Moc07g23280 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc07g23280
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionPlus3 domain-containing protein
Locationchr7: 17219340 .. 17219813 (-)
RNA-Seq ExpressionMoc07g23280
SyntenyMoc07g23280
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTCGGTAGGTGGGGCTGGTTGGATTTCATTAGAGCTAAGTACGAGATTCCAAGTTGCATAGGTATTAGATATCCTGAGCGAGGTGAGATGTTGGAGGAACCACCAACTAGACACGTCGAGTTTTACCTGAGGATTTTCGAGTTCGTTGTGTGTCTTCCATTGCCAGCTTTTGCTCAAGAATTCCTTAGTGAGGTTACCCTAGAACCAGCTCAGCTTACTCCCAACAGGTGGGGCATGCTGTACAAGTGCTACTACTCGTGGCAGATGGAGTGTGAACGTAGGGAACGTTAGGACTTGTATCGCACTGAGCTGCTCACAATCAACCAGATGCTCGACATTCACATCCTTAAGAGTGTATCTAAAGTAGAATCTAGGAACTACTCCTGCACCCGACCTGGGACTGGGGTAGTTATCAAGCATCCTTTTTCTGGAAGGTCCAATGGTTCTACGTATTCGGGGAATGGCTACTAA

mRNA sequence

ATGCTCGGTAGGTGGGGCTGGTTGGATTTCATTAGAGCTAAGTACGAGATTCCAAGTTGCATAGGTATTAGATATCCTGAGCGAGGTGAGATGTTGGAGGAACCACCAACTAGACACGTCGAGTTTTACCTGAGGATTTTCGAGTTCGTTGTGTGTCTTCCATTGCCAGCTTTTGCTCAAGAATTCCTTAGTGAGGTTACCCTAGAACCAGCTCAGCTTACTCCCAACAGGTGGGGCATGCTGTACAAGTGCTACTACTCGTGGCAGATGGAGTGTGAACGTAGGGAACAATCTAGGAACTACTCCTGCACCCGACCTGGGACTGGGGTAGTTATCAAGCATCCTTTTTCTGGAAGGTCCAATGGTTCTACGTATTCGGGGAATGGCTACTAA

Coding sequence (CDS)

ATGCTCGGTAGGTGGGGCTGGTTGGATTTCATTAGAGCTAAGTACGAGATTCCAAGTTGCATAGGTATTAGATATCCTGAGCGAGGTGAGATGTTGGAGGAACCACCAACTAGACACGTCGAGTTTTACCTGAGGATTTTCGAGTTCGTTGTGTGTCTTCCATTGCCAGCTTTTGCTCAAGAATTCCTTAGTGAGGTTACCCTAGAACCAGCTCAGCTTACTCCCAACAGGTGGGGCATGCTGTACAAGTGCTACTACTCGTGGCAGATGGAGTGTGAACGTAGGGAACAATCTAGGAACTACTCCTGCACCCGACCTGGGACTGGGGTAGTTATCAAGCATCCTTTTTCTGGAAGGTCCAATGGTTCTACGTATTCGGGGAATGGCTACTAA

Protein sequence

MLGRWGWLDFIRAKYEIPSCIGIRYPERGEMLEEPPTRHVEFYLRIFEFVVCLPLPAFAQEFLSEVTLEPAQLTPNRWGMLYKCYYSWQMECERREQSRNYSCTRPGTGVVIKHPFSGRSNGSTYSGNGY
Homology
BLAST of Moc07g23280 vs. NCBI nr
Match: XP_022159063.1 (uncharacterized protein LOC111025502, partial [Momordica charantia])

HSP 1 Score: 75.5 bits (184), Expect = 3.8e-10
Identity = 42/133 (31.58%), Postives = 61/133 (45.86%), Query Frame = 0

Query: 7   WLDFIRAKYEIPSCIGIRYPERGEMLEEPPTRHVEFYLRIFEFVVCLPLPAFAQEFLSEV 66
           +L  +R  + IP  I +R PE GE  + PP   V  Y ++FE+ + LPL  F QEFL   
Sbjct: 55  YLGSLRRGFAIPENILLRLPEEGERADNPPEGWVTLYFKMFEYGLRLPLHPFVQEFLFRT 114

Query: 67  TLEPAQLTPNRWGMLYKCYYSWQMECERREQS----------------------RNYSCT 118
            L PAQ+ PN WG+++     + +     E++                      R Y C 
Sbjct: 115 GLAPAQVAPNGWGVIFALAILFWLRARDSEEAELXDVDQLLACFEAKRIAKKPGRFYMCA 174

BLAST of Moc07g23280 vs. NCBI nr
Match: XP_024046698.1 (uncharacterized protein LOC112101034 [Citrus clementina])

HSP 1 Score: 63.2 bits (152), Expect = 2.0e-06
Identity = 29/81 (35.80%), Postives = 45/81 (55.56%), Query Frame = 0

Query: 8   LDFIRAKYEIPSCIGIRYPERGEMLEEPPTRHVEFYLRIFEFVVCLPLPAFAQEFLSEVT 67
           LD +RA+Y+IP  I +R P + +   +PP  +V  +L+ F+F +  PL  +    LS + 
Sbjct: 119 LDDLRARYDIPDYIPLRIPGKKDTHSQPPRGYVTLFLKSFKFGMKCPLQPYFARMLSGLN 178

Query: 68  LEPAQLTPNRWGMLYKCYYSW 89
           L P QL PN W +L   +  W
Sbjct: 179 LTPGQLNPNGWRVLSGLFILW 199

BLAST of Moc07g23280 vs. NCBI nr
Match: KAF3434557.1 (hypothetical protein FNV43_RR21642 [Rhamnella rubrinervis])

HSP 1 Score: 61.2 bits (147), Expect = 7.5e-06
Identity = 28/80 (35.00%), Postives = 42/80 (52.50%), Query Frame = 0

Query: 14  KYEIPSCIGIRYPERGEMLEEPPTRHVEFYLRIFEFVVCLPLPAFAQEFLSEVTLEPAQL 73
           +Y IP  + +R PE GE+  +P T  +   +  F   + +P PAF + F  E  L P QL
Sbjct: 37  EYNIPLDVTLRVPEEGEVPSQPRTGEIAITIPAFYCGLRVPFPAFIRRFFHEAPLHPVQL 96

Query: 74  TPNRWGMLYKCYYSWQMECE 94
           +P+ W ++   Y  WQ E E
Sbjct: 97  SPSAWQIVLGTYIHWQRENE 116

BLAST of Moc07g23280 vs. NCBI nr
Match: XP_024951578.1 (uncharacterized protein LOC102623403 [Citrus sinensis])

HSP 1 Score: 60.8 bits (146), Expect = 9.7e-06
Identity = 27/81 (33.33%), Postives = 45/81 (55.56%), Query Frame = 0

Query: 8   LDFIRAKYEIPSCIGIRYPERGEMLEEPPTRHVEFYLRIFEFVVCLPLPAFAQEFLSEVT 67
           L+ +RAKY IP  + +R P +GE  + P +  V  ++ IF+  +CLPL  F ++  +E+ 
Sbjct: 116 LERVRAKYNIPQSVHLRVPRKGERPDHPHSDGVALHIDIFDLSLCLPLQPFFRKMFTEMK 175

Query: 68  LEPAQLTPNRWGMLYKCYYSW 89
           + P QL+   W +L      W
Sbjct: 176 IAPGQLSLPGWRLLTGLEVLW 196

BLAST of Moc07g23280 vs. NCBI nr
Match: XP_024955606.1 (uncharacterized protein At3g60930, chloroplastic-like [Citrus sinensis])

HSP 1 Score: 59.7 bits (143), Expect = 2.2e-05
Identity = 28/83 (33.73%), Postives = 44/83 (53.01%), Query Frame = 0

Query: 11  IRAKYEIPSCIGIRYPERGEMLEEPPTRHVEFYLRIFEFVVCLPLPAFAQEFLSEVTLEP 70
           +R  Y+I   I +R P + +    PP  HV  +L  F+F + LPL  +  + LS + L P
Sbjct: 120 LRTIYDILDGIHLRIPGKKDTPNRPPRGHVTLFLENFKFGMRLPLQLYFVQMLSGLHLAP 179

Query: 71  AQLTPNRWGMLYKCYYSWQMECE 94
           +QL PN W +L+  +  W   C+
Sbjct: 180 SQLNPNGWRVLFSLFILWSRCCQ 202

BLAST of Moc07g23280 vs. ExPASy TrEMBL
Match: A0A6J1DXS5 (uncharacterized protein LOC111025502 OS=Momordica charantia OX=3673 GN=LOC111025502 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 1.9e-10
Identity = 42/133 (31.58%), Postives = 61/133 (45.86%), Query Frame = 0

Query: 7   WLDFIRAKYEIPSCIGIRYPERGEMLEEPPTRHVEFYLRIFEFVVCLPLPAFAQEFLSEV 66
           +L  +R  + IP  I +R PE GE  + PP   V  Y ++FE+ + LPL  F QEFL   
Sbjct: 55  YLGSLRRGFAIPENILLRLPEEGERADNPPEGWVTLYFKMFEYGLRLPLHPFVQEFLFRT 114

Query: 67  TLEPAQLTPNRWGMLYKCYYSWQMECERREQS----------------------RNYSCT 118
            L PAQ+ PN WG+++     + +     E++                      R Y C 
Sbjct: 115 GLAPAQVAPNGWGVIFALAILFWLRARDSEEAELXDVDQLLACFEAKRIAKKPGRFYMCA 174

BLAST of Moc07g23280 vs. ExPASy TrEMBL
Match: A0A2H5QXX9 (Uncharacterized protein (Fragment) OS=Citrus unshiu OX=55188 GN=CUMW_289390 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 3.1e-05
Identity = 27/86 (31.40%), Postives = 43/86 (50.00%), Query Frame = 0

Query: 8   LDFIRAKYEIPSCIGIRYPERGEMLEEPPTRHVEFYLRIFEFVVCLPLPAFAQEFLSEVT 67
           LD +R +Y IP  I ++ P + +    PP  +V  YL  F++ +  PL  +    L+ + 
Sbjct: 72  LDDLRLRYSIPGEIPLKIPGKKDAPSRPPRGYVTLYLDSFKYGLRCPLQPYFARILNGLN 131

Query: 68  LEPAQLTPNRWGMLYKCYYSWQMECE 94
           L P QL PN W +L   +  W   C+
Sbjct: 132 LSPGQLNPNGWRVLSGLFILWDRCCQ 157

BLAST of Moc07g23280 vs. ExPASy TrEMBL
Match: A0A5C7HBX5 (Plus3 domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_018932 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 4.0e-05
Identity = 33/86 (38.37%), Postives = 43/86 (50.00%), Query Frame = 0

Query: 12  RAKYEIPSCIGIRYPERGEMLEEPPTR-HVEFYLRIFEFVVCLPLPAFAQEFLSEVTLEP 71
           R KY IP+ I +R PE+G++   PP    V      FEF V LP   F +  L  +   P
Sbjct: 368 RVKYGIPNNIVLRLPEKGQLASSPPQESEVALLSASFEFGVNLPFHPFLRYMLRRLNCAP 427

Query: 72  AQLTPNRWGMLYKCYYSWQMECERRE 97
           AQL PN W  L   Y  W+ +C+  E
Sbjct: 428 AQLGPNVWRALIGTYIIWK-QCQLPE 452

BLAST of Moc07g23280 vs. ExPASy TrEMBL
Match: A0A6J5W4Q9 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS5559 PE=3 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 4.0e-05
Identity = 27/81 (33.33%), Postives = 42/81 (51.85%), Query Frame = 0

Query: 8   LDFIRAKYEIPSCIGIRYPERGEMLEEPPTRHVEFYLRIFEFVVCLPLPAFAQEFLSEVT 67
           L+ ++A Y IP C+G+R P   E    PP   V  +  +++  + LPL  + Q  LS + 
Sbjct: 748 LESLKADYAIPDCVGLRLPIPTEAARYPPEGCVMVFSAMYKHGLRLPLHPWVQMMLSRLG 807

Query: 68  LEPAQLTPNRWGMLYKCYYSW 89
             P Q  PN W +L+  Y +W
Sbjct: 808 YAPGQYNPNFWCILHGVYIAW 828

BLAST of Moc07g23280 vs. ExPASy TrEMBL
Match: A0A2N9I8F6 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS48286 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 5.2e-05
Identity = 31/89 (34.83%), Postives = 41/89 (46.07%), Query Frame = 0

Query: 8   LDFIRAKYEIPSCIGIRYPERGEMLEEPPTRHVEFYLRIFEFVVCLPLPAFAQEFLSEVT 67
           LD  R KY+IP  I +R PE  E+        V FY   F   V  PL    +E L  + 
Sbjct: 202 LDRYRRKYQIPEDIVLRIPESDEVACSSRYGDVAFYEADFNAGVRFPLQPLMRELLDRLN 261

Query: 68  LEPAQLTPNRWGMLYKCYYSWQMECERRE 97
           L P QL PN W  +  C   W++  E ++
Sbjct: 262 LSPGQLAPNAWRTVVGCMVMWKVLSEGKD 290

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022159063.13.8e-1031.58uncharacterized protein LOC111025502, partial [Momordica charantia][more]
XP_024046698.12.0e-0635.80uncharacterized protein LOC112101034 [Citrus clementina][more]
KAF3434557.17.5e-0635.00hypothetical protein FNV43_RR21642 [Rhamnella rubrinervis][more]
XP_024951578.19.7e-0633.33uncharacterized protein LOC102623403 [Citrus sinensis][more]
XP_024955606.12.2e-0533.73uncharacterized protein At3g60930, chloroplastic-like [Citrus sinensis][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DXS51.9e-1031.58uncharacterized protein LOC111025502 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A2H5QXX93.1e-0531.40Uncharacterized protein (Fragment) OS=Citrus unshiu OX=55188 GN=CUMW_289390 PE=4... [more]
A0A5C7HBX54.0e-0538.37Plus3 domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_018932 PE... [more]
A0A6J5W4Q94.0e-0533.33Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS5559 PE=3... [more]
A0A2N9I8F65.2e-0534.83Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS48286 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc07g23280.1Moc07g23280.1mRNA