Moc08g13180 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc08g13180
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Unknown protein
Location	chr8: 10014667 .. 10015293 (+)
RNA-Seq Expression	Moc08g13180
Synteny	Moc08g13180

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTCAACCAGCAAACTCGACCAATACGGCAGATCGAAGGACTCTAGCTGCCAGCGATACCCACCATTGGGAGGTCGGAGCAGCAGTGGTAGAGGGGCAAGTTCACGACGGCCTTGCAACAGAACCCCTCCGCAGGTCGGCACGAATTACCGCGTCTGTCCTACCACCTGCGCACCCAAGGACATCCAAGGCCACCCGTGGCCGAGGTGGGACCTCTAAGAAGGGCGCCCGGGGTCCAGCCCCGGCTCCACCAAGTGAGAACTTTGACGCACTCCAGAGAGAAATGGAGGCAATGCGCACACAAATGCGGTCCATGGAGGAAATGTATAACGAGATGATAATAGCTGCAGGCGCAGGGTCTCGATCAGAAAATCGAATGACGCGCATTGACATACGCGAGCAAAGGGGTTCCTACCTCGGCCCAGTCGAGGAGGAATATCACGAAGACAACGAGAGCAAGGGACACACTCGCCAGAGAGGAGACCTCCGTGAACACCTCAACAGAAAGAGAGGCTCATCTCTCCGAAAAGGACAGTCACCATCCCGCTCACATAGGAGCTCCTCCGAACTAAAACCGGCCGACCAGAACGAAAGATCGGCCGGGGCAGAAATGGAAAAGATATAG

mRNA sequence

ATGGTTCAACCAGCAAACTCGACCAATACGGCAGATCGAAGGACTCTAGCTGCCAGCGATACCCACCATTGGGAGGTCGGAGCAGCAGTGGTAGAGGGGCAAGTTCACGACGGCCTTGCAACAGAACCCCTCCGCAGGTCGGCACGAATTACCGCGTCTGTCCTACCACCTGCGCACCCAAGGACATCCAAGGCCACCCGTGGCCGAGGTGGGACCTCTAAGAAGGGCGCCCGGGGTCCAGCCCCGGCTCCACCAAGTGAGAACTTTGACGCACTCCAGAGAGAAATGGAGGCAATGCGCACACAAATGCGGTCCATGGAGGAAATGTATAACGAGATGATAATAGCTGCAGGCGCAGGGTCTCGATCAGAAAATCGAATGACGCGCATTGACATACGCGAGCAAAGGGGTTCCTACCTCGGCCCAGTCGAGGAGGAATATCACGAAGACAACGAGAGCAAGGGACACACTCGCCAGAGAGGAGACCTCCGTGAACACCTCAACAGAAAGAGAGGCTCATCTCTCCGAAAAGGACAGTCACCATCCCGCTCACATAGGAGCTCCTCCGAACTAAAACCGGCCGACCAGAACGAAAGATCGGCCGGGGCAGAAATGGAAAAGATATAG

Coding sequence (CDS)

ATGGTTCAACCAGCAAACTCGACCAATACGGCAGATCGAAGGACTCTAGCTGCCAGCGATACCCACCATTGGGAGGTCGGAGCAGCAGTGGTAGAGGGGCAAGTTCACGACGGCCTTGCAACAGAACCCCTCCGCAGGTCGGCACGAATTACCGCGTCTGTCCTACCACCTGCGCACCCAAGGACATCCAAGGCCACCCGTGGCCGAGGTGGGACCTCTAAGAAGGGCGCCCGGGGTCCAGCCCCGGCTCCACCAAGTGAGAACTTTGACGCACTCCAGAGAGAAATGGAGGCAATGCGCACACAAATGCGGTCCATGGAGGAAATGTATAACGAGATGATAATAGCTGCAGGCGCAGGGTCTCGATCAGAAAATCGAATGACGCGCATTGACATACGCGAGCAAAGGGGTTCCTACCTCGGCCCAGTCGAGGAGGAATATCACGAAGACAACGAGAGCAAGGGACACACTCGCCAGAGAGGAGACCTCCGTGAACACCTCAACAGAAAGAGAGGCTCATCTCTCCGAAAAGGACAGTCACCATCCCGCTCACATAGGAGCTCCTCCGAACTAAAACCGGCCGACCAGAACGAAAGATCGGCCGGGGCAGAAATGGAAAAGATATAG

Protein sequence

MVQPANSTNTADRRTLAASDTHHWEVGAAVVEGQVHDGLATEPLRRSARITASVLPPAHPRTSKATRGRGGTSKKGARGPAPAPPSENFDALQREMEAMRTQMRSMEEMYNEMIIAAGAGSRSENRMTRIDIREQRGSYLGPVEEEYHEDNESKGHTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSSELKPADQNERSAGAEMEKI

Homology

[Close]

BLAST of Moc08g13180 vs. NCBI nr
Match: XP_022159327.1 (uncharacterized protein LOC111025738 [Momordica charantia])

HSP 1 Score: 189.9 bits (481), Expect = 2.2e-44
Identity = 111/197 (56.35%), Postives = 131/197 (66.50%), Query Frame = 0


Query: 1   MVQPANSTNTADRRTLAASDTHHWEVGAAVVEGQVHDGLATEPLRRSARITASVLPPAHP 60
           MVQP +STNT DRR L A+D H  EVGA VVEGQ+H+GL TEP  RSARIT   L PAHP
Sbjct: 1   MVQPVDSTNTGDRRALVANDGHQREVGAEVVEGQIHEGLGTEPFCRSARITTPDLSPAHP 60

Query: 61  RTSKATRGRGGTSKKGARGPAPAPPSENFDALQREMEAMRTQMRSMEEMYNEMIIAAGAG 120
           +  KA RGRGG S++   G APAP  ENFDALQ+EMEAMRTQM +MEEMYNEM+ A GAG
Sbjct: 61  KPFKANRGRGGASRRTTLGAAPAPSRENFDALQKEMEAMRTQMLTMEEMYNEMVQAVGAG 120

Query: 121 SRSENRMTRIDIREQRGSYLGPVEEEYHEDNESKGHTRQRGDLREHLNRKRGSSLRKGQS 180
           SRSE+R  R                             +RGDLR+HL+RKR SSLRKG+S
Sbjct: 121 SRSEDRAAR----------------------------DERGDLRDHLSRKRSSSLRKGRS 169

Query: 181 PSRSHRSSSELKPADQN 198
           PS SH++S++   +  N
Sbjct: 181 PSCSHKNSNQQAESSYN 169

[Close]

BLAST of Moc08g13180 vs. NCBI nr
Match: XP_022151719.1 (uncharacterized protein LOC111019634 [Momordica charantia])

HSP 1 Score: 111.3 bits (277), Expect = 1.0e-20
Identity = 62/99 (62.63%), Postives = 78/99 (78.79%), Query Frame = 0


Query: 99  MRTQMRSMEEMYNEMIIAAGAGSRSENRMTRIDIREQRGSYLGPVEEEYHEDNESKGHTR 158
           MRTQM +ME+MY+EM+ AAGA SRSENR+ R D+ EQRG +LGPV++ + E  E + +T 
Sbjct: 1   MRTQMCTMEKMYSEMVQAAGARSRSENRVARNDMHEQRGHHLGPVKKGHPEGGEDEEYTH 60

Query: 159 QRGDLREHLNRKRGSSLRKGQSPSRSHRSSSELKPADQN 198
           QRGDLREHLNRKR SSLRKGQSPS SHR+S++   +  N
Sbjct: 61  QRGDLREHLNRKRSSSLRKGQSPSCSHRNSNQQAESSYN 99

[Close]

BLAST of Moc08g13180 vs. NCBI nr
Match: XP_022152854.1 (uncharacterized protein LOC111020479 [Momordica charantia])

HSP 1 Score: 90.1 bits (222), Expect = 2.4e-14
Identity = 58/120 (48.33%), Postives = 70/120 (58.33%), Query Frame = 0


Query: 1   MVQPANSTNTADRRTLAASDTHHWEVGAAVVEGQVHDGLATEPLRRSARITASVLPPAHP 60
           MVQPANSTNTADRR LAA+  H  EVGA VVEGQ H+ L TEPL RSARIT  VLPPAHP
Sbjct: 1   MVQPANSTNTADRRALAANHGHQREVGAEVVEGQGHEDLGTEPLCRSARITTPVLPPAHP 60

Query: 61  RTSKATRGRGGTSKKGARGPAPAPPS----ENFDALQ----REMEAMRTQMRSMEEMYNE 113
           + SKA                P  P     E FD L+     ++EA++ +    E  +++
Sbjct: 61  KPSKAESSYN-----------PITPGVITREEFDQLKSKFDAQVEALKARCEKKESSFDD 109

[Close]

BLAST of Moc08g13180 vs. NCBI nr
Match: XP_022156088.1 (uncharacterized protein LOC111023060 [Momordica charantia])

HSP 1 Score: 69.7 bits (169), Expect = 3.4e-08
Identity = 45/102 (44.12%), Postives = 64/102 (62.75%), Query Frame = 0


Query: 96  MEAMRTQMRSMEEMYNEMIIAAGAGSRSENRMTRIDIREQRGSYLGPVEEEYHEDNESKG 155
           MEAMRTQMR+MEEMYN+M+  AGA SRS +++   D+ EQ   +  PV+EE+        
Sbjct: 1   MEAMRTQMRTMEEMYNKMVQIAGARSRSGDQVVHEDVHEQGDLHCDPVDEEH-------- 60

Query: 156 HTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSSELKPADQN 198
                GDLR+HLNRKR SS R  ++ +  H++S++   +  N
Sbjct: 61  ---LGGDLRDHLNRKRNSSHRGERTSTYWHKNSNQQAESSYN 91

[Close]

BLAST of Moc08g13180 vs. NCBI nr
Match: XP_022156638.1 (uncharacterized protein LOC111023488 [Momordica charantia])

HSP 1 Score: 68.2 bits (165), Expect = 9.8e-08
Identity = 36/71 (50.70%), Postives = 44/71 (61.97%), Query Frame = 0


Query: 1  MVQPANSTNTADRRTLAASDTHHWEVGAAVVEGQVHDGLATEPLRRSARITASVLPPAHP 60
          MVQP  S NTA+RR L  ++    E+ A V E Q   G   +P RRS R   ++LPPAHP
Sbjct: 1  MVQPIESANTAERRALNGNNDAQHELDAKVTEEQTKAGQEVDPPRRSTRNANTILPPAHP 60

Query: 61 RTSKATRGRGG 72
          R+ KA RGRGG
Sbjct: 61 RSGKANRGRGG 71

[Close]

BLAST of Moc08g13180 vs. ExPASy TrEMBL
Match: A0A6J1DZJ1 (uncharacterized protein LOC111025738 OS=Momordica charantia OX=3673 GN=LOC111025738 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 1.1e-44
Identity = 111/197 (56.35%), Postives = 131/197 (66.50%), Query Frame = 0


Query: 1   MVQPANSTNTADRRTLAASDTHHWEVGAAVVEGQVHDGLATEPLRRSARITASVLPPAHP 60
           MVQP +STNT DRR L A+D H  EVGA VVEGQ+H+GL TEP  RSARIT   L PAHP
Sbjct: 1   MVQPVDSTNTGDRRALVANDGHQREVGAEVVEGQIHEGLGTEPFCRSARITTPDLSPAHP 60

Query: 61  RTSKATRGRGGTSKKGARGPAPAPPSENFDALQREMEAMRTQMRSMEEMYNEMIIAAGAG 120
           +  KA RGRGG S++   G APAP  ENFDALQ+EMEAMRTQM +MEEMYNEM+ A GAG
Sbjct: 61  KPFKANRGRGGASRRTTLGAAPAPSRENFDALQKEMEAMRTQMLTMEEMYNEMVQAVGAG 120

Query: 121 SRSENRMTRIDIREQRGSYLGPVEEEYHEDNESKGHTRQRGDLREHLNRKRGSSLRKGQS 180
           SRSE+R  R                             +RGDLR+HL+RKR SSLRKG+S
Sbjct: 121 SRSEDRAAR----------------------------DERGDLRDHLSRKRSSSLRKGRS 169

Query: 181 PSRSHRSSSELKPADQN 198
           PS SH++S++   +  N
Sbjct: 181 PSCSHKNSNQQAESSYN 169

[Close]

BLAST of Moc08g13180 vs. ExPASy TrEMBL
Match: A0A6J1DDW5 (uncharacterized protein LOC111019634 OS=Momordica charantia OX=3673 GN=LOC111019634 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 4.9e-21
Identity = 62/99 (62.63%), Postives = 78/99 (78.79%), Query Frame = 0


Query: 99  MRTQMRSMEEMYNEMIIAAGAGSRSENRMTRIDIREQRGSYLGPVEEEYHEDNESKGHTR 158
           MRTQM +ME+MY+EM+ AAGA SRSENR+ R D+ EQRG +LGPV++ + E  E + +T 
Sbjct: 1   MRTQMCTMEKMYSEMVQAAGARSRSENRVARNDMHEQRGHHLGPVKKGHPEGGEDEEYTH 60

Query: 159 QRGDLREHLNRKRGSSLRKGQSPSRSHRSSSELKPADQN 198
           QRGDLREHLNRKR SSLRKGQSPS SHR+S++   +  N
Sbjct: 61  QRGDLREHLNRKRSSSLRKGQSPSCSHRNSNQQAESSYN 99

[Close]

BLAST of Moc08g13180 vs. ExPASy TrEMBL
Match: A0A6J1DHB3 (uncharacterized protein LOC111020479 OS=Momordica charantia OX=3673 GN=LOC111020479 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 1.2e-14
Identity = 58/120 (48.33%), Postives = 70/120 (58.33%), Query Frame = 0


Query: 1   MVQPANSTNTADRRTLAASDTHHWEVGAAVVEGQVHDGLATEPLRRSARITASVLPPAHP 60
           MVQPANSTNTADRR LAA+  H  EVGA VVEGQ H+ L TEPL RSARIT  VLPPAHP
Sbjct: 1   MVQPANSTNTADRRALAANHGHQREVGAEVVEGQGHEDLGTEPLCRSARITTPVLPPAHP 60

Query: 61  RTSKATRGRGGTSKKGARGPAPAPPS----ENFDALQ----REMEAMRTQMRSMEEMYNE 113
           + SKA                P  P     E FD L+     ++EA++ +    E  +++
Sbjct: 61  KPSKAESSYN-----------PITPGVITREEFDQLKSKFDAQVEALKARCEKKESSFDD 109

[Close]

BLAST of Moc08g13180 vs. ExPASy TrEMBL
Match: A0A6J1DPN4 (uncharacterized protein LOC111023060 OS=Momordica charantia OX=3673 GN=LOC111023060 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 1.6e-08
Identity = 45/102 (44.12%), Postives = 64/102 (62.75%), Query Frame = 0


Query: 96  MEAMRTQMRSMEEMYNEMIIAAGAGSRSENRMTRIDIREQRGSYLGPVEEEYHEDNESKG 155
           MEAMRTQMR+MEEMYN+M+  AGA SRS +++   D+ EQ   +  PV+EE+        
Sbjct: 1   MEAMRTQMRTMEEMYNKMVQIAGARSRSGDQVVHEDVHEQGDLHCDPVDEEH-------- 60

Query: 156 HTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSSELKPADQN 198
                GDLR+HLNRKR SS R  ++ +  H++S++   +  N
Sbjct: 61  ---LGGDLRDHLNRKRNSSHRGERTSTYWHKNSNQQAESSYN 91

[Close]

BLAST of Moc08g13180 vs. ExPASy TrEMBL
Match: A0A6J1DR60 (uncharacterized protein LOC111023488 OS=Momordica charantia OX=3673 GN=LOC111023488 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 4.7e-08
Identity = 36/71 (50.70%), Postives = 44/71 (61.97%), Query Frame = 0


Query: 1  MVQPANSTNTADRRTLAASDTHHWEVGAAVVEGQVHDGLATEPLRRSARITASVLPPAHP 60
          MVQP  S NTA+RR L  ++    E+ A V E Q   G   +P RRS R   ++LPPAHP
Sbjct: 1  MVQPIESANTAERRALNGNNDAQHELDAKVTEEQTKAGQEVDPPRRSTRNANTILPPAHP 60

Query: 61 RTSKATRGRGG 72
          R+ KA RGRGG
Sbjct: 61 RSGKANRGRGG 71

The following BLAST results are available for this feature:

BLAST of Moc08g13180 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022159327.1	2.2e-44	56.35	uncharacterized protein LOC111025738 [Momordica charantia]	[more]
XP_022151719.1	1.0e-20	62.63	uncharacterized protein LOC111019634 [Momordica charantia]	[more]
XP_022152854.1	2.4e-14	48.33	uncharacterized protein LOC111020479 [Momordica charantia]	[more]
XP_022156088.1	3.4e-08	44.12	uncharacterized protein LOC111023060 [Momordica charantia]	[more]
XP_022156638.1	9.8e-08	50.70	uncharacterized protein LOC111023488 [Momordica charantia]	[more]

BLAST of Moc08g13180 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc08g13180 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DZJ1	1.1e-44	56.35	uncharacterized protein LOC111025738 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1DDW5	4.9e-21	62.63	uncharacterized protein LOC111019634 OS=Momordica charantia OX=3673 GN=LOC111019...	[more]
A0A6J1DHB3	1.2e-14	48.33	uncharacterized protein LOC111020479 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]
A0A6J1DPN4	1.6e-08	44.12	uncharacterized protein LOC111023060 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A6J1DR60	4.7e-08	50.70	uncharacterized protein LOC111023488 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]

BLAST of Moc08g13180 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 89..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 50..90
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 134..169
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 188..208
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 134..208

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc08g13180.1	Moc08g13180.1	mRNA