Moc08g13080 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc08g13080
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	light-regulated protein-like
Location	chr8: 9956928 .. 9958668 (+)
RNA-Seq Expression	Moc08g13080
Synteny	Moc08g13080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAAAGGAAGGAAAAGCAAAGGAATCTTATCTGGAGGAGCAGGCTCAGGCTGTTGCATATAAATTGGTAATCTCAGTAACATGCTTCTACTCATTCAACTCTCAAACTCACCACTAATTATCACTTCCAAATTACATAATTTTTAGCATTAAACATCATAAGAATGCAGGCTGTTCTTACCATTCCTGTCCTTCCCCTTCTCCTCCCAACACCTTCCAACAACTCTTTTCCCTTGAACTCTTTCGGCTCTCTCTCGTCACGTCGCCCCGCAATCAAAGCAACCTCCACGGTCGCCTACGACACCTCGGTGGTTGATTATAGCTCCGCTGTCTCGTAAGTTATTTTCTTTCATCTTTAGGTATTGAACTCGAACCATCCCATGTCAATGTATAAAAGCAGACATGACAGGAGGCAAGATAAGAAGGACATATTAAATTATAAGTTTGGTCTTTAAACTTTTAAAGTTAACTCGTTAGTTTACCATTTACAAGGCCTACCTACAATATGATTCAAAGATTACATGGTGAGCAGATTCTTGACAATTCAAATATTTAGTAGTATAAACATTCGACTTTACGAAATTCGAGTTCATCAACTCGGTATAAACATAAAATATTTTGAAATACACAGACTAAATAGAATATCCATCTTGAGGATTAGCATGTATATAATCGTCAGGATGCTCCAAAACGTTAAGAGCATAAAATTCATACATCTATTAGAAGTTTTTTAAAGTACCTTCCCAATTGATTGGACAATAGAACTATAAAAGTTTTGACCGATCGGATCAGAGAGAGGTGTTAGAATATAAATAAATAATTATATTCCTCATAATCCATTAACTTAAGTTTTTGGATTCAGCGGTGGTGGAAAGTCGCTAAATATGAAACTTTTCAAATACAAAACTTTATAATTCATCTAAGTAGTTGATTGTATTGTGTTGTTGCAGAGTGTTTCCTGCTGAAGCATGTGAGATAATTGGTGGAGAAGCGTGTTGGGCTCATATTTTTCCAGAAGTGAGGCTTCAGCCTCAGCCTCTGGAAAACGCCCCATCAAACGCCGTCGCTTTGGAAGATATTGATAGAGAATATCTTGATTACTCCGATTCTAGCACGTGCGTCACACGCTCATCCATCACTACCCTTTTTCCCTTTTCTTTTCCTTCTTTTAAATTTTTCAAATTTATTCGTCTTGAAGATTTCTGATTTAAGGTACATGGTTGATATAACTAATTAAAATTTGATATAAGATATATTAGTCACACTAAATATATTAGTGATATATTTCATTTTAAATTTATCACTAACATATATCGATATTATAATTAATATTTGGACAATGCCACTATTTATTTTGGCTATATTTGCTGTTAACTATTAAAATTTTTGCTCTATTTGGAACGACTTTTTTTTTTCTTTTTAATCCTTTTATCTGTATATCTCTTACAATTTTATAAATATAGATTAAAATAGTTATTTTTAAAAATATAAATATCAAAATAGACAAAAACTAAAATAGAGTTTAAACCTAATTTTGAATCTACGAGCTGAAGTGGTTTGGTTTTGGTATTTTTCAAAAGTGGTGCATGCTACAGTTACAGAAAAATCCTTGAAACTGTGTGCAATGCATTGGAGTTTGTAGTAATTACCACTGAGACTGAACTTTGCCTTACAATTATTGCAGCGTTTTCCTAGGAGAGGCTTGTGATGATCTTGGTGGAGACTTCTGTGGAGCATAG

mRNA sequence

ATGTCAAAGGAAGGAAAAGCAAAGGAATCTTATCTGGAGGAGCAGGCTCAGGCTGTTGCATATAAATTGGCTGTTCTTACCATTCCTGTCCTTCCCCTTCTCCTCCCAACACCTTCCAACAACTCTTTTCCCTTGAACTCTTTCGGCTCTCTCTCGTCACGTCGCCCCGCAATCAAAGCAACCTCCACGGTCGCCTACGACACCTCGGTGGTTGATTATAGCTCCGCTGTCTCAGTGTTTCCTGCTGAAGCATGTGAGATAATTGGTGGAGAAGCGTGTTGGGCTCATATTTTTCCAGAAGTGAGGCTTCAGCCTCAGCCTCTGGAAAACGCCCCATCAAACGCCGTCGCTTTGGAAGATATTGATAGAGAATATCTTGATTACTCCGATTCTAGCACCGTTTTCCTAGGAGAGGCTTGTGATGATCTTGGTGGAGACTTCTGTGGAGCATAG

Coding sequence (CDS)

ATGTCAAAGGAAGGAAAAGCAAAGGAATCTTATCTGGAGGAGCAGGCTCAGGCTGTTGCATATAAATTGGCTGTTCTTACCATTCCTGTCCTTCCCCTTCTCCTCCCAACACCTTCCAACAACTCTTTTCCCTTGAACTCTTTCGGCTCTCTCTCGTCACGTCGCCCCGCAATCAAAGCAACCTCCACGGTCGCCTACGACACCTCGGTGGTTGATTATAGCTCCGCTGTCTCAGTGTTTCCTGCTGAAGCATGTGAGATAATTGGTGGAGAAGCGTGTTGGGCTCATATTTTTCCAGAAGTGAGGCTTCAGCCTCAGCCTCTGGAAAACGCCCCATCAAACGCCGTCGCTTTGGAAGATATTGATAGAGAATATCTTGATTACTCCGATTCTAGCACCGTTTTCCTAGGAGAGGCTTGTGATGATCTTGGTGGAGACTTCTGTGGAGCATAG

Protein sequence

MSKEGKAKESYLEEQAQAVAYKLAVLTIPVLPLLLPTPSNNSFPLNSFGSLSSRRPAIKATSTVAYDTSVVDYSSAVSVFPAEACEIIGGEACWAHIFPEVRLQPQPLENAPSNAVALEDIDREYLDYSDSSTVFLGEACDDLGGDFCGA

Homology

[Close]

BLAST of Moc08g13080 vs. NCBI nr
Match: XP_022148181.1 (light-regulated protein-like [Momordica charantia])

HSP 1 Score: 253.8 bits (647), Expect = 9.0e-64
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0


Query: 24  AVLTIPVLPLLLPTPSNNSFPLNSFGSLSSRRPAIKATSTVAYDTSVVDYSSAVSVFPAE 83
           AVLTIPVLPLLLPTPSNNSFPLNSFGSLSSRRPAIKATSTVAYDTSVVDYSSAVSVFPAE
Sbjct: 3   AVLTIPVLPLLLPTPSNNSFPLNSFGSLSSRRPAIKATSTVAYDTSVVDYSSAVSVFPAE 62

Query: 84  ACEIIGGEACWAHIFPEVRLQPQPLENAPSNAVALEDIDREYLDYSDSSTVFLGEACDDL 143
           ACEIIGGEACWAHIFPEVRLQPQPLENAPSNAVALEDIDREYLDYSDSSTVFLGEACDDL
Sbjct: 63  ACEIIGGEACWAHIFPEVRLQPQPLENAPSNAVALEDIDREYLDYSDSSTVFLGEACDDL 122

Query: 144 GGDFCGA 151
           GGDFCGA
Sbjct: 123 GGDFCGA 129

[Close]

BLAST of Moc08g13080 vs. NCBI nr
Match: XP_038893926.1 (light-regulated protein, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 167.2 bits (422), Expect = 1.1e-37
Identity = 90/128 (70.31%), Postives = 102/128 (79.69%), Query Frame = 0


Query: 24  AVLTIPVLPLLLPTPSNNS---FPLNSFGSLSSRRPAIKATSTVAYDTSVVDYSSAVSVF 83
           AVL+I V PLL  T SNN+   FPL SF S  SRR AIKAT++V YD S+VDYSSA+SVF
Sbjct: 3   AVLSIAVPPLLPSTLSNNNPSQFPLISFSSHCSRRSAIKATASVVYDASIVDYSSAISVF 62

Query: 84  PAEACEIIGGEACWAHIFPEVRLQPQPLENAPSNAVALEDIDREYLDYSDSSTVFLGEAC 143
           PAEACE IGGEACWA++FPEVR+QP      P  AVALE+IDREYLDY+DS TVF GEAC
Sbjct: 63  PAEACETIGGEACWANMFPEVRIQPSLNNQKP--AVALEEIDREYLDYADSRTVFPGEAC 122

Query: 144 DDLGGDFC 149
           DDLGG+FC
Sbjct: 123 DDLGGEFC 128

[Close]

BLAST of Moc08g13080 vs. NCBI nr
Match: KAA0066931.1 (light-regulated protein isoform X2 [Cucumis melo var. makuwa] >TYK30213.1 light-regulated protein isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 156.4 bits (394), Expect = 2.0e-34
Identity = 96/135 (71.11%), Postives = 108/135 (80.00%), Query Frame = 0


Query: 24  AVLTIPVLPLLLP--TPSNNS---FPLNSFGSLSSRRPAIKATSTVAYDTSVVDYSSAVS 83
           AVL+I V P LLP  T SN+S   FP  +FGS SSRR AIKAT++V YDTSVVDYSSA+S
Sbjct: 4   AVLSIAV-PSLLPSSTLSNSSHSHFPFITFGSNSSRRSAIKATASVVYDTSVVDYSSAIS 63

Query: 84  VFPAEACEIIGGEA-CWAHIFPEVRLQPQPLENAPSNAVA-LEDIDREYLDY-SDSSTVF 143
           VFPAEACE IGGEA CWA++FPEVRLQP  L N  + AVA LE+IDREYLDY +DS TVF
Sbjct: 64  VFPAEACETIGGEACCWANMFPEVRLQPS-LNNNQNPAVANLEEIDREYLDYAADSKTVF 123

Query: 144 LGEACDDLGGDFCGA 151
            GEACDDLGG+FC A
Sbjct: 124 RGEACDDLGGEFCEA 136

[Close]

BLAST of Moc08g13080 vs. NCBI nr
Match: XP_016900821.1 (PREDICTED: light-regulated protein isoform X3 [Cucumis melo] >XP_016900822.1 PREDICTED: light-regulated protein isoform X3 [Cucumis melo])

HSP 1 Score: 154.5 bits (389), Expect = 7.5e-34
Identity = 96/144 (66.67%), Postives = 111/144 (77.08%), Query Frame = 0


Query: 15  QAQAVAYKLAVLTIPVLPLLLP--TPSNNS---FPLNSFGSLSSRRPAIKATSTVAYDTS 74
           +A +   + AVL+I V P LLP  T SN+S   FP  +FGS SSR  AIKAT++V YDTS
Sbjct: 8   RAASAVSEAAVLSIAV-PSLLPSSTLSNSSHSHFPFITFGSNSSRPSAIKATASVVYDTS 67

Query: 75  VVDYSSAVSVFPAEACEIIGGEA-CWAHIFPEVRLQPQPLENAPSNAVA-LEDIDREYLD 134
           VVDYSSA+SVFPAEACE IGGEA CWA++FPEVRLQP  L N  + AVA LE+IDREYLD
Sbjct: 68  VVDYSSAISVFPAEACETIGGEACCWANMFPEVRLQPS-LNNNQNPAVANLEEIDREYLD 127

Query: 135 Y-SDSSTVFLGEACDDLGGDFCGA 151
           Y +DS TVF GEACDDLGG+FC A
Sbjct: 128 YAADSKTVFRGEACDDLGGEFCEA 149

[Close]

BLAST of Moc08g13080 vs. NCBI nr
Match: XP_008450019.2 (PREDICTED: light-regulated protein isoform X2 [Cucumis melo])

HSP 1 Score: 154.5 bits (389), Expect = 7.5e-34
Identity = 97/141 (68.79%), Postives = 110/141 (78.01%), Query Frame = 0


Query: 18  AVAYKLAVLTIPVLPLLLP--TPSNNS---FPLNSFGSLSSRRPAIKATSTVAYDTSVVD 77
           A A + AVL+I V P LLP  T SN+S   FP  +FGS SSR  AIKAT++V YDTSVVD
Sbjct: 17  ARAKQAAVLSIAV-PSLLPSSTLSNSSHSHFPFITFGSNSSRPSAIKATASVVYDTSVVD 76

Query: 78  YSSAVSVFPAEACEIIGGEA-CWAHIFPEVRLQPQPLENAPSNAVA-LEDIDREYLDY-S 137
           YSSA+SVFPAEACE IGGEA CWA++FPEVRLQP  L N  + AVA LE+IDREYLDY +
Sbjct: 77  YSSAISVFPAEACETIGGEACCWANMFPEVRLQPS-LNNNQNPAVANLEEIDREYLDYAA 136

Query: 138 DSSTVFLGEACDDLGGDFCGA 151
           DS TVF GEACDDLGG+FC A
Sbjct: 137 DSKTVFRGEACDDLGGEFCEA 155

[Close]

BLAST of Moc08g13080 vs. ExPASy Swiss-Prot
Match: Q96500 (Light-regulated protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LIR1 PE=1 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 3.7e-20
Identity = 58/126 (46.03%), Postives = 83/126 (65.87%), Query Frame = 0


Query: 33  LLLPTPSNNSFPLNSF----GSLSSRRPAIK-----ATSTVAYDTSVVDYSSAV-SVFPA 92
           +LLP PS+ S P  +F     + +SR  +++     ++S++  D + VDY+S++ SVFPA
Sbjct: 11  ILLPLPSSVSSPKLTFLLPHATKASRLSSLRSNNSSSSSSLTSDPNTVDYNSSILSVFPA 70

Query: 93  EACEIIGGEACWAHIFPEVRLQPQPLENAPSNAVALEDIDREYLDYSDSSTVFLGEACDD 149
           EACE+I G AC A I+PEV+L  +P+    S  VA E +DREY +Y+   TVF  EACDD
Sbjct: 71  EACEVISGYACSADIYPEVKLDTKPV----SRPVASEPVDREYEEYNSPKTVFREEACDD 130

[Close]

BLAST of Moc08g13080 vs. ExPASy Swiss-Prot
Match: Q03200 (Light-regulated protein, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=LIR1 PE=1 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.6e-18
Identity = 51/100 (51.00%), Postives = 68/100 (68.00%), Query Frame = 0


Query: 54  RRPAIK---ATSTVAYDTSVVDYSSAVSVFPAEACEIIGGEACWAHIFPEVRLQPQPLEN 113
           RR A++   A + VA + + VDYSS +SVFP EAC++IGGEAC   ++PE +L       
Sbjct: 30  RRVALRVRAAAAAVAVEAAEVDYSSNISVFPMEACDLIGGEACNVQMYPEAKLSSSAAV- 89

Query: 114 APSNAVALEDIDREYLDYSDSSTVFLGEACDDLGGDFCGA 151
           A S A A E++DR+YL Y + +TVF  EACDDLGG+FC A
Sbjct: 90  AVSRAAA-EEVDRDYLSYDEPTTVFPEEACDDLGGEFCKA 127

[Close]

BLAST of Moc08g13080 vs. ExPASy TrEMBL
Match: A0A6J1D4L7 (light-regulated protein-like OS=Momordica charantia OX=3673 GN=LOC111016917 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 4.4e-64
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0


Query: 24  AVLTIPVLPLLLPTPSNNSFPLNSFGSLSSRRPAIKATSTVAYDTSVVDYSSAVSVFPAE 83
           AVLTIPVLPLLLPTPSNNSFPLNSFGSLSSRRPAIKATSTVAYDTSVVDYSSAVSVFPAE
Sbjct: 3   AVLTIPVLPLLLPTPSNNSFPLNSFGSLSSRRPAIKATSTVAYDTSVVDYSSAVSVFPAE 62

Query: 84  ACEIIGGEACWAHIFPEVRLQPQPLENAPSNAVALEDIDREYLDYSDSSTVFLGEACDDL 143
           ACEIIGGEACWAHIFPEVRLQPQPLENAPSNAVALEDIDREYLDYSDSSTVFLGEACDDL
Sbjct: 63  ACEIIGGEACWAHIFPEVRLQPQPLENAPSNAVALEDIDREYLDYSDSSTVFLGEACDDL 122

Query: 144 GGDFCGA 151
           GGDFCGA
Sbjct: 123 GGDFCGA 129

[Close]

BLAST of Moc08g13080 vs. ExPASy TrEMBL
Match: A0A5A7VMP8 (Light-regulated protein isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold595G00270 PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 9.5e-35
Identity = 96/135 (71.11%), Postives = 108/135 (80.00%), Query Frame = 0


Query: 24  AVLTIPVLPLLLP--TPSNNS---FPLNSFGSLSSRRPAIKATSTVAYDTSVVDYSSAVS 83
           AVL+I V P LLP  T SN+S   FP  +FGS SSRR AIKAT++V YDTSVVDYSSA+S
Sbjct: 4   AVLSIAV-PSLLPSSTLSNSSHSHFPFITFGSNSSRRSAIKATASVVYDTSVVDYSSAIS 63

Query: 84  VFPAEACEIIGGEA-CWAHIFPEVRLQPQPLENAPSNAVA-LEDIDREYLDY-SDSSTVF 143
           VFPAEACE IGGEA CWA++FPEVRLQP  L N  + AVA LE+IDREYLDY +DS TVF
Sbjct: 64  VFPAEACETIGGEACCWANMFPEVRLQPS-LNNNQNPAVANLEEIDREYLDYAADSKTVF 123

Query: 144 LGEACDDLGGDFCGA 151
            GEACDDLGG+FC A
Sbjct: 124 RGEACDDLGGEFCEA 136

[Close]

BLAST of Moc08g13080 vs. ExPASy TrEMBL
Match: A0A1S4DXW1 (light-regulated protein isoform X3 OS=Cucumis melo OX=3656 GN=LOC103491736 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 3.6e-34
Identity = 96/144 (66.67%), Postives = 111/144 (77.08%), Query Frame = 0


Query: 15  QAQAVAYKLAVLTIPVLPLLLP--TPSNNS---FPLNSFGSLSSRRPAIKATSTVAYDTS 74
           +A +   + AVL+I V P LLP  T SN+S   FP  +FGS SSR  AIKAT++V YDTS
Sbjct: 8   RAASAVSEAAVLSIAV-PSLLPSSTLSNSSHSHFPFITFGSNSSRPSAIKATASVVYDTS 67

Query: 75  VVDYSSAVSVFPAEACEIIGGEA-CWAHIFPEVRLQPQPLENAPSNAVA-LEDIDREYLD 134
           VVDYSSA+SVFPAEACE IGGEA CWA++FPEVRLQP  L N  + AVA LE+IDREYLD
Sbjct: 68  VVDYSSAISVFPAEACETIGGEACCWANMFPEVRLQPS-LNNNQNPAVANLEEIDREYLD 127

Query: 135 Y-SDSSTVFLGEACDDLGGDFCGA 151
           Y +DS TVF GEACDDLGG+FC A
Sbjct: 128 YAADSKTVFRGEACDDLGGEFCEA 149

[Close]

BLAST of Moc08g13080 vs. ExPASy TrEMBL
Match: A0A1S3BND3 (light-regulated protein isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491736 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 3.6e-34
Identity = 97/141 (68.79%), Postives = 110/141 (78.01%), Query Frame = 0


Query: 18  AVAYKLAVLTIPVLPLLLP--TPSNNS---FPLNSFGSLSSRRPAIKATSTVAYDTSVVD 77
           A A + AVL+I V P LLP  T SN+S   FP  +FGS SSR  AIKAT++V YDTSVVD
Sbjct: 17  ARAKQAAVLSIAV-PSLLPSSTLSNSSHSHFPFITFGSNSSRPSAIKATASVVYDTSVVD 76

Query: 78  YSSAVSVFPAEACEIIGGEA-CWAHIFPEVRLQPQPLENAPSNAVA-LEDIDREYLDY-S 137
           YSSA+SVFPAEACE IGGEA CWA++FPEVRLQP  L N  + AVA LE+IDREYLDY +
Sbjct: 77  YSSAISVFPAEACETIGGEACCWANMFPEVRLQPS-LNNNQNPAVANLEEIDREYLDYAA 136

Query: 138 DSSTVFLGEACDDLGGDFCGA 151
           DS TVF GEACDDLGG+FC A
Sbjct: 137 DSKTVFRGEACDDLGGEFCEA 155

[Close]

BLAST of Moc08g13080 vs. ExPASy TrEMBL
Match: A0A0A0L8G9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G598910 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 5.2e-33
Identity = 88/132 (66.67%), Postives = 102/132 (77.27%), Query Frame = 0


Query: 24  AVLTIPVLPLLLPTPSNNS-----FPLNSFGSLSSRRPAIKATSTVAYDTSVVDYSSAVS 83
           AVL+I V P LLP+ + +S     FPL +F S SSRR +IKAT++V YDTSVVDYSSA+S
Sbjct: 20  AVLSIAV-PSLLPSSTLSSNKPSHFPLITFSSHSSRRSSIKATASVVYDTSVVDYSSAIS 79

Query: 84  VFPAEACEIIGGEAC-WAHIFPEVRLQPQPLENAPSNAVA-LEDIDREYLDYSDSSTVFL 143
           VFPAEACE IGGEAC W ++FPEVRLQ   L N   N VA  E+IDREYLDY+DS TVF 
Sbjct: 80  VFPAEACETIGGEACGWENMFPEVRLQQASLNN--QNPVASSEEIDREYLDYADSKTVFP 139

Query: 144 GEACDDLGGDFC 149
           GEACDDLGG+FC
Sbjct: 140 GEACDDLGGEFC 148

[Close]

BLAST of Moc08g13080 vs. TAIR 10
Match: AT3G26740.1 (CCR-like )

HSP 1 Score: 99.4 bits (246), Expect = 2.7e-21
Identity = 58/126 (46.03%), Postives = 83/126 (65.87%), Query Frame = 0


Query: 33  LLLPTPSNNSFPLNSF----GSLSSRRPAIK-----ATSTVAYDTSVVDYSSAV-SVFPA 92
           +LLP PS+ S P  +F     + +SR  +++     ++S++  D + VDY+S++ SVFPA
Sbjct: 11  ILLPLPSSVSSPKLTFLLPHATKASRLSSLRSNNSSSSSSLTSDPNTVDYNSSILSVFPA 70

Query: 93  EACEIIGGEACWAHIFPEVRLQPQPLENAPSNAVALEDIDREYLDYSDSSTVFLGEACDD 149
           EACE+I G AC A I+PEV+L  +P+    S  VA E +DREY +Y+   TVF  EACDD
Sbjct: 71  EACEVISGYACSADIYPEVKLDTKPV----SRPVASEPVDREYEEYNSPKTVFREEACDD 130

The following BLAST results are available for this feature:

BLAST of Moc08g13080 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022148181.1	9.0e-64	100.00	light-regulated protein-like [Momordica charantia]	[more]
XP_038893926.1	1.1e-37	70.31	light-regulated protein, chloroplastic-like [Benincasa hispida]	[more]
KAA0066931.1	2.0e-34	71.11	light-regulated protein isoform X2 [Cucumis melo var. makuwa] >TYK30213.1 light-...	[more]
XP_016900821.1	7.5e-34	66.67	PREDICTED: light-regulated protein isoform X3 [Cucumis melo] >XP_016900822.1 PRE...	[more]
XP_008450019.2	7.5e-34	68.79	PREDICTED: light-regulated protein isoform X2 [Cucumis melo]	[more]

BLAST of Moc08g13080 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q96500	3.7e-20	46.03	Light-regulated protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LIR1...	[more]
Q03200	1.6e-18	51.00	Light-regulated protein, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 ...	[more]

BLAST of Moc08g13080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D4L7	4.4e-64	100.00	light-regulated protein-like OS=Momordica charantia OX=3673 GN=LOC111016917 PE=4...	[more]
A0A5A7VMP8	9.5e-35	71.11	Light-regulated protein isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S4DXW1	3.6e-34	66.67	light-regulated protein isoform X3 OS=Cucumis melo OX=3656 GN=LOC103491736 PE=4 ...	[more]
A0A1S3BND3	3.6e-34	68.79	light-regulated protein isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491736 PE=4 ...	[more]
A0A0A0L8G9	5.2e-33	66.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G598910 PE=4 SV=1	[more]

BLAST of Moc08g13080 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G26740.1	2.7e-21	46.03	CCR-like	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009856	Light regulated Lir1	PFAM	PF07207	Lir1	coord: 48..149 e-value: 4.0E-42 score: 143.6
IPR009856	Light regulated Lir1	PANTHER	PTHR36762	LIGHT-REGULATED PROTEIN 1, CHLOROPLASTIC	coord: 24..148
None	No IPR available	PANTHER	PTHR36762:SF3	LIGHT-REGULATED PROTEIN	coord: 24..148

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc08g13080.1	Moc08g13080.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009507	chloroplast