Moc08g03400 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc08g03400
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Reverse transcriptase
Location	chr8: 2476219 .. 2478144 (-)
RNA-Seq Expression	Moc08g03400
Synteny	Moc08g03400

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGAAAGGCCCAGTACTTGGGCTAGCCGACGTGACGAAGCCGTTTGAAGTAGAAACGGATGCTTCAGACTACGCTTTAGGTGGTGTCCTTCTCCAAGACGGTCACCCGATCACTTACGAAAGTCGCAAGCTGAATAATGCGGAACGACGTTATACCGTATCAGAGAAAGAAATGCTAGCAGTCGTTCACTGCCTCAGGTCTTGGAGGCAGTACTTGTTGGGCTCATATTTTGTGGTAAAGACGGACAACAGTGCAATTTGCCACTTCTTCAATCAGCCTAAGCTAACATCCAAACATGCCAGGTGGCAGGAATTGTTAGCCGAGTTTGATTTTAAGTTTGAACACAAGGCAGGAAAGTCCAACCAAGCTGCCGACGCTCTTAGCCGTAAAGAAGAACATGCGGCCCTGTGCATGTTAGCCCACATTCACACCAGCAAAGTGGACGGGTCGATCCGTGACCTCATTAGAGAATATCTTCAAAGAGACCCATTCGCCCGAACTGTGGTCGAGCTGGCTAAGACCGGGAAGACCTGCCAGTTCTGGGTTGAAGGGGACCTATTATTTACAAGAGGAAACAGACTGTACGTGCCAAGAACGGGAGACCTGAGAAAGAAGCTCCTACATGAGTGTCACGATACTCTATGGGCTGGTCACCCGGGGTGGCAACGGACTTACGCCTTGCTGAAAAAGGGGTACTTTTGGCCAAGTATGCGGGAAGATGTGATGCAATACACGAAGACCTGTCTTATCTGTCAGCAAGATAAGGTAGAAAGGACTAAAATAGCAGGGTTGCTTGAACCCCTACCAACTCCTACGAGACCATGGGAGAGTGTGTCGCTCGACTTCATCTCTCACTTGCCCAAGGTAGGAGAACATGAAGCCATTCTTGTCGTTATCGATCGATTTTCCAAATATGCAACTTGCATTCCGACTCCCAAGATGTGTTCCGCCGAGCTGACGGCGCAGTTGTTCTTTAAACATATAGTAAAACTATGGGGAGTTCCGACGAGCATCGTTAGCGACAGTGATGACCGATTTACAGGAACCTTCTGAACGAAACTTTTTTCTATTCTGGGTTCAAGCTTGAACATTTCCTCGAGTTATCACCCACAGACCGATGGTCAGACAGAGAGATTCAACAGCATGCTTGAGGAATACCTGCGTCACTTCATCAATGCCAGACAAAAGAACTGGGTCCAGCTGTTAGATATGGCTCAATTCTGTTTTAACGGCCAGACAAGTTCTTCAACAGGAAAGAGCCCCTTTGAGATTGTGTGCGGAAGACAGCCGTCTATGCCACATATTCTTGACCACCCGTATGCGGGGAAAAGTCCTCAAGCCCACAACTTCACAAAGGAATGGAAGCAGACGACAGAAATTGCTCGAGCATATTTGGAGAAAGCTTCCAAGCATATGAAGAAATGGGCCAACCGCAAGAGACGCCCTCTCGAATTTCGAGTAGGCGACAAAGTTCTTATCAAGCTGAGGCCAGAACAGATTCGTTTCCGAGGACGCAAAGACCAGAGACTCGTGAGAAAGTACGAGGGACCCGTGGAAGTCGTTAAGAAGGTGGGGAGTGTCTCGTATAAGGTGGTGTTACCAGCTTGGATGAAGATCCACCCGGTAATCCATGTGAGCAATTTAAAACCTTACCACCCCGACCTTGAGGATGACGAACGCAATGTTGTTGTGCGGCCCGCCATCGACTTCAAACGGAAGGAAGACAAAGAAGCAGAAGAGATCCTTGCAGAGAGAACCAGAAAGGTGGGGAGACCCGTTCGAAAAGTTCGAGAATTCCTCGTCAAATGGAAGGACCTACCTGATGCAGAGACCAGCTGGGAACGAGAAGAAGACCTTGAAGCCTGGAAGACGAAGATCGAGGACTTCAAGTTGCAGCAGTTGACAGGGACGTCAACCGTTTAA

mRNA sequence

ATGATGAAAGGCCCAGTACTTGGGCTAGCCGACGTGACGAAGCCGTTTGAAGTAGAAACGGATGCTTCAGACTACGCTTTAGGTGGTGTCCTTCTCCAAGACGGTCACCCGATCACTTACGAAAGTCGCAAGCTGAATAATGCGGAACGACGTTATACCGTATCAGAGAAAGAAATGCTAGCAGTCGTTCACTGCCTCAGGTCTTGGAGGCAGTACTTGTTGGGCTCATATTTTGTGGTAAAGACGGACAACAGTGCAATTTGCCACTTCTTCAATCAGCCTAAGCTAACATCCAAACATGCCAGGTGGCAGGAATTGTTAGCCGAGTTTGATTTTAAGTTTGAACACAAGGCAGGAAAGTCCAACCAAGCTGCCGACGCTCTTAGCCGTAAAGAAGAACATGCGGCCCTGTGCATGTTAGCCCACATTCACACCAGCAAAGTGGACGGGTCGATCCGTGACCTCATTAGAGAATATCTTCAAAGAGACCCATTCGCCCGAACTGTGGTCGAGCTGGCTAAGACCGGGAAGACCTGCCAGTTCTGGGTTGAAGGGGACCTATTATTTACAAGAGGAAACAGACTACAAAAGAACTGGGTCCAGCTGTTAGATATGGCTCAATTCTGTTTTAACGGCCAGACAAGTTCTTCAACAGGAAAGAGCCCCTTTGAGATTGTGTGCGGAAGACAGCCGTCTATGCCACATATTCTTGACCACCCGTATGCGGGGAAAAGTCCTCAAGCCCACAACTTCACAAAGGAATGGAAGCAGACGACAGAAATTGCTCGAGCATATTTGGAGAAAGCTTCCAAGCATATGAAGAAATGGGCCAACCGCAAGAGACGCCCTCTCGAATTTCGAGTAGGCGACAAAGTTCTTATCAAGCTGAGGCCAGAACAGATTCGTTTCCGAGGACGCAAAGACCAGAGACTCGTGAGAAAGTACGAGGGACCCGTGGAAGTCGTTAAGAAGGTGGGGAGTGTCTCGTATAAGGTGGTGTTACCAGCTTGGATGAAGATCCACCCGGTAATCCATGTGAGCAATTTAAAACCTTACCACCCCGACCTTGAGGATGACGAACGCAATGTTGTTGTGCGGCCCGCCATCGACTTCAAACGGAAGGAAGACAAAGAAGCAGAAGAGATCCTTGCAGAGAGAACCAGAAAGGTGGGGAGACCCGTTCGAAAAGTTCGAGAATTCCTCGTCAAATGGAAGGACCTACCTGATGCAGAGACCAGCTGGGAACGAGAAGAAGACCTTGAAGCCTGGAAGACGAAGATCGAGGACTTCAAGTTGCAGCAGTTGACAGGGACGTCAACCGTTTAA

Coding sequence (CDS)

ATGATGAAAGGCCCAGTACTTGGGCTAGCCGACGTGACGAAGCCGTTTGAAGTAGAAACGGATGCTTCAGACTACGCTTTAGGTGGTGTCCTTCTCCAAGACGGTCACCCGATCACTTACGAAAGTCGCAAGCTGAATAATGCGGAACGACGTTATACCGTATCAGAGAAAGAAATGCTAGCAGTCGTTCACTGCCTCAGGTCTTGGAGGCAGTACTTGTTGGGCTCATATTTTGTGGTAAAGACGGACAACAGTGCAATTTGCCACTTCTTCAATCAGCCTAAGCTAACATCCAAACATGCCAGGTGGCAGGAATTGTTAGCCGAGTTTGATTTTAAGTTTGAACACAAGGCAGGAAAGTCCAACCAAGCTGCCGACGCTCTTAGCCGTAAAGAAGAACATGCGGCCCTGTGCATGTTAGCCCACATTCACACCAGCAAAGTGGACGGGTCGATCCGTGACCTCATTAGAGAATATCTTCAAAGAGACCCATTCGCCCGAACTGTGGTCGAGCTGGCTAAGACCGGGAAGACCTGCCAGTTCTGGGTTGAAGGGGACCTATTATTTACAAGAGGAAACAGACTACAAAAGAACTGGGTCCAGCTGTTAGATATGGCTCAATTCTGTTTTAACGGCCAGACAAGTTCTTCAACAGGAAAGAGCCCCTTTGAGATTGTGTGCGGAAGACAGCCGTCTATGCCACATATTCTTGACCACCCGTATGCGGGGAAAAGTCCTCAAGCCCACAACTTCACAAAGGAATGGAAGCAGACGACAGAAATTGCTCGAGCATATTTGGAGAAAGCTTCCAAGCATATGAAGAAATGGGCCAACCGCAAGAGACGCCCTCTCGAATTTCGAGTAGGCGACAAAGTTCTTATCAAGCTGAGGCCAGAACAGATTCGTTTCCGAGGACGCAAAGACCAGAGACTCGTGAGAAAGTACGAGGGACCCGTGGAAGTCGTTAAGAAGGTGGGGAGTGTCTCGTATAAGGTGGTGTTACCAGCTTGGATGAAGATCCACCCGGTAATCCATGTGAGCAATTTAAAACCTTACCACCCCGACCTTGAGGATGACGAACGCAATGTTGTTGTGCGGCCCGCCATCGACTTCAAACGGAAGGAAGACAAAGAAGCAGAAGAGATCCTTGCAGAGAGAACCAGAAAGGTGGGGAGACCCGTTCGAAAAGTTCGAGAATTCCTCGTCAAATGGAAGGACCTACCTGATGCAGAGACCAGCTGGGAACGAGAAGAAGACCTTGAAGCCTGGAAGACGAAGATCGAGGACTTCAAGTTGCAGCAGTTGACAGGGACGTCAACCGTTTAA

Protein sequence

MMKGPVLGLADVTKPFEVETDASDYALGGVLLQDGHPITYESRKLNNAERRYTVSEKEMLAVVHCLRSWRQYLLGSYFVVKTDNSAICHFFNQPKLTSKHARWQELLAEFDFKFEHKAGKSNQAADALSRKEEHAALCMLAHIHTSKVDGSIRDLIREYLQRDPFARTVVELAKTGKTCQFWVEGDLLFTRGNRLQKNWVQLLDMAQFCFNGQTSSSTGKSPFEIVCGRQPSMPHILDHPYAGKSPQAHNFTKEWKQTTEIARAYLEKASKHMKKWANRKRRPLEFRVGDKVLIKLRPEQIRFRGRKDQRLVRKYEGPVEVVKKVGSVSYKVVLPAWMKIHPVIHVSNLKPYHPDLEDDERNVVVRPAIDFKRKEDKEAEEILAERTRKVGRPVRKVREFLVKWKDLPDAETSWEREEDLEAWKTKIEDFKLQQLTGTSTV

Homology

[Close]

BLAST of Moc08g03400 vs. NCBI nr
Match: KAA0032849.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 642.9 bits (1657), Expect = 2.0e-180
Identity = 347/641 (54.13%), Postives = 393/641 (61.31%), Query Frame = 0


Query: 1    MMKGPVLGLADVTKPFEVETDASDYALGGVLLQDGHPITYESRKLNNAERRYTVSEKEML 60
            +M+GP+LG+ADVTKPFEVETDASDYALGGVLLQ+GHPI YESRKLN AERRYTVSEKEML
Sbjct: 947  LMEGPLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAERRYTVSEKEML 1006

Query: 61   AVVHCLRSWRQYLLGSYFVVKTDNSAICHFFNQPKLTSKHARWQELLAEFDFKFEHKAGK 120
            AVVHCLR+WRQYLLGS FVVKTDNSA CHFF QPKLTSK ARWQE LAEFDF+FEHK G 
Sbjct: 1007 AVVHCLRAWRQYLLGSSFVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKKGS 1066

Query: 121  SNQAADALSRKEEHAALCMLAHIHTSKVDGSIRDLIREYLQRDPFARTVVELAKTGKTCQ 180
            SNQAADALSRK+EHAA+C+LAH+  S++ GS+RD +RE+LQ+D  A+ V+ LAK GKT Q
Sbjct: 1067 SNQAADALSRKQEHAAICLLAHLQGSEIGGSVRDTLREFLQKDHAAQNVMNLAKAGKTRQ 1126

Query: 181  FWVEGDLLFTRGNRL--------------------------------------------- 240
            FWVE DLL T+GNRL                                             
Sbjct: 1127 FWVEEDLLVTKGNRLYVPRAGGLRKKLLYECHDTLWAGHPGWQRTYALLKKGYFWPNMRD 1186

Query: 241  ------------------------------------------------------------ 300
                                                                        
Sbjct: 1187 DVMQYTKTCLICQQDKVEKVKVAGLLDPLPVPTRPWESVSMDFITHLPKVGDFEAILVII 1246

Query: 301  ------------------------------------------------------------ 360
                                                                        
Sbjct: 1247 DRFSKYATFIPATKQCSAETTAQLFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSFLG 1306

Query: 361  -----------------------------------QKNWVQLLDMAQFCFNGQTSSSTGK 420
                                               QKNWVQLLD+AQFCFN QTSSSTG+
Sbjct: 1307 TSLNISSSYHPQTDGQTERFNSMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSSTGR 1366

Query: 421  SPFEIVCGRQPSMPHILDHPYAGKSPQAHNFTKEWKQTTEIARAYLEKASKHMKKWANRK 442
            SPFEIV GRQP +PH++DHP+AGK+PQA NFTKEW+QT +IARAYLEKASK MKKWA++K
Sbjct: 1367 SPFEIVSGRQPVLPHLVDHPFAGKNPQALNFTKEWRQTNDIARAYLEKASKRMKKWADKK 1426

[Close]

BLAST of Moc08g03400 vs. NCBI nr
Match: KAA0036830.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 642.1 bits (1655), Expect = 3.5e-180
Identity = 347/641 (54.13%), Postives = 393/641 (61.31%), Query Frame = 0


Query: 1    MMKGPVLGLADVTKPFEVETDASDYALGGVLLQDGHPITYESRKLNNAERRYTVSEKEML 60
            +M+GP+LG+ADVTKPFEVETDASDYALGGVLLQ+GHPI YESRKLN AERRYTVSEKEML
Sbjct: 947  LMEGPLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAERRYTVSEKEML 1006

Query: 61   AVVHCLRSWRQYLLGSYFVVKTDNSAICHFFNQPKLTSKHARWQELLAEFDFKFEHKAGK 120
            AVVHCLR+WRQYLLGS FVVKTDNSA CHFF QPKLTSK ARWQE LAEFDF+FEHK G 
Sbjct: 1007 AVVHCLRAWRQYLLGSSFVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKKGS 1066

Query: 121  SNQAADALSRKEEHAALCMLAHIHTSKVDGSIRDLIREYLQRDPFARTVVELAKTGKTCQ 180
            SNQAADALSRK+EHAA+C+LAH+  S++ GSIRD +RE+LQ+D  A+ V+ LAK GKT Q
Sbjct: 1067 SNQAADALSRKQEHAAICLLAHLQGSEIGGSIRDTLREFLQKDHAAQNVMNLAKAGKTRQ 1126

Query: 181  FWVEGDLLFTRGNRL--------------------------------------------- 240
            FWVE DLL T+GNRL                                             
Sbjct: 1127 FWVEEDLLVTKGNRLYVPRAGGLRKKLLYECHDTLWAGHPGWQRTYALLKKGYFWPNMRD 1186

Query: 241  ------------------------------------------------------------ 300
                                                                        
Sbjct: 1187 DVMQYTKTCLICQQDKVEKVTVAGLLDPLPVPTRPWESVSMDFITHLPKVGDFEAILVII 1246

Query: 301  ------------------------------------------------------------ 360
                                                                        
Sbjct: 1247 DRFSKYATFIPATKQCSAETTAQLFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSFLG 1306

Query: 361  -----------------------------------QKNWVQLLDMAQFCFNGQTSSSTGK 420
                                               QKNWVQLLD+AQFCFN QTSSSTG+
Sbjct: 1307 TSLNISSSYHPQTDGQTERFNSMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSSTGR 1366

Query: 421  SPFEIVCGRQPSMPHILDHPYAGKSPQAHNFTKEWKQTTEIARAYLEKASKHMKKWANRK 442
            SPFEIV GRQP +PH++DHP+AGK+PQA NFTKEW+QT +IARAYLEKASK MKKWA++K
Sbjct: 1367 SPFEIVSGRQPVLPHLVDHPFAGKNPQALNFTKEWRQTNDIARAYLEKASKRMKKWADKK 1426

[Close]

BLAST of Moc08g03400 vs. NCBI nr
Match: KAA0067557.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 641.7 bits (1654), Expect = 4.5e-180
Identity = 346/641 (53.98%), Postives = 393/641 (61.31%), Query Frame = 0


Query: 1    MMKGPVLGLADVTKPFEVETDASDYALGGVLLQDGHPITYESRKLNNAERRYTVSEKEML 60
            +M+GP+LG+ADVTKPFEVETDASDYALGGVLLQ+GHPI YESRKLN AERRYTVSEKEML
Sbjct: 943  LMEGPLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAERRYTVSEKEML 1002

Query: 61   AVVHCLRSWRQYLLGSYFVVKTDNSAICHFFNQPKLTSKHARWQELLAEFDFKFEHKAGK 120
            AVVHCLR+WRQYLLGS FVVKTDNSA CHFF QPKLTSK ARWQE LAEFDF+FEHK G 
Sbjct: 1003 AVVHCLRAWRQYLLGSSFVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKKGS 1062

Query: 121  SNQAADALSRKEEHAALCMLAHIHTSKVDGSIRDLIREYLQRDPFARTVVELAKTGKTCQ 180
            SNQAADALSRK+EHAA+C+LAH+  S++ GS+RD +RE+LQ+D  A+ V+ LAK GKT Q
Sbjct: 1063 SNQAADALSRKQEHAAICLLAHLQGSEIGGSVRDTLREFLQKDHAAQNVMNLAKAGKTRQ 1122

Query: 181  FWVEGDLLFTRGNRL--------------------------------------------- 240
            FWVE DLL T+GNRL                                             
Sbjct: 1123 FWVEEDLLVTKGNRLYVPRAGGLRKKLLYECHDTLWAGHPGWQRTYALLKKGYFWPNMRD 1182

Query: 241  ------------------------------------------------------------ 300
                                                                        
Sbjct: 1183 DVMQYTKTCLICQQDKVEKVKVAGLLDPLPVPTRPWESVSMDFITHLPKVGDFEAILVII 1242

Query: 301  ------------------------------------------------------------ 360
                                                                        
Sbjct: 1243 DRFSKYATFIPATKQCSAETTAQLFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSFLG 1302

Query: 361  -----------------------------------QKNWVQLLDMAQFCFNGQTSSSTGK 420
                                               QKNWVQLLD+AQFCFN QTSSSTG+
Sbjct: 1303 TSLNISSSYHPQTDGQTERFNSMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSSTGR 1362

Query: 421  SPFEIVCGRQPSMPHILDHPYAGKSPQAHNFTKEWKQTTEIARAYLEKASKHMKKWANRK 442
            SPFEIV GRQP +PH++DHP+AGK+PQA NFTKEW+QT +IARAYLEKASK MKKWA++K
Sbjct: 1363 SPFEIVSGRQPVLPHLVDHPFAGKNPQALNFTKEWRQTNDIARAYLEKASKRMKKWADKK 1422

[Close]

BLAST of Moc08g03400 vs. NCBI nr
Match: KAA0037220.1 (reverse transcriptase [Cucumis melo var. makuwa] >TYJ95897.1 reverse transcriptase [Cucumis melo var. makuwa] >TYJ99001.1 reverse transcriptase [Cucumis melo var. makuwa] >TYK01698.1 reverse transcriptase [Cucumis melo var. makuwa] >TYK02882.1 reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 641.7 bits (1654), Expect = 4.5e-180
Identity = 346/641 (53.98%), Postives = 393/641 (61.31%), Query Frame = 0


Query: 1    MMKGPVLGLADVTKPFEVETDASDYALGGVLLQDGHPITYESRKLNNAERRYTVSEKEML 60
            +M+GP+LG+ADVTKPFEVETDASDYALGGVLLQ+GHPI YESRKLN AERRYTVSEKEML
Sbjct: 947  LMEGPLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAERRYTVSEKEML 1006

Query: 61   AVVHCLRSWRQYLLGSYFVVKTDNSAICHFFNQPKLTSKHARWQELLAEFDFKFEHKAGK 120
            AVVHCLR+WRQYLLGS FVVKTDNSA CHFF QPKLTSK ARWQE LAEFDF+FEHK G 
Sbjct: 1007 AVVHCLRAWRQYLLGSSFVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKKGS 1066

Query: 121  SNQAADALSRKEEHAALCMLAHIHTSKVDGSIRDLIREYLQRDPFARTVVELAKTGKTCQ 180
            SNQAADALSRK+EHAA+C+LAH+  S++ GS+RD +RE+LQ+D  A+ V+ LAK GKT Q
Sbjct: 1067 SNQAADALSRKQEHAAICLLAHLQGSEIGGSVRDTLREFLQKDHAAQNVMNLAKAGKTRQ 1126

Query: 181  FWVEGDLLFTRGNRL--------------------------------------------- 240
            FWVE DLL T+GNRL                                             
Sbjct: 1127 FWVEEDLLVTKGNRLYVPRAGGLRKKLLYECHDTLWAGHPGWQRTYALLKKGYFWPNMRD 1186

Query: 241  ------------------------------------------------------------ 300
                                                                        
Sbjct: 1187 DVMQYTKTCLICQQDKVEKVKVAGLLDPLPVPTRPWESVSMDFITHLPKVGDFEAILVII 1246

Query: 301  ------------------------------------------------------------ 360
                                                                        
Sbjct: 1247 DRFSKYATFIPATKQCSAETTAQLFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSFLG 1306

Query: 361  -----------------------------------QKNWVQLLDMAQFCFNGQTSSSTGK 420
                                               QKNWVQLLD+AQFCFN QTSSSTG+
Sbjct: 1307 TSLNISSSYHPQTDGQTERFNSMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSSTGR 1366

Query: 421  SPFEIVCGRQPSMPHILDHPYAGKSPQAHNFTKEWKQTTEIARAYLEKASKHMKKWANRK 442
            SPFEIV GRQP +PH++DHP+AGK+PQA NFTKEW+QT +IARAYLEKASK MKKWA++K
Sbjct: 1367 SPFEIVSGRQPVLPHLVDHPFAGKNPQALNFTKEWRQTNDIARAYLEKASKRMKKWADKK 1426

[Close]

BLAST of Moc08g03400 vs. NCBI nr
Match: TYK28713.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 641.7 bits (1654), Expect = 4.5e-180
Identity = 346/641 (53.98%), Postives = 393/641 (61.31%), Query Frame = 0


Query: 1    MMKGPVLGLADVTKPFEVETDASDYALGGVLLQDGHPITYESRKLNNAERRYTVSEKEML 60
            +M+GP+LG+ADVTKPFEVETDASDYALGGVLLQ+GHPI YESRKLN AERRYTVSEKEML
Sbjct: 947  LMEGPLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAERRYTVSEKEML 1006

Query: 61   AVVHCLRSWRQYLLGSYFVVKTDNSAICHFFNQPKLTSKHARWQELLAEFDFKFEHKAGK 120
            AVVHCLR+WRQYLLGS FVVKTDNSA CHFF QPKLTSK ARWQE LAEFDF+FEHK G 
Sbjct: 1007 AVVHCLRAWRQYLLGSSFVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKKGS 1066

Query: 121  SNQAADALSRKEEHAALCMLAHIHTSKVDGSIRDLIREYLQRDPFARTVVELAKTGKTCQ 180
            SNQAADALSRK+EHAA+C+LAH+  S++ GS+RD +RE+LQ+D  A+ V+ LAK GKT Q
Sbjct: 1067 SNQAADALSRKQEHAAICLLAHLQGSEIGGSVRDTLREFLQKDHAAQNVMNLAKAGKTRQ 1126

Query: 181  FWVEGDLLFTRGNRL--------------------------------------------- 240
            FWVE DLL T+GNRL                                             
Sbjct: 1127 FWVEEDLLVTKGNRLYVPRAGGLRKKLLYECHDTLWAGHPGWQRTYALLKKGYFWPNMRD 1186

Query: 241  ------------------------------------------------------------ 300
                                                                        
Sbjct: 1187 DVMQYTKTCLICQQDKVEKVKVAGLLDPLPVPTRPWESVSMDFITHLPKVGDFEAILVII 1246

Query: 301  ------------------------------------------------------------ 360
                                                                        
Sbjct: 1247 DRFSKYATFIPATKQCSAETTAQLFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSFLG 1306

Query: 361  -----------------------------------QKNWVQLLDMAQFCFNGQTSSSTGK 420
                                               QKNWVQLLD+AQFCFN QTSSSTG+
Sbjct: 1307 TSLNISSSYHPQTDGQTERFNSMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSSTGR 1366

Query: 421  SPFEIVCGRQPSMPHILDHPYAGKSPQAHNFTKEWKQTTEIARAYLEKASKHMKKWANRK 442
            SPFEIV GRQP +PH++DHP+AGK+PQA NFTKEW+QT +IARAYLEKASK MKKWA++K
Sbjct: 1367 SPFEIVSGRQPVLPHLVDHPFAGKNPQALNFTKEWRQTNDIARAYLEKASKRMKKWADKK 1426

[Close]

BLAST of Moc08g03400 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 4.6e-26
Identity = 65/152 (42.76%), Postives = 90/152 (59.21%), Query Frame = 0


Query: 5   PVLGLADVTKPFEVETDASDYALGGVLLQDGHPITYESRKLNNAERRYTVSEKEMLAVVH 64
           P+L + D TK F + TDASD ALG VL QDGHP++Y SR LN  E  Y+  EKE+LA+V 
Sbjct: 498 PILKVPDFTKKFTLTTDASDVALGAVLSQDGHPLSYISRTLNEHEINYSTIEKELLAIVW 557

Query: 65  CLRSWRQYLLGSYFVVKTDNSAICHFFNQPKLTSKHARWQELLAEFDFKFEHKAGKSNQA 124
             +++R YLLG +F + +D+  +   +      SK  RW+  L+EFDF  ++  GK N  
Sbjct: 558 ATKTFRHYLLGRHFEISSDHQPLSWLYRMKDPNSKLTRWRVKLSEFDFDIKYIKGKENCV 617

Query: 125 ADALSRKEEHAALCMLAHIHTSKVDGSIRDLI 157
           ADALSR +           H+++ D S  DLI
Sbjct: 618 ADALSRIKLEETYLSEQTQHSAEEDNS--DLI 647

[Close]

BLAST of Moc08g03400 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 7.4e-24
Identity = 56/130 (43.08%), Postives = 84/130 (64.62%), Query Frame = 0


Query: 1   MMKGPVLGLADVTKPFEVETDASDYALGGVLLQDGHPITYESRKLNNAERRYTVSEKEML 60
           +++ P+L L D  K F + TDAS+ ALG VL Q+GHPI++ SR LN+ E  Y+  EKE+L
Sbjct: 493 IIRDPILQLPDFEKKFVLTTDASNLALGAVLSQNGHPISFISRTLNDHELNYSAIEKELL 552

Query: 61  AVVHCLRSWRQYLLGSYFVVKTDNSAICHFFNQPKLTSKHARWQELLAEFDFKFEHKAGK 120
           A+V   +++R YLLG  F++ +D+  +    N  +  +K  RW+  L+E+ FK ++  GK
Sbjct: 553 AIVWATKTFRHYLLGRQFLIASDHQPLRWLHNLKEPGAKLERWRVRLSEYQFKIDYIKGK 612

Query: 121 SNQAADALSR 131
            N  ADALSR
Sbjct: 613 ENSVADALSR 622

[Close]

BLAST of Moc08g03400 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 7.9e-18
Identity = 53/130 (40.77%), Postives = 72/130 (55.38%), Query Frame = 0


Query: 6   VLGLADVTKPFEVETDASDYALGGVLLQD----GHPITYESRKLNNAERRYTVSEKEMLA 65
           +L     TKPF + TDAS++A+G VL QD      PI Y SR LN  E  Y   EKEMLA
Sbjct: 425 ILAFPCFTKPFHLTTDASNWAIGAVLSQDDQGRDRPIAYISRSLNKTEENYATIEKEMLA 484

Query: 66  VVHCLRSWRQYLLGSYFV-VKTDNSAICHFFNQPKLTSKHARWQELLAEFDFKFEHKAGK 125
           ++  L + R YL G+  + V TD+  +          +K  RW+  + E++ +  +K GK
Sbjct: 485 IIWSLDNLRAYLYGAGTIKVYTDHQPLTFALGNRNFNAKLKRWKARIEEYNCELIYKPGK 544

Query: 126 SNQAADALSR 131
           SN  ADALSR
Sbjct: 545 SNVVADALSR 554

[Close]

BLAST of Moc08g03400 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 1.0e-17
Identity = 55/139 (39.57%), Postives = 83/139 (59.71%), Query Frame = 0


Query: 1   MMKGPVLGLADVTKPFEVETDASDYALGGVLLQDG-----HPITYESRKLNNAERRYTVS 60
           ++  PVL   D +K   +ETDASD A+G VL Q       +P+ Y S K++ A+  Y+VS
Sbjct: 693 LVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVS 752

Query: 61  EKEMLAVVHCLRSWRQYLLGSY--FVVKTDN-SAICHFFNQPKLTSKH-ARWQELLAEFD 120
           +KEMLA++  L+ WR YL  +   F + TD+ + I    N+ +  +K  ARWQ  L +F+
Sbjct: 753 DKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFN 812

Query: 121 FKFEHKAGKSNQAADALSR 131
           F+  ++ G +N  ADALSR
Sbjct: 813 FEINYRPGSANHIADALSR 831

[Close]

BLAST of Moc08g03400 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 1.0e-17
Identity = 55/139 (39.57%), Postives = 83/139 (59.71%), Query Frame = 0


Query: 1   MMKGPVLGLADVTKPFEVETDASDYALGGVLLQDG-----HPITYESRKLNNAERRYTVS 60
           ++  PVL   D +K   +ETDASD A+G VL Q       +P+ Y S K++ A+  Y+VS
Sbjct: 693 LVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVS 752

Query: 61  EKEMLAVVHCLRSWRQYLLGSY--FVVKTDN-SAICHFFNQPKLTSKH-ARWQELLAEFD 120
           +KEMLA++  L+ WR YL  +   F + TD+ + I    N+ +  +K  ARWQ  L +F+
Sbjct: 753 DKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFN 812

Query: 121 FKFEHKAGKSNQAADALSR 131
           F+  ++ G +N  ADALSR
Sbjct: 813 FEINYRPGSANHIADALSR 831

[Close]

BLAST of Moc08g03400 vs. ExPASy TrEMBL
Match: A0A5A7SUK4 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold81G00100 PE=4 SV=1)

HSP 1 Score: 642.9 bits (1657), Expect = 9.9e-181
Identity = 347/641 (54.13%), Postives = 393/641 (61.31%), Query Frame = 0


Query: 1    MMKGPVLGLADVTKPFEVETDASDYALGGVLLQDGHPITYESRKLNNAERRYTVSEKEML 60
            +M+GP+LG+ADVTKPFEVETDASDYALGGVLLQ+GHPI YESRKLN AERRYTVSEKEML
Sbjct: 947  LMEGPLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAERRYTVSEKEML 1006

Query: 61   AVVHCLRSWRQYLLGSYFVVKTDNSAICHFFNQPKLTSKHARWQELLAEFDFKFEHKAGK 120
            AVVHCLR+WRQYLLGS FVVKTDNSA CHFF QPKLTSK ARWQE LAEFDF+FEHK G 
Sbjct: 1007 AVVHCLRAWRQYLLGSSFVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKKGS 1066

Query: 121  SNQAADALSRKEEHAALCMLAHIHTSKVDGSIRDLIREYLQRDPFARTVVELAKTGKTCQ 180
            SNQAADALSRK+EHAA+C+LAH+  S++ GS+RD +RE+LQ+D  A+ V+ LAK GKT Q
Sbjct: 1067 SNQAADALSRKQEHAAICLLAHLQGSEIGGSVRDTLREFLQKDHAAQNVMNLAKAGKTRQ 1126

Query: 181  FWVEGDLLFTRGNRL--------------------------------------------- 240
            FWVE DLL T+GNRL                                             
Sbjct: 1127 FWVEEDLLVTKGNRLYVPRAGGLRKKLLYECHDTLWAGHPGWQRTYALLKKGYFWPNMRD 1186

Query: 241  ------------------------------------------------------------ 300
                                                                        
Sbjct: 1187 DVMQYTKTCLICQQDKVEKVKVAGLLDPLPVPTRPWESVSMDFITHLPKVGDFEAILVII 1246

Query: 301  ------------------------------------------------------------ 360
                                                                        
Sbjct: 1247 DRFSKYATFIPATKQCSAETTAQLFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSFLG 1306

Query: 361  -----------------------------------QKNWVQLLDMAQFCFNGQTSSSTGK 420
                                               QKNWVQLLD+AQFCFN QTSSSTG+
Sbjct: 1307 TSLNISSSYHPQTDGQTERFNSMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSSTGR 1366

Query: 421  SPFEIVCGRQPSMPHILDHPYAGKSPQAHNFTKEWKQTTEIARAYLEKASKHMKKWANRK 442
            SPFEIV GRQP +PH++DHP+AGK+PQA NFTKEW+QT +IARAYLEKASK MKKWA++K
Sbjct: 1367 SPFEIVSGRQPVLPHLVDHPFAGKNPQALNFTKEWRQTNDIARAYLEKASKRMKKWADKK 1426

[Close]

BLAST of Moc08g03400 vs. ExPASy TrEMBL
Match: A0A5A7T0E2 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold20G001310 PE=4 SV=1)

HSP 1 Score: 642.1 bits (1655), Expect = 1.7e-180
Identity = 347/641 (54.13%), Postives = 393/641 (61.31%), Query Frame = 0


Query: 1    MMKGPVLGLADVTKPFEVETDASDYALGGVLLQDGHPITYESRKLNNAERRYTVSEKEML 60
            +M+GP+LG+ADVTKPFEVETDASDYALGGVLLQ+GHPI YESRKLN AERRYTVSEKEML
Sbjct: 947  LMEGPLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAERRYTVSEKEML 1006

Query: 61   AVVHCLRSWRQYLLGSYFVVKTDNSAICHFFNQPKLTSKHARWQELLAEFDFKFEHKAGK 120
            AVVHCLR+WRQYLLGS FVVKTDNSA CHFF QPKLTSK ARWQE LAEFDF+FEHK G 
Sbjct: 1007 AVVHCLRAWRQYLLGSSFVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKKGS 1066

Query: 121  SNQAADALSRKEEHAALCMLAHIHTSKVDGSIRDLIREYLQRDPFARTVVELAKTGKTCQ 180
            SNQAADALSRK+EHAA+C+LAH+  S++ GSIRD +RE+LQ+D  A+ V+ LAK GKT Q
Sbjct: 1067 SNQAADALSRKQEHAAICLLAHLQGSEIGGSIRDTLREFLQKDHAAQNVMNLAKAGKTRQ 1126

Query: 181  FWVEGDLLFTRGNRL--------------------------------------------- 240
            FWVE DLL T+GNRL                                             
Sbjct: 1127 FWVEEDLLVTKGNRLYVPRAGGLRKKLLYECHDTLWAGHPGWQRTYALLKKGYFWPNMRD 1186

Query: 241  ------------------------------------------------------------ 300
                                                                        
Sbjct: 1187 DVMQYTKTCLICQQDKVEKVTVAGLLDPLPVPTRPWESVSMDFITHLPKVGDFEAILVII 1246

Query: 301  ------------------------------------------------------------ 360
                                                                        
Sbjct: 1247 DRFSKYATFIPATKQCSAETTAQLFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSFLG 1306

Query: 361  -----------------------------------QKNWVQLLDMAQFCFNGQTSSSTGK 420
                                               QKNWVQLLD+AQFCFN QTSSSTG+
Sbjct: 1307 TSLNISSSYHPQTDGQTERFNSMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSSTGR 1366

Query: 421  SPFEIVCGRQPSMPHILDHPYAGKSPQAHNFTKEWKQTTEIARAYLEKASKHMKKWANRK 442
            SPFEIV GRQP +PH++DHP+AGK+PQA NFTKEW+QT +IARAYLEKASK MKKWA++K
Sbjct: 1367 SPFEIVSGRQPVLPHLVDHPFAGKNPQALNFTKEWRQTNDIARAYLEKASKRMKKWADKK 1426

[Close]

BLAST of Moc08g03400 vs. ExPASy TrEMBL
Match: A0A5D3C4R1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001990 PE=4 SV=1)

HSP 1 Score: 641.7 bits (1654), Expect = 2.2e-180
Identity = 346/641 (53.98%), Postives = 393/641 (61.31%), Query Frame = 0


Query: 1    MMKGPVLGLADVTKPFEVETDASDYALGGVLLQDGHPITYESRKLNNAERRYTVSEKEML 60
            +M+GP+LG+ADVTKPFEVETDASDYALGGVLLQ+GHPI YESRKLN AERRYTVSEKEML
Sbjct: 947  LMEGPLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAERRYTVSEKEML 1006

Query: 61   AVVHCLRSWRQYLLGSYFVVKTDNSAICHFFNQPKLTSKHARWQELLAEFDFKFEHKAGK 120
            AVVHCLR+WRQYLLGS FVVKTDNSA CHFF QPKLTSK ARWQE LAEFDF+FEHK G 
Sbjct: 1007 AVVHCLRAWRQYLLGSSFVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKKGS 1066

Query: 121  SNQAADALSRKEEHAALCMLAHIHTSKVDGSIRDLIREYLQRDPFARTVVELAKTGKTCQ 180
            SNQAADALSRK+EHAA+C+LAH+  S++ GS+RD +RE+LQ+D  A+ V+ LAK GKT Q
Sbjct: 1067 SNQAADALSRKQEHAAICLLAHLQGSEIGGSVRDTLREFLQKDHAAQNVMNLAKAGKTRQ 1126

Query: 181  FWVEGDLLFTRGNRL--------------------------------------------- 240
            FWVE DLL T+GNRL                                             
Sbjct: 1127 FWVEEDLLVTKGNRLYVPRAGGLRKKLLYECHDTLWAGHPGWQRTYALLKKGYFWPNMRD 1186

Query: 241  ------------------------------------------------------------ 300
                                                                        
Sbjct: 1187 DVMQYTKTCLICQQDKVEKVKVAGLLDPLPVPTRPWESVSMDFITHLPKVGDFEAILVII 1246

Query: 301  ------------------------------------------------------------ 360
                                                                        
Sbjct: 1247 DRFSKYATFIPATKQCSAETTAQLFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSFLG 1306

Query: 361  -----------------------------------QKNWVQLLDMAQFCFNGQTSSSTGK 420
                                               QKNWVQLLD+AQFCFN QTSSSTG+
Sbjct: 1307 TSLNISSSYHPQTDGQTERFNSMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSSTGR 1366

Query: 421  SPFEIVCGRQPSMPHILDHPYAGKSPQAHNFTKEWKQTTEIARAYLEKASKHMKKWANRK 442
            SPFEIV GRQP +PH++DHP+AGK+PQA NFTKEW+QT +IARAYLEKASK MKKWA++K
Sbjct: 1367 SPFEIVSGRQPVLPHLVDHPFAGKNPQALNFTKEWRQTNDIARAYLEKASKRMKKWADKK 1426

[Close]

BLAST of Moc08g03400 vs. ExPASy TrEMBL
Match: A0A5A7UXR6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G005550 PE=4 SV=1)

HSP 1 Score: 641.7 bits (1654), Expect = 2.2e-180
Identity = 346/641 (53.98%), Postives = 393/641 (61.31%), Query Frame = 0


Query: 1    MMKGPVLGLADVTKPFEVETDASDYALGGVLLQDGHPITYESRKLNNAERRYTVSEKEML 60
            +M+GP+LG+ADVTKPFEVETDASDYALGGVLLQ+GHPI YESRKLN AERRYTVSEKEML
Sbjct: 947  LMEGPLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAERRYTVSEKEML 1006

Query: 61   AVVHCLRSWRQYLLGSYFVVKTDNSAICHFFNQPKLTSKHARWQELLAEFDFKFEHKAGK 120
            AVVHCLR+WRQYLLGS FVVKTDNSA CHFF QPKLTSK ARWQE LAEFDF+FEHK G 
Sbjct: 1007 AVVHCLRAWRQYLLGSSFVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKKGS 1066

Query: 121  SNQAADALSRKEEHAALCMLAHIHTSKVDGSIRDLIREYLQRDPFARTVVELAKTGKTCQ 180
            SNQAADALSRK+EHAA+C+LAH+  S++ GS+RD +RE+LQ+D  A+ V+ LAK GKT Q
Sbjct: 1067 SNQAADALSRKQEHAAICLLAHLQGSEIGGSVRDTLREFLQKDHAAQNVMNLAKAGKTRQ 1126

Query: 181  FWVEGDLLFTRGNRL--------------------------------------------- 240
            FWVE DLL T+GNRL                                             
Sbjct: 1127 FWVEEDLLVTKGNRLYVPRAGGLRKKLLYECHDTLWAGHPGWQRTYALLKKGYFWPNMRD 1186

Query: 241  ------------------------------------------------------------ 300
                                                                        
Sbjct: 1187 DVMQYTKTCLICQQDKVEKVKVAGLLDPLPVPTRPWESVSMDFITHLPKVGDFEAILVII 1246

Query: 301  ------------------------------------------------------------ 360
                                                                        
Sbjct: 1247 DRFSKYATFIPATKQCSAETTAQLFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSFLG 1306

Query: 361  -----------------------------------QKNWVQLLDMAQFCFNGQTSSSTGK 420
                                               QKNWVQLLD+AQFCFN QTSSSTG+
Sbjct: 1307 TSLNISSSYHPQTDGQTERFNSMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSSTGR 1366

Query: 421  SPFEIVCGRQPSMPHILDHPYAGKSPQAHNFTKEWKQTTEIARAYLEKASKHMKKWANRK 442
            SPFEIV GRQP +PH++DHP+AGK+PQA NFTKEW+QT +IARAYLEKASK MKKWA++K
Sbjct: 1367 SPFEIVSGRQPVLPHLVDHPFAGKNPQALNFTKEWRQTNDIARAYLEKASKRMKKWADKK 1426

[Close]

BLAST of Moc08g03400 vs. ExPASy TrEMBL
Match: A0A5D3BYE6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold374G00260 PE=4 SV=1)

HSP 1 Score: 641.7 bits (1654), Expect = 2.2e-180
Identity = 346/641 (53.98%), Postives = 393/641 (61.31%), Query Frame = 0


Query: 1    MMKGPVLGLADVTKPFEVETDASDYALGGVLLQDGHPITYESRKLNNAERRYTVSEKEML 60
            +M+GP+LG+ADVTKPFEVETDASDYALGGVLLQ+GHPI YESRKLN AERRYTVSEKEML
Sbjct: 947  LMEGPLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAERRYTVSEKEML 1006

Query: 61   AVVHCLRSWRQYLLGSYFVVKTDNSAICHFFNQPKLTSKHARWQELLAEFDFKFEHKAGK 120
            AVVHCLR+WRQYLLGS FVVKTDNSA CHFF QPKLTSK ARWQE LAEFDF+FEHK G 
Sbjct: 1007 AVVHCLRAWRQYLLGSSFVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKKGS 1066

Query: 121  SNQAADALSRKEEHAALCMLAHIHTSKVDGSIRDLIREYLQRDPFARTVVELAKTGKTCQ 180
            SNQAADALSRK+EHAA+C+LAH+  S++ GS+RD +RE+LQ+D  A+ V+ LAK GKT Q
Sbjct: 1067 SNQAADALSRKQEHAAICLLAHLQGSEIGGSVRDTLREFLQKDHAAQNVMNLAKAGKTRQ 1126

Query: 181  FWVEGDLLFTRGNRL--------------------------------------------- 240
            FWVE DLL T+GNRL                                             
Sbjct: 1127 FWVEEDLLVTKGNRLYVPRAGGLRKKLLYECHDTLWAGHPGWQRTYALLKKGYFWPNMRD 1186

Query: 241  ------------------------------------------------------------ 300
                                                                        
Sbjct: 1187 DVMQYTKTCLICQQDKVEKVKVAGLLDPLPVPTRPWESVSMDFITHLPKVGDFEAILVII 1246

Query: 301  ------------------------------------------------------------ 360
                                                                        
Sbjct: 1247 DRFSKYATFIPATKQCSAETTAQLFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSFLG 1306

Query: 361  -----------------------------------QKNWVQLLDMAQFCFNGQTSSSTGK 420
                                               QKNWVQLLD+AQFCFN QTSSSTG+
Sbjct: 1307 TSLNISSSYHPQTDGQTERFNSMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSSTGR 1366

Query: 421  SPFEIVCGRQPSMPHILDHPYAGKSPQAHNFTKEWKQTTEIARAYLEKASKHMKKWANRK 442
            SPFEIV GRQP +PH++DHP+AGK+PQA NFTKEW+QT +IARAYLEKASK MKKWA++K
Sbjct: 1367 SPFEIVSGRQPVLPHLVDHPFAGKNPQALNFTKEWRQTNDIARAYLEKASKRMKKWADKK 1426

The following BLAST results are available for this feature:

BLAST of Moc08g03400 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0032849.1	2.0e-180	54.13	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0036830.1	3.5e-180	54.13	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0067557.1	4.5e-180	53.98	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0037220.1	4.5e-180	53.98	reverse transcriptase [Cucumis melo var. makuwa] >TYJ95897.1 reverse transcripta...	[more]
TYK28713.1	4.5e-180	53.98	reverse transcriptase [Cucumis melo var. makuwa]	[more]

BLAST of Moc08g03400 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P04323	4.6e-26	42.76	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
P20825	7.4e-24	43.08	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
Q8I7P9	7.9e-18	40.77	Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast...	[more]
Q9UR07	1.0e-17	39.57	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	1.0e-17	39.57	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]

BLAST of Moc08g03400 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SUK4	9.9e-181	54.13	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold81...	[more]
A0A5A7T0E2	1.7e-180	54.13	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold20...	[more]
A0A5D3C4R1	2.2e-180	53.98	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11...	[more]
A0A5A7UXR6	2.2e-180	53.98	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22...	[more]
A0A5D3BYE6	2.2e-180	53.98	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold37...	[more]

BLAST of Moc08g03400 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000953	Chromo/chromo shadow domain	SMART	SM00298	chromo_7	coord: 376..435 e-value: 7.9E-9 score: 45.3
IPR000953	Chromo/chromo shadow domain	PROSITE	PS50013	CHROMO_2	coord: 377..441 score: 13.100501
IPR041373	Reverse transcriptase, RNase H-like domain	PFAM	PF17917	RT_RNaseH	coord: 11..110 e-value: 4.8E-32 score: 110.4
IPR023780	Chromo domain	PFAM	PF00385	Chromo	coord: 378..431 e-value: 5.6E-11 score: 42.2
None	No IPR available	GENE3D	2.40.50.40		coord: 372..438 e-value: 2.8E-11 score: 44.9
None	No IPR available	GENE3D	3.10.20.370		coord: 11..82 e-value: 3.4E-8 score: 35.3
None	No IPR available	PANTHER	PTHR47266	FAMILY NOT NAMED	coord: 196..424
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 17..131 e-value: 2.30552E-56 score: 180.381
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 150..273 e-value: 2.0E-6 score: 29.2
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 2..117
IPR016197	Chromo-like domain superfamily	SUPERFAMILY	54160	Chromo domain-like	coord: 338..433

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc08g03400.1	Moc08g03400.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044260	cellular macromolecule metabolic process
biological_process	GO:0034641	cellular nitrogen compound metabolic process
biological_process	GO:0044238	primary metabolic process
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0003676	nucleic acid binding