVNQLSSVEIEFDDEVRALILLASLPNSWEPMRAAVSNS 165
Query: 121 LGENSLKFTATCDAAISEEAQRKLGKMFASTSGAENEVESALVAENKGKAKMSYN----G 180
+G LKF D + EE +R E SA EN+G+ + N
Sbjct: 166 VGNQKLKFVDVRDRILGEEVRR--------IDTGETSTSSAFNVENRGRDQNRRNQNRGR 225
Query: 181 KQQRRYRGSGCSSGEVECYYCHKKGHVK 204
+ R +G S VEC+ C K GH K
Sbjct: 226 SKSRNGKGQSKSRKPVECWNCGKTGHFK 245
BLAST of Moc08g14820 vs. ExPASy Swiss-Prot
Match:
P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)
HSP 1 Score: 83.6 bits (205), Expect = 3.4e-15
Identity = 69/247 (27.94%), Postives = 119/247 (48.18%), Query Frame = 0
Query: 1 MADKDWNEMDEQAVANIRMSLSMNVCSLVTKETTAKDLLKVLQDRYEKPSANTKTLPWTR 60
M +DW ++DE+A + IR+ LS +V + + E TA+ + L+ Y + K +
Sbjct: 47 MKAEDWADLDERAASAIRLHLSDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQ 106
Query: 61 YFNIHMEE-TSVNSHINELTDILNKLEGMGVKIDEDVKAMRFLTSLPDSWETMKTVVSNS 120
+ +HM E T+ SH+N ++ +L +GVKI+E+ KA+ L SLP S++ + T + +
Sbjct: 107 LYALHMSEGTNFLSHLNVFNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILH- 166
Query: 121 LGENSLKFTATCDAAISEEAQRKLGKMFASTSGAENEVESALVAENKGKA--KMSYN-GK 180
G+ +++ A + E RK EN+ + AL+ E +G++ + S N G+
Sbjct: 167 -GKTTIELKDVTSALLLNEKMRK---------KPENQGQ-ALITEGRGRSYQRSSNNYGR 226
Query: 181 QQRRYRGSGCSSGEV-ECYYCHKKGHVKRFYRKFKEDCEKRNNSTNVVTEEERIDEFLAC 240
R + S V CY C++ GH FK DC + ++ D A
Sbjct: 227 SGARGKSKNRSKSRVRNCYNCNQPGH-------FKRDCPNPRKGKGETSGQKNDDNTAAM 274
Query: 241 AQRNISV 243
Q N +V
Sbjct: 287 VQNNDNV 274
BLAST of Moc08g14820 vs. ExPASy TrEMBL
Match:
A0A438CRS1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_4222 PE=4 SV=1)
HSP 1 Score: 133.7 bits (335), Expect = 1.1e-27
Identity = 85/228 (37.28%), Postives = 127/228 (55.70%), Query Frame = 0
Query: 1 MADKDWNEMDEQAVANIRMSLSMNVCSLVTKETTAKDLLKVLQDRYEKPSANTKTLPWTR 60
M ++W +D Q + IR++LS +V V KE T DL+K L YEKPSAN K +
Sbjct: 47 MKAEEWALLDRQVLGVIRLTLSRSVAHNVVKEKTTADLMKALSGMYEKPSANNKVHLMKK 106
Query: 61 YFNIHM-EETSVNSHINELTDILNKLEGMGVKIDEDVKAMRFLTSLPDSWETMKTVVSNS 120
FN+ M E SV H+NE I N+L + + D++++A+ L SLP+SWE M+ VSNS
Sbjct: 107 LFNLKMAENASVAQHLNEFNTITNQLSSVEIDFDDEIRALIVLASLPNSWEAMRMAVSNS 166
Query: 121 LGENSLKFTATCDAAISEEAQRK-LGKMFASTSGAENEVESALVAENKGKAKMSYNGKQQ 180
+G+ LK+ D ++EE +R+ G+ S SG+ +E+ NK + N +
Sbjct: 167 IGKEKLKYNDIRDLILAEEIRRRDAGE--TSGSGSALNLETRGRGNNKNSNQGRSNSRNS 226
Query: 181 RRYRGSGCSSGEVECYYCHKKGHVKRFYRKFKEDCEKRNNSTNVVTEE 227
R R SS +V+C+ C K GH KR + K+ + ++S N VTEE
Sbjct: 227 NRNRSKSRSSQQVQCWNCGKTGHFKRQCKSPKK--KNEDDSANAVTEE 270
BLAST of Moc08g14820 vs. ExPASy TrEMBL
Match:
A0A6A2ZHE4 (Callose synthase 12 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110890pilonHSYRG01352 PE=4 SV=1)
HSP 1 Score: 132.9 bits (333), Expect = 1.8e-27
Identity = 87/229 (37.99%), Postives = 122/229 (53.28%), Query Frame = 0
Query: 1 MADKDWNEMDEQAVANIRMSLSMNVCSLVTKETTAKDLLKVLQDRYEKPSANTKTLPWTR 60
M D+DW +D QA+ IR++LS NV + KE T L+ L YEKPSA+ K R
Sbjct: 46 MKDEDWALLDRQALGVIRLTLSRNVAFNIAKEKTTAGLMAALSSMYEKPSASNKVHLMRR 105
Query: 61 YFNIHMEE-TSVNSHINELTDILNKLEGMGVKIDEDVKAMRFLTSLPDSWETMKTVVSNS 120
FN+ M E SV H+NEL I +L + ++ D++V+A+ L+SLPDSW T VS+S
Sbjct: 106 LFNLRMTEGASVAQHLNELNTITTQLSSVEIEFDDEVRALILLSSLPDSWNATVTAVSSS 165
Query: 121 LGENSLKFTATCDAAISEEAQRKLGKMFASTSGAENEVESALVAENKGKA--KMSYNGKQ 180
G + LKF D +SEE +R+ E SAL E++G+ + S G+
Sbjct: 166 SGNSKLKFDDVRDLVLSEEIRRR--------ESGEASTSSALHTESRGRTSERNSNRGRS 225
Query: 181 QRRYRGSGCSSGEVECYYCHKKGHVKRFYRKFKEDCEKRNNSTNVVTEE 227
+ R S + CY C KKGH KR R K+D + ++ VTEE
Sbjct: 226 KSRREKSRTGKKDFTCYNCGKKGHFKRDCRALKKDTGAQESAN--VTEE 264
BLAST of Moc08g14820 vs. ExPASy TrEMBL
Match:
A0A438JLX4 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_3232 PE=4 SV=1)
HSP 1 Score: 132.9 bits (333), Expect = 1.8e-27
Identity = 85/228 (37.28%), Postives = 127/228 (55.70%), Query Frame = 0
Query: 1 MADKDWNEMDEQAVANIRMSLSMNVCSLVTKETTAKDLLKVLQDRYEKPSANTKTLPWTR 60
M ++W +D Q + IR++LS +V V KE T DL+KVL YEKPSAN K +
Sbjct: 47 MKAEEWALLDRQVLGVIRLTLSRSVAHNVVKEKTTTDLMKVLSGMYEKPSANNKVHLMKK 106
Query: 61 YFNIHM-EETSVNSHINELTDILNKLEGMGVKIDEDVKAMRFLTSLPDSWETMKTVVSNS 120
FN+ M E SV H+NE I N+L + + D++++A+ L SLP+SWE M+ VSNS
Sbjct: 107 LFNLKMAENASVAQHLNEFNTITNQLSSVEIDFDDEIRALIVLASLPNSWEAMRMAVSNS 166
Query: 121 LGENSLKFTATCDAAISEEAQRK-LGKMFASTSGAENEVESALVAENKGKAKMSYNGKQQ 180
G+ LK+ D ++EE +R+ G+ S SG+ +E+ N+ + N +
Sbjct: 167 TGKEKLKYNDIQDLILAEEIRRRDAGE--TSGSGSALNLETRGRGNNRNSNQGRSNSRNS 226
Query: 181 RRYRGSGCSSGEVECYYCHKKGHVKRFYRKFKEDCEKRNNSTNVVTEE 227
R R S +V+C+ C K GH KR + K+ + ++S NVVTEE
Sbjct: 227 NRNRSKSRSGQQVQCWNCGKTGHFKRQCKSPKK--KNEDDSANVVTEE 270
BLAST of Moc08g14820 vs. ExPASy TrEMBL
Match:
A0A0D3AEM1 (CCHC-type domain-containing protein OS=Brassica oleracea var. oleracea OX=109376 PE=4 SV=1)
HSP 1 Score: 132.9 bits (333), Expect = 1.8e-27
Identity = 92/244 (37.70%), Postives = 132/244 (54.10%), Query Frame = 0
Query: 1 MADKDWNEMDEQAVANIRMSLSMNVCSLVTKETTAKDLLKVLQDRYEKPSANTKTLPWTR 60
M +W +D Q + IR++LS NV V KE T + L+KVL D YEKPSAN+K +
Sbjct: 46 MDQDEWELLDRQVLGVIRLTLSKNVAHNVVKEKTTEGLMKVLSDMYEKPSANSKVFLMKK 105
Query: 61 YFNIHMEETS-VNSHINELTDILNKLEGMGVKIDEDVKAMRFLTSLPDSWETMKTVVSNS 120
F++ MEE V +HINE I+N+L + ++ +++V+A+ L SLP+SWE+M+ VSNS
Sbjct: 106 LFHLKMEEGGLVTAHINEFNTIVNQLSSVEIEFEDEVRALILLASLPNSWESMRVAVSNS 165
Query: 121 LGENSLKFTATCDAAISEEAQRKLGKMFASTSGAENEVESALVAENKGKAKMSYNGKQQR 180
+G LKF D ++EE R++ ASTS A N VE+ N + S + R
Sbjct: 166 VGTQKLKFNDVRDRILAEEV-RRIDSGEASTSSAFN-VENR--GRNPDRNNRSNGRSKSR 225
Query: 181 RYRGSGCSSGEVECYYCHKKGHVKRFYRKFKEDCEKRNNSTNVVTEEERIDEFLACAQRN 240
RG EC+ C K GH+K+ R + + N VT E ID+ L
Sbjct: 226 NGRGQSKFRQPAECWNCGKIGHIKKNCRAPPKKEDNTRGGANAVTRE--IDDALV----- 278
Query: 241 ISVD 244
+SVD
Sbjct: 286 VSVD 278
BLAST of Moc08g14820 vs. ExPASy TrEMBL
Match:
A0A445FR60 (Nucleolar pre-ribosomal-associated protein 1 isoform B OS=Glycine soja OX=3848 GN=D0Y65_047996 PE=4 SV=1)
HSP 1 Score: 132.5 bits (332), Expect = 2.4e-27
Identity = 89/246 (36.18%), Postives = 133/246 (54.07%), Query Frame = 0
Query: 1 MADKDWNEMDEQAVANIRMSLSMNVCSLVTKETTAKDLLKVLQDRYEKPSANTKTLPWTR 60
M ++WN +D QA+ IR++L+ NV + E T L+K L D YEKPSA K R
Sbjct: 1919 MKQEEWNLLDRQALGVIRLTLAKNVAFNIVNEKTTAGLMKALSDMYEKPSAANKVYLMRR 1978
Query: 61 YFNIHMEE-TSVNSHINELTDILNKLEGMGVKIDEDVKAMRFLTSLPDSWETMKTVVSNS 120
FN+ M E SV HINE IL +LE + +K +++VKA+ L+SLPDSW T VS+S
Sbjct: 1979 LFNLKMGECISVTDHINEFNTILAQLESVQIKFEDEVKALILLSSLPDSWAATVTAVSSS 2038
Query: 121 LGENSLKFTATCDAAISEEAQRKLGKMFASTSGAENEVESALVAENKGK-AKMSYNGKQQ 180
EN+LK + D +SE+ +++ S + + SAL E KG+ + NG+ +
Sbjct: 2039 TRENTLKLSDIRDLILSEDVRKR-----DSGESSSHVSNSALNIEGKGRTTQKGQNGRGR 2098
Query: 181 RRYRGSGCS--SGEVECYYCHKKGHVKRFYRKFKEDCEKRN------NSTNVVTEEERID 237
+ RG G +V C+ C K+GH Y+ K++ +N S N T+E +D
Sbjct: 2099 SKSRGKGQRKFQSDVTCWNCDKRGHFSNQYKAPKKNKSHKNKKRDDDESANAATDE--LD 2157
BLAST of Moc08g14820 vs. TAIR 10
Match:
AT3G29785.1 (unknown protein; Has 90 Blast hits to 90 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 45.4 bits (106), Expect = 7.4e-05
Identity = 22/56 (39.29%), Postives = 33/56 (58.93%), Query Frame = 0
Query: 1 MADKDWNEMDEQAVANIRMSLSMNVCSLVTKETTAKDLLKVLQDRYEKPSANTKTL 57
M+ DWN + Q + IR+++S N+ V KE + L+KVL D Y+KPS N +
Sbjct: 41 MSQDDWNILYRQVLDVIRLTISKNIAHNVAKEKSPDGLMKVLSDIYKKPSTNNTVI 96
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAG7584790.1 | 5.8e-28 | 37.39 | Zinc finger CCHC-type superfamily [Arabidopsis thaliana x Arabidopsis arenosa] | [more] |
| KAG7561662.1 | 1.3e-27 | 36.97 | Zinc finger CCHC-type superfamily [Arabidopsis thaliana x Arabidopsis arenosa] | [more] |
| RVW25839.1 | 2.2e-27 | 37.28 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | [more] |
| KAE8691424.1 | 3.8e-27 | 37.99 | Callose synthase 12 [Hibiscus syriacus] | [more] |
| KAG7593230.1 | 3.8e-27 | 38.46 | Pentatricopeptide repeat [Arabidopsis thaliana x Arabidopsis arenosa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| P10978 | 3.4e-15 | 27.94 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A438CRS1 | 1.1e-27 | 37.28 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX... | [more] |
| A0A6A2ZHE4 | 1.8e-27 | 37.99 | Callose synthase 12 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110890pilonHSYR... | [more] |
| A0A438JLX4 | 1.8e-27 | 37.28 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX... | [more] |
| A0A0D3AEM1 | 1.8e-27 | 37.70 | CCHC-type domain-containing protein OS=Brassica oleracea var. oleracea OX=109376... | [more] |
| A0A445FR60 | 2.4e-27 | 36.18 | Nucleolar pre-ribosomal-associated protein 1 isoform B OS=Glycine soja OX=3848 G... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT3G29785.1 | 7.4e-05 | 39.29 | unknown protein; Has 90 Blast hits to 90 proteins in 7 species: Archae - 0; Bact... | [more] |
