Moc07g22160 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc07g22160
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Ring finger protein, putative
Location	chr7: 16272451 .. 16273406 (+)
RNA-Seq Expression	Moc07g22160
Synteny	Moc07g22160

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGGGTTCGGGTATGAACTTGGTTACCACTGTGATCGGGTTCGGAATGAGTGCCACATTCATAGTGTTCGTCTGCACAAGAATCATATGCGGCAGGCTTCGTTCATCTGATTCCACCACACCCAATTACGAGATTGAGTCCAGACTTGATCTTGAGCGCCAGGTATTTTGTTTTCATCTTCCCTGGATCTGCAGTGCACACCATGTTTCTTCCCCATATCCTGTAATTTGCTGCTGTGATTCTGAATCTGATACACTTGTAGATCATGAATCCCATTGGTTTGATCCATTTTTGGTGTGCCTGTGCCTCATTGGATCTATATAGTGAAGTAGTTAGGAGATCGTGAACCCTTACTGGTTCTTTTGATTGCAGCCAGAGTCTCGGCGTAGCGGTCTCGAACCGGTTCTCATAGCGGCCATACCTACGATGAAGTTCAATCGGGAGGCTTTCAGTTCTGTAGAAGATGCCCAGTAAGTAGAACTGCTTCATTCACATTGCACCTGAGAAAAAGTTTTAAGTGTTTCTTGTAGAACTGATATACAAGTAGATGATAAACTAACTCATTGAACTATGGATCATTTTACTCCACTTCTAGGTGCTCAATCTGTCTGGGTGACTATGAAGAGAAGGAAGTACTGAGAATAATGCCCAAATGTGGTCACAGTTTCCATCTTTCCTGCATTGATGAATGGCTGAGAAAGCAATCTACCTGTCCAGTTTGCAGGCTGCCATTGCAAGAATCTTTTGTTACAAAACCTGTAAGACCAGTAACTGTGAGCAGAGATCAATCTTTTGATGCTTCTGAGATTTCTACTGACCATCATTCTCGACACTGGCTTATATCCGACCCCAGCCGTTCGGAGGGCAACACAAGCAGCCAAGCATGGGGGCTTGAACCTGTACCTGTACCTGTAAACTCGTCGGTTCAAAGAGAGATGGAAATGAGACAATGA

mRNA sequence

ATGACGGGTTCGGGTATGAACTTGGTTACCACTGTGATCGGGTTCGGAATGAGTGCCACATTCATAGTGTTCGTCTGCACAAGAATCATATGCGGCAGGCTTCGTTCATCTGATTCCACCACACCCAATTACGAGATTGAGTCCAGACTTGATCTTGAGCGCCAGCCAGAGTCTCGGCGTAGCGGTCTCGAACCGGTTCTCATAGCGGCCATACCTACGATGAAGTTCAATCGGGAGGCTTTCAGTTCTGTAGAAGATGCCCAGTGCTCAATCTGTCTGGGTGACTATGAAGAGAAGGAAGTACTGAGAATAATGCCCAAATGTGGTCACAGTTTCCATCTTTCCTGCATTGATGAATGGCTGAGAAAGCAATCTACCTGTCCAGTTTGCAGGCTGCCATTGCAAGAATCTTTTGTTACAAAACCTGTAAGACCAGTAACTGTGAGCAGAGATCAATCTTTTGATGCTTCTGAGATTTCTACTGACCATCATTCTCGACACTGGCTTATATCCGACCCCAGCCGTTCGGAGGGCAACACAAGCAGCCAAGCATGGGGGCTTGAACCTGTACCTGTACCTGTAAACTCGTCGGTTCAAAGAGAGATGGAAATGAGACAATGA

Coding sequence (CDS)

ATGACGGGTTCGGGTATGAACTTGGTTACCACTGTGATCGGGTTCGGAATGAGTGCCACATTCATAGTGTTCGTCTGCACAAGAATCATATGCGGCAGGCTTCGTTCATCTGATTCCACCACACCCAATTACGAGATTGAGTCCAGACTTGATCTTGAGCGCCAGCCAGAGTCTCGGCGTAGCGGTCTCGAACCGGTTCTCATAGCGGCCATACCTACGATGAAGTTCAATCGGGAGGCTTTCAGTTCTGTAGAAGATGCCCAGTGCTCAATCTGTCTGGGTGACTATGAAGAGAAGGAAGTACTGAGAATAATGCCCAAATGTGGTCACAGTTTCCATCTTTCCTGCATTGATGAATGGCTGAGAAAGCAATCTACCTGTCCAGTTTGCAGGCTGCCATTGCAAGAATCTTTTGTTACAAAACCTGTAAGACCAGTAACTGTGAGCAGAGATCAATCTTTTGATGCTTCTGAGATTTCTACTGACCATCATTCTCGACACTGGCTTATATCCGACCCCAGCCGTTCGGAGGGCAACACAAGCAGCCAAGCATGGGGGCTTGAACCTGTACCTGTACCTGTAAACTCGTCGGTTCAAAGAGAGATGGAAATGAGACAATGA

Protein sequence

MTGSGMNLVTTVIGFGMSATFIVFVCTRIICGRLRSSDSTTPNYEIESRLDLERQPESRRSGLEPVLIAAIPTMKFNREAFSSVEDAQCSICLGDYEEKEVLRIMPKCGHSFHLSCIDEWLRKQSTCPVCRLPLQESFVTKPVRPVTVSRDQSFDASEISTDHHSRHWLISDPSRSEGNTSSQAWGLEPVPVPVNSSVQREMEMRQ

Homology

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BLAST of Moc07g22160 vs. NCBI nr
Match: XP_022156138.1 (putative RING-H2 finger protein ATL69 [Momordica charantia])

HSP 1 Score: 417.9 bits (1073), Expect = 5.0e-113
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0


Query: 1   MTGSGMNLVTTVIGFGMSATFIVFVCTRIICGRLRSSDSTTPNYEIESRLDLERQPESRR 60
           MTGSGMNLVTTVIGFGMSATFIVFVCTRIICGRLRSSDSTTPNYEIESRLDLERQPESRR
Sbjct: 1   MTGSGMNLVTTVIGFGMSATFIVFVCTRIICGRLRSSDSTTPNYEIESRLDLERQPESRR 60

Query: 61  SGLEPVLIAAIPTMKFNREAFSSVEDAQCSICLGDYEEKEVLRIMPKCGHSFHLSCIDEW 120
           SGLEPVLIAAIPTMKFNREAFSSVEDAQCSICLGDYEEKEVLRIMPKCGHSFHLSCIDEW
Sbjct: 61  SGLEPVLIAAIPTMKFNREAFSSVEDAQCSICLGDYEEKEVLRIMPKCGHSFHLSCIDEW 120

Query: 121 LRKQSTCPVCRLPLQESFVTKPVRPVTVSRDQSFDASEISTDHHSRHWLISDPSRSEGNT 180
           LRKQSTCPVCRLPLQESFVTKPVRPVTVSRDQSFDASEISTDHHSRHWLISDPSRSEGNT
Sbjct: 121 LRKQSTCPVCRLPLQESFVTKPVRPVTVSRDQSFDASEISTDHHSRHWLISDPSRSEGNT 180

Query: 181 SSQAWGLEPVPVPVNSSVQREMEMRQ 207
           SSQAWGLEPVPVPVNSSVQREMEMRQ
Sbjct: 181 SSQAWGLEPVPVPVNSSVQREMEMRQ 206

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BLAST of Moc07g22160 vs. NCBI nr
Match: XP_004153610.1 (RING-H2 finger protein ATL5 [Cucumis sativus] >KGN46203.1 hypothetical protein Csa_004984 [Cucumis sativus])

HSP 1 Score: 348.2 bits (892), Expect = 4.8e-92
Identity = 170/206 (82.52%), Postives = 187/206 (90.78%), Query Frame = 0


Query: 1   MTGSGMNLVTTVIGFGMSATFIVFVCTRIICGRLRSSDSTTPNYEIESRLDLERQPESRR 60
           MTGSGMNL+TTVIGFGMSATFIVFVCTRIICGRLRS+ S TPNYEIESRLDLE+QPESR 
Sbjct: 1   MTGSGMNLITTVIGFGMSATFIVFVCTRIICGRLRSAQSNTPNYEIESRLDLEQQPESRA 60

Query: 61  SGLEPVLIAAIPTMKFNREAFSSVEDAQCSICLGDYEEKEVLRIMPKCGHSFHLSCIDEW 120
           SGLEPVLIAAIPTM F+REAFSS+EDAQCSICLG+YEEKEVLRIMPKCGHSFHL+CID W
Sbjct: 61  SGLEPVLIAAIPTMTFDREAFSSIEDAQCSICLGEYEEKEVLRIMPKCGHSFHLTCIDVW 120

Query: 121 LRKQSTCPVCRLPLQESFVTKPVRPVTVSRDQSFDASEISTDHHSRHWLISDPSRSEGNT 180
           LRKQSTCPVCRLPLQ+SF TKP RP+TVSRDQSFD SEISTDHHS+HWL+  P+RSEGNT
Sbjct: 121 LRKQSTCPVCRLPLQDSFRTKPARPMTVSRDQSFDGSEISTDHHSQHWLLPGPNRSEGNT 180

Query: 181 SSQAWGLEPVPVPVNSSVQREMEMRQ 207
           S+Q+   +  P+PVN + QREME  Q
Sbjct: 181 SNQS---QLQPIPVNPAAQREMETIQ 203

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BLAST of Moc07g22160 vs. NCBI nr
Match: XP_008460164.1 (PREDICTED: RING-H2 finger protein ATL5-like [Cucumis melo] >KAA0040031.1 RING-H2 finger protein ATL5-like [Cucumis melo var. makuwa])

HSP 1 Score: 346.3 bits (887), Expect = 1.8e-91
Identity = 169/206 (82.04%), Postives = 186/206 (90.29%), Query Frame = 0


Query: 1   MTGSGMNLVTTVIGFGMSATFIVFVCTRIICGRLRSSDSTTPNYEIESRLDLERQPESRR 60
           MTGSGMNL+TTVIGFGMSATFIVFVCTRIICGRLRS+ S TPNYEIESRLDLE+QPESR 
Sbjct: 1   MTGSGMNLITTVIGFGMSATFIVFVCTRIICGRLRSAQSNTPNYEIESRLDLEQQPESRA 60

Query: 61  SGLEPVLIAAIPTMKFNREAFSSVEDAQCSICLGDYEEKEVLRIMPKCGHSFHLSCIDEW 120
           SGLEPVLIAAIPT KF++EAFSS EDAQCSICLG+YEEKEVLRIMPKCGHSFHL+CID W
Sbjct: 61  SGLEPVLIAAIPTTKFDQEAFSSAEDAQCSICLGEYEEKEVLRIMPKCGHSFHLTCIDVW 120

Query: 121 LRKQSTCPVCRLPLQESFVTKPVRPVTVSRDQSFDASEISTDHHSRHWLISDPSRSEGNT 180
           LRKQSTCP+CRLPLQ+SF TKP RP+TVSRDQSFD SEISTDHHS+HWL+  P+RSEGNT
Sbjct: 121 LRKQSTCPICRLPLQDSFRTKPARPMTVSRDQSFDGSEISTDHHSQHWLLPGPNRSEGNT 180

Query: 181 SSQAWGLEPVPVPVNSSVQREMEMRQ 207
           S+Q+   +  P+PVN S QREME  Q
Sbjct: 181 SNQS---QLQPIPVNPSAQREMETIQ 203

[Close]

BLAST of Moc07g22160 vs. NCBI nr
Match: XP_038876418.1 (RING-H2 finger protein ATL72-like [Benincasa hispida])

HSP 1 Score: 346.3 bits (887), Expect = 1.8e-91
Identity = 170/206 (82.52%), Postives = 187/206 (90.78%), Query Frame = 0


Query: 1   MTGSGMNLVTTVIGFGMSATFIVFVCTRIICGRLRSSDSTTPNYEIESRLDLERQPESRR 60
           MTGSGMNL+TTVIGFGMSATFIVFVCTRIICGRLRS+ S+TP+YEIESR+DLE+QPESR 
Sbjct: 1   MTGSGMNLITTVIGFGMSATFIVFVCTRIICGRLRSAQSSTPSYEIESRVDLEQQPESRA 60

Query: 61  SGLEPVLIAAIPTMKFNREAFSSVEDAQCSICLGDYEEKEVLRIMPKCGHSFHLSCIDEW 120
           SGLEPV IAAIPT KF+REAFSSVEDAQCSICLG+YEEKEVLRIMPKCGHSFHL+CID W
Sbjct: 61  SGLEPVFIAAIPTTKFDREAFSSVEDAQCSICLGEYEEKEVLRIMPKCGHSFHLTCIDVW 120

Query: 121 LRKQSTCPVCRLPLQESFVTKPVRPVTVSRDQSFDASEISTDHHSRHWLISDPSRSEGNT 180
           LRKQSTCPVCRLPLQ+SF TKP RP+TVSRDQSFD SEISTDHHS+HWL+  P+RSEGNT
Sbjct: 121 LRKQSTCPVCRLPLQDSFRTKPARPMTVSRDQSFDGSEISTDHHSQHWLLPGPNRSEGNT 180

Query: 181 SSQAWGLEPVPVPVNSSVQREMEMRQ 207
           S+Q+      P+PVN SVQREME  Q
Sbjct: 181 SNQS---HLQPIPVNPSVQREMETVQ 203

[Close]

BLAST of Moc07g22160 vs. NCBI nr
Match: TYK24470.1 (RING-H2 finger protein ATL5-like [Cucumis melo var. makuwa])

HSP 1 Score: 335.9 bits (860), Expect = 2.5e-88
Identity = 168/214 (78.50%), Postives = 185/214 (86.45%), Query Frame = 0


Query: 1   MTGSGMNLVTTVIGFGMSATFIVFVCTRIICGRLRSSDSTTPNYEIESRLDLERQ----- 60
           MTGSGMNL+TTVIGFGMSATFIVFVCTRIICGRLRS+ S TPNYEIESRLDLE+Q     
Sbjct: 1   MTGSGMNLITTVIGFGMSATFIVFVCTRIICGRLRSAQSNTPNYEIESRLDLEQQYSGVA 60

Query: 61  ---PESRRSGLEPVLIAAIPTMKFNREAFSSVEDAQCSICLGDYEEKEVLRIMPKCGHSF 120
               ESR SGLEPVLIAAIPT KF++EAFSS EDAQCSICLG+YEEKEVLRIMPKCGHSF
Sbjct: 61  KDWKESRASGLEPVLIAAIPTTKFDQEAFSSAEDAQCSICLGEYEEKEVLRIMPKCGHSF 120

Query: 121 HLSCIDEWLRKQSTCPVCRLPLQESFVTKPVRPVTVSRDQSFDASEISTDHHSRHWLISD 180
           HL+CID WLRKQSTCP+CRLPLQ+SF TKP RP+TVSRDQSFD SEISTDHHS+HWL+  
Sbjct: 121 HLTCIDVWLRKQSTCPICRLPLQDSFRTKPARPMTVSRDQSFDGSEISTDHHSQHWLLPG 180

Query: 181 PSRSEGNTSSQAWGLEPVPVPVNSSVQREMEMRQ 207
           P+RSEGNTS+Q+   +  P+PVN S QREME  Q
Sbjct: 181 PNRSEGNTSNQS---QLQPIPVNPSAQREMETIQ 211

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BLAST of Moc07g22160 vs. ExPASy Swiss-Prot
Match: Q9LZJ6 (RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.2e-16
Identity = 47/150 (31.33%), Postives = 78/150 (52.00%), Query Frame = 0


Query: 55  QPESRRSGLEPVLIAAIPTMKFNREAFSSVEDAQCSICLGDYEEKEVLRIMPKCGHSFHL 114
           Q  S  S L+P ++  IP   ++ +   S  + +CS+CL ++EE +  R++PKCGH FH+
Sbjct: 80  QSSSSLSPLDPTVLEKIPIFVYSVKTHESPLE-ECSVCLSEFEEDDEGRVLPKCGHVFHV 139

Query: 115 SCIDEWLRKQSTCPVCRLPLQESFVTKPVRPVTVSRDQSFDASEISTDHHSRHWLISDPS 174
            CID W R +S+CP+CR P+Q      P +PVT     +     +     +     S   
Sbjct: 140 DCIDTWFRSRSSCPLCRAPVQ------PAQPVTEPEPVAAVFPSVKPIEDTEAGSSSSSD 199

Query: 175 RSEGNTSSQAWGLEPVPVPVNSSVQREMEM 205
            SE +T S + G  PV  P+ +  +  +++
Sbjct: 200 ESESSTPSSSSG-SPVRFPMEACEREPIDL 221

[Close]

BLAST of Moc07g22160 vs. ExPASy Swiss-Prot
Match: Q9LUL6 (Putative RING-H2 finger protein ATL61 OS=Arabidopsis thaliana OX=3702 GN=ATL61 PE=3 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 5.9e-16
Identity = 55/171 (32.16%), Postives = 86/171 (50.29%), Query Frame = 0


Query: 5   GMNLVTTVIGFGMSATFIVFVCTRIICGRLRSSDSTTPNYEIESRLDLERQPESRRSGLE 64
           G+N+V     FG+SA   V V   I C      D    N   +  + +  +    R G++
Sbjct: 13  GINIVFAFFFFGISA---VVVSCIIKCYNTHDDDHDHDNNN-DGHVSITIK---ERVGIK 72

Query: 65  PVLIAAIPTMKFNREAFSSVEDAQCSICLGDYEEKEVLRIMPKCGHSFHLSCIDEWLRKQ 124
           P ++ +IP + FN + F  V   +C +CL +  + +  R++P C H FH+ CID WL+  
Sbjct: 73  PYVLRSIPIVDFNTKDFKYV--LECVVCLSELADGDKARVLPSCDHWFHVECIDSWLQSN 132

Query: 125 STCPVC--RLPLQESFVTKPVRPVTVSRDQSFDASEISTDHHSRHWLISDP 174
           STCP+C  R+ L++S      RP    RD+SF+ +   T  H  H   +DP
Sbjct: 133 STCPICRKRVCLKQS----RTRPELGGRDKSFNQNHDQTSEH--HEFSTDP 168

[Close]

BLAST of Moc07g22160 vs. ExPASy Swiss-Prot
Match: Q9SRM0 (RING-H2 finger protein ATL66 OS=Arabidopsis thaliana OX=3702 GN=ATL66 PE=2 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 5.9e-16
Identity = 31/83 (37.35%), Postives = 52/83 (62.65%), Query Frame = 0


Query: 53  ERQPESRRSGLEPVLIAAIPTMKFNREAFSSVEDAQCSICLGDYEEKEVLRIMPKCGHSF 112
           +R    R  GL+P  I ++P +   RE     E+ +C ICLG +EE E ++++P C H +
Sbjct: 71  DRLTRCRSGGLDPAEIRSLPVVLCRRERAEEEEEKECCICLGGFEEGEKMKVLPPCSHCY 130

Query: 113 HLSCIDEWLRKQSTCPVCRLPLQ 136
           H  C+D WL+ +S+CP+CR+ ++
Sbjct: 131 HCECVDRWLKTESSCPLCRVSIR 153

[Close]

BLAST of Moc07g22160 vs. ExPASy Swiss-Prot
Match: Q5XF85 (E3 ubiquitin-protein ligase ATL42 OS=Arabidopsis thaliana OX=3702 GN=ATL42 PE=1 SV=2)

HSP 1 Score: 84.7 bits (208), Expect = 1.3e-15
Identity = 42/128 (32.81%), Postives = 68/128 (53.12%), Query Frame = 0


Query: 8   LVTTVIGFGMSATFIVFVCTRIICGRLRSSDSTTPNYEIESR----LDLERQPESRRSGL 67
           +VT V+    + TF++ V  +     LRS       ++   R     +       R SGL
Sbjct: 39  VVTGVLAIMFALTFVLLVYAKCCHIDLRSGSGDRRRHDRRLRQGIFFNRSTASSDRFSGL 98

Query: 68  EPVLIAAIPTMKFNREAFSSVEDAQCSICLGDYEEKEVLRIMPKCGHSFHLSCIDEWLRK 127
           +   I ++P  +F+     S +   CS+CL  +E  E+LR++PKC H+FH+ CID+WL +
Sbjct: 99  DKTAIESLPLFRFS-ALKGSKQGLDCSVCLSKFESVEILRLLPKCRHAFHIGCIDQWLEQ 158

Query: 128 QSTCPVCR 132
            +TCP+CR
Sbjct: 159 HATCPLCR 165

[Close]

BLAST of Moc07g22160 vs. ExPASy Swiss-Prot
Match: O22255 (RING-H2 finger protein ATL64 OS=Arabidopsis thaliana OX=3702 GN=ATL64 PE=2 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.3e-15
Identity = 34/81 (41.98%), Postives = 52/81 (64.20%), Query Frame = 0


Query: 59  RRSGLEPVLIAAIPTMKF-NREAFSSVEDAQCSICLGDYEEKEVLRIMPKCGHSFHLSCI 118
           R   L+  ++  IP   + ++      E  +CS+CL ++EE++  R++PKCGHSFH+ CI
Sbjct: 77  RDQALDQAVLDKIPIFVYSSKNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGHSFHVDCI 136

Query: 119 DEWLRKQSTCPVCRLPLQESF 139
           D W R +STCP+CR P+Q  F
Sbjct: 137 DTWFRSRSTCPLCRAPVQPPF 157

[Close]

BLAST of Moc07g22160 vs. ExPASy TrEMBL
Match: A0A6J1DPT3 (putative RING-H2 finger protein ATL69 OS=Momordica charantia OX=3673 GN=LOC111023094 PE=4 SV=1)

HSP 1 Score: 417.9 bits (1073), Expect = 2.4e-113
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0


Query: 1   MTGSGMNLVTTVIGFGMSATFIVFVCTRIICGRLRSSDSTTPNYEIESRLDLERQPESRR 60
           MTGSGMNLVTTVIGFGMSATFIVFVCTRIICGRLRSSDSTTPNYEIESRLDLERQPESRR
Sbjct: 1   MTGSGMNLVTTVIGFGMSATFIVFVCTRIICGRLRSSDSTTPNYEIESRLDLERQPESRR 60

Query: 61  SGLEPVLIAAIPTMKFNREAFSSVEDAQCSICLGDYEEKEVLRIMPKCGHSFHLSCIDEW 120
           SGLEPVLIAAIPTMKFNREAFSSVEDAQCSICLGDYEEKEVLRIMPKCGHSFHLSCIDEW
Sbjct: 61  SGLEPVLIAAIPTMKFNREAFSSVEDAQCSICLGDYEEKEVLRIMPKCGHSFHLSCIDEW 120

Query: 121 LRKQSTCPVCRLPLQESFVTKPVRPVTVSRDQSFDASEISTDHHSRHWLISDPSRSEGNT 180
           LRKQSTCPVCRLPLQESFVTKPVRPVTVSRDQSFDASEISTDHHSRHWLISDPSRSEGNT
Sbjct: 121 LRKQSTCPVCRLPLQESFVTKPVRPVTVSRDQSFDASEISTDHHSRHWLISDPSRSEGNT 180

Query: 181 SSQAWGLEPVPVPVNSSVQREMEMRQ 207
           SSQAWGLEPVPVPVNSSVQREMEMRQ
Sbjct: 181 SSQAWGLEPVPVPVNSSVQREMEMRQ 206

[Close]

BLAST of Moc07g22160 vs. ExPASy TrEMBL
Match: A0A0A0K9N8 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G074560 PE=4 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 2.3e-92
Identity = 170/206 (82.52%), Postives = 187/206 (90.78%), Query Frame = 0


Query: 1   MTGSGMNLVTTVIGFGMSATFIVFVCTRIICGRLRSSDSTTPNYEIESRLDLERQPESRR 60
           MTGSGMNL+TTVIGFGMSATFIVFVCTRIICGRLRS+ S TPNYEIESRLDLE+QPESR 
Sbjct: 1   MTGSGMNLITTVIGFGMSATFIVFVCTRIICGRLRSAQSNTPNYEIESRLDLEQQPESRA 60

Query: 61  SGLEPVLIAAIPTMKFNREAFSSVEDAQCSICLGDYEEKEVLRIMPKCGHSFHLSCIDEW 120
           SGLEPVLIAAIPTM F+REAFSS+EDAQCSICLG+YEEKEVLRIMPKCGHSFHL+CID W
Sbjct: 61  SGLEPVLIAAIPTMTFDREAFSSIEDAQCSICLGEYEEKEVLRIMPKCGHSFHLTCIDVW 120

Query: 121 LRKQSTCPVCRLPLQESFVTKPVRPVTVSRDQSFDASEISTDHHSRHWLISDPSRSEGNT 180
           LRKQSTCPVCRLPLQ+SF TKP RP+TVSRDQSFD SEISTDHHS+HWL+  P+RSEGNT
Sbjct: 121 LRKQSTCPVCRLPLQDSFRTKPARPMTVSRDQSFDGSEISTDHHSQHWLLPGPNRSEGNT 180

Query: 181 SSQAWGLEPVPVPVNSSVQREMEMRQ 207
           S+Q+   +  P+PVN + QREME  Q
Sbjct: 181 SNQS---QLQPIPVNPAAQREMETIQ 203

[Close]

BLAST of Moc07g22160 vs. ExPASy TrEMBL
Match: A0A5A7TEE5 (RING-H2 finger protein ATL5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G003170 PE=4 SV=1)

HSP 1 Score: 346.3 bits (887), Expect = 8.9e-92
Identity = 169/206 (82.04%), Postives = 186/206 (90.29%), Query Frame = 0


Query: 1   MTGSGMNLVTTVIGFGMSATFIVFVCTRIICGRLRSSDSTTPNYEIESRLDLERQPESRR 60
           MTGSGMNL+TTVIGFGMSATFIVFVCTRIICGRLRS+ S TPNYEIESRLDLE+QPESR 
Sbjct: 1   MTGSGMNLITTVIGFGMSATFIVFVCTRIICGRLRSAQSNTPNYEIESRLDLEQQPESRA 60

Query: 61  SGLEPVLIAAIPTMKFNREAFSSVEDAQCSICLGDYEEKEVLRIMPKCGHSFHLSCIDEW 120
           SGLEPVLIAAIPT KF++EAFSS EDAQCSICLG+YEEKEVLRIMPKCGHSFHL+CID W
Sbjct: 61  SGLEPVLIAAIPTTKFDQEAFSSAEDAQCSICLGEYEEKEVLRIMPKCGHSFHLTCIDVW 120

Query: 121 LRKQSTCPVCRLPLQESFVTKPVRPVTVSRDQSFDASEISTDHHSRHWLISDPSRSEGNT 180
           LRKQSTCP+CRLPLQ+SF TKP RP+TVSRDQSFD SEISTDHHS+HWL+  P+RSEGNT
Sbjct: 121 LRKQSTCPICRLPLQDSFRTKPARPMTVSRDQSFDGSEISTDHHSQHWLLPGPNRSEGNT 180

Query: 181 SSQAWGLEPVPVPVNSSVQREMEMRQ 207
           S+Q+   +  P+PVN S QREME  Q
Sbjct: 181 SNQS---QLQPIPVNPSAQREMETIQ 203

[Close]

BLAST of Moc07g22160 vs. ExPASy TrEMBL
Match: A0A1S3CBG3 (RING-H2 finger protein ATL5-like OS=Cucumis melo OX=3656 GN=LOC103499057 PE=4 SV=1)

HSP 1 Score: 346.3 bits (887), Expect = 8.9e-92
Identity = 169/206 (82.04%), Postives = 186/206 (90.29%), Query Frame = 0


Query: 1   MTGSGMNLVTTVIGFGMSATFIVFVCTRIICGRLRSSDSTTPNYEIESRLDLERQPESRR 60
           MTGSGMNL+TTVIGFGMSATFIVFVCTRIICGRLRS+ S TPNYEIESRLDLE+QPESR 
Sbjct: 1   MTGSGMNLITTVIGFGMSATFIVFVCTRIICGRLRSAQSNTPNYEIESRLDLEQQPESRA 60

Query: 61  SGLEPVLIAAIPTMKFNREAFSSVEDAQCSICLGDYEEKEVLRIMPKCGHSFHLSCIDEW 120
           SGLEPVLIAAIPT KF++EAFSS EDAQCSICLG+YEEKEVLRIMPKCGHSFHL+CID W
Sbjct: 61  SGLEPVLIAAIPTTKFDQEAFSSAEDAQCSICLGEYEEKEVLRIMPKCGHSFHLTCIDVW 120

Query: 121 LRKQSTCPVCRLPLQESFVTKPVRPVTVSRDQSFDASEISTDHHSRHWLISDPSRSEGNT 180
           LRKQSTCP+CRLPLQ+SF TKP RP+TVSRDQSFD SEISTDHHS+HWL+  P+RSEGNT
Sbjct: 121 LRKQSTCPICRLPLQDSFRTKPARPMTVSRDQSFDGSEISTDHHSQHWLLPGPNRSEGNT 180

Query: 181 SSQAWGLEPVPVPVNSSVQREMEMRQ 207
           S+Q+   +  P+PVN S QREME  Q
Sbjct: 181 SNQS---QLQPIPVNPSAQREMETIQ 203

[Close]

BLAST of Moc07g22160 vs. ExPASy TrEMBL
Match: A0A5D3DMH5 (RING-H2 finger protein ATL5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G00110 PE=4 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 1.2e-88
Identity = 168/214 (78.50%), Postives = 185/214 (86.45%), Query Frame = 0


Query: 1   MTGSGMNLVTTVIGFGMSATFIVFVCTRIICGRLRSSDSTTPNYEIESRLDLERQ----- 60
           MTGSGMNL+TTVIGFGMSATFIVFVCTRIICGRLRS+ S TPNYEIESRLDLE+Q     
Sbjct: 1   MTGSGMNLITTVIGFGMSATFIVFVCTRIICGRLRSAQSNTPNYEIESRLDLEQQYSGVA 60

Query: 61  ---PESRRSGLEPVLIAAIPTMKFNREAFSSVEDAQCSICLGDYEEKEVLRIMPKCGHSF 120
               ESR SGLEPVLIAAIPT KF++EAFSS EDAQCSICLG+YEEKEVLRIMPKCGHSF
Sbjct: 61  KDWKESRASGLEPVLIAAIPTTKFDQEAFSSAEDAQCSICLGEYEEKEVLRIMPKCGHSF 120

Query: 121 HLSCIDEWLRKQSTCPVCRLPLQESFVTKPVRPVTVSRDQSFDASEISTDHHSRHWLISD 180
           HL+CID WLRKQSTCP+CRLPLQ+SF TKP RP+TVSRDQSFD SEISTDHHS+HWL+  
Sbjct: 121 HLTCIDVWLRKQSTCPICRLPLQDSFRTKPARPMTVSRDQSFDGSEISTDHHSQHWLLPG 180

Query: 181 PSRSEGNTSSQAWGLEPVPVPVNSSVQREMEMRQ 207
           P+RSEGNTS+Q+   +  P+PVN S QREME  Q
Sbjct: 181 PNRSEGNTSNQS---QLQPIPVNPSAQREMETIQ 211

[Close]

BLAST of Moc07g22160 vs. TAIR 10
Match: AT4G33565.1 (RING/U-box superfamily protein )

HSP 1 Score: 89.7 bits (221), Expect = 2.9e-18
Identity = 50/138 (36.23%), Postives = 73/138 (52.90%), Query Frame = 0


Query: 59  RRSGLEPVLIAAIPTMKFNREAFSSVEDAQCSICLGDYEEKEVLRIMPKCGHSFHLSCID 118
           R  GL P +I++I   +++++    VE   CS+CL ++EE+E LR++PKC H+FHL CID
Sbjct: 188 RTIGLNPTVISSIKVCQYSKKD-GVVEGTDCSVCLSEFEEEETLRLLPKCKHAFHLYCID 247

Query: 119 EWLRKQSTCPVCRLPLQESFVTKPVRPVTVSRDQSFDASEIS----------TD---HHS 178
            WLR  + CP+CR P+ E+         T+  D S    EIS          TD      
Sbjct: 248 TWLRSHTNCPLCRAPIVEA--------NTMIDDHSEGLEEISVMIPEENGDDTDEEIEEE 307

Query: 179 RHWLISDPSRSEGNTSSQ 184
           R   +S+ SR  G +  Q
Sbjct: 308 RDGFVSNISRDHGESQQQ 316

[Close]

BLAST of Moc07g22160 vs. TAIR 10
Match: AT3G62690.1 (AtL5 )

HSP 1 Score: 88.2 bits (217), Expect = 8.4e-18
Identity = 47/150 (31.33%), Postives = 78/150 (52.00%), Query Frame = 0


Query: 55  QPESRRSGLEPVLIAAIPTMKFNREAFSSVEDAQCSICLGDYEEKEVLRIMPKCGHSFHL 114
           Q  S  S L+P ++  IP   ++ +   S  + +CS+CL ++EE +  R++PKCGH FH+
Sbjct: 80  QSSSSLSPLDPTVLEKIPIFVYSVKTHESPLE-ECSVCLSEFEEDDEGRVLPKCGHVFHV 139

Query: 115 SCIDEWLRKQSTCPVCRLPLQESFVTKPVRPVTVSRDQSFDASEISTDHHSRHWLISDPS 174
            CID W R +S+CP+CR P+Q      P +PVT     +     +     +     S   
Sbjct: 140 DCIDTWFRSRSSCPLCRAPVQ------PAQPVTEPEPVAAVFPSVKPIEDTEAGSSSSSD 199

Query: 175 RSEGNTSSQAWGLEPVPVPVNSSVQREMEM 205
            SE +T S + G  PV  P+ +  +  +++
Sbjct: 200 ESESSTPSSSSG-SPVRFPMEACEREPIDL 221

[Close]

BLAST of Moc07g22160 vs. TAIR 10
Match: AT3G14320.1 (Zinc finger, C3HC4 type (RING finger) family protein )

HSP 1 Score: 85.9 bits (211), Expect = 4.2e-17
Identity = 55/171 (32.16%), Postives = 86/171 (50.29%), Query Frame = 0


Query: 5   GMNLVTTVIGFGMSATFIVFVCTRIICGRLRSSDSTTPNYEIESRLDLERQPESRRSGLE 64
           G+N+V     FG+SA   V V   I C      D    N   +  + +  +    R G++
Sbjct: 13  GINIVFAFFFFGISA---VVVSCIIKCYNTHDDDHDHDNNN-DGHVSITIK---ERVGIK 72

Query: 65  PVLIAAIPTMKFNREAFSSVEDAQCSICLGDYEEKEVLRIMPKCGHSFHLSCIDEWLRKQ 124
           P ++ +IP + FN + F  V   +C +CL +  + +  R++P C H FH+ CID WL+  
Sbjct: 73  PYVLRSIPIVDFNTKDFKYV--LECVVCLSELADGDKARVLPSCDHWFHVECIDSWLQSN 132

Query: 125 STCPVC--RLPLQESFVTKPVRPVTVSRDQSFDASEISTDHHSRHWLISDP 174
           STCP+C  R+ L++S      RP    RD+SF+ +   T  H  H   +DP
Sbjct: 133 STCPICRKRVCLKQS----RTRPELGGRDKSFNQNHDQTSEH--HEFSTDP 168

[Close]

BLAST of Moc07g22160 vs. TAIR 10
Match: AT3G11110.1 (RING/U-box superfamily protein )

HSP 1 Score: 85.9 bits (211), Expect = 4.2e-17
Identity = 31/83 (37.35%), Postives = 52/83 (62.65%), Query Frame = 0


Query: 53  ERQPESRRSGLEPVLIAAIPTMKFNREAFSSVEDAQCSICLGDYEEKEVLRIMPKCGHSF 112
           +R    R  GL+P  I ++P +   RE     E+ +C ICLG +EE E ++++P C H +
Sbjct: 71  DRLTRCRSGGLDPAEIRSLPVVLCRRERAEEEEEKECCICLGGFEEGEKMKVLPPCSHCY 130

Query: 113 HLSCIDEWLRKQSTCPVCRLPLQ 136
           H  C+D WL+ +S+CP+CR+ ++
Sbjct: 131 HCECVDRWLKTESSCPLCRVSIR 153

[Close]

BLAST of Moc07g22160 vs. TAIR 10
Match: AT2G47560.1 (RING/U-box superfamily protein )

HSP 1 Score: 84.7 bits (208), Expect = 9.3e-17
Identity = 34/81 (41.98%), Postives = 52/81 (64.20%), Query Frame = 0


Query: 59  RRSGLEPVLIAAIPTMKF-NREAFSSVEDAQCSICLGDYEEKEVLRIMPKCGHSFHLSCI 118
           R   L+  ++  IP   + ++      E  +CS+CL ++EE++  R++PKCGHSFH+ CI
Sbjct: 77  RDQALDQAVLDKIPIFVYSSKNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGHSFHVDCI 136

Query: 119 DEWLRKQSTCPVCRLPLQESF 139
           D W R +STCP+CR P+Q  F
Sbjct: 137 DTWFRSRSTCPLCRAPVQPPF 157

The following BLAST results are available for this feature:

BLAST of Moc07g22160 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022156138.1	5.0e-113	100.00	putative RING-H2 finger protein ATL69 [Momordica charantia]	[more]
XP_004153610.1	4.8e-92	82.52	RING-H2 finger protein ATL5 [Cucumis sativus] >KGN46203.1 hypothetical protein C...	[more]
XP_008460164.1	1.8e-91	82.04	PREDICTED: RING-H2 finger protein ATL5-like [Cucumis melo] >KAA0040031.1 RING-H2...	[more]
XP_038876418.1	1.8e-91	82.52	RING-H2 finger protein ATL72-like [Benincasa hispida]	[more]
TYK24470.1	2.5e-88	78.50	RING-H2 finger protein ATL5-like [Cucumis melo var. makuwa]	[more]

BLAST of Moc07g22160 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LZJ6	1.2e-16	31.33	RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1	[more]
Q9LUL6	5.9e-16	32.16	Putative RING-H2 finger protein ATL61 OS=Arabidopsis thaliana OX=3702 GN=ATL61 P...	[more]
Q9SRM0	5.9e-16	37.35	RING-H2 finger protein ATL66 OS=Arabidopsis thaliana OX=3702 GN=ATL66 PE=2 SV=1	[more]
Q5XF85	1.3e-15	32.81	E3 ubiquitin-protein ligase ATL42 OS=Arabidopsis thaliana OX=3702 GN=ATL42 PE=1 ...	[more]
O22255	1.3e-15	41.98	RING-H2 finger protein ATL64 OS=Arabidopsis thaliana OX=3702 GN=ATL64 PE=2 SV=1	[more]

BLAST of Moc07g22160 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DPT3	2.4e-113	100.00	putative RING-H2 finger protein ATL69 OS=Momordica charantia OX=3673 GN=LOC11102...	[more]
A0A0A0K9N8	2.3e-92	82.52	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G074560 P...	[more]
A0A5A7TEE5	8.9e-92	82.04	RING-H2 finger protein ATL5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27...	[more]
A0A1S3CBG3	8.9e-92	82.04	RING-H2 finger protein ATL5-like OS=Cucumis melo OX=3656 GN=LOC103499057 PE=4 SV...	[more]
A0A5D3DMH5	1.2e-88	78.50	RING-H2 finger protein ATL5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]

BLAST of Moc07g22160 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G33565.1	2.9e-18	36.23	RING/U-box superfamily protein	[more]
AT3G62690.1	8.4e-18	31.33	AtL5	[more]
AT3G14320.1	4.2e-17	32.16	Zinc finger, C3HC4 type (RING finger) family protein	[more]
AT3G11110.1	4.2e-17	37.35	RING/U-box superfamily protein	[more]
AT2G47560.1	9.3e-17	41.98	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 89..130 e-value: 3.7E-9 score: 46.4
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 88..131 e-value: 3.6E-15 score: 56.0
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 89..131 score: 13.374458
None	No IPR available	SMART	SM01197	FANCL_C_2	coord: 85..139 e-value: 0.0022 score: 3.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 165..206
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 172..186
None	No IPR available	PANTHER	PTHR47035	OS11G0150450 PROTEIN	coord: 1..191
None	No IPR available	PANTHER	PTHR47035:SF4	OS02G0676500 PROTEIN	coord: 1..191
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 88..131 e-value: 5.52529E-18 score: 71.9493
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 79..142
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 65..139 e-value: 4.1E-23 score: 82.4

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc07g22160.1	Moc07g22160.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane