Moc07g26570 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc07g26570
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Dynein beta chain, ciliary protein
Location	chr7: 19838516 .. 19841398 (+)
RNA-Seq Expression	Moc07g26570
Synteny	Moc07g26570

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGACAGGCATTTCGTCGAGCGGCTGGAAGAATCAAACCTGCTTCGAGCATCGATTCCACCGCCTCTTCGTTGAAAATGGAGAGCGTCGTCGATCGGAGGCCTCCGCCGCGTGCGATCCAGAAGGCTGAGGTGCCGCAGCCTCGAGAGAGCGGCGCCCTTGATTCAGGTAATTGTAATTTGTTAATCGTTTTTTAGGTCTTCTTGGCGTTTTTTCTTGAATTTCTGCTCGAGTTTTCTTTCTGGCACTTCTAGAATCGAGGCTGAATGCTCTCGGAGAAAGATTCTGTTTCTCCATTGAATAAAATGCAGTTCTATAGAGTTTCTTTGAGTTCTAAAAGAATCGAGGCTGAATGCTCCCGAAGAAAGATTCTGTTCCTCCGTTGAATAGAATGCTGTTATGTAGAGTTTCTTTGTGTTCTAAACCATCAGATTTCGATAACGAGCCTGATTTTTCGACAACATCCTTTCCTTCTCCTTTCTCTAAATTCCTTTGGTCGCAGCATTTCTCTATTAGAGTTTTGTCGATTTTAGCAGTCACGGCTCATTTATTACTTACTCCAGTTACTGTATTCTTCTTTCGTCGTTTTTTGTTGGCCTTTTGTCTATATGAACCGAATATCTTCTGGTTTCTGTTCATCATCGCCTCTCTCTCCTCATTAACGTTTGATTTTGTAGGAGGTTAACTTCTTAAAGTTTTATATAGTGATCGATGCTGAACTTGAGTTGCACTTGCTTCTAAGATTGTGAAGTTTATTCCGATTTTACTATTTCTGTTAGTTATACTTATTGAAACTAAGGTTTCGTTCTCTGTTTCTATTGCTTATTTTCTGTGGACGTGGTTAACTTATTACAGTTTTGTATGGAGAGATCTTTTTGGTTCTGAGCTTTGAGTTATCCTGAGTTAGTTATATTGAATCAAAGGTTAAGTAGTTTTTTCTTATCTGTTATATGCTCTCTGCTTTTATTGCCTATTTTTTCTTTAGCCACTGCTTCCGTTGATTTAGGCTTCCAATGTCTAAGGATGTAAAGAATATCAGAGCATAGAGGCCAAGTGCTAGGGATTGTTGCATGATCTTAAAGAAGATTTATCTTCTGAAGTATACTGATATTCCAGGTGGAATTTCTTTTTGTTTGATTCTCTTTCTTCGTTGAACCAAACGCAGTTCAATAGAATTCATCAGATTTTTATAGTGAGCTGATTTTTTGGGAGCGGTTAATTTGGAATGGCAATAAAGATTGATTCGCTGGGGAACTGCTTATAAAATTACGGACAAATCTGAACAATAGCTATTAGAAATGCGTGTAAATCATAAAGCCAAACTGTTGGATGGAAACTTTTAGATCACTCCAGAGTCCGTTTGATGATTTTTTTTTTTGGCTGATGGGAATTGATTCATAGGTAGGATGTAATATAACTGAATGCTAACCGTTTTCAATTGTTTATTCAGGTGGTATCTTGGGAAGTAACTCTGAAAATGTGCCCGAAGAACGAGACCCTCAGTTCGACGCCATGCTTGGCCAAATGGTGGGCCGAATTAAATCCAAACCTGGAGGAAAACTTGAGATGGGGGAGGTAAGTTTCCATAAGAAGTAGCCAAATTACTCTTAGTATAATATGAGGCATTGAATACAAATTTACACTTCTTAAAAATGTAGAGCATGATTCGGTACTACCTCTCTATTCTTTTTCTCCAGTAATAATCCTTGATGTCTGAGCCAATTTACCCTCTGTCCAGTCCTCATAAAGAGTAATCCATATTGCTAGTAAATTACTTCAGATTGTTTGATTAATGATCACTATGGTGGAGAGTATAATTTAAATTCATGATTTAAAAAGCATATAAGTTTATAGTTCGTCTCTTTAATTGTCAGGAGAAAAAGAAATCCAATCCAAGATGCACCACAATTTTTTAAAAACTGCATTGCCTCATAAAGGGAGGTTCCTTCCTACTTTTTTGACGTGGTTTGTTTTTGATGATTTAAAGTATTGGTGGGTAAATTACATAAGAAAGTAACTAGTTCTTTTCTTACTGATAAGCATACAAGTTTATTCTTAGTTCTGGAAGAGATTTTTCTAAGGCTGGCTTAGGGGTTTCGCTTTTCTTTGGCCATTTTTTAAATGAAAAATCTGCCTCCCATTTATGACGTTTCCTCCAACCCTTTTGTTTTTAATTTTCTGTTCTTTGAAAATTATGATTGCTCGGTCACAATTTCTTTCTAATGTTTTCACATCAGCTCAATTCCAAAACAAAAACAAGATTTTGAAAACTATATATATATTTTTATTGTTTTCAAAATTTGACTTACCCATTGAAAACAAAGAAAAAGTAGTGTTTGCCAGAGCTCCAAAGGGCAACCAAATTGACAAGAACTTGAGGTCTTTTAGTCATATTGGTTTAGAGGCCTCTACTTCGAACTTTCTAGTAAGTTTAATATAAAAAATCCTTGATGGCTCATGGGATCAGGTTTTGGGGCTCGGGTGCTCCTGCATCTAATAAGAATGGTTAAAATGGTTATGAAAGTAACTCAAATTTGTAGGGAGGTGTTATGAGAATGAATTTTATGATTTGCGTGATAATGTAACAGGCGGCTGTGGTGGAGAGATATGAGAGGCCAATGCCGAAGCTGCGGAATACAGATGTAAAATCGAGTAGATACGAAGATCGGCCAGCTCCACCAGGAACTCTAAACGTAGCTCAGATGCGCCACGTGATTCAACTGCATGAAGGAAAGGCTGAGGATCACAATGGGACAATGGCCGTTCAACAAATTGCTCAAAGGTATAATGTTAGTGTTACACAAATACACACCATTTTGCAGTTTCTGTCTCTGCCTCCTGAGGACACTCTTAGAGCCAAAAACAAGGATCCTAATTCCTAA

mRNA sequence

ATGGGACAGGCATTTCGTCGAGCGGCTGGAAGAATCAAACCTGCTTCGAGCATCGATTCCACCGCCTCTTCGTTGAAAATGGAGAGCGTCGTCGATCGGAGGCCTCCGCCGCGTGCGATCCAGAAGGCTGAGGTGCCGCAGCCTCGAGAGAGCGGCGCCCTTGATTCAGGTGGTATCTTGGGAAGTAACTCTGAAAATGTGCCCGAAGAACGAGACCCTCAGTTCGACGCCATGCTTGGCCAAATGGTGGGCCGAATTAAATCCAAACCTGGAGGAAAACTTGAGATGGGGGAGGCGGCTGTGGTGGAGAGATATGAGAGGCCAATGCCGAAGCTGCGGAATACAGATGTAAAATCGAGTAGATACGAAGATCGGCCAGCTCCACCAGGAACTCTAAACGTAGCTCAGATGCGCCACGTGATTCAACTGCATGAAGGAAAGGCTGAGGATCACAATGGGACAATGGCCGTTCAACAAATTGCTCAAAGGTATAATGTTAGTGTTACACAAATACACACCATTTTGCAGTTTCTGTCTCTGCCTCCTGAGGACACTCTTAGAGCCAAAAACAAGGATCCTAATTCCTAA

Coding sequence (CDS)

ATGGGACAGGCATTTCGTCGAGCGGCTGGAAGAATCAAACCTGCTTCGAGCATCGATTCCACCGCCTCTTCGTTGAAAATGGAGAGCGTCGTCGATCGGAGGCCTCCGCCGCGTGCGATCCAGAAGGCTGAGGTGCCGCAGCCTCGAGAGAGCGGCGCCCTTGATTCAGGTGGTATCTTGGGAAGTAACTCTGAAAATGTGCCCGAAGAACGAGACCCTCAGTTCGACGCCATGCTTGGCCAAATGGTGGGCCGAATTAAATCCAAACCTGGAGGAAAACTTGAGATGGGGGAGGCGGCTGTGGTGGAGAGATATGAGAGGCCAATGCCGAAGCTGCGGAATACAGATGTAAAATCGAGTAGATACGAAGATCGGCCAGCTCCACCAGGAACTCTAAACGTAGCTCAGATGCGCCACGTGATTCAACTGCATGAAGGAAAGGCTGAGGATCACAATGGGACAATGGCCGTTCAACAAATTGCTCAAAGGTATAATGTTAGTGTTACACAAATACACACCATTTTGCAGTTTCTGTCTCTGCCTCCTGAGGACACTCTTAGAGCCAAAAACAAGGATCCTAATTCCTAA

Protein sequence

MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRRPPPRAIQKAEVPQPRESGALDSGGILGSNSENVPEERDPQFDAMLGQMVGRIKSKPGGKLEMGEAAVVERYERPMPKLRNTDVKSSRYEDRPAPPGTLNVAQMRHVIQLHEGKAEDHNGTMAVQQIAQRYNVSVTQIHTILQFLSLPPEDTLRAKNKDPNS

Homology

[Close]

BLAST of Moc07g26570 vs. NCBI nr
Match: XP_022138356.1 (uncharacterized protein LOC111009550 [Momordica charantia])

HSP 1 Score: 382.1 bits (980), Expect = 2.9e-102
Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0


Query: 1   MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRRPPPRAIQKAEVPQPRESGALDSGGIL 60
           MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRRPPPRAIQKAEVPQPRESGALDSGGIL
Sbjct: 1   MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRRPPPRAIQKAEVPQPRESGALDSGGIL 60

Query: 61  GSNSENVPEERDPQFDAMLGQMVGRIKSKPGGKLEMGEAAVVERYERPMPKLRNTDVKSS 120
           GSNSENVPEERDPQFDAMLGQMVGRIKSKPGGKLEMGEAAVVERYERPMPKLRNTDVKSS
Sbjct: 61  GSNSENVPEERDPQFDAMLGQMVGRIKSKPGGKLEMGEAAVVERYERPMPKLRNTDVKSS 120

Query: 121 RYEDRPAPPGTLNVAQMRHVIQLHEGKAEDHNGTMAVQQIAQRYNVSVTQIHTILQFLSL 180
           RYEDRPAPPGTLNVAQMRHVIQLHEGKAEDHNGTMAVQQIAQRYNVSVTQIHTILQFLSL
Sbjct: 121 RYEDRPAPPGTLNVAQMRHVIQLHEGKAEDHNGTMAVQQIAQRYNVSVTQIHTILQFLSL 180

Query: 181 PPEDTLRAKNKDPNS 196
           PPEDTLRAKNKDPNS
Sbjct: 181 PPEDTLRAKNKDPNS 195

[Close]

BLAST of Moc07g26570 vs. NCBI nr
Match: XP_023547640.1 (uncharacterized protein LOC111806523 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 308.1 bits (788), Expect = 5.3e-80
Identity = 158/191 (82.72%), Postives = 172/191 (90.05%), Query Frame = 0


Query: 1   MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRRPPPRAIQKAEVPQPRESGALDSGGIL 60
           MGQAFRRAAGRIKPASSIDS+ASSLKMESVVDR+PPPRA++KA     RESGALDSG  L
Sbjct: 1   MGQAFRRAAGRIKPASSIDSSASSLKMESVVDRKPPPRAVEKA-----RESGALDSGDDL 60

Query: 61  GSNSENVPEERDPQFDAMLGQMVGRIKSKPGGKLEMGEAAVVERYERPMPKLRNTDVKSS 120
           GSNSENV EERDPQFDAML QM GRI+SKPGGKLEMGEA+VVERY+RPMP+LRNTD+KSS
Sbjct: 61  GSNSENVLEERDPQFDAMLSQMAGRIRSKPGGKLEMGEASVVERYDRPMPRLRNTDLKSS 120

Query: 121 RYEDRPAPPGTLNVAQMRHVIQLHEGKAEDHNGTMAVQQIAQRYNVSVTQIHTILQFLSL 180
           +YEDRPAPPGTLNVAQMRH+I LHEGKAEDH+G M V QIA+RYNV V QI TILQFLSL
Sbjct: 121 KYEDRPAPPGTLNVAQMRHIILLHEGKAEDHDGPMGVNQIAERYNVGVAQIRTILQFLSL 180

Query: 181 PPEDTLRAKNK 192
           PPED+LR K K
Sbjct: 181 PPEDSLRDKKK 186

[Close]

BLAST of Moc07g26570 vs. NCBI nr
Match: XP_022958820.1 (uncharacterized protein LOC111459975 [Cucurbita moschata])

HSP 1 Score: 307.8 bits (787), Expect = 6.9e-80
Identity = 157/191 (82.20%), Postives = 172/191 (90.05%), Query Frame = 0


Query: 1   MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRRPPPRAIQKAEVPQPRESGALDSGGIL 60
           MGQAFRRAAGRIKPASSIDS+ASSLKMESVVDR+PPPRA +KA     RESGALDSG +L
Sbjct: 1   MGQAFRRAAGRIKPASSIDSSASSLKMESVVDRKPPPRAAEKA-----RESGALDSGDVL 60

Query: 61  GSNSENVPEERDPQFDAMLGQMVGRIKSKPGGKLEMGEAAVVERYERPMPKLRNTDVKSS 120
           GSNSENV EERDPQFDAML QM GRI+SKPGGKLEMGEA+VVERY+RPMP+LRNTD+KSS
Sbjct: 61  GSNSENVLEERDPQFDAMLSQMAGRIRSKPGGKLEMGEASVVERYDRPMPRLRNTDLKSS 120

Query: 121 RYEDRPAPPGTLNVAQMRHVIQLHEGKAEDHNGTMAVQQIAQRYNVSVTQIHTILQFLSL 180
           +YEDRPAPPGTLNVAQMRH++ LHEGKAEDH+G M V QIA+RYNV V QI TILQFLSL
Sbjct: 121 KYEDRPAPPGTLNVAQMRHIMLLHEGKAEDHDGPMGVNQIAERYNVGVAQIRTILQFLSL 180

Query: 181 PPEDTLRAKNK 192
           PPED+LR K K
Sbjct: 181 PPEDSLRDKKK 186

[Close]

BLAST of Moc07g26570 vs. NCBI nr
Match: KAG7013632.1 (hypothetical protein SDJN02_23799 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 307.4 bits (786), Expect = 9.0e-80
Identity = 157/191 (82.20%), Postives = 172/191 (90.05%), Query Frame = 0


Query: 1   MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRRPPPRAIQKAEVPQPRESGALDSGGIL 60
           MGQAFRRAAGRIKPASSIDS+ASSLKMESVVDR+PPPRA +KA     RESGALDSG +L
Sbjct: 1   MGQAFRRAAGRIKPASSIDSSASSLKMESVVDRKPPPRAAEKA-----RESGALDSGDVL 60

Query: 61  GSNSENVPEERDPQFDAMLGQMVGRIKSKPGGKLEMGEAAVVERYERPMPKLRNTDVKSS 120
           GSNSENV EERDPQFDAML QM GRI+SKPGGKLEMGEA+VVERY+RPMP+LRNTD+KSS
Sbjct: 61  GSNSENVLEERDPQFDAMLSQMAGRIRSKPGGKLEMGEASVVERYDRPMPRLRNTDLKSS 120

Query: 121 RYEDRPAPPGTLNVAQMRHVIQLHEGKAEDHNGTMAVQQIAQRYNVSVTQIHTILQFLSL 180
           +YEDRPAPPGTLNVAQMRH+I LHEGKAEDH+G M V QIA+RYNV V QI TILQFLSL
Sbjct: 121 KYEDRPAPPGTLNVAQMRHIILLHEGKAEDHDGPMGVNQIAERYNVGVAQIRTILQFLSL 180

Query: 181 PPEDTLRAKNK 192
           PPED+L+ K K
Sbjct: 181 PPEDSLQDKKK 186

[Close]

BLAST of Moc07g26570 vs. NCBI nr
Match: XP_023006464.1 (uncharacterized protein LOC111499180 [Cucurbita maxima])

HSP 1 Score: 304.7 bits (779), Expect = 5.8e-79
Identity = 156/191 (81.68%), Postives = 171/191 (89.53%), Query Frame = 0


Query: 1   MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRRPPPRAIQKAEVPQPRESGALDSGGIL 60
           MGQAFRRAAGRIKPASSIDS+ASSLKMESVVDR+PPPRA +KA     RESG+LDSG +L
Sbjct: 1   MGQAFRRAAGRIKPASSIDSSASSLKMESVVDRKPPPRAAEKA-----RESGSLDSGDVL 60

Query: 61  GSNSENVPEERDPQFDAMLGQMVGRIKSKPGGKLEMGEAAVVERYERPMPKLRNTDVKSS 120
           GSNS NV EERDPQFDAML QM GRI+SKPGGKLEMGEA+VVERY RPMPKLRNTD+KSS
Sbjct: 61  GSNSGNVLEERDPQFDAMLSQMAGRIRSKPGGKLEMGEASVVERYNRPMPKLRNTDLKSS 120

Query: 121 RYEDRPAPPGTLNVAQMRHVIQLHEGKAEDHNGTMAVQQIAQRYNVSVTQIHTILQFLSL 180
           +YEDRPAPPGTLNVAQMRH+I LHEGKA+DH+G M V QIA+RYNV V+QI TILQFLSL
Sbjct: 121 KYEDRPAPPGTLNVAQMRHIILLHEGKADDHDGPMGVNQIAERYNVGVSQIRTILQFLSL 180

Query: 181 PPEDTLRAKNK 192
           PPED+LR K K
Sbjct: 181 PPEDSLRDKKK 186

[Close]

BLAST of Moc07g26570 vs. ExPASy TrEMBL
Match: A0A6J1C9H1 (uncharacterized protein LOC111009550 OS=Momordica charantia OX=3673 GN=LOC111009550 PE=4 SV=1)

HSP 1 Score: 382.1 bits (980), Expect = 1.4e-102
Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0


Query: 1   MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRRPPPRAIQKAEVPQPRESGALDSGGIL 60
           MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRRPPPRAIQKAEVPQPRESGALDSGGIL
Sbjct: 1   MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRRPPPRAIQKAEVPQPRESGALDSGGIL 60

Query: 61  GSNSENVPEERDPQFDAMLGQMVGRIKSKPGGKLEMGEAAVVERYERPMPKLRNTDVKSS 120
           GSNSENVPEERDPQFDAMLGQMVGRIKSKPGGKLEMGEAAVVERYERPMPKLRNTDVKSS
Sbjct: 61  GSNSENVPEERDPQFDAMLGQMVGRIKSKPGGKLEMGEAAVVERYERPMPKLRNTDVKSS 120

Query: 121 RYEDRPAPPGTLNVAQMRHVIQLHEGKAEDHNGTMAVQQIAQRYNVSVTQIHTILQFLSL 180
           RYEDRPAPPGTLNVAQMRHVIQLHEGKAEDHNGTMAVQQIAQRYNVSVTQIHTILQFLSL
Sbjct: 121 RYEDRPAPPGTLNVAQMRHVIQLHEGKAEDHNGTMAVQQIAQRYNVSVTQIHTILQFLSL 180

Query: 181 PPEDTLRAKNKDPNS 196
           PPEDTLRAKNKDPNS
Sbjct: 181 PPEDTLRAKNKDPNS 195

[Close]

BLAST of Moc07g26570 vs. ExPASy TrEMBL
Match: A0A6J1H4J6 (uncharacterized protein LOC111459975 OS=Cucurbita moschata OX=3662 GN=LOC111459975 PE=4 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 3.3e-80
Identity = 157/191 (82.20%), Postives = 172/191 (90.05%), Query Frame = 0


Query: 1   MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRRPPPRAIQKAEVPQPRESGALDSGGIL 60
           MGQAFRRAAGRIKPASSIDS+ASSLKMESVVDR+PPPRA +KA     RESGALDSG +L
Sbjct: 1   MGQAFRRAAGRIKPASSIDSSASSLKMESVVDRKPPPRAAEKA-----RESGALDSGDVL 60

Query: 61  GSNSENVPEERDPQFDAMLGQMVGRIKSKPGGKLEMGEAAVVERYERPMPKLRNTDVKSS 120
           GSNSENV EERDPQFDAML QM GRI+SKPGGKLEMGEA+VVERY+RPMP+LRNTD+KSS
Sbjct: 61  GSNSENVLEERDPQFDAMLSQMAGRIRSKPGGKLEMGEASVVERYDRPMPRLRNTDLKSS 120

Query: 121 RYEDRPAPPGTLNVAQMRHVIQLHEGKAEDHNGTMAVQQIAQRYNVSVTQIHTILQFLSL 180
           +YEDRPAPPGTLNVAQMRH++ LHEGKAEDH+G M V QIA+RYNV V QI TILQFLSL
Sbjct: 121 KYEDRPAPPGTLNVAQMRHIMLLHEGKAEDHDGPMGVNQIAERYNVGVAQIRTILQFLSL 180

Query: 181 PPEDTLRAKNK 192
           PPED+LR K K
Sbjct: 181 PPEDSLRDKKK 186

[Close]

BLAST of Moc07g26570 vs. ExPASy TrEMBL
Match: A0A6J1L288 (uncharacterized protein LOC111499180 OS=Cucurbita maxima OX=3661 GN=LOC111499180 PE=4 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 2.8e-79
Identity = 156/191 (81.68%), Postives = 171/191 (89.53%), Query Frame = 0


Query: 1   MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRRPPPRAIQKAEVPQPRESGALDSGGIL 60
           MGQAFRRAAGRIKPASSIDS+ASSLKMESVVDR+PPPRA +KA     RESG+LDSG +L
Sbjct: 1   MGQAFRRAAGRIKPASSIDSSASSLKMESVVDRKPPPRAAEKA-----RESGSLDSGDVL 60

Query: 61  GSNSENVPEERDPQFDAMLGQMVGRIKSKPGGKLEMGEAAVVERYERPMPKLRNTDVKSS 120
           GSNS NV EERDPQFDAML QM GRI+SKPGGKLEMGEA+VVERY RPMPKLRNTD+KSS
Sbjct: 61  GSNSGNVLEERDPQFDAMLSQMAGRIRSKPGGKLEMGEASVVERYNRPMPKLRNTDLKSS 120

Query: 121 RYEDRPAPPGTLNVAQMRHVIQLHEGKAEDHNGTMAVQQIAQRYNVSVTQIHTILQFLSL 180
           +YEDRPAPPGTLNVAQMRH+I LHEGKA+DH+G M V QIA+RYNV V+QI TILQFLSL
Sbjct: 121 KYEDRPAPPGTLNVAQMRHIILLHEGKADDHDGPMGVNQIAERYNVGVSQIRTILQFLSL 180

Query: 181 PPEDTLRAKNK 192
           PPED+LR K K
Sbjct: 181 PPEDSLRDKKK 186

[Close]

BLAST of Moc07g26570 vs. ExPASy TrEMBL
Match: A0A0A0KCC5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G196710 PE=4 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 3.6e-74
Identity = 151/193 (78.24%), Postives = 168/193 (87.05%), Query Frame = 0


Query: 1   MGQAFRRAAGRIKPASSIDS-TASSLKMESVVDRRPPPRAIQKAEVPQPRESGALDSGGI 60
           MGQAFRRAAGRIKPASSIDS TASSLKMES+VDR+PPPR  +KA     RESGALDSG +
Sbjct: 1   MGQAFRRAAGRIKPASSIDSTTASSLKMESIVDRKPPPRVAEKA-----RESGALDSGDV 60

Query: 61  LGSNSENVPEERDPQFDAMLGQMVGRIKSKPGGKLEMGEAAVVERYERPMPKLRNTDVKS 120
             S+S N+ EERDPQFDAML QMVGRIKSKPGGKLEMGEA+VVERY RPMPKLR+T++ S
Sbjct: 61  PASDSGNMLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVERYGRPMPKLRDTNISS 120

Query: 121 SRYEDRPAPPGTLNVAQMRHVIQLHEGKAEDHNGTMAVQQIAQRYNVSVTQIHTILQFLS 180
           S+YEDRPAPPGTLNVAQMR +I LHEGKA+DH+G M + QIA+RYNVSV QI TILQFLS
Sbjct: 121 SKYEDRPAPPGTLNVAQMRQIILLHEGKADDHDGPMGLHQIAERYNVSVAQIQTILQFLS 180

Query: 181 LPPEDTLRAKNKD 193
           LPPED+LR K KD
Sbjct: 181 LPPEDSLRDKIKD 188

[Close]

BLAST of Moc07g26570 vs. ExPASy TrEMBL
Match: A0A1S3C957 (uncharacterized protein LOC103497865 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497865 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 5.1e-73
Identity = 149/193 (77.20%), Postives = 166/193 (86.01%), Query Frame = 0


Query: 1   MGQAFRRAAGRIKPASSIDS-TASSLKMESVVDRRPPPRAIQKAEVPQPRESGALDSGGI 60
           MGQAFRRAAGRIKPASS+DS TASSLKMES+VDR+PPPR  +KA     RESG+LDSG +
Sbjct: 1   MGQAFRRAAGRIKPASSVDSTTASSLKMESIVDRKPPPRVAEKA-----RESGSLDSGDV 60

Query: 61  LGSNSENVPEERDPQFDAMLGQMVGRIKSKPGGKLEMGEAAVVERYERPMPKLRNTDVKS 120
             S+S N  EERDPQFDAML QMVGRIKSKPGGKLEMGEA+VVERY RPMPKLR+T++KS
Sbjct: 61  TASDSGNRLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVERYGRPMPKLRDTNIKS 120

Query: 121 SRYEDRPAPPGTLNVAQMRHVIQLHEGKAEDHNGTMAVQQIAQRYNVSVTQIHTILQFLS 180
           S+YEDRPAPPGTLNVAQMR +I LHEGKA+DH+G M   QIA+RYNVSV QI TILQFLS
Sbjct: 121 SKYEDRPAPPGTLNVAQMRQIILLHEGKADDHDGPMGPHQIAERYNVSVAQIQTILQFLS 180

Query: 181 LPPEDTLRAKNKD 193
           LPPED+LR K  D
Sbjct: 181 LPPEDSLRDKITD 188

[Close]

BLAST of Moc07g26570 vs. TAIR 10
Match: AT3G21400.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 29 Blast hits to 29 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 171.4 bits (433), Expect = 7.2e-43
Identity = 95/193 (49.22%), Postives = 127/193 (65.80%), Query Frame = 0


Query: 1   MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRRPPPRAIQKAEVPQPRESGALDSGGIL 60
           MGQ  RRA G+IK       +  S      +DRR  P     A    P  + A+D     
Sbjct: 1   MGQQLRRAVGKIKEVERSSPSRVS------IDRRSLPTEELSAVKSSP-STAAVDGVSDK 60

Query: 61  G--SNSENVPEERDPQFDAMLGQMVGRIKSKPGGKLEMGEAAVVERYERPMPKLRNTDVK 120
           G  ++ +NV EERDP++D ML QMVGRIK+KPGGK EMGEA+VVE  +RP+PKLRNT  +
Sbjct: 61  GRRTSEDNVLEERDPKYDTMLNQMVGRIKAKPGGKAEMGEASVVETSKRPLPKLRNTTPE 120

Query: 121 SSRYEDRPAPPGTLNVAQMRHVIQLHEGKAEDHNGTMAVQQIAQRYNVSVTQIHTILQFL 180
           S+RYE+ P P GTLNVAQ+RH++ L +GK++DH+G M V +IA++Y + V+Q+  I QFL
Sbjct: 121 STRYEENPVPQGTLNVAQVRHIMLLFQGKSQDHHGPMGVNEIAEKYRIDVSQVQKITQFL 180

Query: 181 SLPPEDTLRAKNK 192
           SLP E T + K +
Sbjct: 181 SLPQEITDKQKKQ 186

The following BLAST results are available for this feature:

BLAST of Moc07g26570 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022138356.1	2.9e-102	100.00	uncharacterized protein LOC111009550 [Momordica charantia]	[more]
XP_023547640.1	5.3e-80	82.72	uncharacterized protein LOC111806523 [Cucurbita pepo subsp. pepo]	[more]
XP_022958820.1	6.9e-80	82.20	uncharacterized protein LOC111459975 [Cucurbita moschata]	[more]
KAG7013632.1	9.0e-80	82.20	hypothetical protein SDJN02_23799 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023006464.1	5.8e-79	81.68	uncharacterized protein LOC111499180 [Cucurbita maxima]	[more]

BLAST of Moc07g26570 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc07g26570 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C9H1	1.4e-102	100.00	uncharacterized protein LOC111009550 OS=Momordica charantia OX=3673 GN=LOC111009...	[more]
A0A6J1H4J6	3.3e-80	82.20	uncharacterized protein LOC111459975 OS=Cucurbita moschata OX=3662 GN=LOC1114599...	[more]
A0A6J1L288	2.8e-79	81.68	uncharacterized protein LOC111499180 OS=Cucurbita maxima OX=3661 GN=LOC111499180...	[more]
A0A0A0KCC5	3.6e-74	78.24	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G196710 PE=4 SV=1	[more]
A0A1S3C957	5.1e-73	77.20	uncharacterized protein LOC103497865 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of Moc07g26570 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G21400.1	7.2e-43	49.22	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..71
None	No IPR available	PANTHER	PTHR36759:SF1	DYNEIN BETA CHAIN, CILIARY PROTEIN	coord: 1..191
None	No IPR available	PANTHER	PTHR36759	DYNEIN BETA CHAIN, CILIARY PROTEIN	coord: 1..191

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc07g26570.1	Moc07g26570.1	mRNA