Moc08g04160 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc08g04160
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Ammonium_transp domain-containing protein
Location	chr8: 3048084 .. 3048533 (+)
RNA-Seq Expression	Moc08g04160
Synteny	Moc08g04160

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGAGCAAGGGCGACAACGCGTGGCAGATGACGGCGGCGACGCTGGTGGGGCTGCAGAGCGTGCCGGGGCTGATAATCCTGTACGGCGGGGCGGTGAAGAAGAAGTGGGCGATCAACTCGGCGTTCATGGCGCTGTACGCGTTCGCGTGCGTGCTGGTGTGCTGGGTCGGGTGGGGGTACCGGCTGTCGTTTGGGGACAAGCTGGTGCCGTTTTGGGGGAAGCTCAACGTGGCGCTGGACCAGAAGTTTCTGCTGGACCCGGCCTTCAGCGGCAAGTTCCCCTCCGCGACCATGGTGTTCTTCCAGTTCGTGTTCGCCGCGATCACTCTGGTCCTCATCGCGGGGGCTCTCCTGGGCCGGATGAATTTCTATGCCTGGATGCTCTTCGTGCCGCTCTGGCTCACCTTCTCCTATACCTTTGTGGCGTTCAGTATTTGGAGCCCTAA

mRNA sequence

ATGGATGAGCAAGGGCGACAACGCGTGGCAGATGACGGCGGCGACGCTGGTGGGGCTGCAGAGCGTGCCGGGGCTGATAATCCTGTACGGCGGGGCGGTGAAGAAGAAGTGGGCGATCAACTCGGCGTTCATGGCGCTGTACGCGTTCGCGTGCGTGCTGGTGTGCTGGGTCGGGTGGGGGTACCGGCTGTCGTTTGGGGACAAGCTGGTGCCGTTTTGGGGGAAGCTCAACGTGGCGCTGGACCAGAAGTTTCTGCTGGACCCGGCCTTCAGCGGCAAGTTCCCCTCCGCGACCATGGTGTTCTTCCAGTTCGTGTTCGCCGCGATCACTCTGGTCCTCATCGCGGGGGCTCTCCTGGGCCGGATGAATTTCTATGCCTGGATGCTCTTCGTGCCGCTCTGGCTCACCTTCTCCTATACCTTTGTGGCGTTCAGTATTTGGAGCCCTAA

Coding sequence (CDS)

ATGGATGAGCAAGGGCGACAACGCGTGGCAGATGACGGCGGCGACGCTGGTGGGGCTGCAGAGCGTGCCGGGGCTGATAATCCTGTACGGCGGGGCGGTGAAGAAGAAGTGGGCGATCAACTCGGCGTTCATGGCGCTGTACGCGTTCGCGTGCGTGCTGGTGTGCTGGGTCGGGTGGGGGTACCGGCTGTCGTTTGGGGACAAGCTGGTGCCGTTTTGGGGGAAGCTCAACGTGGCGCTGGACCAGAAGTTTCTGCTGGACCCGGCCTTCAGCGGCAAGTTCCCCTCCGCGACCATGGTGTTCTTCCAGTTCGTGTTCGCCGCGATCACTCTGGTCCTCATCGCGGGGGCTCTCCTGGGCCGGATGAATTTCTATGCCTGGATGCTCTTCGTGCCGCTCTGGCTCACCTTCTCCTATACCTTTGTGGCGTTCAGTATTTGGAGCCCTAA

Protein sequence

MDEQGRQRVADDGGDAGGAAERAGADNPVRRGGEEEVGDQLGVHGAVRVRVRAGVLGRVGVPAVVWGQAGAVLGEAQRGAGPEVSAGPGLQRQVPLRDHGVLPVRVRRDHSGPHRGGSPGPDEFLCLDALRAALAHLLLYLCGVQYLEP

Homology

[Close]

BLAST of Moc08g04160 vs. NCBI nr
Match: CAN75762.1 (hypothetical protein VITISV_034440 [Vitis vinifera])

HSP 1 Score: 101.7 bits (252), Expect = 5.7e-18
Identity = 64/149 (42.95%), Postives = 93/149 (62.42%), Query Frame = 0


Query: 1   MDEQGRQRVADDGGDAGGAAERAGADNPVRRGGEEEVGDQLGVHGAVRVRVRAGVLGRVG 60
           MDEQGRQRVA DGGDAGGA+E A   +P+R+  EE++G +L +HG + +R  AG+LG VG
Sbjct: 27  MDEQGRQRVAADGGDAGGASEHARTGDPLRQHREEKMGGELCLHGVLCLRDGAGLLGGVG 86

Query: 61  VPAVVWGQAGAVLGEAQRGAGPEVSAGPGLQRQVPLRDHGVLPVRVRRDHSGPHRGGSPG 120
           +P VV  +A +   +A+RG GP +S      R +   ++ +LPV VR  H+    G    
Sbjct: 87  LPNVVRRKARSFHRKAERGPGPRLSPEASFSRVLSQCNYDLLPVCVRGHHTDSDSGCIAW 146

Query: 121 PDEFLCLDALRAALAHLLLYLCGVQYLEP 150
            DE   +D +RAA+A+ LL+   +Q + P
Sbjct: 147 EDELPGVDVVRAAMAYFLLHCGRLQSMVP 175

[Close]

BLAST of Moc08g04160 vs. NCBI nr
Match: KAE8731461.1 (putative ammonium transporter 4 member 1 [Hibiscus syriacus])

HSP 1 Score: 79.7 bits (195), Expect = 2.3e-11
Identity = 46/110 (41.82%), Postives = 62/110 (56.36%), Query Frame = 0


Query: 37  VGDQLGVHGAVRVRVRAGVLGRVGVPAVVWGQAGAVLGEAQRGAGPEVSAGPGLQRQVPL 96
           +G +   HGA+R  +R  +LG  G+P VVWG+ G+V+ E +RG G  V     +  +V  
Sbjct: 1   MGGEHCFHGALRFCMRRFLLGGFGLPVVVWGKDGSVMRETERGVGRCVPDRTTVSGEVSE 60

Query: 97  RDHGVLPVRVRRDHSGPHRGGSPGPDEFLCLDALRAALAHLLLYLCGVQY 147
           RD GV P   RRDHS   R    G DE LC+  +RAA+A + LY  G  Y
Sbjct: 61  RDDGVFPGNFRRDHSDSDRRSVVGADELLCMHDVRAAVADVFLYFHGSVY 110

[Close]

BLAST of Moc08g04160 vs. NCBI nr
Match: GFS38575.1 (ammonium transporter 2 [Actinidia rufa])

HSP 1 Score: 55.5 bits (132), Expect = 4.7e-04
Identity = 36/86 (41.86%), Postives = 52/86 (60.47%), Query Frame = 0


Query: 3   EQGRQRVADDGGDAGGAAERAGADNPVRRGGEEEVGDQLGVHGAVRVRVRAGVLGRVGVP 62
           EQGRQR+ADDG D     E AG  +P+    +EEVG +LG+HG +R+R R  +LG   +P
Sbjct: 40  EQGRQRMADDGLDVSWPPEHAGLGHPLCEYSQEEVGRELGLHGPLRLRSRPHLLGPGRLP 99

Query: 63  AVVWGQAGAVLGEAQRGAGPEVSAGP 89
             +  +A  +LG+ +   GPE+   P
Sbjct: 100 NGLRRRALTLLGQGRPSPGPELPHSP 125

[Close]

BLAST of Moc08g04160 vs. ExPASy TrEMBL
Match: A0A6V7QYQ1 (Ammonium_transp domain-containing protein OS=Ananas comosus var. bracteatus OX=296719 GN=CB5_LOCUS31107 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 6.4e-23
Identity = 73/142 (51.41%), Postives = 93/142 (65.49%), Query Frame = 0


Query: 9   VADDGGDAGGAAERAGADNPVRRGGEEEVGDQLGVHGAVRVRVRAGVLGRVGVPAVVWGQ 68
           +A  GGDAGGAAERAGA + +R   EEEVG +LG+HG +R+R    +L  +G+P V+   
Sbjct: 1   MAAGGGDAGGAAERAGAGDLIREHREEEVGRELGLHGPLRLRRHLRLLVPLGLPHVLRRP 60

Query: 69  AGAVLGEAQRG-AGPEVSAGPGLQRQVPLRDHGVLPVRVRRDHSGPHRGGSPGPDEFLCL 128
             A+ G    G   PEV AGPGL+  +P R   +LPVR+RR H+ PHR G+P P E   L
Sbjct: 61  PAALPGPPGLGRPRPEVPAGPGLRGALPQRHPRLLPVRLRRHHADPHRRGAPRPHELQGL 120

Query: 129 DALRAALAHLLLYLCGVQYLEP 150
           DALR ALAHLLL+   +Q LEP
Sbjct: 121 DALRPALAHLLLHRRRLQRLEP 142

[Close]

BLAST of Moc08g04160 vs. ExPASy TrEMBL
Match: A5AK92 (Ammonium_transp domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_034440 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 2.8e-18
Identity = 64/149 (42.95%), Postives = 93/149 (62.42%), Query Frame = 0


Query: 1   MDEQGRQRVADDGGDAGGAAERAGADNPVRRGGEEEVGDQLGVHGAVRVRVRAGVLGRVG 60
           MDEQGRQRVA DGGDAGGA+E A   +P+R+  EE++G +L +HG + +R  AG+LG VG
Sbjct: 27  MDEQGRQRVAADGGDAGGASEHARTGDPLRQHREEKMGGELCLHGVLCLRDGAGLLGGVG 86

Query: 61  VPAVVWGQAGAVLGEAQRGAGPEVSAGPGLQRQVPLRDHGVLPVRVRRDHSGPHRGGSPG 120
           +P VV  +A +   +A+RG GP +S      R +   ++ +LPV VR  H+    G    
Sbjct: 87  LPNVVRRKARSFHRKAERGPGPRLSPEASFSRVLSQCNYDLLPVCVRGHHTDSDSGCIAW 146

Query: 121 PDEFLCLDALRAALAHLLLYLCGVQYLEP 150
            DE   +D +RAA+A+ LL+   +Q + P
Sbjct: 147 EDELPGVDVVRAAMAYFLLHCGRLQSMVP 175

[Close]

BLAST of Moc08g04160 vs. ExPASy TrEMBL
Match: A0A6A3CW85 (Putative ammonium transporter 4 member 1 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00002840pilonHSYRG01392 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 1.1e-11
Identity = 46/110 (41.82%), Postives = 62/110 (56.36%), Query Frame = 0


Query: 37  VGDQLGVHGAVRVRVRAGVLGRVGVPAVVWGQAGAVLGEAQRGAGPEVSAGPGLQRQVPL 96
           +G +   HGA+R  +R  +LG  G+P VVWG+ G+V+ E +RG G  V     +  +V  
Sbjct: 1   MGGEHCFHGALRFCMRRFLLGGFGLPVVVWGKDGSVMRETERGVGRCVPDRTTVSGEVSE 60

Query: 97  RDHGVLPVRVRRDHSGPHRGGSPGPDEFLCLDALRAALAHLLLYLCGVQY 147
           RD GV P   RRDHS   R    G DE LC+  +RAA+A + LY  G  Y
Sbjct: 61  RDDGVFPGNFRRDHSDSDRRSVVGADELLCMHDVRAAVADVFLYFHGSVY 110

[Close]

BLAST of Moc08g04160 vs. ExPASy TrEMBL
Match: A0A287LYS7 (Ammonium transporter OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 8.9e-09
Identity = 44/89 (49.44%), Postives = 58/89 (65.17%), Query Frame = 0


Query: 1  MDEQGRQRVADDGGDAGGAAERAGADNPVRRGGEEEVGDQLGVHGAVRVRVRAGVLGRVG 60
          M EQGRQR+ADD  DAGG AE A   +P+R+  EEEVG +LG+HGA+R+R R  +LG +G
Sbjct: 8  MAEQGRQRMADDRCDAGGIAEHARPGDPLRQHREEEVGRELGIHGALRLRRRVALLGHLG 67

Query: 61 VPAVVWGQAGAVLGEAQRGAGPEVSAGPG 90
          +  V+  QA  +LG+   GA   V    G
Sbjct: 68 LQHVLRPQAAPLLGQGPAGARAAVPPHAG 96

[Close]

BLAST of Moc08g04160 vs. ExPASy TrEMBL
Match: A0A453G0Z7 (Ammonium_transp domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 2.6e-08
Identity = 43/89 (48.31%), Postives = 57/89 (64.04%), Query Frame = 0


Query: 1  MDEQGRQRVADDGGDAGGAAERAGADNPVRRGGEEEVGDQLGVHGAVRVRVRAGVLGRVG 60
          M EQGRQR+ADD  DAGG +E A   +P+R+  EEEVG +LG+HG +R+R R  VLG +G
Sbjct: 9  MAEQGRQRMADDRRDAGGTSEHARPGDPLRQHREEEVGRELGLHGTLRLRRRVAVLGHLG 68

Query: 61 VPAVVWGQAGAVLGEAQRGAGPEVSAGPG 90
          +  V+   AG +LG+   GA   V    G
Sbjct: 69 LQHVLRPPAGPLLGQGPAGARAAVPPHAG 97

The following BLAST results are available for this feature:

BLAST of Moc08g04160 vs. NCBI nr


Match Name	E-value	Identity	Description
CAN75762.1	5.7e-18	42.95	hypothetical protein VITISV_034440 [Vitis vinifera]	[more]
KAE8731461.1	2.3e-11	41.82	putative ammonium transporter 4 member 1 [Hibiscus syriacus]	[more]
GFS38575.1	4.7e-04	41.86	ammonium transporter 2 [Actinidia rufa]	[more]

BLAST of Moc08g04160 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc08g04160 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6V7QYQ1	6.4e-23	51.41	Ammonium_transp domain-containing protein OS=Ananas comosus var. bracteatus OX=2...	[more]
A5AK92	2.8e-18	42.95	Ammonium_transp domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_0...	[more]
A0A6A3CW85	1.1e-11	41.82	Putative ammonium transporter 4 member 1 OS=Hibiscus syriacus OX=106335 GN=F3Y22...	[more]
A0A287LYS7	8.9e-09	49.44	Ammonium transporter OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1	[more]
A0A453G0Z7	2.6e-08	48.31	Ammonium_transp domain-containing protein OS=Aegilops tauschii subsp. strangulat...	[more]

BLAST of Moc08g04160 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..38

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc08g04160.1	Moc08g04160.1	mRNA