Moc08g08320 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc08g08320
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Sec-independent protein translocase protein TATC
Location	chr8: 6175907 .. 6176503 (+)
RNA-Seq Expression	Moc08g08320
Synteny	Moc08g08320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGCGGTTCTGATTCCATTTTCTGCTGAGCAATCTCGCAGTATGAAAACCCAAAACTTCCCTCCGATCACCGTCCACCGCGGCGGTCTTCTCAACTTCCCTCCGCCGGGCGTCGCGTTTTACTGCCGCCGCCAGCAGCCGCCTCTCCTCCCTTTTCCCCACCGTCCATTGCCCCCGCCGCCGTGCAGGCAAAGGGGTACCCCCAAATCCAGAGACCAATCTCTTACCCCAAAGAAATCAAAATCAAAAACAAAATCAACTAAACGAAGTAGAGAACCGCCAGCGGCGAAATCGGGGGCGGAAATTGTGATCGTTGATTCGACGAATCGGCTGGGGCCGGAGCCGAGCCATGTTCCTAAAGATTTATGGAAAGTTTTAGGATTAGGATGCTCCGGTGAGCGGCGTTTGGGGGGGACGACGGCCGCGGCGGCGGAGATGGAGTTTTCGGGGTCGGCGTTCAGCGTTTCGCCGCCTCCGAGCAGTGTGCCGCTTCCCAAGTTCTCTGTGAGGCGGGAGGTGGGCTGTAATGTGGAGGCTGCCGGAGTAGATGCCGGAGCCACCGACAATCTCCGGCGACTTTTGCGCCTCCGATGA

mRNA sequence

ATGGAGGCGGTTCTGATTCCATTTTCTGCTGAGCAATCTCGCAGTATGAAAACCCAAAACTTCCCTCCGATCACCGTCCACCGCGGCGGTCTTCTCAACTTCCCTCCGCCGGGCGTCGCGTTTTACTGCCGCCGCCAGCAGCCGCCTCTCCTCCCTTTTCCCCACCGTCCATTGCCCCCGCCGCCGTGCAGGCAAAGGGGTACCCCCAAATCCAGAGACCAATCTCTTACCCCAAAGAAATCAAAATCAAAAACAAAATCAACTAAACGAAGTAGAGAACCGCCAGCGGCGAAATCGGGGGCGGAAATTGTGATCGTTGATTCGACGAATCGGCTGGGGCCGGAGCCGAGCCATGTTCCTAAAGATTTATGGAAAGTTTTAGGATTAGGATGCTCCGGTGAGCGGCGTTTGGGGGGGACGACGGCCGCGGCGGCGGAGATGGAGTTTTCGGGGTCGGCGTTCAGCGTTTCGCCGCCTCCGAGCAGTGTGCCGCTTCCCAAGTTCTCTGTGAGGCGGGAGGTGGGCTGTAATGTGGAGGCTGCCGGAGTAGATGCCGGAGCCACCGACAATCTCCGGCGACTTTTGCGCCTCCGATGA

Coding sequence (CDS)

ATGGAGGCGGTTCTGATTCCATTTTCTGCTGAGCAATCTCGCAGTATGAAAACCCAAAACTTCCCTCCGATCACCGTCCACCGCGGCGGTCTTCTCAACTTCCCTCCGCCGGGCGTCGCGTTTTACTGCCGCCGCCAGCAGCCGCCTCTCCTCCCTTTTCCCCACCGTCCATTGCCCCCGCCGCCGTGCAGGCAAAGGGGTACCCCCAAATCCAGAGACCAATCTCTTACCCCAAAGAAATCAAAATCAAAAACAAAATCAACTAAACGAAGTAGAGAACCGCCAGCGGCGAAATCGGGGGCGGAAATTGTGATCGTTGATTCGACGAATCGGCTGGGGCCGGAGCCGAGCCATGTTCCTAAAGATTTATGGAAAGTTTTAGGATTAGGATGCTCCGGTGAGCGGCGTTTGGGGGGGACGACGGCCGCGGCGGCGGAGATGGAGTTTTCGGGGTCGGCGTTCAGCGTTTCGCCGCCTCCGAGCAGTGTGCCGCTTCCCAAGTTCTCTGTGAGGCGGGAGGTGGGCTGTAATGTGGAGGCTGCCGGAGTAGATGCCGGAGCCACCGACAATCTCCGGCGACTTTTGCGCCTCCGATGA

Protein sequence

MEAVLIPFSAEQSRSMKTQNFPPITVHRGGLLNFPPPGVAFYCRRQQPPLLPFPHRPLPPPPCRQRGTPKSRDQSLTPKKSKSKTKSTKRSREPPAAKSGAEIVIVDSTNRLGPEPSHVPKDLWKVLGLGCSGERRLGGTTAAAAEMEFSGSAFSVSPPPSSVPLPKFSVRREVGCNVEAAGVDAGATDNLRRLLRLR

Homology

[Close]

BLAST of Moc08g08320 vs. NCBI nr
Match: XP_022997633.1 (uncharacterized protein LOC111492508 [Cucurbita maxima])

HSP 1 Score: 254.6 bits (649), Expect = 7.0e-64
Identity = 147/206 (71.36%), Postives = 158/206 (76.70%), Query Frame = 0


Query: 1   MEAVLIPFSAEQSRSMKTQNFPPITVHRGGLLNFPPPGVAFYCRR--QQPPLLPFPHRPL 60
           MEAVLIPFSAE+SRS+K++NF P TVH  G+LN PPP V  Y  R  QQPPLLP P RP 
Sbjct: 1   MEAVLIPFSAERSRSLKSRNFSPATVH-DGVLNIPPPAVPNYSHRHHQQPPLLPLPGRPF 60

Query: 61  P------PPPCRQRGTPKSRDQSLTPKKSKSKTKSTKRSREPPAAKSGAEIVIVDSTNRL 120
           P      PP CR +GT KSRDQSLTPKKS    K  KRSR PPA KS AE +IVDSTNRL
Sbjct: 61  PPTAVGVPPSCRPKGT-KSRDQSLTPKKS----KPIKRSRGPPALKSTAEFMIVDSTNRL 120

Query: 121 GPEPSHVPKDLWKVLGLGCSGERRLGGTTAAAAEMEFSGSAFSVSPPPSSVPLPKFSVRR 180
           GPEPSHVPKDLW+VLGL  S   R GG    + E EFSGSAF VSPPPSSVPLPKF++RR
Sbjct: 121 GPEPSHVPKDLWRVLGLRSSAPPREGG---RSFETEFSGSAFGVSPPPSSVPLPKFTLRR 180

Query: 181 EVGCNVEAAGVDAGATDNLRRLLRLR 199
           EV CNVEAAGVDAGATDNLRRLLRLR
Sbjct: 181 EVSCNVEAAGVDAGATDNLRRLLRLR 197

[Close]

BLAST of Moc08g08320 vs. NCBI nr
Match: XP_023546813.1 (proline-rich receptor-like protein kinase PERK2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 253.1 bits (645), Expect = 2.0e-63
Identity = 147/206 (71.36%), Postives = 156/206 (75.73%), Query Frame = 0


Query: 1   MEAVLIPFSAEQSRSMKTQNFPPITVHRGGLLNFPPPGVAFYCRR--QQPPLLPFPHRPL 60
           MEAVLIPFSAE+SRS+K+ NF P TVH  GLLN PPP V  Y  R  QQPPLLP P RP 
Sbjct: 1   MEAVLIPFSAERSRSLKSCNFSPATVH-DGLLNVPPPAVPNYSHRHHQQPPLLPLPRRPF 60

Query: 61  P------PPPCRQRGTPKSRDQSLTPKKSKSKTKSTKRSREPPAAKSGAEIVIVDSTNRL 120
           P      PP CR +GT KSRDQSLTPKKS    K  KRSR PPA KS AE +IVDSTNRL
Sbjct: 61  PPTAVGAPPSCRPKGT-KSRDQSLTPKKS----KPIKRSRGPPALKSTAEFMIVDSTNRL 120

Query: 121 GPEPSHVPKDLWKVLGLGCSGERRLGGTTAAAAEMEFSGSAFSVSPPPSSVPLPKFSVRR 180
           GPEPSHVPKDLW+VLGL  S   R GG    + E EFSGS F VSPPPSSVPLPKF++RR
Sbjct: 121 GPEPSHVPKDLWRVLGLRSSAPPREGG---RSFETEFSGSGFGVSPPPSSVPLPKFNLRR 180

Query: 181 EVGCNVEAAGVDAGATDNLRRLLRLR 199
           EV CNVEAAGVDAGATDNLRRLLRLR
Sbjct: 181 EVSCNVEAAGVDAGATDNLRRLLRLR 197

[Close]

BLAST of Moc08g08320 vs. NCBI nr
Match: XP_022962625.1 (uncharacterized protein LOC111463019 [Cucurbita moschata])

HSP 1 Score: 251.5 bits (641), Expect = 5.9e-63
Identity = 146/206 (70.87%), Postives = 156/206 (75.73%), Query Frame = 0


Query: 1   MEAVLIPFSAEQSRSMKTQNFPPITVHRGGLLNFPPPGVAFYCR--RQQPPLLPFPHRPL 60
           ME VLIPFSAE+SRS+K++NF P TVH  GLLN PPP V  Y    RQQPPLLP P RP 
Sbjct: 1   MEGVLIPFSAERSRSLKSRNFFPATVH-DGLLNVPPPAVPNYSHRLRQQPPLLPLPRRPF 60

Query: 61  P------PPPCRQRGTPKSRDQSLTPKKSKSKTKSTKRSREPPAAKSGAEIVIVDSTNRL 120
           P      PP CR +GT KSRDQSLTPKKS    K  KRSR PPA KS AE +IVDSTNRL
Sbjct: 61  PPTAVGAPPSCRPKGT-KSRDQSLTPKKS----KPIKRSRGPPALKSTAEFMIVDSTNRL 120

Query: 121 GPEPSHVPKDLWKVLGLGCSGERRLGGTTAAAAEMEFSGSAFSVSPPPSSVPLPKFSVRR 180
           GPEPSHVPKDLW+VLGL  S   R GG      E EFSGSAF VSPPPSSVPLPKF++RR
Sbjct: 121 GPEPSHVPKDLWRVLGLRSSAPPREGG---RRFETEFSGSAFGVSPPPSSVPLPKFTLRR 180

Query: 181 EVGCNVEAAGVDAGATDNLRRLLRLR 199
           E+ CNVEAAGVDAGATDNLRRLLRLR
Sbjct: 181 EMSCNVEAAGVDAGATDNLRRLLRLR 197

[Close]

BLAST of Moc08g08320 vs. NCBI nr
Match: KAG7029446.1 (hypothetical protein SDJN02_07785, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 250.8 bits (639), Expect = 1.0e-62
Identity = 146/206 (70.87%), Postives = 155/206 (75.24%), Query Frame = 0


Query: 1   MEAVLIPFSAEQSRSMKTQNFPPITVHRGGLLNFPPPGVAFYCR--RQQPPLLPFPHRPL 60
           ME VLIPFSAE+SRS+K++NF P TVH  GLLN PPP V  Y    RQQPPLLP P RP 
Sbjct: 1   MEGVLIPFSAERSRSLKSRNFFPATVH-DGLLNVPPPAVPNYSHRIRQQPPLLPLPRRPF 60

Query: 61  PP------PPCRQRGTPKSRDQSLTPKKSKSKTKSTKRSREPPAAKSGAEIVIVDSTNRL 120
           PP      P CR +GT KSRDQSLTPKKS    K  KRSR PPA KS AE +IVDSTNRL
Sbjct: 61  PPTAVGPLPSCRPKGT-KSRDQSLTPKKS----KPIKRSRGPPALKSTAEFMIVDSTNRL 120

Query: 121 GPEPSHVPKDLWKVLGLGCSGERRLGGTTAAAAEMEFSGSAFSVSPPPSSVPLPKFSVRR 180
           GPEPSHVPKDLW+VLGL  S   R GG      E EFSGSAF VSPPPS VPLPKF++RR
Sbjct: 121 GPEPSHVPKDLWRVLGLRSSAPPREGG---RRFETEFSGSAFGVSPPPSCVPLPKFTLRR 180

Query: 181 EVGCNVEAAGVDAGATDNLRRLLRLR 199
           EV CNVEAAGVDAGATDNLRRLLRLR
Sbjct: 181 EVSCNVEAAGVDAGATDNLRRLLRLR 197

[Close]

BLAST of Moc08g08320 vs. NCBI nr
Match: KAG6598509.1 (hypothetical protein SDJN03_08287, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 250.8 bits (639), Expect = 1.0e-62
Identity = 146/206 (70.87%), Postives = 155/206 (75.24%), Query Frame = 0


Query: 1   MEAVLIPFSAEQSRSMKTQNFPPITVHRGGLLNFPPPGVAFYCR--RQQPPLLPFPHRPL 60
           ME VLIPFSAE+SRS+K++NF P TVH  GLLN PPP V  Y    RQQPPLLP P RP 
Sbjct: 1   MEGVLIPFSAERSRSLKSRNFFPATVH-DGLLNVPPPAVPNYSHRIRQQPPLLPLPRRPF 60

Query: 61  ------PPPPCRQRGTPKSRDQSLTPKKSKSKTKSTKRSREPPAAKSGAEIVIVDSTNRL 120
                 PPP CR +GT KSRDQSLTPKKS    K  KRSR PPA KS AE +IVDSTNRL
Sbjct: 61  PPTAVGPPPSCRPKGT-KSRDQSLTPKKS----KPIKRSRGPPALKSTAEFMIVDSTNRL 120

Query: 121 GPEPSHVPKDLWKVLGLGCSGERRLGGTTAAAAEMEFSGSAFSVSPPPSSVPLPKFSVRR 180
           GPEPSHVPKDLW+VLGL  S   R GG      E EFSGSAF VSPPPS VPLPKF++RR
Sbjct: 121 GPEPSHVPKDLWRVLGLRSSAPPREGG---RRFETEFSGSAFGVSPPPSCVPLPKFTLRR 180

Query: 181 EVGCNVEAAGVDAGATDNLRRLLRLR 199
           EV CNVEAAGVDAGATDNLRRLLRLR
Sbjct: 181 EVSCNVEAAGVDAGATDNLRRLLRLR 197

[Close]

BLAST of Moc08g08320 vs. ExPASy TrEMBL
Match: A0A6J1KEH8 (uncharacterized protein LOC111492508 OS=Cucurbita maxima OX=3661 GN=LOC111492508 PE=4 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 3.4e-64
Identity = 147/206 (71.36%), Postives = 158/206 (76.70%), Query Frame = 0


Query: 1   MEAVLIPFSAEQSRSMKTQNFPPITVHRGGLLNFPPPGVAFYCRR--QQPPLLPFPHRPL 60
           MEAVLIPFSAE+SRS+K++NF P TVH  G+LN PPP V  Y  R  QQPPLLP P RP 
Sbjct: 1   MEAVLIPFSAERSRSLKSRNFSPATVH-DGVLNIPPPAVPNYSHRHHQQPPLLPLPGRPF 60

Query: 61  P------PPPCRQRGTPKSRDQSLTPKKSKSKTKSTKRSREPPAAKSGAEIVIVDSTNRL 120
           P      PP CR +GT KSRDQSLTPKKS    K  KRSR PPA KS AE +IVDSTNRL
Sbjct: 61  PPTAVGVPPSCRPKGT-KSRDQSLTPKKS----KPIKRSRGPPALKSTAEFMIVDSTNRL 120

Query: 121 GPEPSHVPKDLWKVLGLGCSGERRLGGTTAAAAEMEFSGSAFSVSPPPSSVPLPKFSVRR 180
           GPEPSHVPKDLW+VLGL  S   R GG    + E EFSGSAF VSPPPSSVPLPKF++RR
Sbjct: 121 GPEPSHVPKDLWRVLGLRSSAPPREGG---RSFETEFSGSAFGVSPPPSSVPLPKFTLRR 180

Query: 181 EVGCNVEAAGVDAGATDNLRRLLRLR 199
           EV CNVEAAGVDAGATDNLRRLLRLR
Sbjct: 181 EVSCNVEAAGVDAGATDNLRRLLRLR 197

[Close]

BLAST of Moc08g08320 vs. ExPASy TrEMBL
Match: A0A6J1HFM4 (uncharacterized protein LOC111463019 OS=Cucurbita moschata OX=3662 GN=LOC111463019 PE=4 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 2.9e-63
Identity = 146/206 (70.87%), Postives = 156/206 (75.73%), Query Frame = 0


Query: 1   MEAVLIPFSAEQSRSMKTQNFPPITVHRGGLLNFPPPGVAFYCR--RQQPPLLPFPHRPL 60
           ME VLIPFSAE+SRS+K++NF P TVH  GLLN PPP V  Y    RQQPPLLP P RP 
Sbjct: 1   MEGVLIPFSAERSRSLKSRNFFPATVH-DGLLNVPPPAVPNYSHRLRQQPPLLPLPRRPF 60

Query: 61  P------PPPCRQRGTPKSRDQSLTPKKSKSKTKSTKRSREPPAAKSGAEIVIVDSTNRL 120
           P      PP CR +GT KSRDQSLTPKKS    K  KRSR PPA KS AE +IVDSTNRL
Sbjct: 61  PPTAVGAPPSCRPKGT-KSRDQSLTPKKS----KPIKRSRGPPALKSTAEFMIVDSTNRL 120

Query: 121 GPEPSHVPKDLWKVLGLGCSGERRLGGTTAAAAEMEFSGSAFSVSPPPSSVPLPKFSVRR 180
           GPEPSHVPKDLW+VLGL  S   R GG      E EFSGSAF VSPPPSSVPLPKF++RR
Sbjct: 121 GPEPSHVPKDLWRVLGLRSSAPPREGG---RRFETEFSGSAFGVSPPPSSVPLPKFTLRR 180

Query: 181 EVGCNVEAAGVDAGATDNLRRLLRLR 199
           E+ CNVEAAGVDAGATDNLRRLLRLR
Sbjct: 181 EMSCNVEAAGVDAGATDNLRRLLRLR 197

[Close]

BLAST of Moc08g08320 vs. ExPASy TrEMBL
Match: A0A5A7VG22 (Sec-independent protein translocase protein TATC OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G001470 PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 6.4e-55
Identity = 138/208 (66.35%), Postives = 150/208 (72.12%), Query Frame = 0


Query: 1   MEAVLIPFSAEQSRSMKTQNFPPITVHRGGLLNFPPPGVAFYCRR--QQPPLLPFPHRPL 60
           ME VLIPFSA+QSRS   QN  P TVH  GLLNFP  G+ +  RR  QQPPLLP P RPL
Sbjct: 1   MEVVLIPFSADQSRSFNPQNLSPATVH-AGLLNFPLRGIPYNGRRHHQQPPLLPLPRRPL 60

Query: 61  PPPPC------RQRGTPKSRDQSLTPKKSKSKTKSTKRSREPPAAKSGAEIVIVDSTNRL 120
           PP         RQ+   K RDQSL PKKS    K  KRSR PPAAKS  E+VI+DSTNRL
Sbjct: 61  PPSETGATSFFRQK-CVKFRDQSLNPKKS----KPIKRSRGPPAAKSTVELVIIDSTNRL 120

Query: 121 GPEPSHVPKDLWKVLGLGCSGER-RLGGTTAAAAEMEFSGSAFSVSPPPSSVPLPKFSVR 180
           GPEP HVPKDLW+VLGL  S    +   +   AAE+EFSGSA S SPPPSSVPLPKFS+R
Sbjct: 121 GPEPCHVPKDLWRVLGLRPSAPMCKSTRSWETAAEIEFSGSACSQSPPPSSVPLPKFSLR 180

Query: 181 RE-VGCNVEAAGVDAGATDNLRRLLRLR 199
           R+ VGCNVE AGVDAGATDNLRRLLRLR
Sbjct: 181 RKVVGCNVEGAGVDAGATDNLRRLLRLR 202

[Close]

BLAST of Moc08g08320 vs. ExPASy TrEMBL
Match: A0A0A0LN70 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G345930 PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 8.4e-55
Identity = 137/216 (63.43%), Postives = 152/216 (70.37%), Query Frame = 0


Query: 1   MEAVLIPFSAEQSRSMKTQNFPPITVHRGGLLNFPPPGVAF-YCRR-QQPPLLPFPHRPL 60
           ME V IPFSA+QSR    QNF P  VH GG LNFP PG+++  CR+ QQPPLLP P RPL
Sbjct: 1   MEVVFIPFSADQSRGFNPQNFSPANVH-GGFLNFPLPGISYNSCRQHQQPPLLPLPRRPL 60

Query: 61  PP----------PPCRQRGTPKSRDQSLTPKKSKSKTKSTKRSREPPAAKSGAEIVIVDS 120
           PP          P C +      RDQSLTPKKS    K  KRSR PPAAKS  E+VIVDS
Sbjct: 61  PPSEIGATVSSRPKCME-----FRDQSLTPKKS----KPIKRSRGPPAAKSTVELVIVDS 120

Query: 121 TNRLGPEPSHVPKDLWKVLGLG-----CSGERRLGGTTAAAAEMEFSGSAFSVSPPPSSV 180
           TNRLGPEPSHVPKDL  +LGL      C   R    +   AAE+EFSGSA+S SPPPSSV
Sbjct: 121 TNRLGPEPSHVPKDLLTLLGLRPSVPLCESTR----SWETAAEIEFSGSAYSQSPPPSSV 180

Query: 181 PLPKFSVRRE-VGCNVEAAGVDAGATDNLRRLLRLR 199
           PLPKFS+RR+ VGCNVEA+GVDAGATDNLRRLLR+R
Sbjct: 181 PLPKFSLRRKVVGCNVEASGVDAGATDNLRRLLRIR 202

[Close]

BLAST of Moc08g08320 vs. ExPASy TrEMBL
Match: A0A6J1KQN3 (uncharacterized protein LOC111496332 OS=Cucurbita maxima OX=3661 GN=LOC111496332 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 4.6e-37
Identity = 116/217 (53.46%), Postives = 127/217 (58.53%), Query Frame = 0


Query: 1   MEAVLIPFSAEQSRSMKTQNFPPITVHRGGLLNFPPPGVAFYC----RRQQPPLLPFPHR 60
           MEAVLIP            NF P             P V FY      R+QPP  P P R
Sbjct: 1   MEAVLIP-----------HNFSPAA-----------PAVTFYSHRRRHRRQPPRFPLPRR 60

Query: 61  PLPP------PPCRQRGTPKSRDQSLTPKKSKSKTKSTKRSREPPAAKSGAEIVIVDSTN 120
             PP      P C  +G  + RDQSL PKKS    KS KR RE P   + AE +IVDSTN
Sbjct: 61  SFPPSEAEAQPSCGPKGV-RFRDQSLAPKKS----KSIKRCRELPVEMT-AEALIVDSTN 120

Query: 121 RLGPEPSHVPKDLWKVLGLGC--------SGERRLGGTTAAAAEMEFSGSAFSVSPPPSS 180
           RLGPEPSHVPKDLW VLGL             R LG     AAE+EFSGSAFSVSPPPSS
Sbjct: 121 RLGPEPSHVPKDLWVVLGLRLPPPPPRPWEDSRSLG----VAAEIEFSGSAFSVSPPPSS 180

Query: 181 VPLPKFSVRREVGCNVE-AAGVDAGATDNLRRLLRLR 199
           VPLP FS+ R++ CNVE AAG+D GAT+NLRRLLRLR
Sbjct: 181 VPLPNFSLMRKLNCNVEAAAGIDTGATNNLRRLLRLR 185

[Close]

BLAST of Moc08g08320 vs. TAIR 10
Match: AT1G20070.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; Has 26 Blast hits to 26 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 58.5 bits (140), Expect = 6.9e-09
Identity = 25/43 (58.14%), Postives = 37/43 (86.05%), Query Frame = 0


Query: 156 VSPPPSSVPLPKFSVRREVGCNVEAAGVDAGATDNLRRLLRLR 199
           +SPPPSS+P+P+FS++ ++ CNVEAAG    AT+N+RR+L+LR
Sbjct: 151 LSPPPSSLPMPRFSIKPKLRCNVEAAGKSDVATNNIRRVLQLR 193

[Close]

BLAST of Moc08g08320 vs. TAIR 10
Match: AT4G32020.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G25250.1); Has 65 Blast hits to 65 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 8; Plants - 54; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 46.2 bits (108), Expect = 3.5e-05
Identity = 51/161 (31.68%), Postives = 73/161 (45.34%), Query Frame = 0


Query: 44  RRQQPPLLPFPHRPLPPPPCR-----QRGTPKSRDQSLTPKKSKSKTKSTKRSREPPAAK 103
           R   PP+ P    PLPPP         +GT K   +SL+   + S+ +  KR  E P   
Sbjct: 52  RSSSPPVAP----PLPPPRAAVSAFVPKGTLK---KSLSNTVAVSQVRILKRGEEIPKET 111

Query: 104 SGAEIVIVD--STNRLGPEPSHVPKDLWKVLGLGCSGERRLGGTTAAAAEMEFSGSAFSV 163
           S   + + D  ST R+GP+P  +P            G+ RL G  + +A   ++G     
Sbjct: 112 SDLVVEMSDLGSTRRIGPDPGLIP------------GQIRLSGRKSKSAPF-YAGPVTMT 171

Query: 164 SPPPSSVPLPKFSVRREVGCNVEAAGVDAGATDNLRRLLRL 198
           SPPPS VPLP F  ++              AT++L R+LRL
Sbjct: 172 SPPPSDVPLPAFFTKK--------------ATNDLIRILRL 178

[Close]

BLAST of Moc08g08320 vs. TAIR 10
Match: AT3G21570.1 (unknown protein; Has 43 Blast hits to 43 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 45.1 bits (105), Expect = 7.8e-05
Identity = 24/56 (42.86%), Postives = 36/56 (64.29%), Query Frame = 0


Query: 143 AAAEMEFSGSAFSVSPPPSSVPLPKFSVRREVGCNVEAAGVDAGATDNLRRLLRLR 199
           +A ++    S F+VSP PSS+PLP FS +++    V    +D  A+ +LRRLLRL+
Sbjct: 81  SADDIYAGSSIFAVSPAPSSLPLPSFS-KKKAKSQVVVVSIDDSASQDLRRLLRLK 135

The following BLAST results are available for this feature:

BLAST of Moc08g08320 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022997633.1	7.0e-64	71.36	uncharacterized protein LOC111492508 [Cucurbita maxima]	[more]
XP_023546813.1	2.0e-63	71.36	proline-rich receptor-like protein kinase PERK2 [Cucurbita pepo subsp. pepo]	[more]
XP_022962625.1	5.9e-63	70.87	uncharacterized protein LOC111463019 [Cucurbita moschata]	[more]
KAG7029446.1	1.0e-62	70.87	hypothetical protein SDJN02_07785, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6598509.1	1.0e-62	70.87	hypothetical protein SDJN03_08287, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Moc08g08320 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc08g08320 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KEH8	3.4e-64	71.36	uncharacterized protein LOC111492508 OS=Cucurbita maxima OX=3661 GN=LOC111492508...	[more]
A0A6J1HFM4	2.9e-63	70.87	uncharacterized protein LOC111463019 OS=Cucurbita moschata OX=3662 GN=LOC1114630...	[more]
A0A5A7VG22	6.4e-55	66.35	Sec-independent protein translocase protein TATC OS=Cucumis melo var. makuwa OX=...	[more]
A0A0A0LN70	8.4e-55	63.43	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G345930 PE=4 SV=1	[more]
A0A6J1KQN3	4.6e-37	53.46	uncharacterized protein LOC111496332 OS=Cucurbita maxima OX=3661 GN=LOC111496332...	[more]

BLAST of Moc08g08320 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G20070.1	6.9e-09	58.14	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G32020.1	3.5e-05	31.68	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G21570.1	7.8e-05	42.86	unknown protein; Has 43 Blast hits to 43 proteins in 13 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF15365	PNRC	coord: 149..168 e-value: 6.6E-5 score: 22.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..99
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..66
None	No IPR available	PANTHER	PTHR33670:SF14	SPLICING FACTOR, PROLINE- AND GLUTAMINE-RICH-LIKE	coord: 34..198
None	No IPR available	PANTHER	PTHR33670	SPLICING FACTOR, PROLINE- AND GLUTAMINE-RICH-LIKE	coord: 34..198

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc08g08320.1	Moc08g08320.1	mRNA