Moc07g20190 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc07g20190
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionCCHC-type domain-containing protein
Locationchr7: 14561319 .. 14562059 (-)
RNA-Seq ExpressionMoc07g20190
SyntenyMoc07g20190
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGACAACGGAGTTGTTGGACGAGTGGAAGAAATTCAGATTGACATCTATAGAGGAGGAAGTGACTGTGGATGTGGACCAAGGGGCGATACAGAAAGCCGAACGACGACTAGAGACATGTTTAGATGGAAAATTACTTCTACAAATGACTATTTCTTGTGAAGCTCTGAAGAAAGTCTTCCAGCCTTTGTGGAAAGCAGGCAATGGTTTTGCAGTTGAGGGGATTGGCAGAAACATGTTTTTATTTCGTTTTGACTATGAAAAAGAGTGCGATAGAGTTTTTAAGATGGGACCATGGTCTTTCGACAAAGCTTGATTGATCCTTCAAAATCCAGTGAAGATGGTCAAGTTATCCGAACTGGAGTTTAAGTATGTGTCCTTTTGGACACACTTCTATGATCTCCCGCTGTCGTGCATGACTAAAGCGATGGCAATGGGGCTGGAAAATGATGTGGGCGTTTGTGAGGACGTGGATTGTGATGTTGATGATTTGTGTTGGGGGGAAAGTCTCAGGGTGAAAATCAAGTACGACATTACCATACCAATCCAGAGAGGGATAAAAATCAACATTGATGTTCCGATGGGAGGCTGTTGGATTCCCATGACCTATGAAAGGCTGCCTGAGTTTAGTTATCTCTGTGGATTAATTGGGCATGCAGGGAAAGAGTGCTCTGTTGGTTTAGATAGTTTGGAGAGGAAGAAAGGGTTTGTGGCTCCTTATGGAGCTTGTCAGGGTTGA

mRNA sequence

ATGGCGACAACGGAGTTGTTGGACGAGTGGAAGAAATTCAGATTGACATCTATAGAGGAGGAAGTGACTGTGGATGTGGACCAAGGGGCGATACAGAAAGCCGAACGACGACTAGAGACATGTTTAGATGGAAAATTACTTCTACAAATGACTATTTCTTGTGAAGCTCTGAAGAAAGTCTTCCAGCCTTTGTGGAAAGCAGGCAATGTGAAGATGGTCAAGTTATCCGAACTGGAGTTTAAGTATGTGTCCTTTTGGACACACTTCTATGATCTCCCGCTGTCGTGCATGACTAAAGCGATGGCAATGGGGCTGGAAAATGATGTGGGCGTTTGTGAGGACGTGGATTGTGATGTTGATGATTTGTGTTGGGGGGAAAGTCTCAGGGTGAAAATCAAGTACGACATTACCATACCAATCCAGAGAGGGATAAAAATCAACATTGATGTTCCGATGGGAGGCTGTTGGATTCCCATGACCTATGAAAGGCTGCCTGAGTTTAGTTATCTCTGTGGATTAATTGGGCATGCAGGGAAAGAGTGCTCTGTTGGTTTAGATAGTTTGGAGAGGAAGAAAGGGTTTGTGGCTCCTTATGGAGCTTGTCAGGGTTGA

Coding sequence (CDS)

ATGGCGACAACGGAGTTGTTGGACGAGTGGAAGAAATTCAGATTGACATCTATAGAGGAGGAAGTGACTGTGGATGTGGACCAAGGGGCGATACAGAAAGCCGAACGACGACTAGAGACATGTTTAGATGGAAAATTACTTCTACAAATGACTATTTCTTGTGAAGCTCTGAAGAAAGTCTTCCAGCCTTTGTGGAAAGCAGGCAATGTGAAGATGGTCAAGTTATCCGAACTGGAGTTTAAGTATGTGTCCTTTTGGACACACTTCTATGATCTCCCGCTGTCGTGCATGACTAAAGCGATGGCAATGGGGCTGGAAAATGATGTGGGCGTTTGTGAGGACGTGGATTGTGATGTTGATGATTTGTGTTGGGGGGAAAGTCTCAGGGTGAAAATCAAGTACGACATTACCATACCAATCCAGAGAGGGATAAAAATCAACATTGATGTTCCGATGGGAGGCTGTTGGATTCCCATGACCTATGAAAGGCTGCCTGAGTTTAGTTATCTCTGTGGATTAATTGGGCATGCAGGGAAAGAGTGCTCTGTTGGTTTAGATAGTTTGGAGAGGAAGAAAGGGTTTGTGGCTCCTTATGGAGCTTGTCAGGGTTGA

Protein sequence

MATTELLDEWKKFRLTSIEEEVTVDVDQGAIQKAERRLETCLDGKLLLQMTISCEALKKVFQPLWKAGNVKMVKLSELEFKYVSFWTHFYDLPLSCMTKAMAMGLENDVGVCEDVDCDVDDLCWGESLRVKIKYDITIPIQRGIKINIDVPMGGCWIPMTYERLPEFSYLCGLIGHAGKECSVGLDSLERKKGFVAPYGACQG
Homology
BLAST of Moc07g20190 vs. NCBI nr
Match: XP_022156185.1 (uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncharacterized protein LOC111023135 [Momordica charantia])

HSP 1 Score: 177.9 bits (450), Expect = 8.5e-41
Identity = 92/237 (38.82%), Postives = 127/237 (53.59%), Query Frame = 0

Query: 6   LLDEWKKFRLTSIEEEVTVDVDQGAIQKAERRLETCLDGKLLLQMTISCEALKKVFQPLW 65
           LL +W+KF+LTS E+E+ +DVD  A++ AE+ L   L GKLL +  IS + L +V    W
Sbjct: 6   LLADWQKFKLTSEEDEIAMDVDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRVLLLAW 65

Query: 66  KAGNVKMVK-------------------------------------------LSELEFKY 125
           K  +   V+                                           +SELEF  
Sbjct: 66  KVEHQLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISELEFNR 125

Query: 126 VSFWTHFYDLPLSCMTKAMAMGLENDVGVCEDVDCDVDDLCWGESLRVKIKYDITIPIQR 185
           V+FW H +DLP+S + K MA+ L N +G   DVDC+     WG SLR+++  DIT P++R
Sbjct: 126 VAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRIRVLIDITKPLRR 185

Query: 186 GIKINIDVPMGGCWIPMTYERLPEFSYLCGLIGHAGKECSVGLDSLERKKGFVAPYG 200
           GIKINID PMGGCWIP+ YERLP+F Y CG+IGH+  +C     + +      + YG
Sbjct: 186 GIKINIDGPMGGCWIPIQYERLPDFCYFCGVIGHSSHDCDARYLAAQDDSRATSEYG 242

BLAST of Moc07g20190 vs. NCBI nr
Match: XP_022132681.1 (uncharacterized protein LOC111005481 [Momordica charantia])

HSP 1 Score: 177.6 bits (449), Expect = 1.1e-40
Identity = 86/226 (38.05%), Postives = 124/226 (54.87%), Query Frame = 0

Query: 1   MATTELLDEWKKFRLTSIEEEVTVDVDQGAIQKAERRLETCLDGKLLLQMTISCEALKKV 60
           MA + LL+EWK F+LTS E+++ VD+D  A++   + LE  L  KLL + +ISC  LK  
Sbjct: 1   MAASNLLEEWKNFKLTSEEDKIAVDIDSSALEGTGKCLELSLICKLLSKRSISCTVLKNT 60

Query: 61  FQPLWKA--------------------------------------------GNVKMVKLS 120
            +  WK                                               V + K  
Sbjct: 61  LKIAWKLDCKAFSVDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPL 120

Query: 121 ELEFKYVSFWTHFYDLPLSCMTKAMAMGLENDVGVCEDVDCDVDDLCWGESLRVKIKYDI 180
           +++F+ VS W HF+DL L+CM K MA  L N +G+ EDV+ + ++ CWG  LRV++++D+
Sbjct: 121 DMDFRNVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVESNANNFCWGSCLRVRVRFDV 180

Query: 181 TIPIQRGIKINIDVPMGGCWIPMTYERLPEFSYLCGLIGHAGKECS 183
             P+ RGIK+N+D PMGGCWIP+ YERLP+F Y CG + H  K+CS
Sbjct: 181 MKPLHRGIKLNLDGPMGGCWIPIQYERLPDFRYHCGRLDHILKDCS 226

BLAST of Moc07g20190 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia])

HSP 1 Score: 160.6 bits (405), Expect = 1.4e-35
Identity = 84/217 (38.71%), Postives = 115/217 (53.00%), Query Frame = 0

Query: 1   MATTELLDEWKKFRLTSIEEEVTVDVDQGAIQKAERRLETCLDGKLLLQMTISCEALKKV 60
           MAT +LL+EWK F+LTS EEE  +DVD  A      RLE  L GKL ++  I+C  +K  
Sbjct: 1   MATFDLLEEWKNFKLTSEEEETAIDVDASAPATTGSRLEQILVGKLFIKRPITCPVMKNT 60

Query: 61  FQPLWKAGN--------------------------------------------VKMVKLS 120
            +  WK  N                                            V ++  S
Sbjct: 61  MRTAWKLENNAFEVQSLGYNLFLFSFARALDRNKIYKSGPWTFDRTLVLINKPVALIPPS 120

Query: 121 ELEFKYVSFWTHFYDLPLSCMTKAMAMGLENDVGVCEDVDCDVDDLCWGESLRVKIKYDI 174
           EL+F  +  W  F+DLPL C+T+ MA+ L N +G  E+ DCD  +  WG +LRV++  DI
Sbjct: 121 ELDFTKLPIWVRFFDLPLGCITRDMAIRLGNALGGFEEADCDDLNPDWGSNLRVRVMLDI 180

BLAST of Moc07g20190 vs. NCBI nr
Match: XP_023892984.1 (uncharacterized protein LOC112004978 [Quercus suber])

HSP 1 Score: 108.6 bits (270), Expect = 6.4e-20
Identity = 71/241 (29.46%), Postives = 110/241 (45.64%), Query Frame = 0

Query: 5   ELLDEWKKFRLTSIEEEVTVDVDQGAIQKAERRLETCLDGKLLLQMTISCEALKKVFQPL 64
           EL + WKK   T  EE+  V++D G+   A +  + C+  K+L Q +I+ +AL+K  + L
Sbjct: 4   ELEELWKKLTFTE-EEDAGVELDSGSTSAARKLGKYCVVMKILSQRSINVDALRKNLRML 63

Query: 65  WKAG-NVKMVKL------------------------------------------SELEFK 124
           WK    V++ +L                                           E+E K
Sbjct: 64  WKPNKGVQIAELEEDLFLVEFGDEKDKKKVLDMCPWSYEKQLVLLQEFEGKLTPKEIEVK 123

Query: 125 YVSFWTHFYDLPLSCMTKAMAMGLENDVGVCEDVDCDVDDLCWGESLRVKIKYDITIPIQ 184
           +  FW   Y+LPL+  T+     + + +G   DVD     + WG+ LRV++  DIT  + 
Sbjct: 124 WAPFWVQIYNLPLNSRTRESGWAIGSCLGSVLDVDVSDSGVQWGKCLRVRVSIDITKRLV 183

Query: 185 RGIKINIDVPMGG--CWIPMTYERLPEFSYLCGLIGHAGKECSVGLDSLERKKGFVAPYG 201
           RG +I  +   GG   W+   YERLP F Y CGL+ H+ ++CS G  S ++       YG
Sbjct: 184 RGKRITAE---GGEPKWVNFKYERLPNFCYRCGLLNHSLRDCSEGQASRDKDGANHLQYG 240

BLAST of Moc07g20190 vs. NCBI nr
Match: XP_042964619.1 (uncharacterized protein LOC122298838 [Carya illinoinensis])

HSP 1 Score: 107.5 bits (267), Expect = 1.4e-19
Identity = 60/222 (27.03%), Postives = 103/222 (46.40%), Query Frame = 0

Query: 5   ELLDEWKKFRLTSIEEEVTVDVDQGAIQKAERRLETCLDGKLLLQMTISCEALKKVFQPL 64
           E L+E  +    S +E+  + V++G ++++++R E CL   LL +   + EA K+  + +
Sbjct: 3   ETLEELCQRLSLSEQEKEEIIVNEGLLEESKQRGEHCLLVSLLTEKPYNREAFKQTLKKI 62

Query: 65  W-------------------------------------------KAGNVKMVKLSELEFK 124
           W                                                + V+ + ++  
Sbjct: 63  WHPVKKIWVKDLGSKPFLVEFEDQKEKARVQCEGPWSFDRNLILMQNYTREVQATRVQIS 122

Query: 125 YVSFWTHFYDLPLSCMTKAMAMGLENDVGVCEDVDCDVDDLCWGESLRVKIKYDITIPIQ 184
             +FW   YDLPL  M + +   + N +GV E +D + D++ WGE +R+ I  D+T P+ 
Sbjct: 123 TAAFWIRLYDLPLGAMNEKVVSKIGNSIGVVEKIDVEKDEVAWGEFIRIGILLDVTKPLL 182

BLAST of Moc07g20190 vs. ExPASy TrEMBL
Match: A0A6J1DU55 (uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023135 PE=4 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 4.1e-41
Identity = 92/237 (38.82%), Postives = 127/237 (53.59%), Query Frame = 0

Query: 6   LLDEWKKFRLTSIEEEVTVDVDQGAIQKAERRLETCLDGKLLLQMTISCEALKKVFQPLW 65
           LL +W+KF+LTS E+E+ +DVD  A++ AE+ L   L GKLL +  IS + L +V    W
Sbjct: 6   LLADWQKFKLTSEEDEIAMDVDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRVLLLAW 65

Query: 66  KAGNVKMVK-------------------------------------------LSELEFKY 125
           K  +   V+                                           +SELEF  
Sbjct: 66  KVEHQLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISELEFNR 125

Query: 126 VSFWTHFYDLPLSCMTKAMAMGLENDVGVCEDVDCDVDDLCWGESLRVKIKYDITIPIQR 185
           V+FW H +DLP+S + K MA+ L N +G   DVDC+     WG SLR+++  DIT P++R
Sbjct: 126 VAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRIRVLIDITKPLRR 185

Query: 186 GIKINIDVPMGGCWIPMTYERLPEFSYLCGLIGHAGKECSVGLDSLERKKGFVAPYG 200
           GIKINID PMGGCWIP+ YERLP+F Y CG+IGH+  +C     + +      + YG
Sbjct: 186 GIKINIDGPMGGCWIPIQYERLPDFCYFCGVIGHSSHDCDARYLAAQDDSRATSEYG 242

BLAST of Moc07g20190 vs. ExPASy TrEMBL
Match: A0A6J1BSZ1 (uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005481 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 5.4e-41
Identity = 86/226 (38.05%), Postives = 124/226 (54.87%), Query Frame = 0

Query: 1   MATTELLDEWKKFRLTSIEEEVTVDVDQGAIQKAERRLETCLDGKLLLQMTISCEALKKV 60
           MA + LL+EWK F+LTS E+++ VD+D  A++   + LE  L  KLL + +ISC  LK  
Sbjct: 1   MAASNLLEEWKNFKLTSEEDKIAVDIDSSALEGTGKCLELSLICKLLSKRSISCTVLKNT 60

Query: 61  FQPLWKA--------------------------------------------GNVKMVKLS 120
            +  WK                                               V + K  
Sbjct: 61  LKIAWKLDCKAFSVDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPL 120

Query: 121 ELEFKYVSFWTHFYDLPLSCMTKAMAMGLENDVGVCEDVDCDVDDLCWGESLRVKIKYDI 180
           +++F+ VS W HF+DL L+CM K MA  L N +G+ EDV+ + ++ CWG  LRV++++D+
Sbjct: 121 DMDFRNVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVESNANNFCWGSCLRVRVRFDV 180

Query: 181 TIPIQRGIKINIDVPMGGCWIPMTYERLPEFSYLCGLIGHAGKECS 183
             P+ RGIK+N+D PMGGCWIP+ YERLP+F Y CG + H  K+CS
Sbjct: 181 MKPLHRGIKLNLDGPMGGCWIPIQYERLPDFRYHCGRLDHILKDCS 226

BLAST of Moc07g20190 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 6.8e-36
Identity = 84/217 (38.71%), Postives = 115/217 (53.00%), Query Frame = 0

Query: 1   MATTELLDEWKKFRLTSIEEEVTVDVDQGAIQKAERRLETCLDGKLLLQMTISCEALKKV 60
           MAT +LL+EWK F+LTS EEE  +DVD  A      RLE  L GKL ++  I+C  +K  
Sbjct: 1   MATFDLLEEWKNFKLTSEEEETAIDVDASAPATTGSRLEQILVGKLFIKRPITCPVMKNT 60

Query: 61  FQPLWKAGN--------------------------------------------VKMVKLS 120
            +  WK  N                                            V ++  S
Sbjct: 61  MRTAWKLENNAFEVQSLGYNLFLFSFARALDRNKIYKSGPWTFDRTLVLINKPVALIPPS 120

Query: 121 ELEFKYVSFWTHFYDLPLSCMTKAMAMGLENDVGVCEDVDCDVDDLCWGESLRVKIKYDI 174
           EL+F  +  W  F+DLPL C+T+ MA+ L N +G  E+ DCD  +  WG +LRV++  DI
Sbjct: 121 ELDFTKLPIWVRFFDLPLGCITRDMAIRLGNALGGFEEADCDDLNPDWGSNLRVRVMLDI 180

BLAST of Moc07g20190 vs. ExPASy TrEMBL
Match: A0A5C7IXM0 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_002467 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 4.4e-19
Identity = 61/243 (25.10%), Postives = 106/243 (43.62%), Query Frame = 0

Query: 1   MATTELLDEWKKFRLTSIEEEVTVDVDQGAIQKAERRLETCLDGKLLLQMTISCEALKKV 60
           M T EL   W+   +   + E+   V +G  ++    ++ CL GK+L +  ++ EA K V
Sbjct: 1   MGTKELARLWENLSIKDEDSEIH-QVSEGLGKEGVEDVDHCLVGKVLSRKRVNREAFKSV 60

Query: 61  FQPLWKAGNVKMVK-------------------------------------------LSE 120
            + LW    +  ++                                           +S+
Sbjct: 61  IEQLWSPFGIVEIEVVGENIFMFYFSNPEVRNQIWRRGPWHFDKSLIVLVQLEGTGDISQ 120

Query: 121 LEFKYVSFWTHFYDLPLSCMTKAMAMGLENDVGVCEDVDCDVDDLCWGESLRVKIKYDIT 180
           L F    FW   +D+P+ CM K MA  L   +G   ++  +  + CWG+ LRVK+  DI+
Sbjct: 121 LRFDKAEFWVQIHDIPIICMNKRMAKWLAEQIGRVIEIPMESRE-CWGKFLRVKVLIDIS 180

Query: 181 IPIQRGIKINIDVPMGGCWIPMTYERLPEFSYLCGLIGHAGKECSVGLDSLERKKGFVAP 201
            P++R +++ +D       + + YERL EF Y CG +GH   +C+ G    +   G +A 
Sbjct: 181 RPLKRWLRLKLDKSDNVVVVGLKYERLSEFCYACGRVGHGVNDCTDGDAKKDALDGSMAK 240

BLAST of Moc07g20190 vs. ExPASy TrEMBL
Match: K3ZNG2 (CCHC-type domain-containing protein OS=Setaria italica OX=4555 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 4.4e-19
Identity = 47/116 (40.52%), Postives = 69/116 (59.48%), Query Frame = 0

Query: 75  LSELEFKYVSFWTHFYDLPLSCMTKAMAMGLENDVGVCEDVDCDVDDLCWGESLRVKIKY 134
           L E+ F ++  W     LP+  M KA A  + ++ G   +VD + DDL  G  LRVK++ 
Sbjct: 114 LDEIIFSFIPIWIRVARLPMGLMNKATAEVIGDEFGKFLEVDFESDDLAAGRVLRVKVRL 173

Query: 135 DITIPIQRGIKINIDVPMGGCWIPMTYERLPEFSYLCGLIGHAGKECSVGLDSLER 191
           DI +P++RGI +++   +G  W P+ YE LPEF Y+CG+IGH  K C+  L   ER
Sbjct: 174 DIRLPLRRGITVDLGEGVGDRWCPVQYEFLPEFCYVCGIIGHVDKTCTKKLGKEER 229

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022156185.18.5e-4138.82uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncha... [more]
XP_022132681.11.1e-4038.05uncharacterized protein LOC111005481 [Momordica charantia][more]
XP_022158377.11.4e-3538.71uncharacterized protein LOC111024874 [Momordica charantia][more]
XP_023892984.16.4e-2029.46uncharacterized protein LOC112004978 [Quercus suber][more]
XP_042964619.11.4e-1927.03uncharacterized protein LOC122298838 [Carya illinoinensis][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DU554.1e-4138.82uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A6J1BSZ15.4e-4138.05uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005... [more]
A0A6J1DX306.8e-3638.71uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A5C7IXM04.4e-1925.10CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_00246... [more]
K3ZNG24.4e-1940.52CCHC-type domain-containing protein OS=Setaria italica OX=4555 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025836Zinc knuckle CX2CX4HX4CPFAMPF14392zf-CCHC_4coord: 135..182
e-value: 1.7E-8
score: 34.0

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc07g20190.1Moc07g20190.1mRNA