Moc07g11430 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc07g11430
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Gag/pol protein
Location	chr7: 8842035 .. 8844922 (+)
RNA-Seq Expression	Moc07g11430
Synteny	Moc07g11430

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGCTATGCAGCAATGCCATGGCGCTGCGGGGACAGCACACAGCGCCATGGCACCGTGTCTTAGTGCCACGGCGCTACTGCTGCGGCTTTTTTGATGCAGCAGCGCCGTGGCGCTGCCCTTAGGCGCCGAGGTGCTGTCCCGGGTGTTTTTCAACGTGTTTCCGTGGCTTCGGTTCGCGGTTCGAGGATGGTTGCGGTCGTTTTCTTAATTTTTTGTATTATTTTGCTTTCTTAGGGTGCCAAAAACCGATCCAACTTTGCTATTTAATCATTTTATGCATTATGAATGTGTATTTTAATTAAAAGCATATTGCATATTGTATGCCATATAGTTTCAAAATCCGATTATAGGTTACATGCATAATATTTATGTTTGATATATAGTATGTATGTATGATCATGCATCATATAGTTATAATGTTATAATGTATGAATACATGTTTATTTTCATGATTAATATAAGTGTTGTATTAATTAGATGAAAATAAAGTTGCATTGAACATGACATTACTTTAGTTAATATAATTGTTATATTAATGTATGCTTACAATGCATGATTATAGTCTTAATTTCTTAAATTTTATAAGAATTATAAAATTTGGTAGATAGAAATTAAAATCTATAATAAACCTTTAAAGTTAATAAGACCTTAGGTTATATCTTCTAATATGATTAGGGATAGTCTTTTATTTTGTTTTAACTAGGTTTAAAATGAAATGATAAAAGACTAAATATAAAATATTGCCTATAAGGGAACCTTGTCTAAGGAAGGTTCTGTCTAGGTTAAGGTATTTAAGTTGACCGTAAGGGAACACCTCTACCTGGGAACCGACTGGGGATTGAATTAGTCAATATTTTATATTCATGCAATAATGTCCTTAGTTTATTAAATCATTTAATAAACTAAAACATTAATGTACAACTACCAATATAATAGTTATATTGGGCCGACTAAAAATTCACTTAGTTAATTTCACTTAGCCAAAATTTATCAAAGTAATATATCCTAGCTTTAGAATACTAAGTGGGAGCAAAAAAGAATATGTAATGTACTGCGTATATATTTGATATACAAAGTATATATAACATACTTTTCTCTCTCTCTCACGTTCTCCTTTATAGTCACACTGTGAGTCTCATGCTTGTCCTCGTGTCACCCTGGGCGCGGTCTCCCTACGAAAGGTGTTTGCATGGTTCAATATTGAGGTGAATGGAGATAGTATTCATAGTAAGTGGGAGAAGGACGTATGACAACACATCATGCGGTCTCAGCGATTGGTTTGCACCGTGAGGTTTCATACATGACCTGCGTGTCATCCTGGAGCGACCATCCCTACGGAGGGTTCATTGTATGGAATCAAAACCAAAGCAAACTCCAGGCAAAGGCCCCCCGAGCCCTAAGGGATCTTAGAGGGGCACCCAATCAAGGCCGCCACCCTCGCCCTTTAGAGATAGGGGCGCAACAAAAAGTCTTCAAAAAAAGGCGCCGGAGGCCTCAAACTCATCCGGAGTTAGAGAATGAAAAAAAAAAGCTTTCTCAACAAGAATGCATCAACAAAACGGCCCTTCCATATAGATCGTCAGAAATGGATAAGGGTCTCTTAGGTTTTACTCCAATATTTTCCTTCCCTATGACGGGATTATTGGGGTGGACCTCTGAGGTTTGAAAATGTAGGCACACTTACGGGGAGTTGTTAAGTTAGTTAGCAATTCCCTGAGCAAATGAACGATGACTAAAGATTATAAGAATAAGAGTTATTCTAGTATAAAATTTAGTTGAGAACGTCTCAATTCAGTGAAGGAGTAACTGTCTGCCCTACGGTGGCTCTTACTCTAAATCACTGAAGCGTCGTTGCAAAACAATTTTGTTAAGGTGCTTAATTACTTTTGCTAAAATTTGATTGGGTTTAAAGGCTAATGCATGAAACTAATATATGTTTGTTTTTACTTTCAACATGTCTACTTCTATTATTGCACTAATAGCCACGAAAAAACTTAACGGCGAGAATTACAAACAATAGAAATCGAATCTAAACAATATACTCGTGATATATGATCTTAGGTTCGTCTTGCAAAAGGATTGTCCTCAAGCTTCTACGCCTAATGCCACTGTGGCTGTGCGCAACGTCTATGACAGATGGATCAAGGTCAATGACAAGGCTAAGGTCTACATCTTGGTAAGCATATCTGATGTGCTTGCTAAGAAGCACAAGGACACGGTCAATGCTAAGGAGATCATGGACTCGCTGCAGAGCATGTTTGGACAACCATCCTCACAGGCTCGACATGAAGCCTTTAAGTTCATTTACAACTCCTGCATGAAGGAGGGCTCCTCAATGCGACAACATGTTCTCAACCTGATGGTCCACTTCAACGTGGCAGAGTCGAACGGAGCTGTCATAGACGAGCAGAGTAAGGTCAGCTTCAATCTGGAATCTCTTCCGAAGAGTTTCCTGCCATTCCGCAGCAATGCGGTTATGAATAAGCTGTAATACACTCTTACCACGCTCTTAAACGAGCTGCAGACCTACCAATCTCTTATGAAAAGTAAGGGACAAGAAGGGGAGGCAAATGTTGCCACCTCAAAGAGGTTCCACCGAGGTTCGTCCTCTAGAACCAAGTTTGCGCCCTCTTCTTCTGGAAGTAAGACTTTCAAGAAGAAGAAAGCTGCTGGTAAGGGGTTTAAACCTGACTCTGTTGCTGCCGTTGCCAAGAAAGGCAAGGTCAAGGCTGCAGACAAAGGAAAATGTTTCCACAGCAACCTGGACAGGCATTGGAAGCGCAACTGCCAGAAGTACCCGGCCGAAAAGAAGAAAGCCAACGAAGGTAAATATGATTTACTTGTTTTGGAAACATGTTTAGTGGAGAATGATGACTCCGCCTAG

mRNA sequence

ATGGCGCTATGCAGCAATGCCATGGCGCTGCGGGGACAGCACACAGCGCCATGGCACCGTGTCTTAGTGCCACGGCGCTACTGCTGCGGCTTTTTTGATGCAGCAGCGCCGTTCGTCTTGCAAAAGGATTGTCCTCAAGCTTCTACGCCTAATGCCACTGTGGCTGTGCGCAACGTCTATGACAGATGGATCAAGGTCAATGACAAGGCTAAGGTCTACATCTTGGTAAGCATATCTGATGTGCTTGCTAAGAAGCACAAGGACACGGTCAATGCTAAGGAGATCATGGACTCGCTGCAGAGCATGTTTGGACAACCATCCTCACAGGCTCGACATGAAGCCTTTAAGTTCATTTACAACTCCTGCATGAAGGAGGGCTCCTCAATGCGACAACATGTTCTCAACCTGATGGTCCACTTCAACGTGGCAGAGTCGAACGGAGCTGTCATAGACGAGCAGAGTAAGACCTACCAATCTCTTATGAAAAGTAAGGGACAAGAAGGGGAGGCAAATGTTGCCACCTCAAAGAGGTTCCACCGAGGTTCGTCCTCTAGAACCAAGTTTGCGCCCTCTTCTTCTGGAAGTAAGACTTTCAAGAAGAAGAAAGCTGCTGGTAAGGGGTTTAAACCTGACTCTGTTGCTGCCGTTGCCAAGAAAGGCAAGGTCAAGGCTGCAGACAAAGGAAAATGTTTCCACAGCAACCTGGACAGGCATTGGAAGCGCAACTGCCAGAAGTACCCGGCCGAAAAGAAGAAAGCCAACGAAGGTAAATATGATTTACTTGTTTTGGAAACATGTTTAGTGGAGAATGATGACTCCGCCTAG

Coding sequence (CDS)

ATGGCGCTATGCAGCAATGCCATGGCGCTGCGGGGACAGCACACAGCGCCATGGCACCGTGTCTTAGTGCCACGGCGCTACTGCTGCGGCTTTTTTGATGCAGCAGCGCCGTTCGTCTTGCAAAAGGATTGTCCTCAAGCTTCTACGCCTAATGCCACTGTGGCTGTGCGCAACGTCTATGACAGATGGATCAAGGTCAATGACAAGGCTAAGGTCTACATCTTGGTAAGCATATCTGATGTGCTTGCTAAGAAGCACAAGGACACGGTCAATGCTAAGGAGATCATGGACTCGCTGCAGAGCATGTTTGGACAACCATCCTCACAGGCTCGACATGAAGCCTTTAAGTTCATTTACAACTCCTGCATGAAGGAGGGCTCCTCAATGCGACAACATGTTCTCAACCTGATGGTCCACTTCAACGTGGCAGAGTCGAACGGAGCTGTCATAGACGAGCAGAGTAAGACCTACCAATCTCTTATGAAAAGTAAGGGACAAGAAGGGGAGGCAAATGTTGCCACCTCAAAGAGGTTCCACCGAGGTTCGTCCTCTAGAACCAAGTTTGCGCCCTCTTCTTCTGGAAGTAAGACTTTCAAGAAGAAGAAAGCTGCTGGTAAGGGGTTTAAACCTGACTCTGTTGCTGCCGTTGCCAAGAAAGGCAAGGTCAAGGCTGCAGACAAAGGAAAATGTTTCCACAGCAACCTGGACAGGCATTGGAAGCGCAACTGCCAGAAGTACCCGGCCGAAAAGAAGAAAGCCAACGAAGGTAAATATGATTTACTTGTTTTGGAAACATGTTTAGTGGAGAATGATGACTCCGCCTAG

Protein sequence

MALCSNAMALRGQHTAPWHRVLVPRRYCCGFFDAAAPFVLQKDCPQASTPNATVAVRNVYDRWIKVNDKAKVYILVSISDVLAKKHKDTVNAKEIMDSLQSMFGQPSSQARHEAFKFIYNSCMKEGSSMRQHVLNLMVHFNVAESNGAVIDEQSKTYQSLMKSKGQEGEANVATSKRFHRGSSSRTKFAPSSSGSKTFKKKKAAGKGFKPDSVAAVAKKGKVKAADKGKCFHSNLDRHWKRNCQKYPAEKKKANEGKYDLLVLETCLVENDDSA

Homology

[Close]

BLAST of Moc07g11430 vs. NCBI nr
Match: KAA0062993.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 273.9 bits (699), Expect = 1.5e-69
Identity = 158/274 (57.66%), Postives = 188/274 (68.61%), Query Frame = 0


Query: 38  FVLQKDCPQASTPNATVAVRNVYDRWIKVNDKAKVYILVSISDVLAKKHKDTVNAKEIMD 97
           FVL K+CPQ    NAT  VR  Y+RW K N+KA+ YIL S+S+VLAKKH+  + A+EIMD
Sbjct: 154 FVLVKECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMD 213

Query: 98  SLQSMFGQPSSQARHEAFKFIYNSCMKEGSSMRQHVLNLMVHFNVAESNGAVIDEQS--- 157
           SLQ MFGQ S Q +H+A K+IYN+ M EG+S+R+HVLN+MVHFNVAE NGAVIDE S   
Sbjct: 214 SLQEMFGQASYQIKHDALKYIYNARMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVS 273

Query: 158 ---------------------------------KTYQSLMKSKGQEGEANVATS-KRFHR 217
                                            +T++SLMK KGQ+GEANVATS ++FHR
Sbjct: 274 FILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHR 333

Query: 218 GSSSRTKFAPSSSGSKTFKKKKAAGKGFKPDSVAAVAKKGKVKAADKGKCFHSNLDRHWK 275
           GS+S TK  PSSSG+K +KKKK  G+G K +  AA   K K KAA KG CFH N + HWK
Sbjct: 334 GSTSGTKSMPSSSGNKKWKKKK-GGQGNKANLAAAKTTK-KAKAA-KGICFHCNQEGHWK 393

[Close]

BLAST of Moc07g11430 vs. NCBI nr
Match: KAA0044955.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 272.3 bits (695), Expect = 4.5e-69
Identity = 157/274 (57.30%), Postives = 188/274 (68.61%), Query Frame = 0


Query: 38  FVLQKDCPQASTPNATVAVRNVYDRWIKVNDKAKVYILVSISDVLAKKHKDTVNAKEIMD 97
           FVL ++CPQ    NAT  VR  Y+RW K N+KA+ YIL S+S+VLAKKH+  + A+EIMD
Sbjct: 37  FVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMD 96

Query: 98  SLQSMFGQPSSQARHEAFKFIYNSCMKEGSSMRQHVLNLMVHFNVAESNGAVIDEQS--- 157
           SLQ MFGQ S Q +H+A K+IYN+ M EG+S+R+HVLN+MVHFNVAE NGAVIDE S   
Sbjct: 97  SLQEMFGQASYQIKHDALKYIYNARMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVS 156

Query: 158 ---------------------------------KTYQSLMKSKGQEGEANVATS-KRFHR 217
                                            +T++SLMK KGQ+GEANVATS ++FHR
Sbjct: 157 FILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHR 216

Query: 218 GSSSRTKFAPSSSGSKTFKKKKAAGKGFKPDSVAAVAKKGKVKAADKGKCFHSNLDRHWK 275
           GS+S TK  PSSSG+K +KKKK  G+G K +  AA   K K KAA KG CFH N + HWK
Sbjct: 217 GSTSGTKSMPSSSGNKKWKKKK-GGQGNKANLAAAKTTK-KAKAA-KGICFHCNQEGHWK 276

[Close]

BLAST of Moc07g11430 vs. NCBI nr
Match: KAA0048404.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 272.3 bits (695), Expect = 4.5e-69
Identity = 157/274 (57.30%), Postives = 188/274 (68.61%), Query Frame = 0


Query: 38  FVLQKDCPQASTPNATVAVRNVYDRWIKVNDKAKVYILVSISDVLAKKHKDTVNAKEIMD 97
           FVL ++CPQ    NAT  VR  Y+RW K N+KA+ YIL S+S+VLAKKH+  + A+EIMD
Sbjct: 36  FVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMD 95

Query: 98  SLQSMFGQPSSQARHEAFKFIYNSCMKEGSSMRQHVLNLMVHFNVAESNGAVIDEQS--- 157
           SLQ MFGQ S Q +H+A K+IYN+ M EG+S+R+HVLN+MVHFNVAE NGAVIDE S   
Sbjct: 96  SLQEMFGQASYQIKHDALKYIYNARMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVS 155

Query: 158 ---------------------------------KTYQSLMKSKGQEGEANVATS-KRFHR 217
                                            +T++SLMK KGQ+GEANVATS ++FHR
Sbjct: 156 FILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHR 215

Query: 218 GSSSRTKFAPSSSGSKTFKKKKAAGKGFKPDSVAAVAKKGKVKAADKGKCFHSNLDRHWK 275
           GS+S TK  PSSSG+K +KKKK  G+G K +  AA   K K KAA KG CFH N + HWK
Sbjct: 216 GSTSGTKSMPSSSGNKKWKKKK-GGQGNKANLAAAKTTK-KAKAA-KGICFHCNQEGHWK 275

[Close]

BLAST of Moc07g11430 vs. NCBI nr
Match: TYK14550.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 272.3 bits (695), Expect = 4.5e-69
Identity = 157/274 (57.30%), Postives = 188/274 (68.61%), Query Frame = 0


Query: 38  FVLQKDCPQASTPNATVAVRNVYDRWIKVNDKAKVYILVSISDVLAKKHKDTVNAKEIMD 97
           FVL ++CPQ    NAT  VR  Y+RW K N+KA+ YIL S+S+VLAKKH+  + A+EIMD
Sbjct: 37  FVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMD 96

Query: 98  SLQSMFGQPSSQARHEAFKFIYNSCMKEGSSMRQHVLNLMVHFNVAESNGAVIDEQS--- 157
           SLQ MFGQ S Q +H+A K+IYN+ M EG+S+R+HVLN+MVHFNVAE NGAVIDE S   
Sbjct: 97  SLQEMFGQASYQIKHDALKYIYNARMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVS 156

Query: 158 ---------------------------------KTYQSLMKSKGQEGEANVATS-KRFHR 217
                                            +T++SLMK KGQ+GEANVATS ++FHR
Sbjct: 157 FILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHR 216

Query: 218 GSSSRTKFAPSSSGSKTFKKKKAAGKGFKPDSVAAVAKKGKVKAADKGKCFHSNLDRHWK 275
           GS+S TK  PSSSG+K +KKKK  G+G K +  AA   K K KAA KG CFH N + HWK
Sbjct: 217 GSTSGTKSMPSSSGNKKWKKKK-GGQGNKANLAAAKTTK-KTKAA-KGICFHCNQEGHWK 276

[Close]

BLAST of Moc07g11430 vs. NCBI nr
Match: KAA0054490.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 272.3 bits (695), Expect = 4.5e-69
Identity = 157/274 (57.30%), Postives = 188/274 (68.61%), Query Frame = 0


Query: 38  FVLQKDCPQASTPNATVAVRNVYDRWIKVNDKAKVYILVSISDVLAKKHKDTVNAKEIMD 97
           FVL ++CPQ    NAT  VR  Y+RW K N+KA+ YIL S+S+VLAKKH+  + A+EIMD
Sbjct: 37  FVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMD 96

Query: 98  SLQSMFGQPSSQARHEAFKFIYNSCMKEGSSMRQHVLNLMVHFNVAESNGAVIDEQS--- 157
           SLQ MFGQ S Q +H+A K+IYN+ M EG+S+R+HVLN+MVHFNVAE NGAVIDE S   
Sbjct: 97  SLQEMFGQASYQIKHDALKYIYNARMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVS 156

Query: 158 ---------------------------------KTYQSLMKSKGQEGEANVATS-KRFHR 217
                                            +T++SLMK KGQ+GEANVATS ++FHR
Sbjct: 157 FILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHR 216

Query: 218 GSSSRTKFAPSSSGSKTFKKKKAAGKGFKPDSVAAVAKKGKVKAADKGKCFHSNLDRHWK 275
           GS+S TK  PSSSG+K +KKKK  G+G K +  AA   K K KAA KG CFH N + HWK
Sbjct: 217 GSTSGTKSMPSSSGNKKWKKKK-GGQGNKANLAAAKTTK-KAKAA-KGICFHCNQEGHWK 276

[Close]

BLAST of Moc07g11430 vs. ExPASy TrEMBL
Match: A0A5A7V4M1 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G00930 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 7.5e-70
Identity = 158/274 (57.66%), Postives = 188/274 (68.61%), Query Frame = 0


Query: 38  FVLQKDCPQASTPNATVAVRNVYDRWIKVNDKAKVYILVSISDVLAKKHKDTVNAKEIMD 97
           FVL K+CPQ    NAT  VR  Y+RW K N+KA+ YIL S+S+VLAKKH+  + A+EIMD
Sbjct: 154 FVLVKECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMD 213

Query: 98  SLQSMFGQPSSQARHEAFKFIYNSCMKEGSSMRQHVLNLMVHFNVAESNGAVIDEQS--- 157
           SLQ MFGQ S Q +H+A K+IYN+ M EG+S+R+HVLN+MVHFNVAE NGAVIDE S   
Sbjct: 214 SLQEMFGQASYQIKHDALKYIYNARMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVS 273

Query: 158 ---------------------------------KTYQSLMKSKGQEGEANVATS-KRFHR 217
                                            +T++SLMK KGQ+GEANVATS ++FHR
Sbjct: 274 FILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHR 333

Query: 218 GSSSRTKFAPSSSGSKTFKKKKAAGKGFKPDSVAAVAKKGKVKAADKGKCFHSNLDRHWK 275
           GS+S TK  PSSSG+K +KKKK  G+G K +  AA   K K KAA KG CFH N + HWK
Sbjct: 334 GSTSGTKSMPSSSGNKKWKKKK-GGQGNKANLAAAKTTK-KAKAA-KGICFHCNQEGHWK 393

[Close]

BLAST of Moc07g11430 vs. ExPASy TrEMBL
Match: A0A5A7SMH8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G002560 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 2.2e-69
Identity = 157/274 (57.30%), Postives = 188/274 (68.61%), Query Frame = 0


Query: 38  FVLQKDCPQASTPNATVAVRNVYDRWIKVNDKAKVYILVSISDVLAKKHKDTVNAKEIMD 97
           FVL ++CPQ    NAT  VR  Y+RW K N+KA+ YIL S+S+VLAKKH+  + A+EIMD
Sbjct: 37  FVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMD 96

Query: 98  SLQSMFGQPSSQARHEAFKFIYNSCMKEGSSMRQHVLNLMVHFNVAESNGAVIDEQS--- 157
           SLQ MFGQ S Q +H+A K+IYN+ M EG+S+R+HVLN+MVHFNVAE NGAVIDE S   
Sbjct: 97  SLQEMFGQASYQIKHDALKYIYNARMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVS 156

Query: 158 ---------------------------------KTYQSLMKSKGQEGEANVATS-KRFHR 217
                                            +T++SLMK KGQ+GEANVATS ++FHR
Sbjct: 157 FILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHR 216

Query: 218 GSSSRTKFAPSSSGSKTFKKKKAAGKGFKPDSVAAVAKKGKVKAADKGKCFHSNLDRHWK 275
           GS+S TK  PSSSG+K +KKKK  G+G K +  AA   K K KAA KG CFH N + HWK
Sbjct: 217 GSTSGTKSMPSSSGNKKWKKKK-GGQGNKANLAAAKTTK-KAKAA-KGICFHCNQEGHWK 276

[Close]

BLAST of Moc07g11430 vs. ExPASy TrEMBL
Match: A0A5D3CPJ6 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G00040 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 2.2e-69
Identity = 157/274 (57.30%), Postives = 188/274 (68.61%), Query Frame = 0


Query: 38  FVLQKDCPQASTPNATVAVRNVYDRWIKVNDKAKVYILVSISDVLAKKHKDTVNAKEIMD 97
           FVL ++CPQ    NAT  VR  Y+RW K N+KA+ YIL S+S+VLAKKH+  + A+EIMD
Sbjct: 37  FVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMD 96

Query: 98  SLQSMFGQPSSQARHEAFKFIYNSCMKEGSSMRQHVLNLMVHFNVAESNGAVIDEQS--- 157
           SLQ MFGQ S Q +H+A K+IYN+ M EG+S+R+HVLN+MVHFNVAE NGAVIDE S   
Sbjct: 97  SLQEMFGQASYQIKHDALKYIYNARMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVS 156

Query: 158 ---------------------------------KTYQSLMKSKGQEGEANVATS-KRFHR 217
                                            +T++SLMK KGQ+GEANVATS ++FHR
Sbjct: 157 FILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHR 216

Query: 218 GSSSRTKFAPSSSGSKTFKKKKAAGKGFKPDSVAAVAKKGKVKAADKGKCFHSNLDRHWK 275
           GS+S TK  PSSSG+K +KKKK  G+G K +  AA   K K KAA KG CFH N + HWK
Sbjct: 217 GSTSGTKSMPSSSGNKKWKKKK-GGQGNKANLAAAKTTK-KTKAA-KGICFHCNQEGHWK 276

[Close]

BLAST of Moc07g11430 vs. ExPASy TrEMBL
Match: A0A5A7TU93 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G002590 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 2.2e-69
Identity = 157/274 (57.30%), Postives = 188/274 (68.61%), Query Frame = 0


Query: 38  FVLQKDCPQASTPNATVAVRNVYDRWIKVNDKAKVYILVSISDVLAKKHKDTVNAKEIMD 97
           FVL ++CPQ    NAT  VR  Y+RW K N+KA+ YIL S+S+VLAKKH+  + A+EIMD
Sbjct: 37  FVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMD 96

Query: 98  SLQSMFGQPSSQARHEAFKFIYNSCMKEGSSMRQHVLNLMVHFNVAESNGAVIDEQS--- 157
           SLQ MFGQ S Q +H+A K+IYN+ M EG+S+R+HVLN+MVHFNVAE NGAVIDE S   
Sbjct: 97  SLQEMFGQASYQIKHDALKYIYNARMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVS 156

Query: 158 ---------------------------------KTYQSLMKSKGQEGEANVATS-KRFHR 217
                                            +T++SLMK KGQ+GEANVATS ++FHR
Sbjct: 157 FILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHR 216

Query: 218 GSSSRTKFAPSSSGSKTFKKKKAAGKGFKPDSVAAVAKKGKVKAADKGKCFHSNLDRHWK 275
           GS+S TK  PSSSG+K +KKKK  G+G K +  AA   K K KAA KG CFH N + HWK
Sbjct: 217 GSTSGTKSMPSSSGNKKWKKKK-GGQGNKANLAAAKTTK-KAKAA-KGICFHCNQEGHWK 276

[Close]

BLAST of Moc07g11430 vs. ExPASy TrEMBL
Match: A0A5A7TWB9 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G00310 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 2.2e-69
Identity = 157/274 (57.30%), Postives = 188/274 (68.61%), Query Frame = 0


Query: 38  FVLQKDCPQASTPNATVAVRNVYDRWIKVNDKAKVYILVSISDVLAKKHKDTVNAKEIMD 97
           FVL ++CPQ    NAT  VR  Y+RW K N+KA+ YIL S+S+VLAKKH+  + A+EIMD
Sbjct: 37  FVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMD 96

Query: 98  SLQSMFGQPSSQARHEAFKFIYNSCMKEGSSMRQHVLNLMVHFNVAESNGAVIDEQS--- 157
           SLQ MFGQ S Q +H+A K+IYN+ M EG+S+R+HVLN+MVHFNVAE NGAVIDE S   
Sbjct: 97  SLQEMFGQASYQIKHDALKYIYNARMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVS 156

Query: 158 ---------------------------------KTYQSLMKSKGQEGEANVATS-KRFHR 217
                                            +T++SLMK KGQ+GEANVATS ++FHR
Sbjct: 157 FILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHR 216

Query: 218 GSSSRTKFAPSSSGSKTFKKKKAAGKGFKPDSVAAVAKKGKVKAADKGKCFHSNLDRHWK 275
           GS+S TK  PSSSG+K +KKKK  G+G K +  AA   K K KAA KG CFH N + HWK
Sbjct: 217 GSTSGTKSMPSSSGNKKWKKKK-GGQGNKANLAAAKTTK-KAKAA-KGICFHCNQEGHWK 276

The following BLAST results are available for this feature:

BLAST of Moc07g11430 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0062993.1	1.5e-69	57.66	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0044955.1	4.5e-69	57.30	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0048404.1	4.5e-69	57.30	gag/pol protein [Cucumis melo var. makuwa]	[more]
TYK14550.1	4.5e-69	57.30	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0054490.1	4.5e-69	57.30	gag/pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Moc07g11430 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc07g11430 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V4M1	7.5e-70	57.66	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G0093...	[more]
A0A5A7SMH8	2.2e-69	57.30	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G0025...	[more]
A0A5D3CPJ6	2.2e-69	57.30	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G0004...	[more]
A0A5A7TU93	2.2e-69	57.30	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G00259...	[more]
A0A5A7TWB9	2.2e-69	57.30	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G0031...	[more]

BLAST of Moc07g11430 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 63..156 e-value: 6.1E-8 score: 32.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 160..204
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 160..198
None	No IPR available	PANTHER	PTHR35317	OS04G0629600 PROTEIN	coord: 55..158
None	No IPR available	PANTHER	PTHR35317:SF8	POLYPROTEIN-LIKE PROTEIN	coord: 55..158

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc07g11430.1	Moc07g11430.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043170	macromolecule metabolic process
biological_process	GO:0006807	nitrogen compound metabolic process
biological_process	GO:0044238	primary metabolic process
molecular_function	GO:0005488	binding