Moc08g12740 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc08g12740
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Transmembrane protein
Location	chr8: 9527170 .. 9527713 (+)
RNA-Seq Expression	Moc08g12740
Synteny	Moc08g12740

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGGAGAAGAGAAGGAGTGCTAATTTTGCATTTGTTTTGTTGTTATGCACCACCGTCATCATCTCGGCTGGTGTTGCTGCAAAAGCAGGCGACGATCACGACAATTTGAGTGTAGAAGAAGAAGCAGGAGCAGCAAGAATTGAGGGCGAGGGCAGGGGCAGGAGTTGGGTTGAAGAAGCATTGGTCGACGCCATTTCTGTGTTCACAGTAACATCCGCAGCACCCCCTTGTGCTACTCCACACTACTGGGACCGCCTTAGGACCTGGGTCCTTGATCCACTGCTCGCCTATCTCTTCCCTCCCAAAATAGAGTAATTACATCTACTCATCTGCATGTGCGTGCGTGCATGCGCGTTGCCTCTAATTTTGTTCATCTGCGTTTGCTTCCAGTTTCCGACCAGGAAAGGCTGACGACGATGAAGATGGCGGCGGGCATGGAAATGAGAACGTGAAGGAAGCTTTAACCAAGAGTTTTGATCAAGGCAAACAAATTGTGCAGGATTCCGCCAAGGCTGCCGCCGACATTGCCGGAGAACTCTAG

mRNA sequence

ATGATGGAGAAGAGAAGGAGTGCTAATTTTGCATTTGTTTTGTTGTTATGCACCACCGTCATCATCTCGGCTGGTGTTGCTGCAAAAGCAGGCGACGATCACGACAATTTGAGTGTAGAAGAAGAAGCAGGAGCAGCAAGAATTGAGGGCGAGGGCAGGGGCAGGAGTTGGGTTGAAGAAGCATTGGTCGACGCCATTTCTGTGTTCACAGTAACATCCGCAGCACCCCCTTGTGCTACTCCACACTACTGGGACCGCCTTAGGACCTGGGTCCTTGATCCACTGCTCGCCTATCTCTTCCCTCCCAAAATAGATTTCCGACCAGGAAAGGCTGACGACGATGAAGATGGCGGCGGGCATGGAAATGAGAACGTGAAGGAAGCTTTAACCAAGAGTTTTGATCAAGGCAAACAAATTGTGCAGGATTCCGCCAAGGCTGCCGCCGACATTGCCGGAGAACTCTAG

Coding sequence (CDS)

ATGATGGAGAAGAGAAGGAGTGCTAATTTTGCATTTGTTTTGTTGTTATGCACCACCGTCATCATCTCGGCTGGTGTTGCTGCAAAAGCAGGCGACGATCACGACAATTTGAGTGTAGAAGAAGAAGCAGGAGCAGCAAGAATTGAGGGCGAGGGCAGGGGCAGGAGTTGGGTTGAAGAAGCATTGGTCGACGCCATTTCTGTGTTCACAGTAACATCCGCAGCACCCCCTTGTGCTACTCCACACTACTGGGACCGCCTTAGGACCTGGGTCCTTGATCCACTGCTCGCCTATCTCTTCCCTCCCAAAATAGATTTCCGACCAGGAAAGGCTGACGACGATGAAGATGGCGGCGGGCATGGAAATGAGAACGTGAAGGAAGCTTTAACCAAGAGTTTTGATCAAGGCAAACAAATTGTGCAGGATTCCGCCAAGGCTGCCGCCGACATTGCCGGAGAACTCTAG

Protein sequence

MMEKRRSANFAFVLLLCTTVIISAGVAAKAGDDHDNLSVEEEAGAARIEGEGRGRSWVEEALVDAISVFTVTSAAPPCATPHYWDRLRTWVLDPLLAYLFPPKIDFRPGKADDDEDGGGHGNENVKEALTKSFDQGKQIVQDSAKAAADIAGEL

Homology

[Close]

BLAST of Moc08g12740 vs. NCBI nr
Match: XP_022148210.1 (uncharacterized protein LOC111016933 [Momordica charantia])

HSP 1 Score: 308.1 bits (788), Expect = 4.2e-80
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   MMEKRRSANFAFVLLLCTTVIISAGVAAKAGDDHDNLSVEEEAGAARIEGEGRGRSWVEE 60
           MMEKRRSANFAFVLLLCTTVIISAGVAAKAGDDHDNLSVEEEAGAARIEGEGRGRSWVEE
Sbjct: 1   MMEKRRSANFAFVLLLCTTVIISAGVAAKAGDDHDNLSVEEEAGAARIEGEGRGRSWVEE 60

Query: 61  ALVDAISVFTVTSAAPPCATPHYWDRLRTWVLDPLLAYLFPPKIDFRPGKADDDEDGGGH 120
           ALVDAISVFTVTSAAPPCATPHYWDRLRTWVLDPLLAYLFPPKIDFRPGKADDDEDGGGH
Sbjct: 61  ALVDAISVFTVTSAAPPCATPHYWDRLRTWVLDPLLAYLFPPKIDFRPGKADDDEDGGGH 120

Query: 121 GNENVKEALTKSFDQGKQIVQDSAKAAADIAGEL 155
           GNENVKEALTKSFDQGKQIVQDSAKAAADIAGEL
Sbjct: 121 GNENVKEALTKSFDQGKQIVQDSAKAAADIAGEL 154

[Close]

BLAST of Moc08g12740 vs. NCBI nr
Match: XP_031737573.1 (uncharacterized protein LOC101222094 [Cucumis sativus] >KGN58430.1 hypothetical protein Csa_000839 [Cucumis sativus])

HSP 1 Score: 79.0 bits (193), Expect = 4.1e-11
Identity = 44/86 (51.16%), Postives = 61/86 (70.93%), Query Frame = 0


Query: 65  AISVFTVTSAAPPCATPHYWDRLRTWVLDPLLAYLFPPKIDFRPGKADDDEDGGG--HGN 124
           A ++++ TS   P     YW+ +R  V++    YLFPPKIDFRPGKA +D+ G    +GN
Sbjct: 33  ANNIYSETSTPNP--PNSYWEEVRK-VVNKAYTYLFPPKIDFRPGKAVEDDSGVSVKNGN 92

Query: 125 ENVKEALTKSFDQGKQIVQDSAKAAA 149
            NVKEA+TKSF++ K++V+DSAKAAA
Sbjct: 93  VNVKEAVTKSFEKTKEMVEDSAKAAA 115

[Close]

BLAST of Moc08g12740 vs. NCBI nr
Match: XP_008460283.1 (PREDICTED: uncharacterized protein LOC103499155 [Cucumis melo] >KAA0065584.1 putative transmembrane protein [Cucumis melo var. makuwa] >TYK07150.1 putative transmembrane protein [Cucumis melo var. makuwa])

HSP 1 Score: 77.8 bits (190), Expect = 9.1e-11
Identity = 43/84 (51.19%), Postives = 60/84 (71.43%), Query Frame = 0


Query: 65  AISVFTVTSAAPPCATPHYWDRLRTWVLDPLLAYLFPPKIDFRPGKADDDEDGGGHGNEN 124
           A +V++ TS   P     YW+ +R  V++   +YLFPPKIDFRPGKA +D+ G    + N
Sbjct: 34  ANNVYSETSTPNP--PNSYWEEVRK-VVNKAYSYLFPPKIDFRPGKAVEDDSGLSVEDGN 93

Query: 125 VKEALTKSFDQGKQIVQDSAKAAA 149
           VKEA+TKSF++ K++V+DSAKAAA
Sbjct: 94  VKEAVTKSFEKTKEMVEDSAKAAA 114

[Close]

BLAST of Moc08g12740 vs. NCBI nr
Match: XP_022948557.1 (uncharacterized protein LOC111452199 [Cucurbita moschata])

HSP 1 Score: 75.1 bits (183), Expect = 5.9e-10
Identity = 46/91 (50.55%), Postives = 62/91 (68.13%), Query Frame = 0


Query: 58  VEEALVDAISVFTVTSAAPPCATPHYWDRLRTWVLDPLLAYLFPPKIDFRPGKADDDEDG 117
           +EE +   IS  +  S+ PP +   YW+ +R  V++  +  LFPPKIDFRPGK    EDG
Sbjct: 18  IEETVGRVISA-SAASSPPPNS---YWEEVRK-VVNRAVTCLFPPKIDFRPGK--PVEDG 77

Query: 118 GGHGNENVKEALTKSFDQGKQIVQDSAKAAA 149
             +GNEN+KE++TKSF   KQ+V+DSAKAAA
Sbjct: 78  QVNGNENMKESITKSFHTTKQMVEDSAKAAA 101

[Close]

BLAST of Moc08g12740 vs. NCBI nr
Match: KAG6571254.1 (hypothetical protein SDJN03_30169, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 75.1 bits (183), Expect = 5.9e-10
Identity = 54/143 (37.76%), Postives = 78/143 (54.55%), Query Frame = 0


Query: 6   RSANFAFVLLLCTTVIISAGVAAKAGDDHDNLSVEEEAGAARIEGEGRGRSWVEEALVDA 65
           +   F  VL+L   V++  G A            +EEA           ++ +EE +   
Sbjct: 3   KKGGFVLVLVLWMVVVVGVGKA------------DEEA-----------QNNIEEIVGRV 62

Query: 66  ISVFTVTSAAPPCATPHYWDRLRTWVLDPLLAYLFPPKIDFRPGKADDDEDGGGHGNENV 125
           IS    +S +PP +   YW+ +R  V++  +  LFPPKIDFRPG  +  EDG  +GNEN+
Sbjct: 63  ISASAASSPSPPNS---YWEEVRK-VVNRAVTCLFPPKIDFRPG--NPVEDGQVNGNENM 116

Query: 126 KEALTKSFDQGKQIVQDSAKAAA 149
           KE++TKSF   KQ+V+DSA AAA
Sbjct: 123 KESITKSFHTTKQMVEDSANAAA 116

[Close]

BLAST of Moc08g12740 vs. ExPASy TrEMBL
Match: A0A6J1D2A4 (uncharacterized protein LOC111016933 OS=Momordica charantia OX=3673 GN=LOC111016933 PE=4 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 2.0e-80
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   MMEKRRSANFAFVLLLCTTVIISAGVAAKAGDDHDNLSVEEEAGAARIEGEGRGRSWVEE 60
           MMEKRRSANFAFVLLLCTTVIISAGVAAKAGDDHDNLSVEEEAGAARIEGEGRGRSWVEE
Sbjct: 1   MMEKRRSANFAFVLLLCTTVIISAGVAAKAGDDHDNLSVEEEAGAARIEGEGRGRSWVEE 60

Query: 61  ALVDAISVFTVTSAAPPCATPHYWDRLRTWVLDPLLAYLFPPKIDFRPGKADDDEDGGGH 120
           ALVDAISVFTVTSAAPPCATPHYWDRLRTWVLDPLLAYLFPPKIDFRPGKADDDEDGGGH
Sbjct: 61  ALVDAISVFTVTSAAPPCATPHYWDRLRTWVLDPLLAYLFPPKIDFRPGKADDDEDGGGH 120

Query: 121 GNENVKEALTKSFDQGKQIVQDSAKAAADIAGEL 155
           GNENVKEALTKSFDQGKQIVQDSAKAAADIAGEL
Sbjct: 121 GNENVKEALTKSFDQGKQIVQDSAKAAADIAGEL 154

[Close]

BLAST of Moc08g12740 vs. ExPASy TrEMBL
Match: A0A0A0L904 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G642710 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 2.0e-11
Identity = 44/86 (51.16%), Postives = 61/86 (70.93%), Query Frame = 0


Query: 65  AISVFTVTSAAPPCATPHYWDRLRTWVLDPLLAYLFPPKIDFRPGKADDDEDGGG--HGN 124
           A ++++ TS   P     YW+ +R  V++    YLFPPKIDFRPGKA +D+ G    +GN
Sbjct: 33  ANNIYSETSTPNP--PNSYWEEVRK-VVNKAYTYLFPPKIDFRPGKAVEDDSGVSVKNGN 92

Query: 125 ENVKEALTKSFDQGKQIVQDSAKAAA 149
            NVKEA+TKSF++ K++V+DSAKAAA
Sbjct: 93  VNVKEAVTKSFEKTKEMVEDSAKAAA 115

[Close]

BLAST of Moc08g12740 vs. ExPASy TrEMBL
Match: A0A5A7VE77 (Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold606G00220 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 4.4e-11
Identity = 43/84 (51.19%), Postives = 60/84 (71.43%), Query Frame = 0


Query: 65  AISVFTVTSAAPPCATPHYWDRLRTWVLDPLLAYLFPPKIDFRPGKADDDEDGGGHGNEN 124
           A +V++ TS   P     YW+ +R  V++   +YLFPPKIDFRPGKA +D+ G    + N
Sbjct: 34  ANNVYSETSTPNP--PNSYWEEVRK-VVNKAYSYLFPPKIDFRPGKAVEDDSGLSVEDGN 93

Query: 125 VKEALTKSFDQGKQIVQDSAKAAA 149
           VKEA+TKSF++ K++V+DSAKAAA
Sbjct: 94  VKEAVTKSFEKTKEMVEDSAKAAA 114

[Close]

BLAST of Moc08g12740 vs. ExPASy TrEMBL
Match: A0A1S3CDE0 (uncharacterized protein LOC103499155 OS=Cucumis melo OX=3656 GN=LOC103499155 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 4.4e-11
Identity = 43/84 (51.19%), Postives = 60/84 (71.43%), Query Frame = 0


Query: 65  AISVFTVTSAAPPCATPHYWDRLRTWVLDPLLAYLFPPKIDFRPGKADDDEDGGGHGNEN 124
           A +V++ TS   P     YW+ +R  V++   +YLFPPKIDFRPGKA +D+ G    + N
Sbjct: 34  ANNVYSETSTPNP--PNSYWEEVRK-VVNKAYSYLFPPKIDFRPGKAVEDDSGLSVEDGN 93

Query: 125 VKEALTKSFDQGKQIVQDSAKAAA 149
           VKEA+TKSF++ K++V+DSAKAAA
Sbjct: 94  VKEAVTKSFEKTKEMVEDSAKAAA 114

[Close]

BLAST of Moc08g12740 vs. ExPASy TrEMBL
Match: A0A6J1G9K3 (uncharacterized protein LOC111452199 OS=Cucurbita moschata OX=3662 GN=LOC111452199 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 2.9e-10
Identity = 46/91 (50.55%), Postives = 62/91 (68.13%), Query Frame = 0


Query: 58  VEEALVDAISVFTVTSAAPPCATPHYWDRLRTWVLDPLLAYLFPPKIDFRPGKADDDEDG 117
           +EE +   IS  +  S+ PP +   YW+ +R  V++  +  LFPPKIDFRPGK    EDG
Sbjct: 18  IEETVGRVISA-SAASSPPPNS---YWEEVRK-VVNRAVTCLFPPKIDFRPGK--PVEDG 77

Query: 118 GGHGNENVKEALTKSFDQGKQIVQDSAKAAA 149
             +GNEN+KE++TKSF   KQ+V+DSAKAAA
Sbjct: 78  QVNGNENMKESITKSFHTTKQMVEDSAKAAA 101

[Close]

BLAST of Moc08g12740 vs. TAIR 10
Match: AT1G16850.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress; LOCATED IN: endomembrane system; EXPRESSED IN: leaf apex, leaf whorl, male gametophyte, flower, leaf; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, LP.10 ten leaves visible, petal differentiation and expansion stage, LP.08 eight leaves visible; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G64820.1); Has 24 Blast hits to 24 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 43.5 bits (101), Expect = 1.8e-04
Identity = 26/72 (36.11%), Postives = 42/72 (58.33%), Query Frame = 0


Query: 82  HYWDRLRTWVLDPLLAYLFPPKIDFRPGKADDDEDGGGHGNENVKEALTKSFDQGKQIVQ 141
           +YW ++R   LD   ++ FPP   F  GK D     G    EN+KEA T+SF+  K  V+
Sbjct: 60  NYWAKVRE-TLDRGQSHFFPPNTYF-TGKNDAPMGAG----ENMKEAATRSFEHSKATVE 119

Query: 142 DSAKAAADIAGE 154
           ++A++AA++  +
Sbjct: 120 EAARSAAEVVSD 125

[Close]

BLAST of Moc08g12740 vs. TAIR 10
Match: AT5G64820.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G16850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 43.5 bits (101), Expect = 1.8e-04
Identity = 24/76 (31.58%), Postives = 44/76 (57.89%), Query Frame = 0


Query: 81  PHYWDRLRTWVLDPLLAYLFPPKIDFRPG--KADDDEDGGGHGNENVKEALTKSFDQGKQ 140
           P  W+ ++   +  +   L+PP +DFR    K++ +E+      E V+EA T+S +  K+
Sbjct: 57  PSSWELIQ-GAMQKIQMKLYPPNLDFRSNSDKSNIEEEDKA---EKVREAATRSLEVSKE 116

Query: 141 IVQDSAKAAADIAGEL 155
            +++SAK A D+ GE+
Sbjct: 117 AIEESAKLAGDVVGEV 128

The following BLAST results are available for this feature:

BLAST of Moc08g12740 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022148210.1	4.2e-80	100.00	uncharacterized protein LOC111016933 [Momordica charantia]	[more]
XP_031737573.1	4.1e-11	51.16	uncharacterized protein LOC101222094 [Cucumis sativus] >KGN58430.1 hypothetical ...	[more]
XP_008460283.1	9.1e-11	51.19	PREDICTED: uncharacterized protein LOC103499155 [Cucumis melo] >KAA0065584.1 put...	[more]
XP_022948557.1	5.9e-10	50.55	uncharacterized protein LOC111452199 [Cucurbita moschata]	[more]
KAG6571254.1	5.9e-10	37.76	hypothetical protein SDJN03_30169, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Moc08g12740 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc08g12740 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D2A4	2.0e-80	100.00	uncharacterized protein LOC111016933 OS=Momordica charantia OX=3673 GN=LOC111016...	[more]
A0A0A0L904	2.0e-11	51.16	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G642710 PE=4 SV=1	[more]
A0A5A7VE77	4.4e-11	51.19	Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3CDE0	4.4e-11	51.19	uncharacterized protein LOC103499155 OS=Cucumis melo OX=3656 GN=LOC103499155 PE=...	[more]
A0A6J1G9K3	2.9e-10	50.55	uncharacterized protein LOC111452199 OS=Cucurbita moschata OX=3662 GN=LOC1114521...	[more]

BLAST of Moc08g12740 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G16850.1	1.8e-04	36.11	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response...	[more]
AT5G64820.1	1.8e-04	31.58	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 109..133
None	No IPR available	PANTHER	PTHR35463:SF11	BNAC05G12860D PROTEIN	coord: 1..153
None	No IPR available	PANTHER	PTHR35463	TRANSMEMBRANE PROTEIN	coord: 1..153

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc08g12740.1	Moc08g12740.1	mRNA