Moc08g14530 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc08g14530
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	chr8: 11088485 .. 11090005 (+)
RNA-Seq Expression	Moc08g14530
Synteny	Moc08g14530

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTGACAGATATCAAGCACACCATTATTACGATGGGGTCCTGAAGTTCAATGGGGAGAATTTCAGTTTTTGGAAGATGCAGGTAAAGGATCTTCTTACATGCAAGAAGATACACAAGACTTTAGGGGAAAGACCAGCACGAATGCCGGACAAGGATTGGAATGAGATGGATGAGCAGGCTGTTGCCAACATCAGAATGACATTATCAATGAATGTTTGTAGTCTGGTGGCGAAAGAGACTACAGCGAAAGATTTGTTGAAGGCCTTGCAAGATAGGTATGAAAAACTTTCTGCCAATACAAAGATACTTCTATGGATGAAGTATTTTAATATCCACATGGATGAGGGAACCTCGGTGAATTCCCACATTAATGAACTCACCGATATCTTGAACAAGTTAGAAGGCATGGGTGTCAAGATTGACGAGGAGGTGAAAGCTATGAGGCTGTTGACGTCTTTGCCAGTTGGGAGACGATGAAGACCGCAGTGTCGAATTCGCTAGGGGAAAATAACTTGAAATTTACAGCTATTTGTGATGCCGCCTTATCTGAGGAAGCCCGGAGAAATTAGGGAAAATGTCTGCATCTACTTCAGGGGCAGAAAACAGGGTTGAATCGGCTTTGGTAGCTCAGAACAAAGGGAAGGCAAAGATTAGTTACAATGGGAAGCAGTAGCAGAGATATAGCAGGGGTAGTGGGAGTTCCAGTGGAGAAGTAGAGTGTTATTACTGCCACAAGAAGGGACACATTAAACGCTTTTGCAGGAAGTTTAAAGAAGATCTTGAGAAGGGGAACACTACTGCAAATGTTGTAACAGAAGAAGAACGGATGGAAGAGTTTCTGGCTTGTGTTCAGAGGAACATATCTGTAAACCAGTGGGTGGTTGACACTGCAGCATCAGCGCACGTTGCTTCAGACAGACGTTGGTTCTCATCTCTTACTGTAGGTGATTATGGCTCAGTGAAGATGGGGAATGAGAGTATCTCCAAGGTGAGAGGAATTGGAGATGTTTGTTTGAAGACATGCAAAAGGGACGAGTTGGTGCTACGAGGTGTTAGGTATATTCCTAGCTTCAGATTTAATTTGTTATCCACAGGGAAGCTAGATGACGATGGCTACAGCAGTGAGTTTAGTGGGGGTTGCTGGAAGCTTAAGAGGGAATCCAGAGGGGTGGCAACAAGCCACAAGAGATCTTCTATTTATGTTTCAGAATTTGAGGTTGTCAAGGGTTCACTGAGACAGACGATACAGATCAGAAGAATCTGCTATCAGCTCAAGTAAAACAGTTGAGAAGTACAGAAAAGGGAAACGGGAATTTGATAGGCCATCGAGTTCATACCTCAGCTGTCAGACGTTCAGGCAAGCTGGTGAAGTCGCATAGGCGAATTAGTGCATTGAAGGGTATGTGTTCTGTTTCTAGTGTGGTGACAGACTTGGGTGGGAGCGCCAAGTCATCAAGGGAATCTTCCTTCAGCGGTCGTTGGGTTCAATCAAGAAAGGAAGCGACGGGGACTACTTAA

mRNA sequence

ATGGGTGACAGATATCAAGCACACCATTATTACGATGGGGTCCTGAAGTTCAATGGGGAGAATTTCAGTTTTTGGAAGATGCAGGTAAAGGATCTTCTTACATGCAAGAAGATACACAAGACTTTAGGGGAAAGACCAGCACGAATGCCGGACAAGGATTGGAATGAGATGGATGAGCAGGCTGTTGCCAACATCAGAATGACATTATCAATGAATGTTTGTAGTCTGGTGGCGAAAGAGACTACAGCGAAAGATTTGTTGAAGGCCTTGCAAGATAGGTATGAAAAACTTTCTGCCAATACAAAGATACTTCTATGGATGAAGTATTTTAATATCCACATGGATGAGGGAACCTCGGTGAATTCCCACATTAATGAACTCACCGATATCTTGAACAAGTTAGAAGGCATGGGTGTCAAGATTGACGAGGAGGTGAAAGCTATGAGGCTGTTGACCCCGGAGAAATTAGGGAAAATGTCTGCATCTACTTCAGGGGCAGAAAACAGGGTTGAATCGGCTTTGGTAGCTCAGAACAAAGGGAAGGCAAAGATTAGTTACAATGGGAAGCAGAAGTTTAAAGAAGATCTTGAGAAGGGGAACACTACTGCAAATGTTGTAACAGAAGAAGAACGGATGGAAGAGTTTCTGGCTTACGATACAGATCAGAAGAATCTGCTATCAGCTCAAGTAAAACAGTTGAGAAGTACAGAAAAGGGAAACGGGAATTTGATAGGCCATCGAGTTCATACCTCAGCTGTCAGACGTTCAGGCAAGCTGGTGAAGTCGCATAGGCGAATTAGTGCATTGAAGGGTATGTGTTCTGTTTCTAGTGTGGTGACAGACTTGGGTGGGAGCGCCAAGTCATCAAGGGAATCTTCCTTCAGCGGTCGTTGGGTTCAATCAAGAAAGGAAGCGACGGGGACTACTTAA

Coding sequence (CDS)

ATGGGTGACAGATATCAAGCACACCATTATTACGATGGGGTCCTGAAGTTCAATGGGGAGAATTTCAGTTTTTGGAAGATGCAGGTAAAGGATCTTCTTACATGCAAGAAGATACACAAGACTTTAGGGGAAAGACCAGCACGAATGCCGGACAAGGATTGGAATGAGATGGATGAGCAGGCTGTTGCCAACATCAGAATGACATTATCAATGAATGTTTGTAGTCTGGTGGCGAAAGAGACTACAGCGAAAGATTTGTTGAAGGCCTTGCAAGATAGGTATGAAAAACTTTCTGCCAATACAAAGATACTTCTATGGATGAAGTATTTTAATATCCACATGGATGAGGGAACCTCGGTGAATTCCCACATTAATGAACTCACCGATATCTTGAACAAGTTAGAAGGCATGGGTGTCAAGATTGACGAGGAGGTGAAAGCTATGAGGCTGTTGACCCCGGAGAAATTAGGGAAAATGTCTGCATCTACTTCAGGGGCAGAAAACAGGGTTGAATCGGCTTTGGTAGCTCAGAACAAAGGGAAGGCAAAGATTAGTTACAATGGGAAGCAGAAGTTTAAAGAAGATCTTGAGAAGGGGAACACTACTGCAAATGTTGTAACAGAAGAAGAACGGATGGAAGAGTTTCTGGCTTACGATACAGATCAGAAGAATCTGCTATCAGCTCAAGTAAAACAGTTGAGAAGTACAGAAAAGGGAAACGGGAATTTGATAGGCCATCGAGTTCATACCTCAGCTGTCAGACGTTCAGGCAAGCTGGTGAAGTCGCATAGGCGAATTAGTGCATTGAAGGGTATGTGTTCTGTTTCTAGTGTGGTGACAGACTTGGGTGGGAGCGCCAAGTCATCAAGGGAATCTTCCTTCAGCGGTCGTTGGGTTCAATCAAGAAAGGAAGCGACGGGGACTACTTAA

Protein sequence

MGDRYQAHHYYDGVLKFNGENFSFWKMQVKDLLTCKKIHKTLGERPARMPDKDWNEMDEQAVANIRMTLSMNVCSLVAKETTAKDLLKALQDRYEKLSANTKILLWMKYFNIHMDEGTSVNSHINELTDILNKLEGMGVKIDEEVKAMRLLTPEKLGKMSASTSGAENRVESALVAQNKGKAKISYNGKQKFKEDLEKGNTTANVVTEEERMEEFLAYDTDQKNLLSAQVKQLRSTEKGNGNLIGHRVHTSAVRRSGKLVKSHRRISALKGMCSVSSVVTDLGGSAKSSRESSFSGRWVQSRKEATGTT

Homology

[Close]

BLAST of Moc08g14530 vs. NCBI nr
Match: KAG7593230.1 (Pentatricopeptide repeat [Arabidopsis thaliana x Arabidopsis arenosa])

HSP 1 Score: 132.1 bits (331), Expect = 8.2e-27
Identity = 66/156 (42.31%), Postives = 101/156 (64.74%), Query Frame = 0


Query: 13  GVLKFNGENFSFWKMQVKDLLTCKKIHKTLGERPARMPDKDWNEMDEQAVANIRMTLSMN 72
           G+ KF+G +F+FW+MQ++D L  KK+H+ L  +P +M  ++W+ +D Q +  IR+TLS N
Sbjct: 10  GIGKFDGTDFAFWRMQIEDYLYGKKLHQPLSMKPEKMAQEEWDLLDRQVLGVIRLTLSKN 69

Query: 73  VCSLVAKETTAKDLLKALQDRYEKLSANTKILLWMKYFNIHMDEGTSVNSHINELTDILN 132
           V   VAKE T + L+K L D YEK SAN K+ L  K F++ M+EG  V +H+NE   I+N
Sbjct: 70  VAHNVAKEKTTEGLMKVLSDMYEKPSANNKVFLMKKLFHLKMEEGGPVATHVNEFNTIVN 129

Query: 133 KLEGMGVKIDEEVKAMRLLT--PEKLGKMSASTSGA 167
           +L  + ++ D+EV+A+ LL   P     M A+ S +
Sbjct: 130 QLSSVEIEFDDEVRALILLASLPNSWEPMRAAVSNS 165

[Close]

BLAST of Moc08g14530 vs. NCBI nr
Match: KAG7584790.1 (Zinc finger CCHC-type superfamily [Arabidopsis thaliana x Arabidopsis arenosa])

HSP 1 Score: 132.1 bits (331), Expect = 8.2e-27
Identity = 66/156 (42.31%), Postives = 101/156 (64.74%), Query Frame = 0


Query: 13  GVLKFNGENFSFWKMQVKDLLTCKKIHKTLGERPARMPDKDWNEMDEQAVANIRMTLSMN 72
           G+ KF+G +F+FW+MQ++D L  KK+H+ L  +P +M  ++W+ +D Q +  IR+TLS N
Sbjct: 10  GIGKFDGTDFAFWRMQIEDYLYGKKLHQPLSMKPEKMAQEEWDLLDRQVLGVIRLTLSKN 69

Query: 73  VCSLVAKETTAKDLLKALQDRYEKLSANTKILLWMKYFNIHMDEGTSVNSHINELTDILN 132
           V   VAKE T + L+K L D YEK SAN K+ L  K F++ M+EG  V +H+NE   I+N
Sbjct: 70  VAHNVAKEKTTEGLMKVLSDMYEKPSANNKVFLMKKLFHLKMEEGGPVATHVNEFNTIVN 129

Query: 133 KLEGMGVKIDEEVKAMRLLT--PEKLGKMSASTSGA 167
           +L  + ++ D+EV+A+ LL   P     M A+ S +
Sbjct: 130 QLSSVEIEFDDEVRALILLASLPNSWEPMRAAVSNS 165

[Close]

BLAST of Moc08g14530 vs. NCBI nr
Match: KAG7561662.1 (Zinc finger CCHC-type superfamily [Arabidopsis thaliana x Arabidopsis arenosa])

HSP 1 Score: 131.3 bits (329), Expect = 1.4e-26
Identity = 65/156 (41.67%), Postives = 101/156 (64.74%), Query Frame = 0


Query: 13  GVLKFNGENFSFWKMQVKDLLTCKKIHKTLGERPARMPDKDWNEMDEQAVANIRMTLSMN 72
           G+ KF+G +F+FW+MQ++D L  KK+H+ L  +P +M  ++W+ +D Q +  IR+TLS N
Sbjct: 10  GIGKFDGTDFAFWRMQIEDYLYGKKLHQPLSMKPEKMAQEEWDLLDRQVLGVIRLTLSKN 69

Query: 73  VCSLVAKETTAKDLLKALQDRYEKLSANTKILLWMKYFNIHMDEGTSVNSHINELTDILN 132
           V   VAKE T + L+K L D YEK SAN K+ L  K F++ M+EG  V +H+NE   I+N
Sbjct: 70  VAHNVAKEKTTEGLMKVLSDMYEKPSANNKVFLMKKLFHLKMEEGGPVATHVNEFNTIVN 129

Query: 133 KLEGMGVKIDEEVKAMRLLT--PEKLGKMSASTSGA 167
           +L  + ++ D+EV+A+ L+   P     M A+ S +
Sbjct: 130 QLSSVEIEFDDEVRALILIASLPNSWEPMRAAVSNS 165

[Close]

BLAST of Moc08g14530 vs. NCBI nr
Match: VFQ60264.1 (unnamed protein product [Cuscuta campestris])

HSP 1 Score: 130.6 bits (327), Expect = 2.4e-26
Identity = 64/137 (46.72%), Postives = 95/137 (69.34%), Query Frame = 0


Query: 16  KFNGENFSFWKMQVKDLLTCKKIHKTLGERPARMPDKDWNEMDEQAVANIRMTLSMNVCS 75
           KFNG +FS+WKMQ++DLL  K +   LG++P +M D DW  +D +A++ IR++L+ NV  
Sbjct: 11  KFNGTDFSWWKMQIEDLLVQKDLDVVLGDKPEKMSDADWAGLDRKAMSVIRLSLTKNVAF 70

Query: 76  LVAKETTAKDLLKALQDRYEKLSANTKILLWMKYFNIHMDEGTSVNSHINELTDILNKLE 135
            + KE TAK++++AL + YEK SA  K+ L  +  N  M EGTSV  HIN+L  IL +L 
Sbjct: 71  NILKEKTAKEIMEALSNMYEKPSAANKVFLIRELVNTKMKEGTSVTEHINKLNSILARLL 130

Query: 136 GMGVKIDEEVKAMRLLT 153
            +G+K D+EV+A+ LL+
Sbjct: 131 SVGIKFDDEVQALLLLS 147

[Close]

BLAST of Moc08g14530 vs. NCBI nr
Match: VFQ71379.1 (unnamed protein product [Cuscuta campestris])

HSP 1 Score: 129.4 bits (324), Expect = 5.3e-26
Identity = 64/137 (46.72%), Postives = 93/137 (67.88%), Query Frame = 0


Query: 16  KFNGENFSFWKMQVKDLLTCKKIHKTLGERPARMPDKDWNEMDEQAVANIRMTLSMNVCS 75
           KF+G +FS+WKMQ++DLL  K ++  LG++P +M D DW  +D +A++ IR++L+ NV  
Sbjct: 11  KFDGIDFSWWKMQIEDLLVQKDLNVVLGDKPEKMSDADWAGLDRKAMSVIRLSLTKNVAF 70

Query: 76  LVAKETTAKDLLKALQDRYEKLSANTKILLWMKYFNIHMDEGTSVNSHINELTDILNKLE 135
            + KE TAK +L AL + YEK S   K+ L  +  N  M EGTSV  HIN+L  IL +L 
Sbjct: 71  NILKEKTAKGILAALSNMYEKPSTANKVFLIRELVNTRMKEGTSVTEHINKLNSILTRLA 130

Query: 136 GMGVKIDEEVKAMRLLT 153
            +G+K D+EVKA+ LL+
Sbjct: 131 SVGIKFDDEVKALLLLS 147

[Close]

BLAST of Moc08g14530 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 8.5e-19
Identity = 62/192 (32.29%), Postives = 104/192 (54.17%), Query Frame = 0


Query: 14  VLKFNGEN-FSFWKMQVKDLLTCKKIHKTL---GERPARMPDKDWNEMDEQAVANIRMTL 73
           V KFNG+N FS W+ +++DLL  + +HK L    ++P  M  +DW ++DE+A + IR+ L
Sbjct: 8   VAKFNGDNGFSTWQRRMRDLLIQQGLHKVLDVDSKKPDTMKAEDWADLDERAASAIRLHL 67

Query: 74  SMNVCSLVAKETTAKDLLKALQDRYEKLSANTKILLWMKYFNIHMDEGTSVNSHINELTD 133
           S +V + +  E TA+ +   L+  Y   +   K+ L  + + +HM EGT+  SH+N    
Sbjct: 68  SDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQLYALHMSEGTNFLSHLNVFNG 127

Query: 134 ILNKLEGMGVKIDEEVKAMRLLT--PEKLGKMSASTSGAENRVE-----SALVAQNKGKA 193
           ++ +L  +GVKI+EE KA+ LL   P     ++ +    +  +E     SAL+   K + 
Sbjct: 128 LITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILHGKTTIELKDVTSALLLNEKMRK 187

Query: 194 KISYNGKQKFKE 195
           K    G+    E
Sbjct: 188 KPENQGQALITE 199

[Close]

BLAST of Moc08g14530 vs. ExPASy TrEMBL
Match: A0A0D3DQC2 (Abhydrolase_3 domain-containing protein OS=Brassica oleracea var. oleracea OX=109376 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.2e-26
Identity = 65/155 (41.94%), Postives = 100/155 (64.52%), Query Frame = 0


Query: 14  VLKFNGENFSFWKMQVKDLLTCKKIHKTLGERPARMPDKDWNEMDEQAVANIRMTLSMNV 73
           + KF+G +++FW+MQ++D L  KK+H+ L ++P +M   +W  +D Q +  IR+TLS NV
Sbjct: 359 IRKFDGTDYAFWRMQIEDYLYGKKLHQPLSKKPEKMDQDEWELLDRQVLGVIRLTLSKNV 418

Query: 74  CSLVAKETTAKDLLKALQDRYEKLSANTKILLWMKYFNIHMDEGTSVNSHINELTDILNK 133
              VAKE TA+ L+K L D YEK SAN K+ L  K F++ M+EG  V +H+NE   I+N+
Sbjct: 419 AHNVAKEKTAEGLMKVLSDMYEKPSANNKVFLMKKLFHLKMEEGGLVAAHVNEFNTIVNQ 478

Query: 134 LEGMGVKIDEEVKAMRLLT--PEKLGKMSASTSGA 167
           L  + ++ D+EV+A+ LL   P     M A+ S +
Sbjct: 479 LSSVEIEFDDEVRALILLASLPNSREPMRAAVSNS 513

[Close]

BLAST of Moc08g14530 vs. ExPASy TrEMBL
Match: A0A484K8X3 (Uncharacterized protein OS=Cuscuta campestris OX=132261 GN=CCAM_LOCUS2040 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.2e-26
Identity = 64/137 (46.72%), Postives = 95/137 (69.34%), Query Frame = 0


Query: 16  KFNGENFSFWKMQVKDLLTCKKIHKTLGERPARMPDKDWNEMDEQAVANIRMTLSMNVCS 75
           KFNG +FS+WKMQ++DLL  K +   LG++P +M D DW  +D +A++ IR++L+ NV  
Sbjct: 11  KFNGTDFSWWKMQIEDLLVQKDLDVVLGDKPEKMSDADWAGLDRKAMSVIRLSLTKNVAF 70

Query: 76  LVAKETTAKDLLKALQDRYEKLSANTKILLWMKYFNIHMDEGTSVNSHINELTDILNKLE 135
            + KE TAK++++AL + YEK SA  K+ L  +  N  M EGTSV  HIN+L  IL +L 
Sbjct: 71  NILKEKTAKEIMEALSNMYEKPSAANKVFLIRELVNTKMKEGTSVTEHINKLNSILARLL 130

Query: 136 GMGVKIDEEVKAMRLLT 153
            +G+K D+EV+A+ LL+
Sbjct: 131 SVGIKFDDEVQALLLLS 147

[Close]

BLAST of Moc08g14530 vs. ExPASy TrEMBL
Match: A0A484N247 (CCHC-type domain-containing protein OS=Cuscuta campestris OX=132261 GN=CCAM_LOCUS37137 PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 2.6e-26
Identity = 68/154 (44.16%), Postives = 105/154 (68.18%), Query Frame = 0


Query: 16  KFNGENFSFWKMQVKDLLTCKKIHKTLGERPARMPDKDWNEMDEQAVANIRMTLSMNVCS 75
           KF+G +FS+W++Q++DLL  K +   LG++P +M D DW  +D +A++ IR++L+ NV  
Sbjct: 11  KFDGTDFSWWRVQIEDLLVQKDLDVVLGDKPEKMSDADWAGLDRKAMSVIRLSLTKNVAF 70

Query: 76  LVAKETTAKDLLKALQDRYEKLSANTKILLWMKYFNIHMDEGTSVNSHINELTDILNKLE 135
            + KETTAK +++AL + YEK SA  K+ L  ++ N  M EGTSV  HIN+L  IL +L 
Sbjct: 71  NILKETTAKGIMEALSNMYEKPSAANKVFLIREFVNTRMKEGTSVTEHINKLNSILARLL 130

Query: 136 GMGVKIDEEVKAMRLLT--PEK-LGKMSASTSGA 167
            +G+K D+EV+A+ LL+  P+   G ++A TS A
Sbjct: 131 SVGIKFDDEVQALLLLSSFPDSWSGTVTAVTSSA 164

[Close]

BLAST of Moc08g14530 vs. ExPASy TrEMBL
Match: A0A484L4X7 (CCHC-type domain-containing protein OS=Cuscuta campestris OX=132261 GN=CCAM_LOCUS13155 PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 2.6e-26
Identity = 64/137 (46.72%), Postives = 93/137 (67.88%), Query Frame = 0


Query: 16  KFNGENFSFWKMQVKDLLTCKKIHKTLGERPARMPDKDWNEMDEQAVANIRMTLSMNVCS 75
           KF+G +FS+WKMQ++DLL  K ++  LG++P +M D DW  +D +A++ IR++L+ NV  
Sbjct: 11  KFDGIDFSWWKMQIEDLLVQKDLNVVLGDKPEKMSDADWAGLDRKAMSVIRLSLTKNVAF 70

Query: 76  LVAKETTAKDLLKALQDRYEKLSANTKILLWMKYFNIHMDEGTSVNSHINELTDILNKLE 135
            + KE TAK +L AL + YEK S   K+ L  +  N  M EGTSV  HIN+L  IL +L 
Sbjct: 71  NILKEKTAKGILAALSNMYEKPSTANKVFLIRELVNTRMKEGTSVTEHINKLNSILTRLA 130

Query: 136 GMGVKIDEEVKAMRLLT 153
            +G+K D+EVKA+ LL+
Sbjct: 131 SVGIKFDDEVKALLLLS 147

[Close]

BLAST of Moc08g14530 vs. ExPASy TrEMBL
Match: A0A484MTE7 (CCHC-type domain-containing protein OS=Cuscuta campestris OX=132261 GN=CCAM_LOCUS33866 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 3.4e-26
Identity = 63/137 (45.99%), Postives = 95/137 (69.34%), Query Frame = 0


Query: 16  KFNGENFSFWKMQVKDLLTCKKIHKTLGERPARMPDKDWNEMDEQAVANIRMTLSMNVCS 75
           KF+G +FS+WKMQ++DLL  K +   LG++P +M D+DW  +D +A++ IR++L+ NV  
Sbjct: 210 KFDGTDFSWWKMQIEDLLVQKDLDAVLGDKPEKMSDRDWAGLDRKAMSVIRLSLTKNVAF 269

Query: 76  LVAKETTAKDLLKALQDRYEKLSANTKILLWMKYFNIHMDEGTSVNSHINELTDILNKLE 135
            + KE TAK +++AL + YEK SA  K+ L  +  N  M EGTSV  HIN+L  IL +L 
Sbjct: 270 NILKEKTAKGIMEALSNMYEKPSAANKVFLIRELVNTKMKEGTSVTEHINKLNSILARLL 329

Query: 136 GMGVKIDEEVKAMRLLT 153
            +G+K D+EV+A+ LL+
Sbjct: 330 SVGIKFDDEVQALLLLS 346

[Close]

BLAST of Moc08g14530 vs. TAIR 10
Match: AT3G29785.1 (unknown protein; Has 90 Blast hits to 90 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 70.1 bits (170), Expect = 3.6e-12
Identity = 34/89 (38.20%), Postives = 55/89 (61.80%), Query Frame = 0


Query: 16  KFNGENFSFWKMQVKDLLTCKKIHKTLGERPARMPDKDWNEMDEQAVANIRMTLSMNVCS 75
           K +G ++SF +M+++D L  KK+H+ LG++   M   DWN +  Q +  IR+T+S N+  
Sbjct: 8   KVDGTSYSFCRMKIEDYLYGKKLHQPLGKKVETMSQDDWNILYRQVLDVIRLTISKNIAH 67

Query: 76  LVAKETTAKDLLKALQDRYEKLSANTKIL 105
            VAKE +   L+K L D Y+K S N  ++
Sbjct: 68  NVAKEKSPDGLMKVLSDIYKKPSTNNTVI 96

The following BLAST results are available for this feature:

BLAST of Moc08g14530 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7593230.1	8.2e-27	42.31	Pentatricopeptide repeat [Arabidopsis thaliana x Arabidopsis arenosa]	[more]
KAG7584790.1	8.2e-27	42.31	Zinc finger CCHC-type superfamily [Arabidopsis thaliana x Arabidopsis arenosa]	[more]
KAG7561662.1	1.4e-26	41.67	Zinc finger CCHC-type superfamily [Arabidopsis thaliana x Arabidopsis arenosa]	[more]
VFQ60264.1	2.4e-26	46.72	unnamed protein product [Cuscuta campestris]	[more]
VFQ71379.1	5.3e-26	46.72	unnamed protein product [Cuscuta campestris]	[more]

BLAST of Moc08g14530 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	8.5e-19	32.29	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]

BLAST of Moc08g14530 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0D3DQC2	1.2e-26	41.94	Abhydrolase_3 domain-containing protein OS=Brassica oleracea var. oleracea OX=10...	[more]
A0A484K8X3	1.2e-26	46.72	Uncharacterized protein OS=Cuscuta campestris OX=132261 GN=CCAM_LOCUS2040 PE=4 S...	[more]
A0A484N247	2.6e-26	44.16	CCHC-type domain-containing protein OS=Cuscuta campestris OX=132261 GN=CCAM_LOCU...	[more]
A0A484L4X7	2.6e-26	46.72	CCHC-type domain-containing protein OS=Cuscuta campestris OX=132261 GN=CCAM_LOCU...	[more]
A0A484MTE7	3.4e-26	45.99	CCHC-type domain-containing protein OS=Cuscuta campestris OX=132261 GN=CCAM_LOCU...	[more]

BLAST of Moc08g14530 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G29785.1	3.6e-12	38.20	unknown protein; Has 90 Blast hits to 90 proteins in 7 species: Archae - 0; Bact...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 80..100
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 54..152 e-value: 1.5E-21 score: 76.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 281..309
None	No IPR available	PANTHER	PTHR34676:SF1	ZINC FINGER, CCHC-TYPE, TUBBY C-TERMINAL-LIKE DOMAIN PROTEIN-RELATED	coord: 15..151
None	No IPR available	PANTHER	PTHR34676	FAMILY NOT NAMED	coord: 15..151

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc08g14530.1	Moc08g14530.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0110165	cellular anatomical entity
molecular_function	GO:1901363	heterocyclic compound binding
molecular_function	GO:0097159	organic cyclic compound binding
molecular_function	GO:0016740	transferase activity