Moc08g01750 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc08g01750
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Mitochondrial transcription termination factor family protein
Location	chr8: 1144441 .. 1145583 (-)
RNA-Seq Expression	Moc08g01750
Synteny	Moc08g01750

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCAATTTTCTGTTCAAAGCTCCGCTGCGTCTCCTTGCTCGCGATCTCCGGAAGTTTACAGATAACAGCATCTCAATTGGCCTCAATTCCTTCTCCTCTCTGTCTCAAATCTCTCAATCAACCAACAATCGGACAGTAGACTACCTCGTTCGCACCCTCGGGCTCTCCAAGGATTCGGCTGTCGCAGTTGCCAAGCGCATCCATCTCAAACGAACCGCCAATCCAGACTCCGTTATCGCTCTCTTCGAGGCCTATGGATTCGCTCCGTCCAACACTGCCAGCATCTTCTGTAGGAATCCCAGTCTCCTTCTTGCCGATCCGGACACTACACTCAAGCCCAAACTCGAGTTTCTCTCTCAAAACGGCGTATCGGGTCAAGTTCTGGTCGATGTGATATCCAGGGACCCGTCCATCCTCAGAAGGAGTTTGGACAAGCAGATTATTCCTTGTATTGATTTCCTTAGGAATTTCTTTGGCTCTACCGATGGTATTGTCTCGCTCTTTTCTGCTAGACGTGGGACTTGGGTTTTGCACAAGTTTTCGGAATCTGTGGCTCCCAATATCGAACGGCTGAGAGCTTATGGTGTTCCTGATTCAAACATCGCAAAAATGATTTGGGTGCGCCCGAGGACTCTCTCCAGGGACGCGGAAGGGTTCATTGACATTGTGGAGAAGACAAAGGAGGCGGGTTTTAATCCTTCAAGCTTGATGTTTATTTATGGGCTGTGTACATTTTCAGGGATGAAAAAGGACAAATGGTTGTCAAAGCTGCAGGTTTTTAAAAGCTTTGGGTGGTCAGAGGAGCAGTTTCAATCGTTATTTCTTAAGCAGCCCAAGTTTATGAATTCGTCCGAGGAGCAAATAAAGAGGGCCTTGGATTTCTTTATGAACAAATTAGACTGGACGCCCGAAGAAATTTCCAAGTACCCAATTGTGCTCTTTCTGAGTTTTGAAAAGAGGGTGATACCGAGGTCGTCTATCCTCCAGCACTTGATATCAAAAGGTTTTATCAAGAAGACGAGTGTTGGCAAGGCATTTATGATTCGCGAGGATAAGTTCTTGGTTAAGTTCGTGATGCAGTATCTTTCAAAGGACCCACATCTACTAGAGATGTACCAGAAGAAGATGGCGATTTTATGA

mRNA sequence

ATGTCCAATTTTCTGTTCAAAGCTCCGCTGCGTCTCCTTGCTCGCGATCTCCGGAAGTTTACAGATAACAGCATCTCAATTGGCCTCAATTCCTTCTCCTCTCTGTCTCAAATCTCTCAATCAACCAACAATCGGACAGTAGACTACCTCGTTCGCACCCTCGGGCTCTCCAAGGATTCGGCTGTCGCAGTTGCCAAGCGCATCCATCTCAAACGAACCGCCAATCCAGACTCCGTTATCGCTCTCTTCGAGGCCTATGGATTCGCTCCGTCCAACACTGCCAGCATCTTCTGTAGGAATCCCAGTCTCCTTCTTGCCGATCCGGACACTACACTCAAGCCCAAACTCGAGTTTCTCTCTCAAAACGGCGTATCGGGTCAAGTTCTGGTCGATGTGATATCCAGGGACCCGTCCATCCTCAGAAGGAGTTTGGACAAGCAGATTATTCCTTGTATTGATTTCCTTAGGAATTTCTTTGGCTCTACCGATGGTATTGTCTCGCTCTTTTCTGCTAGACGTGGGACTTGGGTTTTGCACAAGTTTTCGGAATCTGTGGCTCCCAATATCGAACGGCTGAGAGCTTATGGTGTTCCTGATTCAAACATCGCAAAAATGATTTGGGTGCGCCCGAGGACTCTCTCCAGGGACGCGGAAGGGTTCATTGACATTGTGGAGAAGACAAAGGAGGCGGGTTTTAATCCTTCAAGCTTGATGTTTATTTATGGGCTGTGTACATTTTCAGGGATGAAAAAGGACAAATGGTTGTCAAAGCTGCAGGTTTTTAAAAGCTTTGGGTGGTCAGAGGAGCAGTTTCAATCGTTATTTCTTAAGCAGCCCAAGTTTATGAATTCGTCCGAGGAGCAAATAAAGAGGGCCTTGGATTTCTTTATGAACAAATTAGACTGGACGCCCGAAGAAATTTCCAAGTACCCAATTGTGCTCTTTCTGAGTTTTGAAAAGAGGGTGATACCGAGGTCGTCTATCCTCCAGCACTTGATATCAAAAGGTTTTATCAAGAAGACGAGTGTTGGCAAGGCATTTATGATTCGCGAGGATAAGTTCTTGGTTAAGTTCGTGATGCAGTATCTTTCAAAGGACCCACATCTACTAGAGATGTACCAGAAGAAGATGGCGATTTTATGA

Coding sequence (CDS)

ATGTCCAATTTTCTGTTCAAAGCTCCGCTGCGTCTCCTTGCTCGCGATCTCCGGAAGTTTACAGATAACAGCATCTCAATTGGCCTCAATTCCTTCTCCTCTCTGTCTCAAATCTCTCAATCAACCAACAATCGGACAGTAGACTACCTCGTTCGCACCCTCGGGCTCTCCAAGGATTCGGCTGTCGCAGTTGCCAAGCGCATCCATCTCAAACGAACCGCCAATCCAGACTCCGTTATCGCTCTCTTCGAGGCCTATGGATTCGCTCCGTCCAACACTGCCAGCATCTTCTGTAGGAATCCCAGTCTCCTTCTTGCCGATCCGGACACTACACTCAAGCCCAAACTCGAGTTTCTCTCTCAAAACGGCGTATCGGGTCAAGTTCTGGTCGATGTGATATCCAGGGACCCGTCCATCCTCAGAAGGAGTTTGGACAAGCAGATTATTCCTTGTATTGATTTCCTTAGGAATTTCTTTGGCTCTACCGATGGTATTGTCTCGCTCTTTTCTGCTAGACGTGGGACTTGGGTTTTGCACAAGTTTTCGGAATCTGTGGCTCCCAATATCGAACGGCTGAGAGCTTATGGTGTTCCTGATTCAAACATCGCAAAAATGATTTGGGTGCGCCCGAGGACTCTCTCCAGGGACGCGGAAGGGTTCATTGACATTGTGGAGAAGACAAAGGAGGCGGGTTTTAATCCTTCAAGCTTGATGTTTATTTATGGGCTGTGTACATTTTCAGGGATGAAAAAGGACAAATGGTTGTCAAAGCTGCAGGTTTTTAAAAGCTTTGGGTGGTCAGAGGAGCAGTTTCAATCGTTATTTCTTAAGCAGCCCAAGTTTATGAATTCGTCCGAGGAGCAAATAAAGAGGGCCTTGGATTTCTTTATGAACAAATTAGACTGGACGCCCGAAGAAATTTCCAAGTACCCAATTGTGCTCTTTCTGAGTTTTGAAAAGAGGGTGATACCGAGGTCGTCTATCCTCCAGCACTTGATATCAAAAGGTTTTATCAAGAAGACGAGTGTTGGCAAGGCATTTATGATTCGCGAGGATAAGTTCTTGGTTAAGTTCGTGATGCAGTATCTTTCAAAGGACCCACATCTACTAGAGATGTACCAGAAGAAGATGGCGATTTTATGA

Protein sequence

MSNFLFKAPLRLLARDLRKFTDNSISIGLNSFSSLSQISQSTNNRTVDYLVRTLGLSKDSAVAVAKRIHLKRTANPDSVIALFEAYGFAPSNTASIFCRNPSLLLADPDTTLKPKLEFLSQNGVSGQVLVDVISRDPSILRRSLDKQIIPCIDFLRNFFGSTDGIVSLFSARRGTWVLHKFSESVAPNIERLRAYGVPDSNIAKMIWVRPRTLSRDAEGFIDIVEKTKEAGFNPSSLMFIYGLCTFSGMKKDKWLSKLQVFKSFGWSEEQFQSLFLKQPKFMNSSEEQIKRALDFFMNKLDWTPEEISKYPIVLFLSFEKRVIPRSSILQHLISKGFIKKTSVGKAFMIREDKFLVKFVMQYLSKDPHLLEMYQKKMAIL

Homology

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BLAST of Moc08g01750 vs. NCBI nr
Match: XP_022132136.1 (transcription termination factor MTERF8, chloroplastic-like [Momordica charantia])

HSP 1 Score: 745.0 bits (1922), Expect = 3.3e-211
Identity = 380/380 (100.00%), Postives = 380/380 (100.00%), Query Frame = 0


Query: 1   MSNFLFKAPLRLLARDLRKFTDNSISIGLNSFSSLSQISQSTNNRTVDYLVRTLGLSKDS 60
           MSNFLFKAPLRLLARDLRKFTDNSISIGLNSFSSLSQISQSTNNRTVDYLVRTLGLSKDS
Sbjct: 1   MSNFLFKAPLRLLARDLRKFTDNSISIGLNSFSSLSQISQSTNNRTVDYLVRTLGLSKDS 60

Query: 61  AVAVAKRIHLKRTANPDSVIALFEAYGFAPSNTASIFCRNPSLLLADPDTTLKPKLEFLS 120
           AVAVAKRIHLKRTANPDSVIALFEAYGFAPSNTASIFCRNPSLLLADPDTTLKPKLEFLS
Sbjct: 61  AVAVAKRIHLKRTANPDSVIALFEAYGFAPSNTASIFCRNPSLLLADPDTTLKPKLEFLS 120

Query: 121 QNGVSGQVLVDVISRDPSILRRSLDKQIIPCIDFLRNFFGSTDGIVSLFSARRGTWVLHK 180
           QNGVSGQVLVDVISRDPSILRRSLDKQIIPCIDFLRNFFGSTDGIVSLFSARRGTWVLHK
Sbjct: 121 QNGVSGQVLVDVISRDPSILRRSLDKQIIPCIDFLRNFFGSTDGIVSLFSARRGTWVLHK 180

Query: 181 FSESVAPNIERLRAYGVPDSNIAKMIWVRPRTLSRDAEGFIDIVEKTKEAGFNPSSLMFI 240
           FSESVAPNIERLRAYGVPDSNIAKMIWVRPRTLSRDAEGFIDIVEKTKEAGFNPSSLMFI
Sbjct: 181 FSESVAPNIERLRAYGVPDSNIAKMIWVRPRTLSRDAEGFIDIVEKTKEAGFNPSSLMFI 240

Query: 241 YGLCTFSGMKKDKWLSKLQVFKSFGWSEEQFQSLFLKQPKFMNSSEEQIKRALDFFMNKL 300
           YGLCTFSGMKKDKWLSKLQVFKSFGWSEEQFQSLFLKQPKFMNSSEEQIKRALDFFMNKL
Sbjct: 241 YGLCTFSGMKKDKWLSKLQVFKSFGWSEEQFQSLFLKQPKFMNSSEEQIKRALDFFMNKL 300

Query: 301 DWTPEEISKYPIVLFLSFEKRVIPRSSILQHLISKGFIKKTSVGKAFMIREDKFLVKFVM 360
           DWTPEEISKYPIVLFLSFEKRVIPRSSILQHLISKGFIKKTSVGKAFMIREDKFLVKFVM
Sbjct: 301 DWTPEEISKYPIVLFLSFEKRVIPRSSILQHLISKGFIKKTSVGKAFMIREDKFLVKFVM 360

Query: 361 QYLSKDPHLLEMYQKKMAIL 381
           QYLSKDPHLLEMYQKKMAIL
Sbjct: 361 QYLSKDPHLLEMYQKKMAIL 380

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BLAST of Moc08g01750 vs. NCBI nr
Match: XP_023537739.1 (uncharacterized protein LOC111798674 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 626.3 bits (1614), Expect = 1.7e-175
Identity = 314/380 (82.63%), Postives = 341/380 (89.74%), Query Frame = 0


Query: 1   MSNFLFKAPLRLLARDLRKFTDNSISIGLNSFSSLSQISQSTNNRTVDYLVRTLGLSKDS 60
           M+NFLFK PLR+ A+DL+KF  N  +I     SSLS+IS+STNNRT+DYLV TLG SKDS
Sbjct: 1   MTNFLFKVPLRIFAQDLQKFAGNDTTIARKFLSSLSEISESTNNRTIDYLVHTLGFSKDS 60

Query: 61  AVAVAKRIHLKRTANPDSVIALFEAYGFAPSNTASIFCRNPSLLLADPDTTLKPKLEFLS 120
           A+A AKRIHLK TANPDSVIALF+AYGF  S+TASIFCRNP LLLADPDTTLKPK EFLS
Sbjct: 61  ALAAAKRIHLKTTANPDSVIALFKAYGFTLSDTASIFCRNPHLLLADPDTTLKPKFEFLS 120

Query: 121 QNGVSGQVLVDVISRDPSILRRSLDKQIIPCIDFLRNFFGSTDGIVSLFSARRGTWVLHK 180
           +NG +G VLVDVISRDP ILRRSL KQI+PCIDFLRNFFGSTD +VSLFSARRGTWVL K
Sbjct: 121 RNGFTGHVLVDVISRDPEILRRSLKKQIVPCIDFLRNFFGSTDVLVSLFSARRGTWVLRK 180

Query: 181 FSESVAPNIERLRAYGVPDSNIAKMIWVRPRTLSRDAEGFIDIVEKTKEAGFNPSSLMFI 240
           FSESVAPNIE LRA GVPDS IAK+ WVRP TL+RDAE F DIVEKTKEAGF+PSS MFI
Sbjct: 181 FSESVAPNIELLRAIGVPDSKIAKIFWVRPWTLARDAEEFSDIVEKTKEAGFSPSSPMFI 240

Query: 241 YGLCTFSGMKKDKWLSKLQVFKSFGWSEEQFQSLFLKQPKFMNSSEEQIKRALDFFMNKL 300
           YGLCTFSGMKKDKWLSKL +F SFGWSEEQFQSLFLKQP FMNSSEE+IKRALDFFMNKL
Sbjct: 241 YGLCTFSGMKKDKWLSKLHIFTSFGWSEEQFQSLFLKQPTFMNSSEEKIKRALDFFMNKL 300

Query: 301 DWTPEEISKYPIVLFLSFEKRVIPRSSILQHLISKGFIKKTSVGKAFMIREDKFLVKFVM 360
           DWT EEIS+YPIVL+LSFEKRV+PRSSILQHL+SKGFIKKTS G+AFMI EDKFLVKFVM
Sbjct: 301 DWTHEEISRYPIVLYLSFEKRVVPRSSILQHLVSKGFIKKTSFGRAFMISEDKFLVKFVM 360

Query: 361 QYLSKDPHLLEMYQKKMAIL 381
           QYLS+DPHLLEMYQKKMA+L
Sbjct: 361 QYLSEDPHLLEMYQKKMAVL 380

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BLAST of Moc08g01750 vs. NCBI nr
Match: XP_023537738.1 (uncharacterized protein LOC111798674 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 624.8 bits (1610), Expect = 4.9e-175
Identity = 313/380 (82.37%), Postives = 341/380 (89.74%), Query Frame = 0


Query: 1   MSNFLFKAPLRLLARDLRKFTDNSISIGLNSFSSLSQISQSTNNRTVDYLVRTLGLSKDS 60
           M+NFLFK PLR+ A+DL+KF  N  +I     SSLS+IS+STNNRT+DYLV TLG SKDS
Sbjct: 1   MTNFLFKVPLRIFAQDLQKFAGNDTTIARKFLSSLSEISESTNNRTIDYLVHTLGFSKDS 60

Query: 61  AVAVAKRIHLKRTANPDSVIALFEAYGFAPSNTASIFCRNPSLLLADPDTTLKPKLEFLS 120
           A+A AKRIHLK TANPDSVIALF+AYGF  S+TASIFCRNP+LLLADPDTTLKPK EFLS
Sbjct: 61  ALAAAKRIHLKTTANPDSVIALFKAYGFTLSDTASIFCRNPNLLLADPDTTLKPKFEFLS 120

Query: 121 QNGVSGQVLVDVISRDPSILRRSLDKQIIPCIDFLRNFFGSTDGIVSLFSARRGTWVLHK 180
           +NG +G VLVDVIS DP ILRRSL KQI+PCIDFLRNFFGSTD +VSLFSARRGTWVL K
Sbjct: 121 RNGFTGHVLVDVISSDPEILRRSLKKQIVPCIDFLRNFFGSTDVLVSLFSARRGTWVLRK 180

Query: 181 FSESVAPNIERLRAYGVPDSNIAKMIWVRPRTLSRDAEGFIDIVEKTKEAGFNPSSLMFI 240
           FSESVAPNIE LRA GVPDS IAK+ WVRP TL+RDAE F DIVEKTKEAGF+PSS MFI
Sbjct: 181 FSESVAPNIELLRAIGVPDSKIAKIFWVRPWTLARDAEEFSDIVEKTKEAGFSPSSPMFI 240

Query: 241 YGLCTFSGMKKDKWLSKLQVFKSFGWSEEQFQSLFLKQPKFMNSSEEQIKRALDFFMNKL 300
           YGLCTFSGMKKDKWLSKL +F SFGWSEEQFQSLFLKQP FMNSSEE+IKRALDFFMNKL
Sbjct: 241 YGLCTFSGMKKDKWLSKLHIFTSFGWSEEQFQSLFLKQPTFMNSSEEKIKRALDFFMNKL 300

Query: 301 DWTPEEISKYPIVLFLSFEKRVIPRSSILQHLISKGFIKKTSVGKAFMIREDKFLVKFVM 360
           DWT EEIS+YPIVL+LSFEKRV+PRSSILQHL+SKGFIKKTS G+AFMI EDKFLVKFVM
Sbjct: 301 DWTHEEISRYPIVLYLSFEKRVVPRSSILQHLVSKGFIKKTSFGRAFMISEDKFLVKFVM 360

Query: 361 QYLSKDPHLLEMYQKKMAIL 381
           QYLS+DPHLLEMYQKKMA+L
Sbjct: 361 QYLSEDPHLLEMYQKKMAVL 380

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BLAST of Moc08g01750 vs. NCBI nr
Match: XP_022951074.1 (uncharacterized protein LOC111454032 [Cucurbita moschata] >XP_022951075.1 uncharacterized protein LOC111454032 [Cucurbita moschata] >XP_022951076.1 uncharacterized protein LOC111454032 [Cucurbita moschata])

HSP 1 Score: 624.0 bits (1608), Expect = 8.4e-175
Identity = 315/380 (82.89%), Postives = 341/380 (89.74%), Query Frame = 0


Query: 1   MSNFLFKAPLRLLARDLRKFTDNSISIGLNSFSSLSQISQSTNNRTVDYLVRTLGLSKDS 60
           M+NFLFK PLRL A+DL+KF  N  +I     SSLS+ISQSTNNRTVDYLV TLG SKDS
Sbjct: 1   MTNFLFKVPLRLFAQDLQKFAGNDTTISRKFLSSLSEISQSTNNRTVDYLVHTLGFSKDS 60

Query: 61  AVAVAKRIHLKRTANPDSVIALFEAYGFAPSNTASIFCRNPSLLLADPDTTLKPKLEFLS 120
           A+A AKRIHLK TANPDSVIALF+AYGF  S+TASIFCRNP+LLLADPDT LKPK EFLS
Sbjct: 61  ALAAAKRIHLKTTANPDSVIALFKAYGFTLSDTASIFCRNPNLLLADPDTILKPKFEFLS 120

Query: 121 QNGVSGQVLVDVISRDPSILRRSLDKQIIPCIDFLRNFFGSTDGIVSLFSARRGTWVLHK 180
           +NG +G VLV+VISRDP ILRRSL KQI+PCIDFLR FFGSTD IVSLFSARRGTWVL K
Sbjct: 121 RNGFTGHVLVNVISRDPEILRRSLKKQIVPCIDFLRIFFGSTDVIVSLFSARRGTWVLRK 180

Query: 181 FSESVAPNIERLRAYGVPDSNIAKMIWVRPRTLSRDAEGFIDIVEKTKEAGFNPSSLMFI 240
           FSESVAPNIE LRA GVPDS IAK+ WVRPRTL+RDAE F DIVEKTKEAGFNPSS MFI
Sbjct: 181 FSESVAPNIELLRANGVPDSKIAKIFWVRPRTLARDAEEFSDIVEKTKEAGFNPSSPMFI 240

Query: 241 YGLCTFSGMKKDKWLSKLQVFKSFGWSEEQFQSLFLKQPKFMNSSEEQIKRALDFFMNKL 300
           YGLCTFSGMKKDKWLSKL +F SFGWS+EQFQSLFLKQP FMNSSEE+IKRALDFFMNKL
Sbjct: 241 YGLCTFSGMKKDKWLSKLHIFTSFGWSKEQFQSLFLKQPTFMNSSEEKIKRALDFFMNKL 300

Query: 301 DWTPEEISKYPIVLFLSFEKRVIPRSSILQHLISKGFIKKTSVGKAFMIREDKFLVKFVM 360
           DWT EEIS+YPIVL+LSFEKRV+PRSSILQHL+SKGFIKKTS G+AFM+ EDKFLVKFVM
Sbjct: 301 DWTHEEISRYPIVLYLSFEKRVVPRSSILQHLMSKGFIKKTSFGRAFMLSEDKFLVKFVM 360

Query: 361 QYLSKDPHLLEMYQKKMAIL 381
           QYLS+DPHLLEMYQKKMA+L
Sbjct: 361 QYLSEDPHLLEMYQKKMAVL 380

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BLAST of Moc08g01750 vs. NCBI nr
Match: XP_023537741.1 (uncharacterized protein LOC111798675 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 624.0 bits (1608), Expect = 8.4e-175
Identity = 314/380 (82.63%), Postives = 339/380 (89.21%), Query Frame = 0


Query: 1   MSNFLFKAPLRLLARDLRKFTDNSISIGLNSFSSLSQISQSTNNRTVDYLVRTLGLSKDS 60
           M+NFLFK PLRL A+DL+KF  N  +I     SSLS+IS+STNNRTVDYLV TLG SKDS
Sbjct: 1   MTNFLFKVPLRLFAQDLQKFAGNDTTISRKFLSSLSEISESTNNRTVDYLVHTLGFSKDS 60

Query: 61  AVAVAKRIHLKRTANPDSVIALFEAYGFAPSNTASIFCRNPSLLLADPDTTLKPKLEFLS 120
           A+A AKRIHLK TANPDSVIALF+AYGF  S+TASIFCRNP+LLLADPDTTLKPK EFLS
Sbjct: 61  ALAAAKRIHLKTTANPDSVIALFKAYGFTLSDTASIFCRNPNLLLADPDTTLKPKFEFLS 120

Query: 121 QNGVSGQVLVDVISRDPSILRRSLDKQIIPCIDFLRNFFGSTDGIVSLFSARRGTWVLHK 180
           +NG +G VLVDVISRDPSILRRSL KQI+PCIDFLRNFFGSTDG++SLFSARRGTWVL  
Sbjct: 121 RNGFTGHVLVDVISRDPSILRRSLKKQIVPCIDFLRNFFGSTDGVISLFSARRGTWVLRN 180

Query: 181 FSESVAPNIERLRAYGVPDSNIAKMIWVRPRTLSRDAEGFIDIVEKTKEAGFNPSSLMFI 240
           FSESVAPNIE LRA GVPDSNIAK+ WVRPRTL+RDAE F DIVEKTKEAGFNPSS MF 
Sbjct: 181 FSESVAPNIELLRANGVPDSNIAKIFWVRPRTLARDAEEFSDIVEKTKEAGFNPSSPMFT 240

Query: 241 YGLCTFSGMKKDKWLSKLQVFKSFGWSEEQFQSLFLKQPKFMNSSEEQIKRALDFFMNKL 300
           YGLCTF GMKKDKWLSKLQ+F SFGWSEEQFQSLFLKQP  MNSSEEQIK+ALDF MNKL
Sbjct: 241 YGLCTFLGMKKDKWLSKLQIFTSFGWSEEQFQSLFLKQPTIMNSSEEQIKKALDFLMNKL 300

Query: 301 DWTPEEISKYPIVLFLSFEKRVIPRSSILQHLISKGFIKKTSVGKAFMIREDKFLVKFVM 360
           DWT EEI KYP VL+LSFEKRV+PRSSILQHLISKGFIKKT+ G+AFMI EDKFLVKFVM
Sbjct: 301 DWTHEEICKYPNVLYLSFEKRVVPRSSILQHLISKGFIKKTNFGRAFMISEDKFLVKFVM 360

Query: 361 QYLSKDPHLLEMYQKKMAIL 381
           QYLS+ PHLLEMYQKKMA+L
Sbjct: 361 QYLSEYPHLLEMYQKKMAVL 380

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BLAST of Moc08g01750 vs. ExPASy Swiss-Prot
Match: Q9SZL6 (Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTERF6 PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.4e-07
Identity = 63/283 (22.26%), Postives = 118/283 (41.70%), Query Frame = 0


Query: 75  NPDSVIALFEAYGFAPSNTASIFCRNPSLLLADPDTTLKPKLEFLSQ-NGVSGQVLVDVI 134
           N  S++  F   GF   +   +  +   L  A  D       ++LS   G+  + L  ++
Sbjct: 5   NTSSIMWFFRDKGFDDPSIDKMLRKCKQLEKAQSDVA-SENWDYLSNIVGIQERKLPYIV 64

Query: 135 SRDPSILRRSLDKQIIPCIDFLRNFFGSTDGIVSLFSARRGTWVLHKFSESVAPNIERLR 194
           SR P IL   LD+++IP ++ L +  G     V+    +    + H   E + P +   +
Sbjct: 65  SRCPKILTLRLDERLIPMVECLSS-LGRNPREVASAITKFPPILSHSVEEKLCPLLAFFQ 124

Query: 195 AYGVPDSNIAKMIWVRPRTLSRDAEGFID-IVEKTKEAGFNPSSLM--FIYGLCTFSGMK 254
           A GVP++ + KMI   PR +S   +  +  IV      G +   ++   +       G  
Sbjct: 125 ALGVPETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLVKNPFLMGYS 184

Query: 255 KDKWLSKLQVF--KSFGWSEEQFQSLFLKQPKFMNSSEEQIKRALDFFMNKLDWTPEEIS 314
            DK L     F   S G SE+  +S+ +  P+ +     +I +    ++ +  +   +I+
Sbjct: 185 VDKRLRPTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYDYLKECGFGDSQIA 244

Query: 315 K----YPIVLFLSFEKRVIPRSSILQHLISKGFIKKTSVGKAF 348
                YP +L  S +  + PR   L  ++ +G  +  S  + F
Sbjct: 245 TMVTGYPQILIKSVKNSLQPRIRFLVQVMGRGMDEVASYPEFF 285

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BLAST of Moc08g01750 vs. ExPASy Swiss-Prot
Match: Q9FK23 (Transcription termination factor MTERF8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF8 PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.9e-07
Identity = 59/302 (19.54%), Postives = 123/302 (40.73%), Query Frame = 0


Query: 55  GLSKDSAVAVAKRIHLKRTANPDSVIALFEAYGF-APSNTASIFCRNPSLLLADPDTTLK 114
           G+ K+    V  +++L +     SV  +     F  P     I  R P +L +D D+ L 
Sbjct: 192 GIPKEKISHVLNKVYLNKLLYQKSVEDIERLISFLEPFGGIGIIARRPVILNSDLDSQLI 251

Query: 115 PKLEFL-SQNGVSGQVLVDVISRDPSILRRSLDKQIIPCIDFLRNFFGSTDGIVSLFSAR 174
           P+++F+ + +G        V+ R P+IL  S++  +   ++FL++F G T   V      
Sbjct: 252 PRVDFIRNLSGEDDFATGTVLRRLPAILSYSVE-HMNGQVEFLKSFAGLTSEQVFKIVHV 311

Query: 175 RGTWVLHKFSESVAPNIERLRAYGVPDSNIAKMIWVRPRTLSRDAEGFIDIVEKTKEAGF 234
               +       + P IE L+  G     + K +   P  L+         +    + G+
Sbjct: 312 FPNVISTSKERKLRPRIEFLKECGFDSPGMFKFLSKAPLILALSENNLSHKLGFLVKIGY 371

Query: 235 NPSSLMFIYGLCTFSGMKKDKWLSKLQVFKSFGWSEEQFQSLFLKQPKFMNSSEEQIKRA 294
              +    + +   +    D     + ++ S+G S E   ++  K P+ +  +   ++  
Sbjct: 372 KHRTKELAFAMGAVTRTSSDNMQRVIGLYLSYGLSFEDILAMSTKHPQVLQYNYTSLEEK 431

Query: 295 LDFFMNKLDWTPEEISKYPIVLFLSFEKRVIPRSSILQHLISKGFIKKTSVGKAFMIRED 354
           L++ +  +    EE+  +P  L    + R+  R    + L S+G  +  S+ K   +  +
Sbjct: 432 LEYLIEYMGREVEELLAFPAFLGYKLDSRIKHRYE--EKLKSRG--ENMSLNKLLTVSAE 488

[Close]

BLAST of Moc08g01750 vs. ExPASy Swiss-Prot
Match: Q84X53 (Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF1 PE=2 SV=2)

HSP 1 Score: 55.1 bits (131), Expect = 2.0e-06
Identity = 46/167 (27.54%), Postives = 73/167 (43.71%), Query Frame = 0


Query: 51  VRTLGLSKDSAVAVAKRIHLKRTANPDSVIALFEAYGFAPSNTASIFCRNPSLLLADPDT 110
           ++ L +    A+ V   +     ++  SV  L  + G +      I    P LL +DP++
Sbjct: 40  LQDLNVDPHKALRVNPSLRSAPISSVVSVETLLSSTGLSRPAVGRILDMFPDLLTSDPES 99

Query: 111 TLKPKLEFLSQN-GVSGQVLVDVISRDPSILRRSLDKQIIPCIDFLRNF-FGSTDGIVSL 170
            + P L FLS    +S Q +   ISR P +L  S+D Q+ P + FL+   F   D I S 
Sbjct: 100 EILPVLRFLSNEISISEQDIPKSISRCPRLLISSVDYQLRPALTFLKTLGFVGRDTITS- 159

Query: 171 FSARRGTWVLHKFSESVAPNIERL-RAYGVPDSNIAKMIWVRPRTLS 215
              R    ++     ++ P IE L    G     +AKM+   P  L+
Sbjct: 160 ---RNTVLLVSNVERTLIPKIEYLEEGLGFTREEVAKMVVRSPALLT 202

[Close]

BLAST of Moc08g01750 vs. ExPASy Swiss-Prot
Match: Q9M219 (Transcription termination factor MTEF18, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTERF18 PE=1 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 7.8e-06
Identity = 63/319 (19.75%), Postives = 125/319 (39.18%), Query Frame = 0


Query: 80  IALFEAYGFAPSNTASIFCRNPSLLLADPDTTLKPKLEFLSQNGVSGQVLVDVISRDPSI 139
           I +F   G        + CRN SL L   +  L  K  +  + GVS +    +I R+P+I
Sbjct: 235 IRIFYDLGCENEEMWELMCRNKSLFLEYSEEALMNKAGYFCRFGVSKEDAALLILRNPAI 294

Query: 140 LRRSLDKQIIPCIDFLRNFFGSTDGIVSLFSARRGTWVLHKFSESVAPNIERL-----RA 199
           +   L+K +I     L++F    D + ++  A++  +V  +      P + R      R 
Sbjct: 295 MNFDLEKPVISVTGMLKHFGLRQDEVDAV--AQKYPYVFGRNQLKNLPYVLRAIDLHERI 354

Query: 200 YGVPDSN----IAKMIWVRP-RTLSRDAEGFIDIVEKTKEAGFNPSSLMFIYGLCTFSGM 259
           + +  +     +A    + P   L R+ +  ++ ++ ++    N   L F++ +      
Sbjct: 355 FDILKNGNHHLLASYTLMDPDEDLEREYQEGLEELQNSRTKRHNIQKLDFLHEIGFGENG 414

Query: 260 KKDKWL-----------SKLQVFKSFGWSEEQFQSLFLKQPKFMNSSEEQIKRALDFFMN 319
              K L            + Q+  + G    +   L    PK +N     I+  L F   
Sbjct: 415 ITMKVLQHVHGTAVELHDRFQILLNSGIIFSKICMLIRSAPKILNQKPHSIQDKLRFLCG 474

Query: 320 KLDWTPEEISKYPIVLFLSFEKRVIPRSSILQHLISKGFIKKT-SVGKAFMIREDKFLVK 377
           ++  + + +  +P  L    E R+ PR    + L+ KGF +K+ S+       E  F+ +
Sbjct: 475 EMGDSLDYLEVFPAYLCFDLENRISPRFRFHKWLVEKGFSEKSYSIASIVATSEKAFIAR 534

[Close]

BLAST of Moc08g01750 vs. ExPASy Swiss-Prot
Match: F4IHL3 (Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF2 PE=3 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 2.5e-04
Identity = 30/128 (23.44%), Postives = 54/128 (42.19%), Query Frame = 0


Query: 79  VIALFEAYGFAPSNTASIFCRNPSLLLADPDTTLKPKLEFLSQNGVSGQVLVDVISRDPS 138
           ++  F   G        I    P L   D + T+ PK+ FL + G+  + + +++ + PS
Sbjct: 391 LVKYFYYLGIPKEGMKRILVVKPILYCIDLEKTIAPKVRFLQEMGIPNEAIGNMLVKFPS 450

Query: 139 ILRRSLDKQIIPCIDFLRNFFGSTDGIVSLFSARRGTWVLHKFSESVAPNIERLRAYGVP 198
           +L  SL K+I P + FL    G T   +    A     +       + PN+    + G+ 
Sbjct: 451 LLTNSLYKKIRPVVIFLLTRAGVTQKDIGKVIAMDPALLGCSIGTKLEPNMRYYISLGIR 510

Query: 199 DSNIAKMI 207
              + +MI
Sbjct: 511 FYQLGEMI 518

[Close]

BLAST of Moc08g01750 vs. ExPASy TrEMBL
Match: A0A6J1BRE6 (transcription termination factor MTERF8, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111005076 PE=3 SV=1)

HSP 1 Score: 745.0 bits (1922), Expect = 1.6e-211
Identity = 380/380 (100.00%), Postives = 380/380 (100.00%), Query Frame = 0


Query: 1   MSNFLFKAPLRLLARDLRKFTDNSISIGLNSFSSLSQISQSTNNRTVDYLVRTLGLSKDS 60
           MSNFLFKAPLRLLARDLRKFTDNSISIGLNSFSSLSQISQSTNNRTVDYLVRTLGLSKDS
Sbjct: 1   MSNFLFKAPLRLLARDLRKFTDNSISIGLNSFSSLSQISQSTNNRTVDYLVRTLGLSKDS 60

Query: 61  AVAVAKRIHLKRTANPDSVIALFEAYGFAPSNTASIFCRNPSLLLADPDTTLKPKLEFLS 120
           AVAVAKRIHLKRTANPDSVIALFEAYGFAPSNTASIFCRNPSLLLADPDTTLKPKLEFLS
Sbjct: 61  AVAVAKRIHLKRTANPDSVIALFEAYGFAPSNTASIFCRNPSLLLADPDTTLKPKLEFLS 120

Query: 121 QNGVSGQVLVDVISRDPSILRRSLDKQIIPCIDFLRNFFGSTDGIVSLFSARRGTWVLHK 180
           QNGVSGQVLVDVISRDPSILRRSLDKQIIPCIDFLRNFFGSTDGIVSLFSARRGTWVLHK
Sbjct: 121 QNGVSGQVLVDVISRDPSILRRSLDKQIIPCIDFLRNFFGSTDGIVSLFSARRGTWVLHK 180

Query: 181 FSESVAPNIERLRAYGVPDSNIAKMIWVRPRTLSRDAEGFIDIVEKTKEAGFNPSSLMFI 240
           FSESVAPNIERLRAYGVPDSNIAKMIWVRPRTLSRDAEGFIDIVEKTKEAGFNPSSLMFI
Sbjct: 181 FSESVAPNIERLRAYGVPDSNIAKMIWVRPRTLSRDAEGFIDIVEKTKEAGFNPSSLMFI 240

Query: 241 YGLCTFSGMKKDKWLSKLQVFKSFGWSEEQFQSLFLKQPKFMNSSEEQIKRALDFFMNKL 300
           YGLCTFSGMKKDKWLSKLQVFKSFGWSEEQFQSLFLKQPKFMNSSEEQIKRALDFFMNKL
Sbjct: 241 YGLCTFSGMKKDKWLSKLQVFKSFGWSEEQFQSLFLKQPKFMNSSEEQIKRALDFFMNKL 300

Query: 301 DWTPEEISKYPIVLFLSFEKRVIPRSSILQHLISKGFIKKTSVGKAFMIREDKFLVKFVM 360
           DWTPEEISKYPIVLFLSFEKRVIPRSSILQHLISKGFIKKTSVGKAFMIREDKFLVKFVM
Sbjct: 301 DWTPEEISKYPIVLFLSFEKRVIPRSSILQHLISKGFIKKTSVGKAFMIREDKFLVKFVM 360

Query: 361 QYLSKDPHLLEMYQKKMAIL 381
           QYLSKDPHLLEMYQKKMAIL
Sbjct: 361 QYLSKDPHLLEMYQKKMAIL 380

[Close]

BLAST of Moc08g01750 vs. ExPASy TrEMBL
Match: A0A6J1GHP2 (uncharacterized protein LOC111454032 OS=Cucurbita moschata OX=3662 GN=LOC111454032 PE=3 SV=1)

HSP 1 Score: 624.0 bits (1608), Expect = 4.1e-175
Identity = 315/380 (82.89%), Postives = 341/380 (89.74%), Query Frame = 0


Query: 1   MSNFLFKAPLRLLARDLRKFTDNSISIGLNSFSSLSQISQSTNNRTVDYLVRTLGLSKDS 60
           M+NFLFK PLRL A+DL+KF  N  +I     SSLS+ISQSTNNRTVDYLV TLG SKDS
Sbjct: 1   MTNFLFKVPLRLFAQDLQKFAGNDTTISRKFLSSLSEISQSTNNRTVDYLVHTLGFSKDS 60

Query: 61  AVAVAKRIHLKRTANPDSVIALFEAYGFAPSNTASIFCRNPSLLLADPDTTLKPKLEFLS 120
           A+A AKRIHLK TANPDSVIALF+AYGF  S+TASIFCRNP+LLLADPDT LKPK EFLS
Sbjct: 61  ALAAAKRIHLKTTANPDSVIALFKAYGFTLSDTASIFCRNPNLLLADPDTILKPKFEFLS 120

Query: 121 QNGVSGQVLVDVISRDPSILRRSLDKQIIPCIDFLRNFFGSTDGIVSLFSARRGTWVLHK 180
           +NG +G VLV+VISRDP ILRRSL KQI+PCIDFLR FFGSTD IVSLFSARRGTWVL K
Sbjct: 121 RNGFTGHVLVNVISRDPEILRRSLKKQIVPCIDFLRIFFGSTDVIVSLFSARRGTWVLRK 180

Query: 181 FSESVAPNIERLRAYGVPDSNIAKMIWVRPRTLSRDAEGFIDIVEKTKEAGFNPSSLMFI 240
           FSESVAPNIE LRA GVPDS IAK+ WVRPRTL+RDAE F DIVEKTKEAGFNPSS MFI
Sbjct: 181 FSESVAPNIELLRANGVPDSKIAKIFWVRPRTLARDAEEFSDIVEKTKEAGFNPSSPMFI 240

Query: 241 YGLCTFSGMKKDKWLSKLQVFKSFGWSEEQFQSLFLKQPKFMNSSEEQIKRALDFFMNKL 300
           YGLCTFSGMKKDKWLSKL +F SFGWS+EQFQSLFLKQP FMNSSEE+IKRALDFFMNKL
Sbjct: 241 YGLCTFSGMKKDKWLSKLHIFTSFGWSKEQFQSLFLKQPTFMNSSEEKIKRALDFFMNKL 300

Query: 301 DWTPEEISKYPIVLFLSFEKRVIPRSSILQHLISKGFIKKTSVGKAFMIREDKFLVKFVM 360
           DWT EEIS+YPIVL+LSFEKRV+PRSSILQHL+SKGFIKKTS G+AFM+ EDKFLVKFVM
Sbjct: 301 DWTHEEISRYPIVLYLSFEKRVVPRSSILQHLMSKGFIKKTSFGRAFMLSEDKFLVKFVM 360

Query: 361 QYLSKDPHLLEMYQKKMAIL 381
           QYLS+DPHLLEMYQKKMA+L
Sbjct: 361 QYLSEDPHLLEMYQKKMAVL 380

[Close]

BLAST of Moc08g01750 vs. ExPASy TrEMBL
Match: A0A6J1GGM9 (uncharacterized protein LOC111454031 OS=Cucurbita moschata OX=3662 GN=LOC111454031 PE=3 SV=1)

HSP 1 Score: 620.5 bits (1599), Expect = 4.5e-174
Identity = 311/380 (81.84%), Postives = 340/380 (89.47%), Query Frame = 0


Query: 1   MSNFLFKAPLRLLARDLRKFTDNSISIGLNSFSSLSQISQSTNNRTVDYLVRTLGLSKDS 60
           M+NFLFK PLRL A+DL+KF  N  +I     SSLS+ISQSTNNRTVDYLV TLG SKDS
Sbjct: 1   MTNFLFKVPLRLFAQDLQKFAGNDTTISRKFLSSLSEISQSTNNRTVDYLVHTLGFSKDS 60

Query: 61  AVAVAKRIHLKRTANPDSVIALFEAYGFAPSNTASIFCRNPSLLLADPDTTLKPKLEFLS 120
           A+A AKRIHLK TANPDSVIALF+AYGF  S+TASIFCR+P+LLLADPDT LKPK EFLS
Sbjct: 61  ALAAAKRIHLKTTANPDSVIALFKAYGFTLSDTASIFCRHPNLLLADPDTILKPKFEFLS 120

Query: 121 QNGVSGQVLVDVISRDPSILRRSLDKQIIPCIDFLRNFFGSTDGIVSLFSARRGTWVLHK 180
           +NG +G VLVDVISRDPSILRRSL KQI+PCIDFLRNFFGSTDG+VSLFSARRGTWVL K
Sbjct: 121 RNGFTGHVLVDVISRDPSILRRSLKKQIVPCIDFLRNFFGSTDGVVSLFSARRGTWVLRK 180

Query: 181 FSESVAPNIERLRAYGVPDSNIAKMIWVRPRTLSRDAEGFIDIVEKTKEAGFNPSSLMFI 240
           F+ESVAPNIE LRA GVPDSNIAK+ W+RPRTL+R+AE F DIVEKTKEAGFNPSS MF 
Sbjct: 181 FTESVAPNIELLRANGVPDSNIAKIFWMRPRTLARNAEEFSDIVEKTKEAGFNPSSPMFT 240

Query: 241 YGLCTFSGMKKDKWLSKLQVFKSFGWSEEQFQSLFLKQPKFMNSSEEQIKRALDFFMNKL 300
           YGLCTF GMKKDKWLSKL +F SFGWSEEQFQSLFLKQP  MNSSEEQIK+ALDF MNKL
Sbjct: 241 YGLCTFLGMKKDKWLSKLHIFTSFGWSEEQFQSLFLKQPTIMNSSEEQIKKALDFLMNKL 300

Query: 301 DWTPEEISKYPIVLFLSFEKRVIPRSSILQHLISKGFIKKTSVGKAFMIREDKFLVKFVM 360
           DWT EEISKYP VL+LSFEKRV+PRSSILQHL+SKGFIKKT+ G+AFM+ EDKFLVKFVM
Sbjct: 301 DWTHEEISKYPNVLYLSFEKRVVPRSSILQHLMSKGFIKKTNFGRAFMLSEDKFLVKFVM 360

Query: 361 QYLSKDPHLLEMYQKKMAIL 381
           QYLS+DPHLLEMYQKKMA+L
Sbjct: 361 QYLSEDPHLLEMYQKKMAVL 380

[Close]

BLAST of Moc08g01750 vs. ExPASy TrEMBL
Match: A0A6J1KMV5 (uncharacterized protein LOC111496044 OS=Cucurbita maxima OX=3661 GN=LOC111496044 PE=3 SV=1)

HSP 1 Score: 619.8 bits (1597), Expect = 7.7e-174
Identity = 315/380 (82.89%), Postives = 338/380 (88.95%), Query Frame = 0


Query: 1   MSNFLFKAPLRLLARDLRKFTDNSISIGLNSFSSLSQISQSTNNRTVDYLVRTLGLSKDS 60
           M+NFLFK PLR  A++L+KF  N  +I  N  SSLS+IS+STNNRTVDYLV TLG SKDS
Sbjct: 1   MTNFLFKVPLRFFAQELQKFAGNDPTISRNFLSSLSKISESTNNRTVDYLVHTLGFSKDS 60

Query: 61  AVAVAKRIHLKRTANPDSVIALFEAYGFAPSNTASIFCRNPSLLLADPDTTLKPKLEFLS 120
           A+A AKRIHLK TANPDSVIALF+AYGF  S+TASIFCR+P LLLADPDT LKPK+EFLS
Sbjct: 61  ALAAAKRIHLKSTANPDSVIALFKAYGFTLSDTASIFCRHPHLLLADPDTILKPKIEFLS 120

Query: 121 QNGVSGQVLVDVISRDPSILRRSLDKQIIPCIDFLRNFFGSTDGIVSLFSARRGTWVLHK 180
           +NG +G VLVDVISRDPSILRRSL   I+PCIDFLRNFFGSTDGIVSLFSARRGTWVLH 
Sbjct: 121 RNGFTGHVLVDVISRDPSILRRSLKNLIVPCIDFLRNFFGSTDGIVSLFSARRGTWVLHN 180

Query: 181 FSESVAPNIERLRAYGVPDSNIAKMIWVRPRTLSRDAEGFIDIVEKTKEAGFNPSSLMFI 240
           FSESVAPNIE LRA GV DSNIAKMIW RPRTL+RDAE F DIVEKTKEAGFNPSS MF 
Sbjct: 181 FSESVAPNIELLRANGVLDSNIAKMIWARPRTLARDAEEFSDIVEKTKEAGFNPSSPMFT 240

Query: 241 YGLCTFSGMKKDKWLSKLQVFKSFGWSEEQFQSLFLKQPKFMNSSEEQIKRALDFFMNKL 300
           YGLCTFS MKKDKWLSKL +F SFGWSEEQFQSLFLKQP FM SSEEQIKRALDFFMNKL
Sbjct: 241 YGLCTFSVMKKDKWLSKLHIFTSFGWSEEQFQSLFLKQPTFMYSSEEQIKRALDFFMNKL 300

Query: 301 DWTPEEISKYPIVLFLSFEKRVIPRSSILQHLISKGFIKKTSVGKAFMIREDKFLVKFVM 360
           DWT EEISKYP VL+LSFEKRV+PRSSILQHLISKGFIKKTS G+AF+I EDKFLVKFVM
Sbjct: 301 DWTHEEISKYPNVLYLSFEKRVVPRSSILQHLISKGFIKKTSFGRAFLISEDKFLVKFVM 360

Query: 361 QYLSKDPHLLEMYQKKMAIL 381
           QYLS+DPHLLEMYQKKMA+L
Sbjct: 361 QYLSEDPHLLEMYQKKMAVL 380

[Close]

BLAST of Moc08g01750 vs. ExPASy TrEMBL
Match: A0A6J1KSF9 (uncharacterized protein LOC111496045 OS=Cucurbita maxima OX=3661 GN=LOC111496045 PE=3 SV=1)

HSP 1 Score: 617.8 bits (1592), Expect = 2.9e-173
Identity = 311/380 (81.84%), Postives = 341/380 (89.74%), Query Frame = 0


Query: 1   MSNFLFKAPLRLLARDLRKFTDNSISIGLNSFSSLSQISQSTNNRTVDYLVRTLGLSKDS 60
           M+NFLFK PLRL A++L+KF  N  +I     SSLS+IS+STNNRTVDYLV TLG SKDS
Sbjct: 1   MTNFLFKVPLRLFAQELQKFAGNDPTISRKFLSSLSKISESTNNRTVDYLVHTLGFSKDS 60

Query: 61  AVAVAKRIHLKRTANPDSVIALFEAYGFAPSNTASIFCRNPSLLLADPDTTLKPKLEFLS 120
           A+A AKRIHLK TANPDSVIALF+AYGF  S+TASIFCR+P+LLLADPDT LKPK+EFLS
Sbjct: 61  ALAAAKRIHLKSTANPDSVIALFKAYGFTLSDTASIFCRHPNLLLADPDTILKPKIEFLS 120

Query: 121 QNGVSGQVLVDVISRDPSILRRSLDKQIIPCIDFLRNFFGSTDGIVSLFSARRGTWVLHK 180
           +NG +G VLVDVISRDPSILRRSL KQI+PCIDFLRNFFGSTDGIVSLFSARRGTWVL K
Sbjct: 121 RNGFTGHVLVDVISRDPSILRRSLKKQIVPCIDFLRNFFGSTDGIVSLFSARRGTWVLRK 180

Query: 181 FSESVAPNIERLRAYGVPDSNIAKMIWVRPRTLSRDAEGFIDIVEKTKEAGFNPSSLMFI 240
           FSESVAPNIE LRA GVPDSNIAK+ WVRPRTL+RDAE F DIVEKTKEAGFNPSS MF 
Sbjct: 181 FSESVAPNIELLRANGVPDSNIAKIFWVRPRTLARDAEEFSDIVEKTKEAGFNPSSPMFT 240

Query: 241 YGLCTFSGMKKDKWLSKLQVFKSFGWSEEQFQSLFLKQPKFMNSSEEQIKRALDFFMNKL 300
           YGLCT+ GMKKDKWLSKL +F SFGWSEEQFQSLFLKQP  MNSSEE+IKRAL+FFMNKL
Sbjct: 241 YGLCTYLGMKKDKWLSKLHIFTSFGWSEEQFQSLFLKQPTIMNSSEEKIKRALNFFMNKL 300

Query: 301 DWTPEEISKYPIVLFLSFEKRVIPRSSILQHLISKGFIKKTSVGKAFMIREDKFLVKFVM 360
           DWT EEISKYP +L+LS EKRV+PRSSILQHLISKGFIKKTS G+AF++ EDKFLVKFVM
Sbjct: 301 DWTHEEISKYPNLLYLSVEKRVVPRSSILQHLISKGFIKKTSFGRAFLMSEDKFLVKFVM 360

Query: 361 QYLSKDPHLLEMYQKKMAIL 381
           QYLS+DPHLLEMYQKKMA+L
Sbjct: 361 QYLSEDPHLLEMYQKKMAVL 380

[Close]

BLAST of Moc08g01750 vs. TAIR 10
Match: AT5G07900.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 204.1 bits (518), Expect = 1.9e-52
Identity = 114/331 (34.44%), Postives = 188/331 (56.80%), Query Frame = 0


Query: 46  TVDYLVRTLGLSKDSAVAVAKRIHLKRTANPDSVIALFEAYGFAPSNTASIFCRNPSLLL 105
           T++YL+ + GLS DSA   ++++ L     P++V+ L   +GF  +  +S+  + P LLL
Sbjct: 71  TLNYLIDSCGLSPDSATVASRKLLLDSPERPNTVLNLLRDHGFTTAQISSLVKKRPVLLL 130

Query: 106 ADPDTTLKPKLEFLSQNGVSGQVLVDVISRDPSILRRSLDKQIIPCIDFLRNFFGSTDGI 165
           A+ ++ L PKL F    GVS  +L   ++ DP+IL RSL  Q+IP  +FL++   S + I
Sbjct: 131 ANAESVLLPKLSFFLSIGVSKSLLARTLASDPTILTRSLVNQLIPSYNFLKSVLDSDEKI 190

Query: 166 VSLFSARRGTWV-LHKFSESVAPNIERLRAYGVPDSNIAKMIWVRPRTLSRDAEGFIDIV 225
           V+  + RR TWV L   ++++ PNI  +   GVP+  I  ++   P  + +    F  I 
Sbjct: 191 VA--ALRRTTWVFLEDHTKNLVPNINYMAETGVPEKCIKLLLTHFPEAVMQKNHEFQAIA 250

Query: 226 EKTKEAGFNPSSLMFIYGLCTFSGM-KKDKWLSKLQVFKSFGWSEEQFQSLFLKQPKFMN 285
           ++ +E GFNP    F+  +   SG   K  W    +V++ +GWSE+     F K P  M 
Sbjct: 251 KQAQEMGFNPQKSTFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCMM 310

Query: 286 SSEEQIKRALDFFMNKLDWTPEEISKYPIVLFLSFEKRVIPRSSILQHLISKGFIKKT-S 345
            SE +I R +++F+N+++  P  I++ P+VLF S EKR+IPR S+ + L+S G +K+  S
Sbjct: 311 LSERKINRTMEYFVNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDWS 370

Query: 346 VGKAFMIREDKFLVKFVMQYLSKDPHLLEMY 374
           +    +  E  FL K V++Y  + P L+ +Y
Sbjct: 371 LTSLLVPVEKVFLEKLVIKYEEELPELMNLY 399

[Close]

BLAST of Moc08g01750 vs. TAIR 10
Match: AT1G21150.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 176.8 bits (447), Expect = 3.3e-44
Identity = 99/330 (30.00%), Postives = 170/330 (51.52%), Query Frame = 0


Query: 46  TVDYLVRTLGLSKDSAVAVAKRIHLKRTANPDSVIALFEAYGFAPSNTASIFCRNPSLLL 105
           TV YLV + GLS +SA + ++ + L  +  PDSV+ALF+ +GF      S+    P +L 
Sbjct: 58  TVSYLVDSCGLSLESAKSNSRFVKLVSSKKPDSVLALFKDHGFTNDQITSVIKSFPRVLS 117

Query: 106 ADPDTTLKPKLEFLSQNGVSGQVLVDVISRDPSILRRSLDKQIIPCIDFLRNFFGSTDGI 165
             P+  + PKL F S  G S      +IS  P +L  SL K++IPC D L++     + +
Sbjct: 118 LSPEDVISPKLMFFSSIGFSTSDTAKMISSSPKMLSYSLHKRLIPCYDSLKSILVEEESV 177

Query: 166 VSLFSARRGTWVLHKFSESVAPNIERLRAYGVPDSNIAKMIWVRPRTLSRDAEGFIDIVE 225
           V         + L K +  V+  +   R  GVPD +I  ++   P T       F +++ 
Sbjct: 178 VKCLKRGIRCFSL-KITHCVSLRVSICRELGVPDKSIKWLVQASPFTFFSRERRFNEVLN 237

Query: 226 KTKEAGFNPSSLMFIYGLCTFSGMKKDKWLSKLQVFKSFGWSEEQFQSLFLKQPKFMNSS 285
           +    GF+P    F++ +  F    +     K ++F+ FGWS+E F +  ++ P  +  S
Sbjct: 238 RVCSYGFDPKKAGFVHAMVAFDCTSESAMERKFKLFQCFGWSKEDFVAAIMRFPNCVTVS 297

Query: 286 EEQIKRALDFFMNKLDWTPEEISKYPIVLFLSFEKRVIPRSSILQHLISKGFIKKTSVG- 345
           +E+I   L++ +N +     +I   P+VL LS EKR+ PR+ ++  L+SKG +KK  +  
Sbjct: 298 DEKIMYTLEYLVNNIGLQARDIVARPVVLSLSMEKRIKPRNQVISLLLSKGLVKKEDINY 357

Query: 346 -KAFMIREDKFLVKFVMQYLSKDPHLLEMY 374
                ++  +F+ KFV++Y  + P L++ +
Sbjct: 358 FTILKLKSSEFMDKFVLKYQDEMPQLVQPF 386

[Close]

BLAST of Moc08g01750 vs. TAIR 10
Match: AT1G61980.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 144.1 bits (362), Expect = 2.4e-34
Identity = 112/397 (28.21%), Postives = 188/397 (47.36%), Query Frame = 0


Query: 30  NSFSSLS------QISQSTNNRTVDYLVRTLGLSKDSAVAVAKRIHLKRTANPDSVIALF 89
           NSFSS S      ++ +   + TV YLV +LGL K  A +V++++  +   NPDSV+ L 
Sbjct: 32  NSFSSASAARLSPRVGRKGKSFTVSYLVDSLGLPKKLAESVSRKVSFEDKDNPDSVLNLL 91

Query: 90  EAYGFAPSNTASIFCRNPSLLLADPDTTLKPKLEFLSQNGVSGQVLVDVISRDPSILRRS 149
            ++GF  S  ++I    P LL+AD + +L PKL+FL   G S   L +++S  P IL + 
Sbjct: 92  RSHGFTDSQISTIVTDYPQLLVADAEKSLAPKLQFLQSRGASSSELTEIVSTVPKILGKR 151

Query: 150 LDKQIIPCIDFLRNFF--GSTDGIVSLFSARRGTWVLHKFSESVAPNIERLRAYGVPDSN 209
             K I    DF++      S+    S     +G        E+   N+  LR  G+P   
Sbjct: 152 GHKTISVFYDFIKETLLDKSSKSEKSCQPFPQGN------LENKIRNLSVLRELGMPH-- 211

Query: 210 IAKMIWVRPRTLSRDA-----EGFIDIVEKTKEAGFNPSSLMFIYGLC------------ 269
             K+++  P  +S D      E F + ++K  E GF+PS+  F+  LC            
Sbjct: 212 --KLLF--PLLISCDVPVFGKEKFEESLKKVVEMGFDPSTSKFVEALCVVQRLSDKNIED 271

Query: 270 -----------------------TFSGMKKDKWLSKLQVFKSFGWSEEQFQSLFLKQPKF 329
                                   F    + K L+ ++ F   G+S ++F  L  + P+ 
Sbjct: 272 KVNAYKRLGFDVEYVWTVFKRWPNFLTHSEKKILNTIETFLGLGFSRDEFSVLIKRFPQG 331

Query: 330 MNSSEEQIKRALDFFMNKLDWTPEEISKYPIVLFLSFEKRVIPRSSILQHLISKGFI--K 375
           +  S E +K+  +F + K++W  + +   P VL  S EKR +PR +++Q LISKG I  +
Sbjct: 332 IGLSAEMVKKKTEFLVKKMNWPLKALVSNPAVLGYSLEKRTVPRGNVVQALISKGLIGSE 391

[Close]

BLAST of Moc08g01750 vs. TAIR 10
Match: AT5G64950.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 142.5 bits (358), Expect = 6.9e-34
Identity = 93/345 (26.96%), Postives = 178/345 (51.59%), Query Frame = 0


Query: 26  SIGLNSFSSLSQISQSTNNRTVDYLVRTLGLSKDSAVAVAKRI-HLKRTANPDSVIALFE 85
           ++ L+ FSS +  +  +N   V++L R  G  K  A+A+A R  +LK    P SVI + +
Sbjct: 21  ALSLHHFSSNATPASISNPAFVEFL-RDNGFQKPLAIAIAMRYPNLKSLEQPRSVIQMLK 80

Query: 86  AYGFAPSNTASIFCRNPSLLLADPDTTLKPKLEFLSQNGVSGQVLVDVISRDPSILRRSL 145
           +Y F+ +        +P ++  + +  L+PKL F    G +G  L   +S++ S++  SL
Sbjct: 81  SYSFSDTQIQKSIRVHPRMMFYNVEKILEPKLRFFKDIGFTGSGLGKFVSQNSSVVGVSL 140

Query: 146 DKQIIPCIDFLRNFFGSTDGIVSLFSARRGTWVLHKFSES--VAPNIERLRAYGVPDSNI 205
            K++IP ++ L++        + +  +R G W+L     +  + PNI  L   G+  S +
Sbjct: 141 VKKLIPTVEILKSIVAPKHEDLPVILSRCG-WLLLSRDPNLFLLPNISYLETCGIVGSQL 200

Query: 206 AKMIWVRPRTLSRDAEGFIDIVEKTKEAGFNPSSLMFIYGLCTFSGMKKDKWLSKLQVFK 265
           A ++  +PR  +   E     V +  + GF  +S M ++ + + S + +  +  K+++F 
Sbjct: 201 ASLLRRQPRIFNLSEEKLRGYVSRALDLGFTLNSRMLVHAVISLSSLSEKTFDRKVKLFM 260

Query: 266 SFGWSEEQFQSLFLKQPKFMNSSEEQIKRALDFFMNKLDWTPEEISKYPIVLFLSFEKRV 325
           + G+SE++   +  + P  +  SE+++    +F++ ++    E ++K P VL  + EKRV
Sbjct: 261 ANGFSEDEITDIIRRSPGLIRCSEDKLTLGFEFYLKRMGLEREALAKRPCVLSYNLEKRV 320

Query: 326 IPRSSILQHLISKGFIKKTSVGKAFMI-----REDKFLVKFVMQY 363
           IPR  +LQ L  KG + K    K  M+      E+ FL K+V+++
Sbjct: 321 IPRLKVLQILREKGLLLKEEKKKKNMVGIVEMTEEAFLEKYVVRF 363

[Close]

BLAST of Moc08g01750 vs. TAIR 10
Match: AT1G61990.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 136.3 bits (342), Expect = 5.0e-32
Identity = 107/392 (27.30%), Postives = 177/392 (45.15%), Query Frame = 0


Query: 30  NSFSSLSQISQST------NNRTVDYLVRTLGLSKDSAVAVAKRIHLKRTANPDSVIALF 89
           NSFSS      S        N TV YLV +LGLSK  A ++++++  +   NPDSV++LF
Sbjct: 32  NSFSSARAADVSIRDGRKGKNFTVSYLVDSLGLSKKLAESISRKVSFEDKVNPDSVLSLF 91

Query: 90  EAYGFAPSNTASIFCRNPSLLLADPDTTLKPKLEFLSQNGVSGQVLVDVISRDPSILRRS 149
            +YGF  S  ++I    P LL+AD    L  KL+ L   G S   + +++S  P IL + 
Sbjct: 92  RSYGFTDSQISTIITDYPLLLVADAKKALGRKLQILQSRGASSSEITEIVSTVPRILGK- 151

Query: 150 LDKQIIPCIDFLRNFF-GSTDGIVSLFSARRGTWVLHKFSESVAPNIERLRAYGVPDSNI 209
             K I    D +++     T     L    +G  +          N+  LR  G+P   +
Sbjct: 152 --KSITVYYDAVKDIIVADTSSSYELPQGSQGNKI---------RNVSALRELGMPSRLL 211

Query: 210 AKMIWVRPRTLSRDAEGFIDIVEKTKEAGFNPSSLMFIYGLCTFSGMKKDKWLSKLQVFK 269
             ++  + + +    E F   ++K  E GF+P++  F+  L     M +     K+ VF+
Sbjct: 212 LPLLVSKSQPVC-GKENFDASLKKVVEMGFDPTTTKFVLALRMLYQMSEKTIEEKVVVFR 271

Query: 270 SFGWSEEQFQSLFLKQP--------KFMNSSE---------------------------E 329
           S G++ +    +F K P        K + S+E                           E
Sbjct: 272 SLGFTVDDVWEIFKKTPSVLKVSKKKILKSAETFLDLGYSRAEFLMMVKRYPPCIEYSVE 331

Query: 330 QIKRALDFFMNKLDWTPEEISKYPIVLFLSFEKRVIPRSSILQHLISKGFIKKTS----V 376
            +K+  +F + K+ W    +  +P V   S EKR+IPR +IL+ L+SKG ++K S    V
Sbjct: 332 SVKKKNEFLVKKMKWPRNALVLHPQVFGYSMEKRIIPRCNILEALLSKGLLRKGSELPAV 391

The following BLAST results are available for this feature:

BLAST of Moc08g01750 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022132136.1	3.3e-211	100.00	transcription termination factor MTERF8, chloroplastic-like [Momordica charantia...	[more]
XP_023537739.1	1.7e-175	82.63	uncharacterized protein LOC111798674 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_023537738.1	4.9e-175	82.37	uncharacterized protein LOC111798674 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022951074.1	8.4e-175	82.89	uncharacterized protein LOC111454032 [Cucurbita moschata] >XP_022951075.1 unchar...	[more]
XP_023537741.1	8.4e-175	82.63	uncharacterized protein LOC111798675 isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Moc08g01750 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZL6	1.4e-07	22.26	Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidop...	[more]
Q9FK23	1.9e-07	19.54	Transcription termination factor MTERF8, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q84X53	2.0e-06	27.54	Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX...	[more]
Q9M219	7.8e-06	19.75	Transcription termination factor MTEF18, mitochondrial OS=Arabidopsis thaliana O...	[more]
F4IHL3	2.5e-04	23.44	Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana O...	[more]

BLAST of Moc08g01750 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BRE6	1.6e-211	100.00	transcription termination factor MTERF8, chloroplastic-like OS=Momordica charant...	[more]
A0A6J1GHP2	4.1e-175	82.89	uncharacterized protein LOC111454032 OS=Cucurbita moschata OX=3662 GN=LOC1114540...	[more]
A0A6J1GGM9	4.5e-174	81.84	uncharacterized protein LOC111454031 OS=Cucurbita moschata OX=3662 GN=LOC1114540...	[more]
A0A6J1KMV5	7.7e-174	82.89	uncharacterized protein LOC111496044 OS=Cucurbita maxima OX=3661 GN=LOC111496044...	[more]
A0A6J1KSF9	2.9e-173	81.84	uncharacterized protein LOC111496045 OS=Cucurbita maxima OX=3661 GN=LOC111496045...	[more]

BLAST of Moc08g01750 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G07900.1	1.9e-52	34.44	Mitochondrial transcription termination factor family protein	[more]
AT1G21150.1	3.3e-44	30.00	Mitochondrial transcription termination factor family protein	[more]
AT1G61980.1	2.4e-34	28.21	Mitochondrial transcription termination factor family protein	[more]
AT5G64950.1	6.9e-34	26.96	Mitochondrial transcription termination factor family protein	[more]
AT1G61990.1	5.0e-32	27.30	Mitochondrial transcription termination factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 94..125 e-value: 0.011 score: 24.9 coord: 203..233 e-value: 1800.0 score: 2.0 coord: 304..338 e-value: 40.0 score: 13.1 coord: 272..303 e-value: 4.4 score: 16.3 coord: 130..162 e-value: 0.046 score: 22.9 coord: 237..267 e-value: 1600.0 score: 2.2
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 249..354 e-value: 4.2E-16 score: 58.8 coord: 81..237 e-value: 2.9E-16 score: 59.3
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 8..377
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 169..366 e-value: 1.1E-35 score: 125.1
None	No IPR available	PANTHER	PTHR13068:SF187	SUBFAMILY NOT NAMED	coord: 8..377

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc08g01750.1	Moc08g01750.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0032502	developmental process
biological_process	GO:0006353	DNA-templated transcription, termination
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0003690	double-stranded DNA binding