Moc07g06510 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc07g06510
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Ribonuclease H
Location	chr7: 5362338 .. 5363651 (-)
RNA-Seq Expression	Moc07g06510
Synteny	Moc07g06510

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGGAAGATCAAAAAGCCGAGCAGGAGAAAACAAGGAAAGATATTGAGGAGTTGCGAGAAAAGCTAGATGCCATCCTCCTCGTGTTGGAAAAAGGCAAAGCGACTGCAGATCCTGCTACATCTAGCAACCCTATCCATGAGCCGCAAGAAACCCCGCCTTATCCACCTGGGTACGGTCCACCTCTTAGGCCAGTGGCAGAGGGTTTCATGCCACAATATACAACGTACAACCCTCTGTATGACGTCCCGATTGGTCAGTATCCGCATACCTTTGTTAAGGGAGCTCAGCAAATCCCAACCAACATCATTTTTCGAGAGCCCGAGCAAATGATGTCACCCCCTACAGTCCTTAACCTAGGTGGTCTCCCAGCCAAGACAGACCCAGTCGGACAAAATGCTCCCAGTAACGAGAAGTTAGAAGTTCTGGAGGAAAGATTAAGAGCAATAGAGGGGACAGACGTTTTTGGCAACATCGATGCCTCACAATTATGCTTGGTGTCTGGATTAGTCATCCCTCCAAAATTCAAGGTGCCAGAGTTTGAGAAGTACGATGGTTCTTCTTGTCCTAAGAATCATCTTATAATGTACTGTAGGAAGATGGCAGCGTACGTCCAAAATTACAAATTGTTGATACACTGCTTTCAAGATAGTTTATATGGTCCGGCCTCTCGTTGGTACATGCAGTTAGATAGCTCTCATGTTGGCTCGTGGAAGAATCTGGCCGACTCCTTCCTAAAACAATATAAGCATAACATAGACATGGCTCCAGATCGCTTAGATTTACAGAGGATGGAGAAGAATAGTACAGAGAGCTTTAAGGAGTATGCTCAAAGGTGGAGGGACACGGCAGCTCAAGTCCAACCTCCTTTAACAGATAAGGAGCTATCTGCCATGTTCATCAATACCCTAAAACATCCTTTCTATGATCGGATGATAGGAAGTGCTTCCACAAATTTCTCTGATATTATGACCATCGGAGAAAGGATCGAATACGGGGTTAGACATAAGCGAATAACCAGTACTGCCGATGAGCCATTAGCTGCAAAGAAGGCAAGTCATTCCAAGAAGAAGGAAGGTGAGGTGCAAATGGTGGGAGCAGACCGACATTCTTGGAAGCAACAACCATACAGTCGGACACCGCGATACACTCCGTATTATTACCCAACGCCATACGGGTATAATCAACCATTTATGAATAATGCAACTTCACATTACTCCCTTTATGCTTCCCAAAATTTTCGACCCCCAGCCAGTCAAAATTTCCAACCTAGGGGTCAGCAGCATAATACATTCTATACTCAAGGACAGTAG

mRNA sequence

ATGATGGAAGATCAAAAAGCCGAGCAGGAGAAAACAAGGAAAGATATTGAGGAGTTGCGAGAAAAGCTAGATGCCATCCTCCTCGTGTTGGAAAAAGGCAAAGCGACTGCAGATCCTGCTACATCTAGCAACCCTATCCATGAGCCGCAAGAAACCCCGCCTTATCCACCTGGGTACGGTCCACCTCTTAGGCCAGTGGCAGAGGGTTTCATGCCACAATATACAACGTACAACCCTCTGTATGACGTCCCGATTGGTCAGTATCCGCATACCTTTGTTAAGGGAGCTCAGCAAATCCCAACCAACATCATTTTTCGAGAGCCCGAGCAAATGATGTCACCCCCTACAGTCCTTAACCTAGGTGGTCTCCCAGCCAAGACAGACCCAGTCGGACAAAATGCTCCCAGTAACGAGAAGTTAGAAGTTCTGGAGGAAAGATTAAGAGCAATAGAGGGGACAGACGTTTTTGGCAACATCGATGCCTCACAATTATGCTTGGTGTCTGGATTAGTCATCCCTCCAAAATTCAAGGTGCCAGAGTTTGAGAAGTACGATGGTTCTTCTTGTCCTAAGAATCATCTTATAATGTACTGTAGGAAGATGGCAGCGTACGTCCAAAATTACAAATTGTTGATACACTGCTTTCAAGATAGTTTATATGGTCCGGCCTCTCGTTGGTACATGCAGTTAGATAGCTCTCATGTTGGCTCGTGGAAGAATCTGGCCGACTCCTTCCTAAAACAATATAAGCATAACATAGACATGGCTCCAGATCGCTTAGATTTACAGAGGATGGAGAAGAATAGTACAGAGAGCTTTAAGGAGTATGCTCAAAGGTGGAGGGACACGGCAGCTCAAGTCCAACCTCCTTTAACAGATAAGGAGCTATCTGCCATGTTCATCAATACCCTAAAACATCCTTTCTATGATCGGATGATAGGAAGTGCTTCCACAAATTTCTCTGATATTATGACCATCGGAGAAAGGATCGAATACGGGGTTAGACATAAGCGAATAACCAGTACTGCCGATGAGCCATTAGCTGCAAAGAAGGCAAGTCATTCCAAGAAGAAGGAAGGTGAGGTGCAAATGGTGGGAGCAGACCGACATTCTTGGAAGCAACAACCATACAGTCGGACACCGCGATACACTCCGTATTATTACCCAACGCCATACGGGTATAATCAACCATTTATGAATAATGCAACTTCACATTACTCCCTTTATGCTTCCCAAAATTTTCGACCCCCAGCCAGTCAAAATTTCCAACCTAGGGGTCAGCAGCATAATACATTCTATACTCAAGGACAGTAG

Coding sequence (CDS)

ATGATGGAAGATCAAAAAGCCGAGCAGGAGAAAACAAGGAAAGATATTGAGGAGTTGCGAGAAAAGCTAGATGCCATCCTCCTCGTGTTGGAAAAAGGCAAAGCGACTGCAGATCCTGCTACATCTAGCAACCCTATCCATGAGCCGCAAGAAACCCCGCCTTATCCACCTGGGTACGGTCCACCTCTTAGGCCAGTGGCAGAGGGTTTCATGCCACAATATACAACGTACAACCCTCTGTATGACGTCCCGATTGGTCAGTATCCGCATACCTTTGTTAAGGGAGCTCAGCAAATCCCAACCAACATCATTTTTCGAGAGCCCGAGCAAATGATGTCACCCCCTACAGTCCTTAACCTAGGTGGTCTCCCAGCCAAGACAGACCCAGTCGGACAAAATGCTCCCAGTAACGAGAAGTTAGAAGTTCTGGAGGAAAGATTAAGAGCAATAGAGGGGACAGACGTTTTTGGCAACATCGATGCCTCACAATTATGCTTGGTGTCTGGATTAGTCATCCCTCCAAAATTCAAGGTGCCAGAGTTTGAGAAGTACGATGGTTCTTCTTGTCCTAAGAATCATCTTATAATGTACTGTAGGAAGATGGCAGCGTACGTCCAAAATTACAAATTGTTGATACACTGCTTTCAAGATAGTTTATATGGTCCGGCCTCTCGTTGGTACATGCAGTTAGATAGCTCTCATGTTGGCTCGTGGAAGAATCTGGCCGACTCCTTCCTAAAACAATATAAGCATAACATAGACATGGCTCCAGATCGCTTAGATTTACAGAGGATGGAGAAGAATAGTACAGAGAGCTTTAAGGAGTATGCTCAAAGGTGGAGGGACACGGCAGCTCAAGTCCAACCTCCTTTAACAGATAAGGAGCTATCTGCCATGTTCATCAATACCCTAAAACATCCTTTCTATGATCGGATGATAGGAAGTGCTTCCACAAATTTCTCTGATATTATGACCATCGGAGAAAGGATCGAATACGGGGTTAGACATAAGCGAATAACCAGTACTGCCGATGAGCCATTAGCTGCAAAGAAGGCAAGTCATTCCAAGAAGAAGGAAGGTGAGGTGCAAATGGTGGGAGCAGACCGACATTCTTGGAAGCAACAACCATACAGTCGGACACCGCGATACACTCCGTATTATTACCCAACGCCATACGGGTATAATCAACCATTTATGAATAATGCAACTTCACATTACTCCCTTTATGCTTCCCAAAATTTTCGACCCCCAGCCAGTCAAAATTTCCAACCTAGGGGTCAGCAGCATAATACATTCTATACTCAAGGACAGTAG

Protein sequence

MMEDQKAEQEKTRKDIEELREKLDAILLVLEKGKATADPATSSNPIHEPQETPPYPPGYGPPLRPVAEGFMPQYTTYNPLYDVPIGQYPHTFVKGAQQIPTNIIFREPEQMMSPPTVLNLGGLPAKTDPVGQNAPSNEKLEVLEERLRAIEGTDVFGNIDASQLCLVSGLVIPPKFKVPEFEKYDGSSCPKNHLIMYCRKMAAYVQNYKLLIHCFQDSLYGPASRWYMQLDSSHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKNSTESFKEYAQRWRDTAAQVQPPLTDKELSAMFINTLKHPFYDRMIGSASTNFSDIMTIGERIEYGVRHKRITSTADEPLAAKKASHSKKKEGEVQMVGADRHSWKQQPYSRTPRYTPYYYPTPYGYNQPFMNNATSHYSLYASQNFRPPASQNFQPRGQQHNTFYTQGQ

Homology

[Close]

BLAST of Moc07g06510 vs. NCBI nr
Match: XP_022157796.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111024415 [Momordica charantia])

HSP 1 Score: 701.4 bits (1809), Expect = 4.8e-198
Identity = 349/367 (95.10%), Postives = 350/367 (95.37%), Query Frame = 0


Query: 2   MEDQKAEQEKTRKDIEELREKLDAILLVLEKGKATADPATSSNPIHEPQETPPYPPGYGP 61
           MEDQKAEQEKTRKDIEELREKLD I L LEKGKATADPATSSNPIHEPQETPPYPPGYGP
Sbjct: 1   MEDQKAEQEKTRKDIEELREKLDXIXLXLEKGKATADPATSSNPIHEPQETPPYPPGYGP 60

Query: 62  PLRPVAEGFMPQYTTYNPLYDVPIGQYPHTFVKGAQQIPTNIIFREPEQMMSPPTVLNLG 121
           PLRPVAEGFMPQYTTYNPLYDVPIGQYPHTFVKGAQQIPTNIIFREPEQMMSPPTV NLG
Sbjct: 61  PLRPVAEGFMPQYTTYNPLYDVPIGQYPHTFVKGAQQIPTNIIFREPEQMMSPPTVXNLG 120

Query: 122 GLPAKTDPVGQNAPSNEKLEVLEERLRAIEGTDVFGNIDASQLCLVSGLVIPPKFKVPEF 181
           G PAKTDPV QNA S EK EVLEERLRAIEGTDVFGNIDASQLCLVSGLVIPPKFKVPEF
Sbjct: 121 GXPAKTDPVXQNAXSXEKXEVLEERLRAIEGTDVFGNIDASQLCLVSGLVIPPKFKVPEF 180

Query: 182 EKYDGSSCPKNHLIMYCRKMAAYVQNYKLLIHCFQDSLYGPASRWYMQLDSSHVGSWKNL 241
           EKYDGSSCPKNHLIMYCRKM AYVQN KLLIHCFQDSL G ASRWYMQLDSSHVGSWKNL
Sbjct: 181 EKYDGSSCPKNHLIMYCRKMXAYVQNXKLLIHCFQDSLXGXASRWYMQLDSSHVGSWKNL 240

Query: 242 ADSFLKQYKHNIDMAPDRLDLQRMEKNSTESFKEYAQRWRDTAAQVQPPLTDKELSAMFI 301
           ADSFLKQYKHNIDMAPDRLDLQRMEKNSTESFKEYAQRWRDTAAQVQPPLTDKELSAMFI
Sbjct: 241 ADSFLKQYKHNIDMAPDRLDLQRMEKNSTESFKEYAQRWRDTAAQVQPPLTDKELSAMFI 300

Query: 302 NTLKHPFYDRMIGSASTNFSDIMTIGERIEYGVRHKRITSTADEPLAAKKASHSKKKEGE 361
           NTLKHPFYDRMIGSASTNFSDIMTIGERIEYGVRHKRITSTADEPLAAKKASHSKKKEGE
Sbjct: 301 NTLKHPFYDRMIGSASTNFSDIMTIGERIEYGVRHKRITSTADEPLAAKKASHSKKKEGE 360

Query: 362 VQMVGAD 369
           +  V  D
Sbjct: 361 LTPVPVD 367

[Close]

BLAST of Moc07g06510 vs. NCBI nr
Match: XP_022147189.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111016200 [Momordica charantia])

HSP 1 Score: 694.1 bits (1790), Expect = 7.6e-196
Identity = 342/376 (90.96%), Postives = 349/376 (92.82%), Query Frame = 0


Query: 71  MPQYTTYNPLYDVPIGQYPHTFVKGAQQIPTNIIFREPEQMMSPPTVLNLGGLPAKTDPV 130
           MPQYTTYNPLYDVP+GQY H FVKGAQQIPTNIIFREPEQMMSPPTVLNLG L AKTDPV
Sbjct: 1   MPQYTTYNPLYDVPVGQYLHPFVKGAQQIPTNIIFREPEQMMSPPTVLNLGDLLAKTDPV 60

Query: 131 GQNAPSNEKLEVLEERLRAIEGTDVFGNIDASQLCLVSGLVIPPKFKVPEFEKYDGSSCP 190
           GQNAPSNEK EVL+ERLRAIE TDVFGNIDASQLC VSGLVIPPK KVPEFEKY+GSSCP
Sbjct: 61  GQNAPSNEKFEVLKERLRAIERTDVFGNIDASQLCSVSGLVIPPKLKVPEFEKYNGSSCP 120

Query: 191 KNHLIMYCRKMAAYVQNYKLLIHCFQDSLYGPASRWYMQLDSSHVGSWKNLADSFLKQYK 250
           KNHL MYCRKMAAYVQN KLLIHCFQDSL GPASRWYMQLDSSHVGSWKNLADSFLKQYK
Sbjct: 121 KNHLXMYCRKMAAYVQNDKLLIHCFQDSLSGPASRWYMQLDSSHVGSWKNLADSFLKQYK 180

Query: 251 HNIDMAPDRLDLQRMEKNSTESFKEYAQRWRDTAAQVQPPLTDKELSAMFINTLKHPFYD 310
           HNIDMAPDRLDLQRMEK ST+SFKEYAQRWRDTAAQVQPPL DKELSAMFINTLKHPFYD
Sbjct: 181 HNIDMAPDRLDLQRMEKKSTKSFKEYAQRWRDTAAQVQPPLIDKELSAMFINTLKHPFYD 240

Query: 311 RMIGSASTNFSDIMTIGERIEYGVRHKRITSTADEPLAAKKASHSKKKEGEVQMVGADRH 370
           RMIGSASTNFSDIMTIGERIEYGVRH RITST DEPLAAKKASHSKKKEGEVQMVGADRH
Sbjct: 241 RMIGSASTNFSDIMTIGERIEYGVRHGRITSTTDEPLAAKKASHSKKKEGEVQMVGADRH 300

Query: 371 SWKQQPYSRTPRYTPYYYPTPYGYNQPFMNNATSHYSLYASQNFRPPA---------SQN 430
           SWKQQPY RTP+Y+PYYYPTPYGYNQPF+NNATSHY  YASQNFRPPA         SQN
Sbjct: 301 SWKQQPYRRTPQYSPYYYPTPYGYNQPFVNNATSHYYPYASQNFRPPASQNFQLTPTSQN 360

Query: 431 FQPRGQQHNTFYTQGQ 438
           FQPRGQQHNTFYTQGQ
Sbjct: 361 FQPRGQQHNTFYTQGQ 376

[Close]

BLAST of Moc07g06510 vs. NCBI nr
Match: XP_022155098.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111022231, partial [Momordica charantia])

HSP 1 Score: 662.5 bits (1708), Expect = 2.5e-186
Identity = 334/444 (75.23%), Postives = 365/444 (82.21%), Query Frame = 0


Query: 1   MMEDQKAEQEKTRKDIEELREKLDAILLVLEKGKATADPATSSNPIHEPQETPPYPPGY- 60
           M +D+K+EQEKTRKDIEELREKLDAILL LEKGK  A+   +SNPIHEP  TP +PPG+ 
Sbjct: 1   MEDDRKSEQEKTRKDIEELREKLDAILLALEKGKTIAE---TSNPIHEP-PTPQFPPGFE 60

Query: 61  ------GPPLRPVAEGFMPQYTTYNPLYDVPIGQYPHTFVKGAQQIPTNIIFREPEQMMS 120
                 GP  RP+ EGFM QYTTYNPLYD+P GQ+P   V+G  Q P  IIF+EPEQ+++
Sbjct: 61  PSFRPAGPSFRPMTEGFMSQYTTYNPLYDIPAGQFPPPLVRGPPQAPAGIIFQEPEQVIA 120

Query: 121 PPTVLNLGGLPAKTDPVGQNAPSNEKLEVLEERLRAIEGTDVFGNIDASQLCLVSGLVIP 180
           PPTVLNLGG  A  DP  Q APS+EKLEVLEERLRA+EGTDVFGNIDASQLCL SGLVIP
Sbjct: 121 PPTVLNLGGPQANKDPERQEAPSSEKLEVLEERLRAVEGTDVFGNIDASQLCLXSGLVIP 180

Query: 181 PKFKVPEFEKYDGSSCPKNHLIMYCRKMAAYVQNYKLLIHCFQDSLYGPASRWYMQLDSS 240
           PKFK+PEFEKY+GSSCPKNHLIMYCRKMAAY+QN KLLIHCFQDSL GP S WYM LDS 
Sbjct: 181 PKFKIPEFEKYBGSSCPKNHLIMYCRKMAAYIQNDKLLIHCFQDSLSGPXSXWYMHLDSX 240

Query: 241 HVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKNSTESFKEYAQRWRDTAAQVQPPLTD 300
           HV SWKNLADSFLKQYKHNIDM  DRLDLQ MEK + ESFKEY QRWRDTAAQ QPP TD
Sbjct: 241 HVXSWKNLADSFLKQYKHNIDMXXDRLDLQXMEKKTXESFKEYXQRWRDTAAQXQPPXTD 300

Query: 301 KELSAMFINTLKHPFYDRMIGSASTNFSDIMTIGERIEYGVRHKRITSTADEPLAAKKAS 360
           KELS+MFINTLKHPFYDRMIGSAST+FSDI+TIGERIEYGV H RITST  E    K  +
Sbjct: 301 KELSSMFINTLKHPFYDRMIGSASTSFSDILTIGERIEYGVXHGRITSTVGESSTXKXXT 360

Query: 361 HSKKKEGEVQMVGADRHSWKQQPYSRTPRYTPYYYPTPYGYNQPFMNNATSHYSLYASQN 420
            SKKKEGEVQMVGADRH W+Q PY +T  Y PYYYP+PYGYNQP++N AT  Y+  ASQN
Sbjct: 361 SSKKKEGEVQMVGADRHVWRQPPYGKTXXYAPYYYPSPYGYNQPYVNXATFQYT--ASQN 420

Query: 421 FRPPASQNFQPRGQQHNTFYTQGQ 438
           FRPPASQ FQPRG Q NT YTQGQ
Sbjct: 421 FRPPASQGFQPRGYQQNTVYTQGQ 438

[Close]

BLAST of Moc07g06510 vs. NCBI nr
Match: XP_022158986.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111025431 [Momordica charantia])

HSP 1 Score: 625.5 bits (1612), Expect = 3.3e-175
Identity = 311/336 (92.56%), Postives = 314/336 (93.45%), Query Frame = 0


Query: 111 MMSPPTVLNLGGLPAKTDPVGQNAPSNEKLEVLEERLRAIEGTDVFGNIDASQLCLVSGL 170
           MMSPPTVLNLGGLPAKTD VGQNAPSNEK EVLEERLRAIEGT VFGNIDASQLCLVSGL
Sbjct: 1   MMSPPTVLNLGGLPAKTDLVGQNAPSNEKFEVLEERLRAIEGTYVFGNIDASQLCLVSGL 60

Query: 171 VIPPKFKVPEFEKYDGSSCPKNHLIMYCRKMAAYVQNYKLLIHCFQDSLYGPASRWYMQL 230
           VIPPKFKVPEFEKYDGSSCPKNHLIMYCRKMAAYVQN KLLIHCFQDSL GPASRWYMQL
Sbjct: 61  VIPPKFKVPEFEKYDGSSCPKNHLIMYCRKMAAYVQNDKLLIHCFQDSLSGPASRWYMQL 120

Query: 231 DSSHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKNSTESFKEYAQRWRDTAAQVQPP 290
           DSS+VGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEK STESFKEYAQRWRDTAAQVQPP
Sbjct: 121 DSSNVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKKSTESFKEYAQRWRDTAAQVQPP 180

Query: 291 LTDKELSAMFINTLKHPFYDRMIGSASTNFSDIMTIGERIEYGVRHKRITSTADEPLAAK 350
           LTDKELSAMFINTLKHPFYDRMIG+ASTNFSDIMTIGERIEYGVRH RITST DEPLAAK
Sbjct: 181 LTDKELSAMFINTLKHPFYDRMIGNASTNFSDIMTIGERIEYGVRHGRITSTVDEPLAAK 240

Query: 351 KASHSKKKEGEVQMVGADRHSWKQQPYSRTPRYTPYYYPTPYGYNQPFMNNATSHYSLYA 410
           KASHSKKKEGEVQMVGADRHSWKQQPYSRTPRYTPYYYPTPYGYNQPF+NNATSHYS Y 
Sbjct: 241 KASHSKKKEGEVQMVGADRHSWKQQPYSRTPRYTPYYYPTPYGYNQPFVNNATSHYSPYT 300

Query: 411 SQNFRP---------PASQNFQPRGQQHNTFYTQGQ 438
            QNFRP         PASQNFQPRGQQHNT YTQ Q
Sbjct: 301 FQNFRPPASQNFQPTPASQNFQPRGQQHNTLYTQEQ 336

[Close]

BLAST of Moc07g06510 vs. NCBI nr
Match: XP_022143495.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111013372 [Momordica charantia])

HSP 1 Score: 471.1 bits (1211), Expect = 1.1e-128
Identity = 235/259 (90.73%), Postives = 238/259 (91.89%), Query Frame = 0


Query: 121 GGLPAKTDPVGQNAPSNEKLEVLEERLRAIEGTDVFGNIDASQLCLVSGLVIPPKFKVPE 180
           GGLPAKTDPVGQNAPSNEK EVL+ERLRAIEGTDVFGNIDASQLCLVS LVIPPKFKVPE
Sbjct: 62  GGLPAKTDPVGQNAPSNEKFEVLKERLRAIEGTDVFGNIDASQLCLVSRLVIPPKFKVPE 121

Query: 181 FEKYDGSSCPKNHLIMYCRKMAAYVQNYKLLIHCFQDSLYGPASRWYMQLDSSHVGSWKN 240
           FEKYDGSSCPKNHLIMYCRKMAAYVQN KLLIHCFQDSL  PASRWYMQLDSSHVGSWKN
Sbjct: 122 FEKYDGSSCPKNHLIMYCRKMAAYVQNDKLLIHCFQDSLSSPASRWYMQLDSSHVGSWKN 181

Query: 241 LADSFLKQYKHNIDMAPDRLDLQRMEKNSTESFKEYAQRWRDTAAQVQPPLTDKELSAMF 300
           LADSFLKQYKHNIDMAPDRLDLQRMEK STESFKEYAQRWRDTAAQVQPPLTDKELS MF
Sbjct: 182 LADSFLKQYKHNIDMAPDRLDLQRMEKKSTESFKEYAQRWRDTAAQVQPPLTDKELSXMF 241

Query: 301 INTLKHPFYDRMIGSASTNFSDIMTIGERIEYGVRHKRITSTADEPLAAKKASHSKKKEG 360
           INTLKHPFYDRM+GSASTNFSDIM IGERIEYGVRH RITSTADEPLAAKK SHSKKKEG
Sbjct: 242 INTLKHPFYDRMVGSASTNFSDIMAIGERIEYGVRHGRITSTADEPLAAKKTSHSKKKEG 301

Query: 361 EVQMVGADRHSWKQQPYSR 380
           E+  V  D     Q PY R
Sbjct: 302 ELAHVPVDP---IQPPYPR 317

[Close]

BLAST of Moc07g06510 vs. ExPASy TrEMBL
Match: A0A6J1DZ90 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111024415 PE=4 SV=1)

HSP 1 Score: 701.4 bits (1809), Expect = 2.3e-198
Identity = 349/367 (95.10%), Postives = 350/367 (95.37%), Query Frame = 0


Query: 2   MEDQKAEQEKTRKDIEELREKLDAILLVLEKGKATADPATSSNPIHEPQETPPYPPGYGP 61
           MEDQKAEQEKTRKDIEELREKLD I L LEKGKATADPATSSNPIHEPQETPPYPPGYGP
Sbjct: 1   MEDQKAEQEKTRKDIEELREKLDXIXLXLEKGKATADPATSSNPIHEPQETPPYPPGYGP 60

Query: 62  PLRPVAEGFMPQYTTYNPLYDVPIGQYPHTFVKGAQQIPTNIIFREPEQMMSPPTVLNLG 121
           PLRPVAEGFMPQYTTYNPLYDVPIGQYPHTFVKGAQQIPTNIIFREPEQMMSPPTV NLG
Sbjct: 61  PLRPVAEGFMPQYTTYNPLYDVPIGQYPHTFVKGAQQIPTNIIFREPEQMMSPPTVXNLG 120

Query: 122 GLPAKTDPVGQNAPSNEKLEVLEERLRAIEGTDVFGNIDASQLCLVSGLVIPPKFKVPEF 181
           G PAKTDPV QNA S EK EVLEERLRAIEGTDVFGNIDASQLCLVSGLVIPPKFKVPEF
Sbjct: 121 GXPAKTDPVXQNAXSXEKXEVLEERLRAIEGTDVFGNIDASQLCLVSGLVIPPKFKVPEF 180

Query: 182 EKYDGSSCPKNHLIMYCRKMAAYVQNYKLLIHCFQDSLYGPASRWYMQLDSSHVGSWKNL 241
           EKYDGSSCPKNHLIMYCRKM AYVQN KLLIHCFQDSL G ASRWYMQLDSSHVGSWKNL
Sbjct: 181 EKYDGSSCPKNHLIMYCRKMXAYVQNXKLLIHCFQDSLXGXASRWYMQLDSSHVGSWKNL 240

Query: 242 ADSFLKQYKHNIDMAPDRLDLQRMEKNSTESFKEYAQRWRDTAAQVQPPLTDKELSAMFI 301
           ADSFLKQYKHNIDMAPDRLDLQRMEKNSTESFKEYAQRWRDTAAQVQPPLTDKELSAMFI
Sbjct: 241 ADSFLKQYKHNIDMAPDRLDLQRMEKNSTESFKEYAQRWRDTAAQVQPPLTDKELSAMFI 300

Query: 302 NTLKHPFYDRMIGSASTNFSDIMTIGERIEYGVRHKRITSTADEPLAAKKASHSKKKEGE 361
           NTLKHPFYDRMIGSASTNFSDIMTIGERIEYGVRHKRITSTADEPLAAKKASHSKKKEGE
Sbjct: 301 NTLKHPFYDRMIGSASTNFSDIMTIGERIEYGVRHKRITSTADEPLAAKKASHSKKKEGE 360

Query: 362 VQMVGAD 369
           +  V  D
Sbjct: 361 LTPVPVD 367

[Close]

BLAST of Moc07g06510 vs. ExPASy TrEMBL
Match: A0A6J1D099 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111016200 PE=4 SV=1)

HSP 1 Score: 694.1 bits (1790), Expect = 3.7e-196
Identity = 342/376 (90.96%), Postives = 349/376 (92.82%), Query Frame = 0


Query: 71  MPQYTTYNPLYDVPIGQYPHTFVKGAQQIPTNIIFREPEQMMSPPTVLNLGGLPAKTDPV 130
           MPQYTTYNPLYDVP+GQY H FVKGAQQIPTNIIFREPEQMMSPPTVLNLG L AKTDPV
Sbjct: 1   MPQYTTYNPLYDVPVGQYLHPFVKGAQQIPTNIIFREPEQMMSPPTVLNLGDLLAKTDPV 60

Query: 131 GQNAPSNEKLEVLEERLRAIEGTDVFGNIDASQLCLVSGLVIPPKFKVPEFEKYDGSSCP 190
           GQNAPSNEK EVL+ERLRAIE TDVFGNIDASQLC VSGLVIPPK KVPEFEKY+GSSCP
Sbjct: 61  GQNAPSNEKFEVLKERLRAIERTDVFGNIDASQLCSVSGLVIPPKLKVPEFEKYNGSSCP 120

Query: 191 KNHLIMYCRKMAAYVQNYKLLIHCFQDSLYGPASRWYMQLDSSHVGSWKNLADSFLKQYK 250
           KNHL MYCRKMAAYVQN KLLIHCFQDSL GPASRWYMQLDSSHVGSWKNLADSFLKQYK
Sbjct: 121 KNHLXMYCRKMAAYVQNDKLLIHCFQDSLSGPASRWYMQLDSSHVGSWKNLADSFLKQYK 180

Query: 251 HNIDMAPDRLDLQRMEKNSTESFKEYAQRWRDTAAQVQPPLTDKELSAMFINTLKHPFYD 310
           HNIDMAPDRLDLQRMEK ST+SFKEYAQRWRDTAAQVQPPL DKELSAMFINTLKHPFYD
Sbjct: 181 HNIDMAPDRLDLQRMEKKSTKSFKEYAQRWRDTAAQVQPPLIDKELSAMFINTLKHPFYD 240

Query: 311 RMIGSASTNFSDIMTIGERIEYGVRHKRITSTADEPLAAKKASHSKKKEGEVQMVGADRH 370
           RMIGSASTNFSDIMTIGERIEYGVRH RITST DEPLAAKKASHSKKKEGEVQMVGADRH
Sbjct: 241 RMIGSASTNFSDIMTIGERIEYGVRHGRITSTTDEPLAAKKASHSKKKEGEVQMVGADRH 300

Query: 371 SWKQQPYSRTPRYTPYYYPTPYGYNQPFMNNATSHYSLYASQNFRPPA---------SQN 430
           SWKQQPY RTP+Y+PYYYPTPYGYNQPF+NNATSHY  YASQNFRPPA         SQN
Sbjct: 301 SWKQQPYRRTPQYSPYYYPTPYGYNQPFVNNATSHYYPYASQNFRPPASQNFQLTPTSQN 360

Query: 431 FQPRGQQHNTFYTQGQ 438
           FQPRGQQHNTFYTQGQ
Sbjct: 361 FQPRGQQHNTFYTQGQ 376

[Close]

BLAST of Moc07g06510 vs. ExPASy TrEMBL
Match: A0A6J1DM29 (LOW QUALITY PROTEIN: uncharacterized protein LOC111022231 OS=Momordica charantia OX=3673 GN=LOC111022231 PE=4 SV=1)

HSP 1 Score: 663.3 bits (1710), Expect = 7.0e-187
Identity = 335/444 (75.45%), Postives = 365/444 (82.21%), Query Frame = 0


Query: 1   MMEDQKAEQEKTRKDIEELREKLDAILLVLEKGKATADPATSSNPIHEPQETPPYPPGY- 60
           M +D+K+EQEKTRKDIEELREKLDAILL LEKGK  A+   +SNPIHEP  TP +PPG+ 
Sbjct: 1   MEDDRKSEQEKTRKDIEELREKLDAILLALEKGKTIAE---TSNPIHEP-PTPQFPPGFE 60

Query: 61  ------GPPLRPVAEGFMPQYTTYNPLYDVPIGQYPHTFVKGAQQIPTNIIFREPEQMMS 120
                 GP  RP+ EGFM QYTTYNPLYD+P GQ+P   V+G  Q P  IIF+EPEQ+++
Sbjct: 61  PSFRPAGPSFRPMTEGFMSQYTTYNPLYDIPAGQFPPPLVRGPPQAPAGIIFQEPEQVIA 120

Query: 121 PPTVLNLGGLPAKTDPVGQNAPSNEKLEVLEERLRAIEGTDVFGNIDASQLCLVSGLVIP 180
           PPTVLNLGG  A  DP  Q APS+EKLEVLEERLRA+EGTDVFGNIDASQLCL SGLVIP
Sbjct: 121 PPTVLNLGGPQANKDPERQEAPSSEKLEVLEERLRAVEGTDVFGNIDASQLCLXSGLVIP 180

Query: 181 PKFKVPEFEKYDGSSCPKNHLIMYCRKMAAYVQNYKLLIHCFQDSLYGPASRWYMQLDSS 240
           PKFK+PEFEKYDGSSCPKNHLIMYCRKMAAY+QN KLLIHCFQDSL GP S WYM LDS 
Sbjct: 181 PKFKIPEFEKYDGSSCPKNHLIMYCRKMAAYIQNDKLLIHCFQDSLSGPXSXWYMHLDSX 240

Query: 241 HVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKNSTESFKEYAQRWRDTAAQVQPPLTD 300
           HV SWKNLADSFLKQYKHNIDM  DRLDLQ MEK + ESFKEY QRWRDTAAQ QPP TD
Sbjct: 241 HVXSWKNLADSFLKQYKHNIDMXXDRLDLQXMEKKTXESFKEYXQRWRDTAAQXQPPXTD 300

Query: 301 KELSAMFINTLKHPFYDRMIGSASTNFSDIMTIGERIEYGVRHKRITSTADEPLAAKKAS 360
           KELS+MFINTLKHPFYDRMIGSAST+FSDI+TIGERIEYGV H RITST  E    K  +
Sbjct: 301 KELSSMFINTLKHPFYDRMIGSASTSFSDILTIGERIEYGVXHGRITSTVGESSTXKXXT 360

Query: 361 HSKKKEGEVQMVGADRHSWKQQPYSRTPRYTPYYYPTPYGYNQPFMNNATSHYSLYASQN 420
            SKKKEGEVQMVGADRH W+Q PY +T  Y PYYYP+PYGYNQP++N AT  Y+  ASQN
Sbjct: 361 SSKKKEGEVQMVGADRHVWRQPPYGKTXXYAPYYYPSPYGYNQPYVNXATFQYT--ASQN 420

Query: 421 FRPPASQNFQPRGQQHNTFYTQGQ 438
           FRPPASQ FQPRG Q NT YTQGQ
Sbjct: 421 FRPPASQGFQPRGYQQNTVYTQGQ 438

[Close]

BLAST of Moc07g06510 vs. ExPASy TrEMBL
Match: A0A6J1E2J7 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111025431 PE=4 SV=1)

HSP 1 Score: 625.5 bits (1612), Expect = 1.6e-175
Identity = 311/336 (92.56%), Postives = 314/336 (93.45%), Query Frame = 0


Query: 111 MMSPPTVLNLGGLPAKTDPVGQNAPSNEKLEVLEERLRAIEGTDVFGNIDASQLCLVSGL 170
           MMSPPTVLNLGGLPAKTD VGQNAPSNEK EVLEERLRAIEGT VFGNIDASQLCLVSGL
Sbjct: 1   MMSPPTVLNLGGLPAKTDLVGQNAPSNEKFEVLEERLRAIEGTYVFGNIDASQLCLVSGL 60

Query: 171 VIPPKFKVPEFEKYDGSSCPKNHLIMYCRKMAAYVQNYKLLIHCFQDSLYGPASRWYMQL 230
           VIPPKFKVPEFEKYDGSSCPKNHLIMYCRKMAAYVQN KLLIHCFQDSL GPASRWYMQL
Sbjct: 61  VIPPKFKVPEFEKYDGSSCPKNHLIMYCRKMAAYVQNDKLLIHCFQDSLSGPASRWYMQL 120

Query: 231 DSSHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKNSTESFKEYAQRWRDTAAQVQPP 290
           DSS+VGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEK STESFKEYAQRWRDTAAQVQPP
Sbjct: 121 DSSNVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKKSTESFKEYAQRWRDTAAQVQPP 180

Query: 291 LTDKELSAMFINTLKHPFYDRMIGSASTNFSDIMTIGERIEYGVRHKRITSTADEPLAAK 350
           LTDKELSAMFINTLKHPFYDRMIG+ASTNFSDIMTIGERIEYGVRH RITST DEPLAAK
Sbjct: 181 LTDKELSAMFINTLKHPFYDRMIGNASTNFSDIMTIGERIEYGVRHGRITSTVDEPLAAK 240

Query: 351 KASHSKKKEGEVQMVGADRHSWKQQPYSRTPRYTPYYYPTPYGYNQPFMNNATSHYSLYA 410
           KASHSKKKEGEVQMVGADRHSWKQQPYSRTPRYTPYYYPTPYGYNQPF+NNATSHYS Y 
Sbjct: 241 KASHSKKKEGEVQMVGADRHSWKQQPYSRTPRYTPYYYPTPYGYNQPFVNNATSHYSPYT 300

Query: 411 SQNFRP---------PASQNFQPRGQQHNTFYTQGQ 438
            QNFRP         PASQNFQPRGQQHNT YTQ Q
Sbjct: 301 FQNFRPPASQNFQPTPASQNFQPRGQQHNTLYTQEQ 336

[Close]

BLAST of Moc07g06510 vs. ExPASy TrEMBL
Match: A0A6J1CNY7 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111013372 PE=4 SV=1)

HSP 1 Score: 471.1 bits (1211), Expect = 5.1e-129
Identity = 235/259 (90.73%), Postives = 238/259 (91.89%), Query Frame = 0


Query: 121 GGLPAKTDPVGQNAPSNEKLEVLEERLRAIEGTDVFGNIDASQLCLVSGLVIPPKFKVPE 180
           GGLPAKTDPVGQNAPSNEK EVL+ERLRAIEGTDVFGNIDASQLCLVS LVIPPKFKVPE
Sbjct: 62  GGLPAKTDPVGQNAPSNEKFEVLKERLRAIEGTDVFGNIDASQLCLVSRLVIPPKFKVPE 121

Query: 181 FEKYDGSSCPKNHLIMYCRKMAAYVQNYKLLIHCFQDSLYGPASRWYMQLDSSHVGSWKN 240
           FEKYDGSSCPKNHLIMYCRKMAAYVQN KLLIHCFQDSL  PASRWYMQLDSSHVGSWKN
Sbjct: 122 FEKYDGSSCPKNHLIMYCRKMAAYVQNDKLLIHCFQDSLSSPASRWYMQLDSSHVGSWKN 181

Query: 241 LADSFLKQYKHNIDMAPDRLDLQRMEKNSTESFKEYAQRWRDTAAQVQPPLTDKELSAMF 300
           LADSFLKQYKHNIDMAPDRLDLQRMEK STESFKEYAQRWRDTAAQVQPPLTDKELS MF
Sbjct: 182 LADSFLKQYKHNIDMAPDRLDLQRMEKKSTESFKEYAQRWRDTAAQVQPPLTDKELSXMF 241

Query: 301 INTLKHPFYDRMIGSASTNFSDIMTIGERIEYGVRHKRITSTADEPLAAKKASHSKKKEG 360
           INTLKHPFYDRM+GSASTNFSDIM IGERIEYGVRH RITSTADEPLAAKK SHSKKKEG
Sbjct: 242 INTLKHPFYDRMVGSASTNFSDIMAIGERIEYGVRHGRITSTADEPLAAKKTSHSKKKEG 301

Query: 361 EVQMVGADRHSWKQQPYSR 380
           E+  V  D     Q PY R
Sbjct: 302 ELAHVPVDP---IQPPYPR 317

The following BLAST results are available for this feature:

BLAST of Moc07g06510 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022157796.1	4.8e-198	95.10	LOW QUALITY PROTEIN: uncharacterized protein LOC111024415 [Momordica charantia]	[more]
XP_022147189.1	7.6e-196	90.96	LOW QUALITY PROTEIN: uncharacterized protein LOC111016200 [Momordica charantia]	[more]
XP_022155098.1	2.5e-186	75.23	LOW QUALITY PROTEIN: uncharacterized protein LOC111022231, partial [Momordica ch...	[more]
XP_022158986.1	3.3e-175	92.56	LOW QUALITY PROTEIN: uncharacterized protein LOC111025431 [Momordica charantia]	[more]
XP_022143495.1	1.1e-128	90.73	LOW QUALITY PROTEIN: uncharacterized protein LOC111013372 [Momordica charantia]	[more]

BLAST of Moc07g06510 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc07g06510 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DZ90	2.3e-198	95.10	Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111024415 PE=4 SV=1	[more]
A0A6J1D099	3.7e-196	90.96	Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111016200 PE=4 SV=1	[more]
A0A6J1DM29	7.0e-187	75.45	LOW QUALITY PROTEIN: uncharacterized protein LOC111022231 OS=Momordica charantia...	[more]
A0A6J1E2J7	1.6e-175	92.56	Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111025431 PE=4 SV=1	[more]
A0A6J1CNY7	5.1e-129	90.73	Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111013372 PE=4 SV=1	[more]

BLAST of Moc07g06510 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 2..26
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 415..437
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..58
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 343..364
None	No IPR available	PANTHER	PTHR34491:SF19	GAG-PRO-LIKE PROTEIN	coord: 132..326
None	No IPR available	PANTHER	PTHR34491	A-TYPE INCLUSION PROTEIN, PUTATIVE-RELATED	coord: 132..326
IPR005162	Retrotransposon gag domain	PFAM	PF03732	Retrotrans_gag	coord: 218..305 e-value: 4.0E-12 score: 46.2

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc07g06510.1	Moc07g06510.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071897	DNA biosynthetic process
biological_process	GO:0015074	DNA integration
biological_process	GO:0006310	DNA recombination
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
cellular_component	GO:0030430	host cell cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003887	DNA-directed DNA polymerase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity