Moc08g12420 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc08g12420
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionprotein TsetseEP-like
Locationchr8: 9252003 .. 9254580 (-)
RNA-Seq ExpressionMoc08g12420
SyntenyMoc08g12420
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCGTTTCCTTCCCTAGTCAATGTGAGACTTTGTTTGCAATCACCTTACAAACCCAAAAGAAATCCAGCAGTTTGAGTCAGCCTTTTGGACCTTCGGCAAATGAGCTCGATAGTCGTTGTCCGCTCAAAGTTGTACCTCTCCCGATCGAGGAATCGATTGACAAGAATCTCATCGGCTCTGGCAGAAATCGCCTTATGCCTCGTCTGCTTCGCCAAACAGAGAGAGAACGAGGCCTTAACTCCAACCTTGAGTGTGAGTGTATGTCGTTGGATCTCTGAGAATTTTGACCACACATTTTGATGGGAAAAAATCTTCTACTTCTACCATGAGAATAATAAAAAAAAATAACCGAGAAATTTAAAAAAATCAATAAAATAAAGAAATATAAGAATTTTGATAAGAGAGTATTTTGTGGTATAAGCTATGTAATATTGGTGTGCAAATGTGAGGGTCCTTGATAAAATAGCAAGAAAAGAATAGAATTTAGCAAACCAGGAATCTGAGTTGTTTAGAATTCTCAATATACTTGTTTTGAATGGAGTTGAGCTGATGATATGGTTATTTTGACGTTAATTGCTTAATTAAGGACGTTAAGGGATGTGAATCCCGTAGCGGAAGCAATAGGAAGCGTTCTTGAATTTCTTTTGAAATTAAAAACACAAAAAAATATAAAACAAGGAAGAATGTTGGATTTTACTTTTGAAGATTCTTGTTCGTGAAATCCCAATGAGATAACACCACTTGATCTGCCTTGCTAGGTCTCTCGGTCGAGAATCCAGATTGTGGGATCCAATTACAAAGGATTGAGAGGGTAAGAGAGAGATTTTAAGCCTTTAGCATCCTTTAGGTTTAGTTTAATGTTATATTTATGGAAGAGAAAATCCTAAGACCCATATTATCTTTTCGATATAGGATATCTTGAATCGAGGAGAAATCCCAAGGCATCACGATATTTTCTTCTTAACTTTAATTAATAATAAATTAATTAATTAAATCAATTAATAATTTAATTAATAATTATTAATCTAATTAATAATTAATTAATTACCATCCAAATATTAAATAAATAATTAATTATTAATTATTTAACTTTTAATTAAATTAAAACTATATATTTGAATCATATTCAAATGCATCTCTCTTGTATAACGTGTAGTTTTAATATGAATCAAATTCATATTAATTATTTGAATCCTATTCAAATATTTCTCTCATAATATATAGTCTAATTATTGAATATTTATTAAAAAATAAATTATACATATAATGTATCATATATTCCCTGATATATAATTTTGATCCTCGTTTTACCCGTTGTGAGCTAGTAAGGGGACCTAATAGACCTACAGATCAGAAGCTCCAACGATACGGAATTAATCAGTCAAACTCATTAATTGAGTTAATCAACATTCGTTAACGGTGGGTCACTTCACTAAAGATCCGCAGTTGCACTCTTCTCACTGCAGAATATTTTCGTGTCCACGGATGTACGACCATTAACGGTAAGTCAATCCTTCACGAGTCTTAACAGACAAGAGTCCGTAACTCACTCAGGATTGAGATTGAGTTGTCTGGTCATCCTATTGAAATATTAATCTATTAGCCAACGGTGTTACAGCTAAAGATTAATTATTTCGTGGTCCGGTCTTATACAAACTCATCGTATATGATACCCTCACTCGTATGTCTCCACACGAACGACCTGGATCCAATCATTTGTAACTATTACAAAGTGAGTCGTATCCACAGTGTTACTAGGATAAGGTACCAACCTTACCCATATACCATAGAGCCTTTAGGTTATTACTGGAACAGTATTCACCTTTATATCAAATATATATTGTATACATATACACTGTATATCAAATATATACGTTGTATATTAAATATATACAGTATATCTATTATATACTGTTCCAGTTACATGACATAACCTCGGATGTTAGTTTATTGGATTTGGGTTAATGCAATTCTAAATGAAACATCAATAACAAGTTTATTGAATAAATATTTGTTTTATGTTTACAAACCACGAGTTTAAGGCATAAAACCCAACACTCTTCTCCAAAGAAGAAAAGACCAGCAAAAAGGAGGCAAAAACCTGCCAAAGTAAAGCTGCCTCCAGAACCCATTGTAGAGGAAGAGCGAGTAACCCCAGAGGAAGAAATCCTCACAAAAGAGCAGCCTGTTGTAAACGAGGAAGCACTGCTTGAAGAAAGGAACGAAGACGAAGCTCCGACCTTCTCTCCTGAAACACGGCAGGTGGTGGAGGAGTTTGTGTGTACCCTATCTGAGAATGAGCGGATATTAATGGGTTTTGACAAGGTGGATGAGCCAAGTGGGGCTAACAATACATAAGGAATTGAGGAAGAGAATGAGGAGTTCCAGAGCGAGCAAGAGGAAGAAGCAGCCCCAGTGCCTACAAGAAAATCACCTAGGAAGAGAAAGGCTTTGTCCAAACAGCCAGCTGAAAAGAAAAAGAAGGTAAAAGAGAAAGCTGAGAAGGAAAAGAAGAAAGAGGGTGCCCAGGACAGTAGAAAGGGAAAAGCGAAGATTGTTGTAGAAGAGCCATAG

mRNA sequence

ATGATCGTTTCCTTCCCTAGTCAATGTGAGACTTTGTTTGCAATCACCTTACAAACCCAAAAGAAATCCAGCAGTTTGAGTCAGCCTTTTGGACCTTCGGCAAATGAGCTCGATAGTCGTTGTCCGCTCAAAGTTGTACCTCTCCCGATCGAGGAATCGATTGACAAGAATCTCATCGGCTCTGGCAGAAATCGCCTTATGCCTCGTCTGCTTCGCCAAACAGAGAGAGAACGAGGCCTTAACTCCAACCTTGAGTGTGAGTGTCTCTCGGTCGAGAATCCAGATTGTGGGATCCAATTACAAAGGATTGAGAGGAAGAAAAGACCAGCAAAAAGGAGGCAAAAACCTGCCAAAGTAAAGCTGCCTCCAGAACCCATTGTAGAGGAAGAGCGAGTAACCCCAGAGGAAGAAATCCTCACAAAAGAGCAGCCTGTTGTAAACGAGGAAGCACTGCTTGAAGAAAGGAACGAAGACGAAGCTCCGACCTTCTCTCCTGAAACACGGCAGGAAGAGAATGAGGAGTTCCAGAGCGAGCAAGAGGAAGAAGCAGCCCCAGTGCCTACAAGAAAATCACCTAGGAAGAGAAAGGCTTTGTCCAAACAGCCAGCTGAAAAGAAAAAGAAGGTAAAAGAGAAAGCTGAGAAGGAAAAGAAGAAAGAGGGTGCCCAGGACAGTAGAAAGGGAAAAGCGAAGATTGTTGTAGAAGAGCCATAG

Coding sequence (CDS)

ATGATCGTTTCCTTCCCTAGTCAATGTGAGACTTTGTTTGCAATCACCTTACAAACCCAAAAGAAATCCAGCAGTTTGAGTCAGCCTTTTGGACCTTCGGCAAATGAGCTCGATAGTCGTTGTCCGCTCAAAGTTGTACCTCTCCCGATCGAGGAATCGATTGACAAGAATCTCATCGGCTCTGGCAGAAATCGCCTTATGCCTCGTCTGCTTCGCCAAACAGAGAGAGAACGAGGCCTTAACTCCAACCTTGAGTGTGAGTGTCTCTCGGTCGAGAATCCAGATTGTGGGATCCAATTACAAAGGATTGAGAGGAAGAAAAGACCAGCAAAAAGGAGGCAAAAACCTGCCAAAGTAAAGCTGCCTCCAGAACCCATTGTAGAGGAAGAGCGAGTAACCCCAGAGGAAGAAATCCTCACAAAAGAGCAGCCTGTTGTAAACGAGGAAGCACTGCTTGAAGAAAGGAACGAAGACGAAGCTCCGACCTTCTCTCCTGAAACACGGCAGGAAGAGAATGAGGAGTTCCAGAGCGAGCAAGAGGAAGAAGCAGCCCCAGTGCCTACAAGAAAATCACCTAGGAAGAGAAAGGCTTTGTCCAAACAGCCAGCTGAAAAGAAAAAGAAGGTAAAAGAGAAAGCTGAGAAGGAAAAGAAGAAAGAGGGTGCCCAGGACAGTAGAAAGGGAAAAGCGAAGATTGTTGTAGAAGAGCCATAG

Protein sequence

MIVSFPSQCETLFAITLQTQKKSSSLSQPFGPSANELDSRCPLKVVPLPIEESIDKNLIGSGRNRLMPRLLRQTERERGLNSNLECECLSVENPDCGIQLQRIERKKRPAKRRQKPAKVKLPPEPIVEEERVTPEEEILTKEQPVVNEEALLEERNEDEAPTFSPETRQEENEEFQSEQEEEAAPVPTRKSPRKRKALSKQPAEKKKKVKEKAEKEKKKEGAQDSRKGKAKIVVEEP
Homology
[Close]
BLAST of Moc08g12420 vs. NCBI nr
Match: XP_022158487.1 (protein TsetseEP-like [Momordica charantia])

HSP 1 Score: 79.7 bits (195), Expect = 3.7e-11
Identity = 77/176 (43.75%), Postives = 93/176 (52.84%), Query Frame = 0 

Query: 99  QLQRIE-----RKKRPAKRRQKPAKVKLPPEPIVEEERVTPEEEILTKEQPVVNEEALLE 158
           QLQR E     ++K+  KR +KP K K  P+P  E  RV+P+EEI  +E+PV NEE   E
Sbjct: 48  QLQREEVPSPQKEKKSTKRGRKPTKAKPLPKPTEEXNRVSPDEEIAKEERPVDNEEVQPE 107

Query: 159 ERNEDEAPTFSPETRQ------------------------------------EENEEFQS 218
           ERNEDE P FSPET Q                                    EE ++ QS
Sbjct: 108 ERNEDEVPAFSPETVQVVEDFVWTLSENERDLMGFREWGFNKGESSGAKVVKEEEDKVQS 167

Query: 219 EQEEE-AAPVPTRKSPRKRKALSKQPAEKKKKVKEKAEKEKKKEGAQDSRKGKAKI 233
           ++EEE A    TRKSPRKRK   KQ A KKKK K +A KEK KE +   RKGK K+
Sbjct: 168 DKEEEKAISAATRKSPRKRKTSPKQTAGKKKKAKGEAAKEKHKEDSPAKRKGKEKV 223

[Close]
BLAST of Moc08g12420 vs. ExPASy TrEMBL
Match: A0A6J1DXC9 (protein TsetseEP-like OS=Momordica charantia OX=3673 GN=LOC111024967 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 1.8e-11
Identity = 77/176 (43.75%), Postives = 93/176 (52.84%), Query Frame = 0 

Query: 99  QLQRIE-----RKKRPAKRRQKPAKVKLPPEPIVEEERVTPEEEILTKEQPVVNEEALLE 158
           QLQR E     ++K+  KR +KP K K  P+P  E  RV+P+EEI  +E+PV NEE   E
Sbjct: 48  QLQREEVPSPQKEKKSTKRGRKPTKAKPLPKPTEEXNRVSPDEEIAKEERPVDNEEVQPE 107

Query: 159 ERNEDEAPTFSPETRQ------------------------------------EENEEFQS 218
           ERNEDE P FSPET Q                                    EE ++ QS
Sbjct: 108 ERNEDEVPAFSPETVQVVEDFVWTLSENERDLMGFREWGFNKGESSGAKVVKEEEDKVQS 167

Query: 219 EQEEE-AAPVPTRKSPRKRKALSKQPAEKKKKVKEKAEKEKKKEGAQDSRKGKAKI 233
           ++EEE A    TRKSPRKRK   KQ A KKKK K +A KEK KE +   RKGK K+
Sbjct: 168 DKEEEKAISAATRKSPRKRKTSPKQTAGKKKKAKGEAAKEKHKEDSPAKRKGKEKV 223

The following BLAST results are available for this feature:
BLAST of Moc08g12420 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022158487.13.7e-1143.75protein TsetseEP-like [Momordica charantia][more]
BLAST of Moc08g12420 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc08g12420 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DXC91.8e-1143.75protein TsetseEP-like OS=Momordica charantia OX=3673 GN=LOC111024967 PE=4 SV=1[more]
BLAST of Moc08g12420 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 203..223
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 106..237
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 117..172
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 204..237

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc08g12420.1Moc08g12420.1mRNA