Moc07g11290 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc07g11290
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Ty3-gypsy retrotransposon protein
Location	chr7: 8736494 .. 8739511 (-)
RNA-Seq Expression	Moc07g11290
Synteny	Moc07g11290

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATAACATGATTGAGAGTCAAGATGTTGATGATGCTGAGTCAAGTCAGACCCTAATTGTCAAAGATAACAACAAAGGAAAGACCATCACTCAAAAAAATCACTCGCAACATTCCACTTCGATCGCTTCACTCTTTGTTCAATAACTCCAAGACATTATAACAAACTCAATCACGGCTCCATACGGTAGACCTTCTCAAAATACTCTCTTGCATTCAAAACCATATTCCAAGAGAATTGACAACTTGAGAATTCCCATTGGATATCAGCCACTTAAGTTCCAACATTTTGACGGGAAAGGCAATCCCAAACAACATATTGCTCACTTCATTGAAACTTGTTAGAAGAATGCCGATACGAGAGGCAATCAATTGGTCAAGCAGTTTGTTCGGACATTGAAGGGAAACACCTTTGACTGGTATACTGATCTAGAGCCTGAAACGATCGAGAGTTGGAAACAACTTGAAGGAGAGTTCCTAAATCGCTTCTATAGTATGAGGCGAACTGTCAACATCATGGAGCTCACCAACTGCAAACAAAGCAAAGGTGAATCGGTTGTCGAGTATATCAACCGATGGAGAGCTCTAAGTCTTGATTACAAAGATAGTCATACTGAACTTTCCGATGTCGAATTATGCACTCAAGGTATGCATTGGGGACTTCTTTACATTCTTCAAGGTATAAAACCTCGCACTTTTAAAGAGCTAGCAACTTGTGCTCGTGATATGGAGCTAAGCATTGCTAGTCAAGGAAGTAAGAATTTTTTAGTACCGAACTTAGAGAAAGAAAGCAAAAGTGTCAAGAAAGCTTCAGATAATCTTTTGGTATAAACACAATCTCTCCCAAGTTGTCTTCAAAAATAAAAGAAAAGAGAATTGAGAAGCAACAAGGAAATGAGAAAGGACGGCTAAGCTTGAAAGAAAGGTAAGAAAAAGTCTATCATTTTCATGATTCGACATCCCTTATCTGTTGGAACAACTACTGGAAACACAATTGCTTGTACTTCAAGAGTGTATACAGCTGGAAGAAATGGGTAAAGTCGATGATCCCAAATATTGCAAGTATCACCGAGTTATCAGTGATCCTGTGGAGAAGTGTTTTGTCCTAAAAGAGCATATCCTAAATTTAGCTCGAGAAAGAAAGATTGAGCTGAATTTCAATGAAATAGCTCAATCAAATCACGTTGCAGTAACAACAAATATAAGCAGCCAAACACGTCAAAGTTTATTTTATAATAAAGAGATAAGCTTGATCGAATTTGGAACTTTGAAGTCTATGTTTATTCACTCTCCACATAAGACTCTAAGAAATGTCTTTAAAGATGTAACATCCATCAATTATGGAGAGGAAGACTAGGTTATTGTGACTCATTGGAAGAAATAAAAACAAAGTTTTTCCAGAGGAGAAAGAAAGCATGGACATGAAGGAAAGAAAAATTTAAAGAAGCCTAAACCAAAGGAGAAAGACAATAAAGACTCGTCTCGACCCAGATATCGGTGACCTTAAAAGAGTTTTTTCCGACAAATTTTTTCCTTGTACAAAAGGAGAAAGAAAATCTTGCAAGTTCACATTACATAAATGTGGAAGAAGTTGACGACTCCAAAGTAACTGAGAAGAGGAATTCTGTCTTCAATCGCATCAAGCCTTCAACTACTTGACCTTCGGTCTTTCAAATGATGAGTAGGACCACAACAAAAAAGAAGAAATCAACGTTTTACTTCCATCTCCACTCGGCCTTGATCAGTCTTTCAAAGGCTAAGTATCTCCACGTAAAAGAAAACTAAATCTTCAAAATCTATTTTTGATCGTTCAGACGCGACAATCGATCAATATGAAAGAATGATGAAGACCGTTGAGGAGAAATCATTTGGTGATGTGACTGATGACAAGAAAATTCAGAGCATTGTTACTTCCTCTATGAAGAGAAAATTCTCCATTCTCATAAATACAGAAGGTTTCTTAAAAGTAAAGCAAAAGTTCTTTATCTCAATTAATCCTAAAAATAGAGGATGTGATGGAAGTTGTGATGAAAATGAGAGCATTTGAAATATAACACTTTTTATCGTACGAGTCTAAACTGCACGTTACTCCTAGCCCGCATGAGTTAAAAAGGTGAACGGGGCCCAAAATAAAAAAAATTTATTGCATCTGAACTACGTTATGACTTGATCTCTTTCTTTGAAAGGGTATGTAGACAACTTAAAGAGAAATTTAAATTCAGTCCAAGTTAAAATAATAATAATAATAGTAAAAAAAGTGAGGCCACAGTGACGCTGCAAAATGTTGGGTTTGTTGCCCTAAACTCATAGTTTGTAATTATGTAAAAATAAATTTATATTCAATAAAGTTTTGTTTTCTTATTCAATCAAATTGTTTTTGAATTTACAACCTTACATTGTCCAAATCCAATAAACTAAACATCCAAGGTTATTATCATGTGACCGAGAAAGTATATATACTGAGTATATATTTGATATACCTTCGATATACATGTGGATAATGTCCCGAAAATAACCTAAAGGGTTTATAGTATATGGATAAGTTTGGGTACCTTATCCTGGTAGCACTACAGATACAGCTCACTTTGTAAATGTTACAAACGACCCGATCCAGGTCATTCGTGTGGAGACATGCGAGTTGGGGTATCCTAAACAATGAGTTTGTATAAGATCGGATAGCGAAAGAGTCAATCTTTAGATGTAACACCGTTCACTAATACATTGGTATTGTTTTATATGAAGTTAGTATATTTTGGATATATGCTGCTTCAATAGTATTGTTTGTGAAGGGACGTTAATCCCGGAGCGGAAGCGGACTTTCGTTGCTGATTTTCAGGATACAAAATCGAATTTTACAGAGGGAAAATACAGAGGAAATTCAAACCTTTGAAGATCGTTTTTTCAGTGAATTCCCCTCGAACACCACCACCGGATCTTCCTCGCTATCCTCTTGGGTCTCGGGATCGTGCTTGTGGTAGCACCTTGATGGAAGAGAGGGAGAGGTTGAGAGAGTTTTGA

mRNA sequence

ATGAATAACATGATTGAGAGTCAAGATGTTGATGATGCTGAGTCAAGTCAGACCCTAATTAATGCCGATACGAGAGGCAATCAATTGGTCAAGCAGTTTGTTCGGACATTGAAGGGAAACACCTTTGACTGGTATACTGATCTAGAGCCTGAAACGATCGAGAGTTGGAAACAACTTGAAGGAGAGTTCCTAAATCGCTTCTATAGTATGAGGCGAACTGTCAACATCATGGAGCTCACCAACTGCAAACAAAGCAAAGGTGAATCGGTTGTCGAGTATATCAACCGATGGAGAGCTCTAAGTCTTGATTACAAAGATAGTCATACTGAACTTTCCGATGTCGAATTATGCACTCAAGGTATGCATTGGGGACTTCTTTACATTCTTCAAGGTATAAAACCTCGCACTTTTAAAGAGCTAGCAACTTGTGCTCGTGATATGGAGCTAAGCATTGCTAGTCAAGGAAACGCGACAATCGATCAATATGAAAGAATGATGAAGACCGTTGAGGAGAAATCATTTGGTGATGTGACTGATGACAAGAAAATTCAGAGCATTGTTACTTCCTCTATGAAGAGAAAATTCTCCATTCTCATAAATACAGAAGGATACAAAATCGAATTTTACAGAGGGAAAATACAGAGGAAATTCAAACCTTTGAAGATCGTTTTTTCAGTGAATTCCCCTCGAACACCACCACCGGATCTTCCTCGCTATCCTCTTGGGTCTCGGGATCGTGCTTGTGGTAGCACCTTGATGGAAGAGAGGGAGAGGTTGAGAGAGTTTTGA

Coding sequence (CDS)

ATGAATAACATGATTGAGAGTCAAGATGTTGATGATGCTGAGTCAAGTCAGACCCTAATTAATGCCGATACGAGAGGCAATCAATTGGTCAAGCAGTTTGTTCGGACATTGAAGGGAAACACCTTTGACTGGTATACTGATCTAGAGCCTGAAACGATCGAGAGTTGGAAACAACTTGAAGGAGAGTTCCTAAATCGCTTCTATAGTATGAGGCGAACTGTCAACATCATGGAGCTCACCAACTGCAAACAAAGCAAAGGTGAATCGGTTGTCGAGTATATCAACCGATGGAGAGCTCTAAGTCTTGATTACAAAGATAGTCATACTGAACTTTCCGATGTCGAATTATGCACTCAAGGTATGCATTGGGGACTTCTTTACATTCTTCAAGGTATAAAACCTCGCACTTTTAAAGAGCTAGCAACTTGTGCTCGTGATATGGAGCTAAGCATTGCTAGTCAAGGAAACGCGACAATCGATCAATATGAAAGAATGATGAAGACCGTTGAGGAGAAATCATTTGGTGATGTGACTGATGACAAGAAAATTCAGAGCATTGTTACTTCCTCTATGAAGAGAAAATTCTCCATTCTCATAAATACAGAAGGATACAAAATCGAATTTTACAGAGGGAAAATACAGAGGAAATTCAAACCTTTGAAGATCGTTTTTTCAGTGAATTCCCCTCGAACACCACCACCGGATCTTCCTCGCTATCCTCTTGGGTCTCGGGATCGTGCTTGTGGTAGCACCTTGATGGAAGAGAGGGAGAGGTTGAGAGAGTTTTGA

Protein sequence

MNNMIESQDVDDAESSQTLINADTRGNQLVKQFVRTLKGNTFDWYTDLEPETIESWKQLEGEFLNRFYSMRRTVNIMELTNCKQSKGESVVEYINRWRALSLDYKDSHTELSDVELCTQGMHWGLLYILQGIKPRTFKELATCARDMELSIASQGNATIDQYERMMKTVEEKSFGDVTDDKKIQSIVTSSMKRKFSILINTEGYKIEFYRGKIQRKFKPLKIVFSVNSPRTPPPDLPRYPLGSRDRACGSTLMEERERLREF

Homology

[Close]

BLAST of Moc07g11290 vs. NCBI nr
Match: KAA0051584.1 (retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 233.4 bits (594), Expect = 2.2e-57
Identity = 118/180 (65.56%), Postives = 137/180 (76.11%), Query Frame = 0


Query: 17  QTLINADTRGNQLVKQFVRTLKGNTFDWYTDLEPETIESWKQLEGEFLNRFYSMRRTVNI 76
           +T  NA +RG+QLV+QF+R+LKGN F+WYTDLEPE I+SWKQLE EFLNRFYS RRTV++
Sbjct: 170 ETCENAGSRGDQLVRQFIRSLKGNVFEWYTDLEPEVIDSWKQLEKEFLNRFYSTRRTVSM 229

Query: 77  MELTNCKQSKGESVVEYINRWRALSLDYKDSHTELSDVELCTQGMHWGLLYILQGIKPRT 136
           MELTN KQ KGE V++YINRWRALSLD KD  TELS VE+CTQGMHWGLLYILQGIKPRT
Sbjct: 230 MELTNTKQRKGEPVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRT 289

Query: 137 FKELATCARDMELSIASQGNATIDQYERMMKTVEEKSFGDVTDDKKIQSIVTSSMKRKFS 196
           F+ELAT A DMELSIAS+G       E      E KS   V      +S+V ++   KFS
Sbjct: 290 FEELATRAHDMELSIASRGTKDFPVPEVRKDKKEAKSAEKVVKSSVKESMVVNTTPLKFS 349

[Close]

BLAST of Moc07g11290 vs. NCBI nr
Match: XP_031742032.1 (uncharacterized protein LOC116404025 [Cucumis sativus])

HSP 1 Score: 231.5 bits (589), Expect = 8.4e-57
Identity = 123/199 (61.81%), Postives = 153/199 (76.88%), Query Frame = 0


Query: 17  QTLINADTRGNQLVKQFVRTLKGNTFDWYTDLEPETIESWKQLEGEFLNRFYSMRRTVNI 76
           +T  NA +RG+QLV+QFVR+LKGN F+WYTDLEPE+IESW+QLE EFLNRFYS RRTV++
Sbjct: 229 ETCENAGSRGDQLVRQFVRSLKGNAFEWYTDLEPESIESWEQLEKEFLNRFYSTRRTVSM 288

Query: 77  MELTNCKQSKGESVVEYINRWRALSLDYKDSHTELSDVELCTQGMHWGLLYILQGIKPRT 136
           MELTN KQ KGE V++YINRWRALSLD KD  TELS VE+CTQGMHWGLLYILQGIKPRT
Sbjct: 289 MELTNTKQRKGEPVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRT 348

Query: 137 FKELATCARDMELSIASQGNATIDQYERMMKTVEEKSFGDVTDDKKIQSIVTSSMKRKFS 196
           F+ELAT A DMELSIAS+G       + ++  V++    D  + K  + IV S++K   S
Sbjct: 349 FEELATRAHDMELSIASRGTK-----DFLVPEVKK----DKKEMKGAEKIVKSTLKE--S 408

Query: 197 ILINTEGYKIEFYRGKIQR 216
           +++NT    ++F +GK  R
Sbjct: 409 MVVNTT--PLKFSKGKEAR 414

[Close]

BLAST of Moc07g11290 vs. NCBI nr
Match: XP_031742199.1 (uncharacterized protein LOC105435721 [Cucumis sativus])

HSP 1 Score: 230.7 bits (587), Expect = 1.4e-56
Identity = 117/180 (65.00%), Postives = 137/180 (76.11%), Query Frame = 0


Query: 17  QTLINADTRGNQLVKQFVRTLKGNTFDWYTDLEPETIESWKQLEGEFLNRFYSMRRTVNI 76
           +T  NA +RG+QLV+QFVR+LKGN F+WYTDLEPE+IESW+QLE EFLNRFYS RRTV++
Sbjct: 229 ETCENAGSRGDQLVRQFVRSLKGNAFEWYTDLEPESIESWEQLEKEFLNRFYSTRRTVSM 288

Query: 77  MELTNCKQSKGESVVEYINRWRALSLDYKDSHTELSDVELCTQGMHWGLLYILQGIKPRT 136
           MELTN KQ KGE V++YINRWRALSLD KD  TELS VE+CTQGMHWGLLYILQGIKPRT
Sbjct: 289 MELTNTKQRKGEPVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRT 348

Query: 137 FKELATCARDMELSIASQGNATIDQYERMMKTVEEKSFGDVTDDKKIQSIVTSSMKRKFS 196
           F+ELAT A DMELSIAS+G       E      E K    +      +S+V ++   KFS
Sbjct: 349 FEELATRAHDMELSIASRGTKDFLVPEVKKDKKEMKGAEKIVKSTSKESMVVNTTPLKFS 408

[Close]

BLAST of Moc07g11290 vs. NCBI nr
Match: XP_031735972.1 (uncharacterized protein LOC116401693 [Cucumis sativus])

HSP 1 Score: 230.7 bits (587), Expect = 1.4e-56
Identity = 117/180 (65.00%), Postives = 137/180 (76.11%), Query Frame = 0


Query: 17  QTLINADTRGNQLVKQFVRTLKGNTFDWYTDLEPETIESWKQLEGEFLNRFYSMRRTVNI 76
           +T  NA +RG+QLV+QFVR+LKGN F+WYTDLEPE+IESW+QLE EFLNRFYS RRTV++
Sbjct: 229 ETCENAGSRGDQLVRQFVRSLKGNAFEWYTDLEPESIESWEQLEKEFLNRFYSTRRTVSM 288

Query: 77  MELTNCKQSKGESVVEYINRWRALSLDYKDSHTELSDVELCTQGMHWGLLYILQGIKPRT 136
           MELTN KQ KGE V++YINRWRALSLD KD  TELS VE+CTQGMHWGLLYILQGIKPRT
Sbjct: 289 MELTNTKQRKGEPVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRT 348

Query: 137 FKELATCARDMELSIASQGNATIDQYERMMKTVEEKSFGDVTDDKKIQSIVTSSMKRKFS 196
           F+ELAT A DMELSIAS+G       E      E K    +      +S+V ++   KFS
Sbjct: 349 FEELATRAHDMELSIASRGTKDFLVPEVKKDKKEMKGAEKIVKSTSKESMVVNTTPLKFS 408

[Close]

BLAST of Moc07g11290 vs. NCBI nr
Match: KAA0039558.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 230.7 bits (587), Expect = 1.4e-56
Identity = 118/180 (65.56%), Postives = 137/180 (76.11%), Query Frame = 0


Query: 17  QTLINADTRGNQLVKQFVRTLKGNTFDWYTDLEPETIESWKQLEGEFLNRFYSMRRTVNI 76
           +T  NA +RG+QLV+QFVR+LKGNTF+WYTDLEPE I+SW+QLE EFLNRFYS+RRTV++
Sbjct: 182 ETCENAGSRGDQLVRQFVRSLKGNTFEWYTDLEPEVIDSWEQLEKEFLNRFYSIRRTVSM 241

Query: 77  MELTNCKQSKGESVVEYINRWRALSLDYKDSHTELSDVELCTQGMHWGLLYILQGIKPRT 136
           MELTN KQ KGE V++YINRWRALSLD KD  TELS VE+CTQGMHWGLLYILQGIKP T
Sbjct: 242 MELTNTKQRKGEPVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPCT 301

Query: 137 FKELATCARDMELSIASQGNATIDQYERMMKTVEEKSFGDVTDDKKIQSIVTSSMKRKFS 196
           F+ELAT A DMELSIAS+G       E      E KS   V      +S+V +    KFS
Sbjct: 302 FEELATRAHDMELSIASRGTKDFPVPEVRKDKKETKSAEKVVKSSVKESMVINMTPLKFS 361

[Close]

BLAST of Moc07g11290 vs. ExPASy TrEMBL
Match: A0A5A7U8E4 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold174G001270 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 1.1e-57
Identity = 118/180 (65.56%), Postives = 137/180 (76.11%), Query Frame = 0


Query: 17  QTLINADTRGNQLVKQFVRTLKGNTFDWYTDLEPETIESWKQLEGEFLNRFYSMRRTVNI 76
           +T  NA +RG+QLV+QF+R+LKGN F+WYTDLEPE I+SWKQLE EFLNRFYS RRTV++
Sbjct: 170 ETCENAGSRGDQLVRQFIRSLKGNVFEWYTDLEPEVIDSWKQLEKEFLNRFYSTRRTVSM 229

Query: 77  MELTNCKQSKGESVVEYINRWRALSLDYKDSHTELSDVELCTQGMHWGLLYILQGIKPRT 136
           MELTN KQ KGE V++YINRWRALSLD KD  TELS VE+CTQGMHWGLLYILQGIKPRT
Sbjct: 230 MELTNTKQRKGEPVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRT 289

Query: 137 FKELATCARDMELSIASQGNATIDQYERMMKTVEEKSFGDVTDDKKIQSIVTSSMKRKFS 196
           F+ELAT A DMELSIAS+G       E      E KS   V      +S+V ++   KFS
Sbjct: 290 FEELATRAHDMELSIASRGTKDFPVPEVRKDKKEAKSAEKVVKSSVKESMVVNTTPLKFS 349

[Close]

BLAST of Moc07g11290 vs. ExPASy TrEMBL
Match: A0A5A7T9K9 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold744G00280 PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 6.9e-57
Identity = 118/180 (65.56%), Postives = 137/180 (76.11%), Query Frame = 0


Query: 17  QTLINADTRGNQLVKQFVRTLKGNTFDWYTDLEPETIESWKQLEGEFLNRFYSMRRTVNI 76
           +T  NA +RG+QLV+QFVR+LKGNTF+WYTDLEPE I+SW+QLE EFLNRFYS+RRTV++
Sbjct: 182 ETCENAGSRGDQLVRQFVRSLKGNTFEWYTDLEPEVIDSWEQLEKEFLNRFYSIRRTVSM 241

Query: 77  MELTNCKQSKGESVVEYINRWRALSLDYKDSHTELSDVELCTQGMHWGLLYILQGIKPRT 136
           MELTN KQ KGE V++YINRWRALSLD KD  TELS VE+CTQGMHWGLLYILQGIKP T
Sbjct: 242 MELTNTKQRKGEPVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPCT 301

Query: 137 FKELATCARDMELSIASQGNATIDQYERMMKTVEEKSFGDVTDDKKIQSIVTSSMKRKFS 196
           F+ELAT A DMELSIAS+G       E      E KS   V      +S+V +    KFS
Sbjct: 302 FEELATRAHDMELSIASRGTKDFPVPEVRKDKKETKSAEKVVKSSVKESMVINMTPLKFS 361

[Close]

BLAST of Moc07g11290 vs. ExPASy TrEMBL
Match: A0A6J1DYQ8 (uncharacterized protein LOC111025834 OS=Momordica charantia OX=3673 GN=LOC111025834 PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 9.1e-57
Identity = 122/174 (70.11%), Postives = 139/174 (79.89%), Query Frame = 0


Query: 17  QTLINADTRGNQLVKQFVRTLKGNTFDWYTDLEPETIESWKQLEGEFLNRFYSMRRTVNI 76
           +T  NA TRG+QLVKQFVRTLKGN FDWYTDLEPETIESW+QLE EFLNRFYS +RTV++
Sbjct: 60  ETCENAGTRGDQLVKQFVRTLKGNAFDWYTDLEPETIESWEQLEKEFLNRFYSTKRTVSM 119

Query: 77  MELTNCKQSKGESVVEYINRWRALSLDYKDSHTELSDVELCTQGMHWGLLYILQGIKPRT 136
           MELTN +Q KGE VVEYINRWRALSLD KD  TELS VELCTQGMHW LLYILQ IKPRT
Sbjct: 120 MELTNSEQRKGEPVVEYINRWRALSLDCKDRLTELSAVELCTQGMHWELLYILQRIKPRT 179

Query: 137 FKELATCARDMELSIASQG--NATIDQYERMMKTVEEKS---FGDVTDDKKIQS 186
           F+ELAT A DMELSIA++G  ++ +   E+  K+VE+ S   FG  T   K+ S
Sbjct: 180 FEELATRAHDMELSIANRGSKDSLVLDLEKESKSVEKTSNEFFGVNTISPKLFS 233

[Close]

BLAST of Moc07g11290 vs. ExPASy TrEMBL
Match: A0A5A7TYI6 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold61G002490 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 5.9e-56
Identity = 115/176 (65.34%), Postives = 141/176 (80.11%), Query Frame = 0


Query: 17  QTLINADTRGNQLVKQFVRTLKGNTFDWYTDLEPETIESWKQLEGEFLNRFYSMRRTVNI 76
           +T  NA +RG+QLV+QFVR+LKGN F+WYTDLEPE I+SW+QLE EFLNRFYS RRTV++
Sbjct: 28  ETCENAGSRGDQLVRQFVRSLKGNAFEWYTDLEPEVIDSWEQLEKEFLNRFYSTRRTVSM 87

Query: 77  MELTNCKQSKGESVVEYINRWRALSLDYKDSHTELSDVELCTQGMHWGLLYILQGIKPRT 136
           MELTN KQ KGE V++YINRWRALSLD KD  TELS VE+CTQGMHWGLLYILQGIKPRT
Sbjct: 88  MELTNTKQRKGEPVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRT 147

Query: 137 FKELATCARDMELSIASQGNATIDQYERMMKTVEEKSFGDVTDDKKI-QSIVTSSM 192
           F+ELAT A DMELSIA++G         + +T+ +K+  ++ D KKI  +++  SM
Sbjct: 148 FEELATRAHDMELSIANRGAKDF----LVQRTMRDKN--EINDTKKIANNVLNESM 197

[Close]

BLAST of Moc07g11290 vs. ExPASy TrEMBL
Match: A0A5D3DU00 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold236G00400 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 5.9e-56
Identity = 115/176 (65.34%), Postives = 141/176 (80.11%), Query Frame = 0


Query: 17  QTLINADTRGNQLVKQFVRTLKGNTFDWYTDLEPETIESWKQLEGEFLNRFYSMRRTVNI 76
           +T  NA +RG+QLV+QFVR+LKGN F+WYTDLEPE I+SW+QLE EFLNRFYS RRTV++
Sbjct: 28  ETCENAGSRGDQLVRQFVRSLKGNAFEWYTDLEPEVIDSWEQLEKEFLNRFYSTRRTVSM 87

Query: 77  MELTNCKQSKGESVVEYINRWRALSLDYKDSHTELSDVELCTQGMHWGLLYILQGIKPRT 136
           MELTN KQ KGE V++YINRWRALSLD KD  TELS VE+CTQGMHWGLLYILQGIKPRT
Sbjct: 88  MELTNTKQRKGEPVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRT 147

Query: 137 FKELATCARDMELSIASQGNATIDQYERMMKTVEEKSFGDVTDDKKI-QSIVTSSM 192
           F+ELAT A DMELSIA++G         + +T+ +K+  ++ D KKI  +++  SM
Sbjct: 148 FEELATRAHDMELSIANRGAKDF----LVQRTMRDKN--EINDTKKIANNVLNESM 197

The following BLAST results are available for this feature:

BLAST of Moc07g11290 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0051584.1	2.2e-57	65.56	retrotransposon gag protein [Cucumis melo var. makuwa]	[more]
XP_031742032.1	8.4e-57	61.81	uncharacterized protein LOC116404025 [Cucumis sativus]	[more]
XP_031742199.1	1.4e-56	65.00	uncharacterized protein LOC105435721 [Cucumis sativus]	[more]
XP_031735972.1	1.4e-56	65.00	uncharacterized protein LOC116401693 [Cucumis sativus]	[more]
KAA0039558.1	1.4e-56	65.56	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]

BLAST of Moc07g11290 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc07g11290 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U8E4	1.1e-57	65.56	Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]
A0A5A7T9K9	6.9e-57	65.56	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A6J1DYQ8	9.1e-57	70.11	uncharacterized protein LOC111025834 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A5A7TYI6	5.9e-56	65.34	Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]
A0A5D3DU00	5.9e-56	65.34	Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]

BLAST of Moc07g11290 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 152..172
None	No IPR available	PANTHER	PTHR33223	FAMILY NOT NAMED	coord: 23..160
IPR005162	Retrotransposon gag domain	PFAM	PF03732	Retrotrans_gag	coord: 33..122 e-value: 9.8E-11 score: 41.8

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc07g11290.1	Moc07g11290.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006259	DNA metabolic process
molecular_function	GO:0140640	catalytic activity, acting on a nucleic acid
molecular_function	GO:0003676	nucleic acid binding