Moc08g06480 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc08g06480
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Ethylene-responsive transcription factor
Location	chr8: 4775011 .. 4775439 (+)
RNA-Seq Expression	Moc08g06480
Synteny	Moc08g06480

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGGAGAGTGGTGCGGCACGAGTTCGGCGGGCGAGAAGCGGAAGCAGCGGCGGCAGGAGAAGCCGTACAGAGGGATACGGATGAGGAAGTGGGGGAAGTGGGTGGCCGAAATCAGAGAACCCAACAAGAGGTCTCGCATTTGGCTGGGTTCCTACACCACCCCCGTCGCCGCCGCCAGAGCCTACGACACCGCCGTCTTCTACCTCCGTGGCCCCTCCGCCCGCCTCAACTTTCCCGAATTGATCTTCCACGACATGGACGATCACCACCTCCCCGACGTCTCCCCTTCTTCAATCCGCAAAAGAGCCATAGAGGTCGGCGCCAGAGTCGACGCCCACCAAACTTCTCTCTCCCAATCCAAACCCATTTCCGACAAGCCCGATTTGAACCAGTTTCCGCACCCCGAAACCTCAGACGAAGATTGA

mRNA sequence

ATGGAAGGAGAGTGGTGCGGCACGAGTTCGGCGGGCGAGAAGCGGAAGCAGCGGCGGCAGGAGAAGCCGTACAGAGGGATACGGATGAGGAAGTGGGGGAAGTGGGTGGCCGAAATCAGAGAACCCAACAAGAGGTCTCGCATTTGGCTGGGTTCCTACACCACCCCCGTCGCCGCCGCCAGAGCCTACGACACCGCCGTCTTCTACCTCCGTGGCCCCTCCGCCCGCCTCAACTTTCCCGAATTGATCTTCCACGACATGGACGATCACCACCTCCCCGACGTCTCCCCTTCTTCAATCCGCAAAAGAGCCATAGAGGTCGGCGCCAGAGTCGACGCCCACCAAACTTCTCTCTCCCAATCCAAACCCATTTCCGACAAGCCCGATTTGAACCAGTTTCCGCACCCCGAAACCTCAGACGAAGATTGA

Coding sequence (CDS)

ATGGAAGGAGAGTGGTGCGGCACGAGTTCGGCGGGCGAGAAGCGGAAGCAGCGGCGGCAGGAGAAGCCGTACAGAGGGATACGGATGAGGAAGTGGGGGAAGTGGGTGGCCGAAATCAGAGAACCCAACAAGAGGTCTCGCATTTGGCTGGGTTCCTACACCACCCCCGTCGCCGCCGCCAGAGCCTACGACACCGCCGTCTTCTACCTCCGTGGCCCCTCCGCCCGCCTCAACTTTCCCGAATTGATCTTCCACGACATGGACGATCACCACCTCCCCGACGTCTCCCCTTCTTCAATCCGCAAAAGAGCCATAGAGGTCGGCGCCAGAGTCGACGCCCACCAAACTTCTCTCTCCCAATCCAAACCCATTTCCGACAAGCCCGATTTGAACCAGTTTCCGCACCCCGAAACCTCAGACGAAGATTGA

Protein sequence

MEGEWCGTSSAGEKRKQRRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLNFPELIFHDMDDHHLPDVSPSSIRKRAIEVGARVDAHQTSLSQSKPISDKPDLNQFPHPETSDED

Homology

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BLAST of Moc08g06480 vs. NCBI nr
Match: XP_022131468.1 (ethylene-responsive transcription factor RAP2-1-like [Momordica charantia])

HSP 1 Score: 292.7 bits (748), Expect = 1.7e-75
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0


Query: 1   MEGEWCGTSSAGEKRKQRRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAA 60
           MEGEWCGTSSAGEKRKQRRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAA
Sbjct: 1   MEGEWCGTSSAGEKRKQRRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAA 60

Query: 61  RAYDTAVFYLRGPSARLNFPELIFHDMDDHHLPDVSPSSIRKRAIEVGARVDAHQTSLSQ 120
           RAYDTAVFYLRGPSARLNFPELIFHDMDDHHLPDVSPSSIRKRAIEVGARVDAHQTSLSQ
Sbjct: 61  RAYDTAVFYLRGPSARLNFPELIFHDMDDHHLPDVSPSSIRKRAIEVGARVDAHQTSLSQ 120

Query: 121 SKPISDKPDLNQFPHPETSDED 143
           SKPISDKPDLNQFPHPETSDED
Sbjct: 121 SKPISDKPDLNQFPHPETSDED 142

[Close]

BLAST of Moc08g06480 vs. NCBI nr
Match: XP_038884237.1 (ethylene-responsive transcription factor RAP2-1-like [Benincasa hispida])

HSP 1 Score: 225.7 bits (574), Expect = 2.5e-55
Identity = 119/134 (88.81%), Postives = 123/134 (91.79%), Query Frame = 0


Query: 13  EKRKQR--RQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYL 72
           EKRKQ+  RQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTP+AAARAYDTAVFYL
Sbjct: 11  EKRKQQTGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAARAYDTAVFYL 70

Query: 73  RGPSARLNFPELIFHDMDDHHLPDVSPSSIRKRAIEVGARVD--AHQTSLSQSKPISDKP 132
           RGPSARLNFP+LI  DM DH L DVSPSSIRKRAIEVGARVD  AHQTSL QSKPISDKP
Sbjct: 71  RGPSARLNFPDLILQDM-DHQLLDVSPSSIRKRAIEVGARVDAAAHQTSLRQSKPISDKP 130

Query: 133 DLNQFPHPETSDED 143
           DLNQFP PE+SDED
Sbjct: 131 DLNQFPDPESSDED 143

[Close]

BLAST of Moc08g06480 vs. NCBI nr
Match: XP_008444599.1 (PREDICTED: ethylene-responsive transcription factor RAP2-1 [Cucumis melo] >KAA0060919.1 ethylene-responsive transcription factor RAP2-1 [Cucumis melo var. makuwa])

HSP 1 Score: 225.3 bits (573), Expect = 3.3e-55
Identity = 119/133 (89.47%), Postives = 122/133 (91.73%), Query Frame = 0


Query: 13  EKRKQR-RQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLR 72
           EKRKQ  RQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTP+AAARAYDTAVFYLR
Sbjct: 11  EKRKQSGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAARAYDTAVFYLR 70

Query: 73  GPSARLNFPELIFHDMDDHHLPDVSPSSIRKRAIEVGARVD--AHQTSLSQSKPISDKPD 132
           GPSARLNFP+LI  DM DH L DVSPSSIRKRAIEVGARVD  AHQTSL QSKPISDKPD
Sbjct: 71  GPSARLNFPDLILQDM-DHQLLDVSPSSIRKRAIEVGARVDAAAHQTSLRQSKPISDKPD 130

Query: 133 LNQFPHPETSDED 143
           LNQFP PE+SDED
Sbjct: 131 LNQFPDPESSDED 142

[Close]

BLAST of Moc08g06480 vs. NCBI nr
Match: XP_004142875.1 (ethylene-responsive transcription factor RAP2-1 [Cucumis sativus] >KGN62486.1 hypothetical protein Csa_018768 [Cucumis sativus])

HSP 1 Score: 222.6 bits (566), Expect = 2.1e-54
Identity = 118/133 (88.72%), Postives = 121/133 (90.98%), Query Frame = 0


Query: 13  EKRKQR-RQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLR 72
           EKRKQ  RQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTP+AAARAYDTAVFYLR
Sbjct: 11  EKRKQSGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAARAYDTAVFYLR 70

Query: 73  GPSARLNFPELIFHDMDDHHLPDVSPSSIRKRAIEVGARVD--AHQTSLSQSKPISDKPD 132
           GPSARLNFP+LI  DM DH L DVSPSSIRKRAIEVGARVD  AHQTSL QSKPISDKPD
Sbjct: 71  GPSARLNFPDLILQDM-DHQLLDVSPSSIRKRAIEVGARVDAAAHQTSLRQSKPISDKPD 130

Query: 133 LNQFPHPETSDED 143
           LNQFP PE+S ED
Sbjct: 131 LNQFPDPESSGED 142

[Close]

BLAST of Moc08g06480 vs. NCBI nr
Match: KAG7029328.1 (Ethylene-responsive transcription factor RAP2-1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 220.3 bits (560), Expect = 1.0e-53
Identity = 117/138 (84.78%), Postives = 124/138 (89.86%), Query Frame = 0


Query: 9   SSAGEKRKQ--RRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTA 68
           S+  EKRKQ   RQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTP+AAARAYDTA
Sbjct: 94  STIPEKRKQLTGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAARAYDTA 153

Query: 69  VFYLRGPSARLNFPELIFHDMDDHHLPDVSPSSIRKRAIEVGARVD--AHQTSLSQSKPI 128
           VFYLRGPSARLNFP+LI  DM DH L DVSPSSIRKRAIEVGARVD  A++TSL QSKPI
Sbjct: 154 VFYLRGPSARLNFPDLILQDM-DHQLLDVSPSSIRKRAIEVGARVDAAANRTSLRQSKPI 213

Query: 129 SDKPDLNQFPHPETSDED 143
           S+KPDLNQFP PE+SDED
Sbjct: 214 SEKPDLNQFPEPESSDED 230

[Close]

BLAST of Moc08g06480 vs. ExPASy Swiss-Prot
Match: Q8LC30 (Ethylene-responsive transcription factor RAP2-1 OS=Arabidopsis thaliana OX=3702 GN=RAP2-1 PE=2 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 3.0e-35
Identity = 86/143 (60.14%), Postives = 98/143 (68.53%), Query Frame = 0


Query: 10  SAGEKRKQRRQE---------KPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAA 69
           S   KR+Q  QE         KPYRGIR RKWGKWVAEIREPNKRSR+WLGSYTT +AAA
Sbjct: 8   STMRKRRQPPQEEVPNHVATRKPYRGIRRRKWGKWVAEIREPNKRSRLWLGSYTTDIAAA 67

Query: 70  RAYDTAVFYLRGPSARLNFPELIFHDMDDHHL-----PDVSPSSIRKRAIEVGARVDA-- 129
           RAYD AVFYLRGPSARLNFP+L+  + D  HL      D+  + IR++A EVGARVDA  
Sbjct: 68  RAYDVAVFYLRGPSARLNFPDLLLQEED--HLSAATTADMPAALIREKAAEVGARVDALL 127

Query: 130 --HQTSLSQSKPISDKPDLNQFP 135
                S++ S P   KPDLNQ P
Sbjct: 128 ASAAPSMAHSTPPVIKPDLNQIP 148

[Close]

BLAST of Moc08g06480 vs. ExPASy Swiss-Prot
Match: Q8W3M3 (Ethylene-responsive transcription factor RAP2-9 OS=Arabidopsis thaliana OX=3702 GN=RAP2-9 PE=2 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 3.3e-34
Identity = 78/116 (67.24%), Postives = 89/116 (76.72%), Query Frame = 0


Query: 21  EKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLNFP 80
           EK Y+GIRMRKWGKWVAEIREPNKRSRIWLGSY T VAAARAYDTAVFYLRGPSARLNFP
Sbjct: 33  EKRYKGIRMRKWGKWVAEIREPNKRSRIWLGSYKTAVAAARAYDTAVFYLRGPSARLNFP 92

Query: 81  ELIFHDMD--DHHLPDVSPSSIRKRAIEVGARVDAHQTSLSQSKPISDKPDLNQFP 135
           E +F D +  +    D+SP+ IRK+A EVGARVDA    L     + +  D+N+ P
Sbjct: 93  EEVFKDGNGGEGLGGDMSPTLIRKKAAEVGARVDA---ELRLENRMVENLDMNKLP 145

[Close]

BLAST of Moc08g06480 vs. ExPASy Swiss-Prot
Match: Q9FH94 (Ethylene-responsive transcription factor ERF010 OS=Arabidopsis thaliana OX=3702 GN=ERF010 PE=2 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 1.6e-33
Identity = 82/171 (47.95%), Postives = 105/171 (61.40%), Query Frame = 0


Query: 18  RRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARL 77
           R++++PY+GIRMRKWGKWVAEIREPNKRSR+WLGSY+TP AAARAYDTAVFYLRGP+ARL
Sbjct: 15  RKRDRPYKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTAVFYLRGPTARL 74

Query: 78  NFPELI----FHDMDDHHLPDVSPSSIRKRAIEVGARVDAHQTSLSQSK----------- 137
           NFPEL+    F D       D+S ++IRK+A EVGA+VDA  T++  ++           
Sbjct: 75  NFPELLPGEKFSD------EDMSAATIRKKATEVGAQVDALGTAVQNNRHRVFGQNRDSD 134

Query: 138 -------------------------------PISDKPDLNQFPHPETSDED 143
                                           + D+ DLN+ P PE+SDE+
Sbjct: 135 VDNKNFHRNYQNGEREEEEEDEDDKRLRSGGRLLDRVDLNKLPDPESSDEE 179

[Close]

BLAST of Moc08g06480 vs. ExPASy Swiss-Prot
Match: Q9SNE1 (Ethylene-responsive transcription factor ERF011 OS=Arabidopsis thaliana OX=3702 GN=ERF011 PE=2 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 6.2e-33
Identity = 77/150 (51.33%), Postives = 101/150 (67.33%), Query Frame = 0


Query: 7   GTSSAGEKRKQRRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTA 66
           G +   +   + ++E+P++GIRMRKWGKWVAEIREPNKRSR+WLGSY+TP AAARAYDTA
Sbjct: 4   GVAVKADVAVKMKRERPFKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTA 63

Query: 67  VFYLRGPSARLNFPELIFHDMDDHHLPDVSPSSIRKRAIEVGARVDAHQTSLSQSKP--- 126
           VFYLRGP+A LNFPEL    +      D+S ++IRK+A EVGA+VDA   ++ Q+     
Sbjct: 64  VFYLRGPTATLNFPEL----LPCTSAEDMSAATIRKKATEVGAQVDAIGATVVQNNKRRR 123

Query: 127 -----------ISDKPDLNQFPHPETSDED 143
                      + +  DLN+ P PE  D+D
Sbjct: 124 VFSQKRDFGGGLLELVDLNKLPDPENLDDD 149

[Close]

BLAST of Moc08g06480 vs. ExPASy Swiss-Prot
Match: O22174 (Ethylene-responsive transcription factor ERF008 OS=Arabidopsis thaliana OX=3702 GN=ERF008 PE=2 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 1.8e-32
Identity = 80/148 (54.05%), Postives = 94/148 (63.51%), Query Frame = 0


Query: 17  QRRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSAR 76
           ++R  KPY+GIRMRKWGKWVAEIREPNKRSRIWLGSY TP AAARAYDTAVFYLRGPSAR
Sbjct: 21  RKRDLKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYATPEAAARAYDTAVFYLRGPSAR 80

Query: 77  LNFPELIFH---DMDDHHLPDVSPSSIRKRAIEVGARVDAHQTSL--------------- 136
           LNFPEL+             D+S + IR++A EVGA+VDA   ++               
Sbjct: 81  LNFPELLAGLTVSNGGGRGGDLSAAYIRRKAAEVGAQVDALGATVVVNTGGENRGDYEKI 140

Query: 137 ----SQSKPISDKPDLNQFPHPETSDED 143
                      ++ DLN+ P PE SD D
Sbjct: 141 ENCRKSGNGSLERVDLNKLPDPENSDGD 168

[Close]

BLAST of Moc08g06480 vs. ExPASy TrEMBL
Match: A0A6J1BTG4 (ethylene-responsive transcription factor RAP2-1-like OS=Momordica charantia OX=3673 GN=LOC111004668 PE=4 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 8.1e-76
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0


Query: 1   MEGEWCGTSSAGEKRKQRRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAA 60
           MEGEWCGTSSAGEKRKQRRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAA
Sbjct: 1   MEGEWCGTSSAGEKRKQRRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAA 60

Query: 61  RAYDTAVFYLRGPSARLNFPELIFHDMDDHHLPDVSPSSIRKRAIEVGARVDAHQTSLSQ 120
           RAYDTAVFYLRGPSARLNFPELIFHDMDDHHLPDVSPSSIRKRAIEVGARVDAHQTSLSQ
Sbjct: 61  RAYDTAVFYLRGPSARLNFPELIFHDMDDHHLPDVSPSSIRKRAIEVGARVDAHQTSLSQ 120

Query: 121 SKPISDKPDLNQFPHPETSDED 143
           SKPISDKPDLNQFPHPETSDED
Sbjct: 121 SKPISDKPDLNQFPHPETSDED 142

[Close]

BLAST of Moc08g06480 vs. ExPASy TrEMBL
Match: A0A5A7V5C8 (Ethylene-responsive transcription factor RAP2-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00520 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 1.6e-55
Identity = 119/133 (89.47%), Postives = 122/133 (91.73%), Query Frame = 0


Query: 13  EKRKQR-RQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLR 72
           EKRKQ  RQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTP+AAARAYDTAVFYLR
Sbjct: 11  EKRKQSGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAARAYDTAVFYLR 70

Query: 73  GPSARLNFPELIFHDMDDHHLPDVSPSSIRKRAIEVGARVD--AHQTSLSQSKPISDKPD 132
           GPSARLNFP+LI  DM DH L DVSPSSIRKRAIEVGARVD  AHQTSL QSKPISDKPD
Sbjct: 71  GPSARLNFPDLILQDM-DHQLLDVSPSSIRKRAIEVGARVDAAAHQTSLRQSKPISDKPD 130

Query: 133 LNQFPHPETSDED 143
           LNQFP PE+SDED
Sbjct: 131 LNQFPDPESSDED 142

[Close]

BLAST of Moc08g06480 vs. ExPASy TrEMBL
Match: A0A1S3BAR1 (ethylene-responsive transcription factor RAP2-1 OS=Cucumis melo OX=3656 GN=LOC103487870 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 1.6e-55
Identity = 119/133 (89.47%), Postives = 122/133 (91.73%), Query Frame = 0


Query: 13  EKRKQR-RQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLR 72
           EKRKQ  RQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTP+AAARAYDTAVFYLR
Sbjct: 11  EKRKQSGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAARAYDTAVFYLR 70

Query: 73  GPSARLNFPELIFHDMDDHHLPDVSPSSIRKRAIEVGARVD--AHQTSLSQSKPISDKPD 132
           GPSARLNFP+LI  DM DH L DVSPSSIRKRAIEVGARVD  AHQTSL QSKPISDKPD
Sbjct: 71  GPSARLNFPDLILQDM-DHQLLDVSPSSIRKRAIEVGARVDAAAHQTSLRQSKPISDKPD 130

Query: 133 LNQFPHPETSDED 143
           LNQFP PE+SDED
Sbjct: 131 LNQFPDPESSDED 142

[Close]

BLAST of Moc08g06480 vs. ExPASy TrEMBL
Match: A0A0A0LR87 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G356600 PE=4 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 1.0e-54
Identity = 118/133 (88.72%), Postives = 121/133 (90.98%), Query Frame = 0


Query: 13  EKRKQR-RQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLR 72
           EKRKQ  RQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTP+AAARAYDTAVFYLR
Sbjct: 11  EKRKQSGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAARAYDTAVFYLR 70

Query: 73  GPSARLNFPELIFHDMDDHHLPDVSPSSIRKRAIEVGARVD--AHQTSLSQSKPISDKPD 132
           GPSARLNFP+LI  DM DH L DVSPSSIRKRAIEVGARVD  AHQTSL QSKPISDKPD
Sbjct: 71  GPSARLNFPDLILQDM-DHQLLDVSPSSIRKRAIEVGARVDAAAHQTSLRQSKPISDKPD 130

Query: 133 LNQFPHPETSDED 143
           LNQFP PE+S ED
Sbjct: 131 LNQFPDPESSGED 142

[Close]

BLAST of Moc08g06480 vs. ExPASy TrEMBL
Match: A0A6J1HCJ9 (ethylene-responsive transcription factor RAP2-1-like OS=Cucurbita moschata OX=3662 GN=LOC111462838 PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 5.1e-54
Identity = 117/138 (84.78%), Postives = 124/138 (89.86%), Query Frame = 0


Query: 9   SSAGEKRKQ--RRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTA 68
           S+  EKRKQ   RQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTP+AAARAYDTA
Sbjct: 7   STIPEKRKQLTGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAARAYDTA 66

Query: 69  VFYLRGPSARLNFPELIFHDMDDHHLPDVSPSSIRKRAIEVGARVD--AHQTSLSQSKPI 128
           VFYLRGPSARLNFP+LI  DM DH L DVSPSSIRKRAIEVGARVD  A++TSL QSKPI
Sbjct: 67  VFYLRGPSARLNFPDLILQDM-DHQLLDVSPSSIRKRAIEVGARVDAAANRTSLRQSKPI 126

Query: 129 SDKPDLNQFPHPETSDED 143
           S+KPDLNQFP PE+SDED
Sbjct: 127 SEKPDLNQFPEPESSDED 143

[Close]

BLAST of Moc08g06480 vs. TAIR 10
Match: AT1G46768.1 (related to AP2 1 )

HSP 1 Score: 149.4 bits (376), Expect = 2.1e-36
Identity = 86/143 (60.14%), Postives = 98/143 (68.53%), Query Frame = 0


Query: 10  SAGEKRKQRRQE---------KPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAA 69
           S   KR+Q  QE         KPYRGIR RKWGKWVAEIREPNKRSR+WLGSYTT +AAA
Sbjct: 8   STMRKRRQPPQEEVPNHVATRKPYRGIRRRKWGKWVAEIREPNKRSRLWLGSYTTDIAAA 67

Query: 70  RAYDTAVFYLRGPSARLNFPELIFHDMDDHHL-----PDVSPSSIRKRAIEVGARVDA-- 129
           RAYD AVFYLRGPSARLNFP+L+  + D  HL      D+  + IR++A EVGARVDA  
Sbjct: 68  RAYDVAVFYLRGPSARLNFPDLLLQEED--HLSAATTADMPAALIREKAAEVGARVDALL 127

Query: 130 --HQTSLSQSKPISDKPDLNQFP 135
                S++ S P   KPDLNQ P
Sbjct: 128 ASAAPSMAHSTPPVIKPDLNQIP 148

[Close]

BLAST of Moc08g06480 vs. TAIR 10
Match: AT4G06746.1 (related to AP2 9 )

HSP 1 Score: 146.0 bits (367), Expect = 2.3e-35
Identity = 78/116 (67.24%), Postives = 89/116 (76.72%), Query Frame = 0


Query: 21  EKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLNFP 80
           EK Y+GIRMRKWGKWVAEIREPNKRSRIWLGSY T VAAARAYDTAVFYLRGPSARLNFP
Sbjct: 33  EKRYKGIRMRKWGKWVAEIREPNKRSRIWLGSYKTAVAAARAYDTAVFYLRGPSARLNFP 92

Query: 81  ELIFHDMD--DHHLPDVSPSSIRKRAIEVGARVDAHQTSLSQSKPISDKPDLNQFP 135
           E +F D +  +    D+SP+ IRK+A EVGARVDA    L     + +  D+N+ P
Sbjct: 93  EEVFKDGNGGEGLGGDMSPTLIRKKAAEVGARVDA---ELRLENRMVENLDMNKLP 145

[Close]

BLAST of Moc08g06480 vs. TAIR 10
Match: AT5G67190.1 (DREB and EAR motif protein 2 )

HSP 1 Score: 143.7 bits (361), Expect = 1.2e-34
Identity = 82/171 (47.95%), Postives = 105/171 (61.40%), Query Frame = 0


Query: 18  RRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARL 77
           R++++PY+GIRMRKWGKWVAEIREPNKRSR+WLGSY+TP AAARAYDTAVFYLRGP+ARL
Sbjct: 15  RKRDRPYKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTAVFYLRGPTARL 74

Query: 78  NFPELI----FHDMDDHHLPDVSPSSIRKRAIEVGARVDAHQTSLSQSK----------- 137
           NFPEL+    F D       D+S ++IRK+A EVGA+VDA  T++  ++           
Sbjct: 75  NFPELLPGEKFSD------EDMSAATIRKKATEVGAQVDALGTAVQNNRHRVFGQNRDSD 134

Query: 138 -------------------------------PISDKPDLNQFPHPETSDED 143
                                           + D+ DLN+ P PE+SDE+
Sbjct: 135 VDNKNFHRNYQNGEREEEEEDEDDKRLRSGGRLLDRVDLNKLPDPESSDEE 179

[Close]

BLAST of Moc08g06480 vs. TAIR 10
Match: AT3G50260.1 (cooperatively regulated by ethylene and jasmonate 1 )

HSP 1 Score: 141.7 bits (356), Expect = 4.4e-34
Identity = 77/150 (51.33%), Postives = 101/150 (67.33%), Query Frame = 0


Query: 7   GTSSAGEKRKQRRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTA 66
           G +   +   + ++E+P++GIRMRKWGKWVAEIREPNKRSR+WLGSY+TP AAARAYDTA
Sbjct: 4   GVAVKADVAVKMKRERPFKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTA 63

Query: 67  VFYLRGPSARLNFPELIFHDMDDHHLPDVSPSSIRKRAIEVGARVDAHQTSLSQSKP--- 126
           VFYLRGP+A LNFPEL    +      D+S ++IRK+A EVGA+VDA   ++ Q+     
Sbjct: 64  VFYLRGPTATLNFPEL----LPCTSAEDMSAATIRKKATEVGAQVDAIGATVVQNNKRRR 123

Query: 127 -----------ISDKPDLNQFPHPETSDED 143
                      + +  DLN+ P PE  D+D
Sbjct: 124 VFSQKRDFGGGLLELVDLNKLPDPENLDDD 149

[Close]

BLAST of Moc08g06480 vs. TAIR 10
Match: AT2G23340.1 (DREB and EAR motif protein 3 )

HSP 1 Score: 140.2 bits (352), Expect = 1.3e-33
Identity = 80/148 (54.05%), Postives = 94/148 (63.51%), Query Frame = 0


Query: 17  QRRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSAR 76
           ++R  KPY+GIRMRKWGKWVAEIREPNKRSRIWLGSY TP AAARAYDTAVFYLRGPSAR
Sbjct: 21  RKRDLKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYATPEAAARAYDTAVFYLRGPSAR 80

Query: 77  LNFPELIFH---DMDDHHLPDVSPSSIRKRAIEVGARVDAHQTSL--------------- 136
           LNFPEL+             D+S + IR++A EVGA+VDA   ++               
Sbjct: 81  LNFPELLAGLTVSNGGGRGGDLSAAYIRRKAAEVGAQVDALGATVVVNTGGENRGDYEKI 140

Query: 137 ----SQSKPISDKPDLNQFPHPETSDED 143
                      ++ DLN+ P PE SD D
Sbjct: 141 ENCRKSGNGSLERVDLNKLPDPENSDGD 168

The following BLAST results are available for this feature:

BLAST of Moc08g06480 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022131468.1	1.7e-75	100.00	ethylene-responsive transcription factor RAP2-1-like [Momordica charantia]	[more]
XP_038884237.1	2.5e-55	88.81	ethylene-responsive transcription factor RAP2-1-like [Benincasa hispida]	[more]
XP_008444599.1	3.3e-55	89.47	PREDICTED: ethylene-responsive transcription factor RAP2-1 [Cucumis melo] >KAA00...	[more]
XP_004142875.1	2.1e-54	88.72	ethylene-responsive transcription factor RAP2-1 [Cucumis sativus] >KGN62486.1 hy...	[more]
KAG7029328.1	1.0e-53	84.78	Ethylene-responsive transcription factor RAP2-1, partial [Cucurbita argyrosperma...	[more]

BLAST of Moc08g06480 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LC30	3.0e-35	60.14	Ethylene-responsive transcription factor RAP2-1 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q8W3M3	3.3e-34	67.24	Ethylene-responsive transcription factor RAP2-9 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9FH94	1.6e-33	47.95	Ethylene-responsive transcription factor ERF010 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9SNE1	6.2e-33	51.33	Ethylene-responsive transcription factor ERF011 OS=Arabidopsis thaliana OX=3702 ...	[more]
O22174	1.8e-32	54.05	Ethylene-responsive transcription factor ERF008 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Moc08g06480 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BTG4	8.1e-76	100.00	ethylene-responsive transcription factor RAP2-1-like OS=Momordica charantia OX=3...	[more]
A0A5A7V5C8	1.6e-55	89.47	Ethylene-responsive transcription factor RAP2-1 OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S3BAR1	1.6e-55	89.47	ethylene-responsive transcription factor RAP2-1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0LR87	1.0e-54	88.72	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G356600 PE=...	[more]
A0A6J1HCJ9	5.1e-54	84.78	ethylene-responsive transcription factor RAP2-1-like OS=Cucurbita moschata OX=36...	[more]

BLAST of Moc08g06480 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G46768.1	2.1e-36	60.14	related to AP2 1	[more]
AT4G06746.1	2.3e-35	67.24	related to AP2 9	[more]
AT5G67190.1	1.2e-34	47.95	DREB and EAR motif protein 2	[more]
AT3G50260.1	4.4e-34	51.33	cooperatively regulated by ethylene and jasmonate 1	[more]
AT2G23340.1	1.3e-33	54.05	DREB and EAR motif protein 3	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 24..35 score: 64.24 coord: 62..82 score: 52.64
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 23..86 e-value: 5.4E-36 score: 135.6
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 24..72 e-value: 1.9E-11 score: 44.0
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 23..80 score: 22.128345
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 24..82 e-value: 3.20199E-28 score: 96.957
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 23..81 e-value: 5.0E-25 score: 89.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 111..142
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 113..127
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 9..23
None	No IPR available	PANTHER	PTHR31729	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED	coord: 13..140
None	No IPR available	PANTHER	PTHR31729:SF2	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED	coord: 13..140
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 23..81

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc08g06480.1	Moc08g06480.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity