Moc07g06210 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc07g06210
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionDimer_Tnp_hAT domain-containing protein
Locationchr7: 5133357 .. 5134814 (-)
RNA-Seq ExpressionMoc07g06210
SyntenyMoc07g06210
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCAACAAGCAAGAATGGATCAAGAAACAAGGGTGGATAACCGTAGACAGGTTTTTCCCCAAGAAAGGCCAGCAGATCCACCAAGAAGACCAATGGCAGTCTGGTTGGGACCAAGAAACTTCCAAGAAACGTGCCTTTTCCCGCAAGAAGTCAATCGCAATCCTTTGTTTCAAAGGCGACGAGAGACCATGTTCGATTCTTCAAGTGACGAAGATGACGAGATCATTGCTTTTGAAGGGGAGCGTTGTGGTAGGTATCCTAACCCAAATAGGATTCAAGATCAGAACGAGTATGACATGAAGATAAAGGGAGGAGTTTCGGCTTGGTGAGACCAACTAGAAGTTAATAGGCATCGTTATGGGAAGCAACCCATCTGCAATTGGGAGCGAATGAAAAAGCTCATGCGTGAACGATTTCTACCAATTAATTTTGAACAAGTTCTGTACAAACTATACTAGAATTGTCGGCAAGGAACAAGATCTGTAGCTGACTATTCTGAGGAGTTTCGTCATTTGGGTGCAAGAACCAATATTTTGGAAAGCCAACAACATTTGGTGGCTCGATTCATTGGTGGGTTGCGTTCGGACATTAAAGAACAGATTGCTTTGCAACCAATTGGTTATCTCAATGAGGCAATTTCTACCGCAACCACCATTGAAGAGCAGGTGGGCAGTCGTTTCAAGAAGCAATATGCTCGCCGCGACACTTGGGACCAGGGGGTACATCCAAACGGTCCAATCCTCCGGGCGACAATACCTCTTCCCCAAACTCTTCAGCAACTGCCCCTAAAGGTAAGTCCCTCGATACCAAAATTGGTGTACAATACACAGGTGTTTTCTTGAAGAAAGAATAATATCCTCCAAAAGAGAAAGCCAGCAACTATTTTAAAGAGAAAGCTAGCACATTAACAGTACACTAACGGTAACTACATATTAACCACACGGTTAACCAACTTATAACTAAAACAACCTTACGGTCTTACTTAACCCAACTAACCCTTACATAATAACTACATCAGTAACTCAAGAGAGAATGAATGTCTTAAAAGATATTTGAGTATAAATGAGAGCGCACAAAAGTACACTTGGAGTTCGCCAATTTCTCTACAATGTATGTAGAGTTTGCTGGCTATGATTTTATATGTGAAAGGTACTCTATGGATCCTAAAAGTTGGTGGGTATCCATGGTGCCTATGCACCAATTTTGCAGACATTAGCTATGAACAACCTTCATCTTCCTCATGTTGTAAGCGAAATTGGAGTACATGTTCATTTATGAATTCTTTAAAGAGGAATAAGATGACACATCAATGTGCAGGAGACTTGGTGTGTATCCATAGTAATCTTGGTCTTTTATCAGGAAGAATTCCAGGATATGCAAAAGGAAATACAAAATTGTGGGATATTGTTGAGGATTCTTTTGATCCATTTGAGGATGTAGGCATGCTTAAATAG

mRNA sequence

ATGGATCAACAAGCAAGAATGGATCAAGAAACAAGGGTGGATAACCGTAGACAGGTTTTTCCCCAAGAAAGGCCAGCAGATCCACCAAGAAGACCAATGGCAGTCTGGTTGGGACCAAGAAACTTCCAAGAAACGTGCCTTTTCCCGCAAGAAGTCAATCGCAATCCTTTGTTTCAAAGGCGACGAGAGACCATGTTCGATTCTTCAAGTGACGAAGATGACGAGATCATTGCTTTTGAAGGGGAGCGTTGTGGTAGGTATCCTAACCCAAATAGGATTCAAGATCAGAACGAGTATGACATGAAGATAAAGGGAGGAGTTTCGGCTTGCCAACAACATTTGGTGGCTCGATTCATTGGTGGGTTGCGTTCGGACATTAAAGAACAGATTGCTTTGCAACCAATTGGTTATCTCAATGAGGCAATTTCTACCGCAACCACCATTGAAGAGCAGGTGGGCAGTCGTTTCAAGAAGCAATATGCTCGCCGCGACACTTGGGACCAGGGGGTACATCCAAACGGTCCAATCCTCCGGGCGACAATACCTCTTCCCCAAACTCTTCAGCAACTGCCCCTAAAGAGTTTGCTGGCTATGATTTTATATGTGAAAGGAGACTTGGTGTGTATCCATAGTAATCTTGGTCTTTTATCAGGAAGAATTCCAGGATATGCAAAAGGAAATACAAAATTGTGGGATATTGTTGAGGATTCTTTTGATCCATTTGAGGATGTAGGCATGCTTAAATAG

Coding sequence (CDS)

ATGGATCAACAAGCAAGAATGGATCAAGAAACAAGGGTGGATAACCGTAGACAGGTTTTTCCCCAAGAAAGGCCAGCAGATCCACCAAGAAGACCAATGGCAGTCTGGTTGGGACCAAGAAACTTCCAAGAAACGTGCCTTTTCCCGCAAGAAGTCAATCGCAATCCTTTGTTTCAAAGGCGACGAGAGACCATGTTCGATTCTTCAAGTGACGAAGATGACGAGATCATTGCTTTTGAAGGGGAGCGTTGTGGTAGGTATCCTAACCCAAATAGGATTCAAGATCAGAACGAGTATGACATGAAGATAAAGGGAGGAGTTTCGGCTTGCCAACAACATTTGGTGGCTCGATTCATTGGTGGGTTGCGTTCGGACATTAAAGAACAGATTGCTTTGCAACCAATTGGTTATCTCAATGAGGCAATTTCTACCGCAACCACCATTGAAGAGCAGGTGGGCAGTCGTTTCAAGAAGCAATATGCTCGCCGCGACACTTGGGACCAGGGGGTACATCCAAACGGTCCAATCCTCCGGGCGACAATACCTCTTCCCCAAACTCTTCAGCAACTGCCCCTAAAGAGTTTGCTGGCTATGATTTTATATGTGAAAGGAGACTTGGTGTGTATCCATAGTAATCTTGGTCTTTTATCAGGAAGAATTCCAGGATATGCAAAAGGAAATACAAAATTGTGGGATATTGTTGAGGATTCTTTTGATCCATTTGAGGATGTAGGCATGCTTAAATAG

Protein sequence

MDQQARMDQETRVDNRRQVFPQERPADPPRRPMAVWLGPRNFQETCLFPQEVNRNPLFQRRRETMFDSSSDEDDEIIAFEGERCGRYPNPNRIQDQNEYDMKIKGGVSACQQHLVARFIGGLRSDIKEQIALQPIGYLNEAISTATTIEEQVGSRFKKQYARRDTWDQGVHPNGPILRATIPLPQTLQQLPLKSLLAMILYVKGDLVCIHSNLGLLSGRIPGYAKGNTKLWDIVEDSFDPFEDVGMLK
Homology
[Close]
BLAST of Moc07g06210 vs. NCBI nr
Match: XP_022155185.1 (uncharacterized protein LOC111022320 [Momordica charantia])

HSP 1 Score: 67.8 bits (164), Expect = 1.5e-07
Identity = 34/57 (59.65%), Postives = 44/57 (77.19%), Query Frame = 0 

Query: 111  QQHLVARFIGGLRSDIKEQIALQPIGYLNEAISTATTIEEQVGSRFKKQYARRDTWD 168
            + + VAR IGGL +DI+E+I +Q IGYLNEAI+TA TIEEQ  +++K QY RR T D
Sbjct: 1151 EHYQVARCIGGLCNDIEERIQVQLIGYLNEAIATAVTIEEQQANKYKFQYHRRATGD 1207

[Close]
BLAST of Moc07g06210 vs. NCBI nr
Match: XP_031745523.1 (uncharacterized protein LOC116405899 [Cucumis sativus])

HSP 1 Score: 66.6 bits (161), Expect = 3.4e-07
Identity = 31/67 (46.27%), Postives = 46/67 (68.66%), Query Frame = 0 

Query: 101 MKIKGGVSACQQHLVARFIGGLRSDIKEQIALQPIGYLNEAISTATTIEEQVGSRFKKQY 160
           +  +  +S  +QH +ARF+GGLR DIKE++ LQP+ +L+EAIS A T+EE +  +  K  
Sbjct: 116 LSARTNLSENEQHQIARFVGGLRFDIKEKVKLQPLRFLSEAISLAETVEEMIALK-AKTM 175

Query: 161 ARRDTWD 168
            RR TW+
Sbjct: 176 NRRTTWE 181

[Close]
BLAST of Moc07g06210 vs. NCBI nr
Match: XP_031743026.1 (uncharacterized protein LOC116404533 [Cucumis sativus])

HSP 1 Score: 66.2 bits (160), Expect = 4.4e-07
Identity = 32/67 (47.76%), Postives = 44/67 (65.67%), Query Frame = 0 

Query: 101 MKIKGGVSACQQHLVARFIGGLRSDIKEQIALQPIGYLNEAISTATTIEEQVGSRFKKQY 160
           +  +  +S  +QH VARF+GGLR DIKE++ LQP  +L+EAIS A T+EE +  R  K  
Sbjct: 287 LSARTNLSENEQHQVARFVGGLRFDIKEKVRLQPFRFLSEAISFAETVEEMIAIR-SKNL 346

Query: 161 ARRDTWD 168
            RR  W+
Sbjct: 347 NRRSAWE 352

[Close]
BLAST of Moc07g06210 vs. NCBI nr
Match: XP_031745468.1 (uncharacterized protein LOC116405837 [Cucumis sativus] >XP_031745508.1 uncharacterized protein LOC116405854 [Cucumis sativus])

HSP 1 Score: 66.2 bits (160), Expect = 4.4e-07
Identity = 32/67 (47.76%), Postives = 44/67 (65.67%), Query Frame = 0 

Query: 101 MKIKGGVSACQQHLVARFIGGLRSDIKEQIALQPIGYLNEAISTATTIEEQVGSRFKKQY 160
           +  +  +S  +QH VARF+GGLR DIKE++ LQP  +L+EAIS A T+EE +  R  K  
Sbjct: 42  LSARTNLSENEQHQVARFVGGLRFDIKEKVRLQPFRFLSEAISFAETVEEMIAIR-SKNL 101

Query: 161 ARRDTWD 168
            RR  W+
Sbjct: 102 NRRSAWE 107

[Close]
BLAST of Moc07g06210 vs. NCBI nr
Match: XP_031741035.1 (uncharacterized protein LOC116403692 [Cucumis sativus])

HSP 1 Score: 66.2 bits (160), Expect = 4.4e-07
Identity = 32/67 (47.76%), Postives = 44/67 (65.67%), Query Frame = 0 

Query: 101 MKIKGGVSACQQHLVARFIGGLRSDIKEQIALQPIGYLNEAISTATTIEEQVGSRFKKQY 160
           +  +  +S  +QH VARF+GGLR DIKE++ LQP  +L+EAIS A T+EE +  R  K  
Sbjct: 287 LSARTNLSENEQHQVARFVGGLRFDIKEKVRLQPFRFLSEAISFAETVEEMIAIR-SKNL 346

Query: 161 ARRDTWD 168
            RR  W+
Sbjct: 347 NRRSAWE 352

[Close]
BLAST of Moc07g06210 vs. ExPASy TrEMBL
Match: A0A6J1DLQ6 (uncharacterized protein LOC111022320 OS=Momordica charantia OX=3673 GN=LOC111022320 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 7.4e-08
Identity = 34/57 (59.65%), Postives = 44/57 (77.19%), Query Frame = 0 

Query: 111  QQHLVARFIGGLRSDIKEQIALQPIGYLNEAISTATTIEEQVGSRFKKQYARRDTWD 168
            + + VAR IGGL +DI+E+I +Q IGYLNEAI+TA TIEEQ  +++K QY RR T D
Sbjct: 1151 EHYQVARCIGGLCNDIEERIQVQLIGYLNEAIATAVTIEEQQANKYKFQYHRRATGD 1207

[Close]
BLAST of Moc07g06210 vs. ExPASy TrEMBL
Match: A0A1Q3BP30 (Dimer_Tnp_hAT domain-containing protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_13277 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 3.7e-07
Identity = 29/44 (65.91%), Postives = 35/44 (79.55%), Query Frame = 0 

Query: 205 DLVCIHSNLGLLSGRIPGYAKGNTKLWDIVEDSFDPFEDVGMLK 249
           DLV IHSNLGLLS + P YA+G TK+WDI  D+FD  EDVG+L+
Sbjct: 152 DLVYIHSNLGLLSRKSPQYAQGETKMWDIGRDAFDSLEDVGVLE 195

[Close]
BLAST of Moc07g06210 vs. ExPASy TrEMBL
Match: A0A5D3DZZ2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold129G00540 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 4.8e-07
Identity = 32/70 (45.71%), Postives = 45/70 (64.29%), Query Frame = 0 

Query: 111 QQHLVARFIGGLRSDIKEQIALQPIGYLNEAISTATTIEEQVGSRFKKQYARRDTWDQGV 170
           +QHL+ARF+GGL  DIKE+I LQP  +L++AIS A T+EE +     K  +RR TW+  +
Sbjct: 5   EQHLIARFVGGLHMDIKEKIKLQPFNWLSKAISFAETVEE-INELHFKNASRRGTWESNL 64

Query: 171 HPNGPILRAT 181
           +       AT
Sbjct: 65  NKKTAAPNAT 73

[Close]
BLAST of Moc07g06210 vs. ExPASy TrEMBL
Match: A0A5B7AFB0 (Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_023134 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 8.1e-07
Identity = 28/44 (63.64%), Postives = 34/44 (77.27%), Query Frame = 0 

Query: 205 DLVCIHSNLGLLSGRIPGYAKGNTKLWDIVEDSFDPFEDVGMLK 249
           DLV +HSNL LLS R P Y +G TK+WDI  D+FD FEDVG+L+
Sbjct: 651 DLVFVHSNLRLLSRRTPQYMQGETKMWDIAGDTFDSFEDVGVLE 694

[Close]
BLAST of Moc07g06210 vs. ExPASy TrEMBL
Match: A0A5D3DIC3 (RNA-directed DNA polymerase-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G004500 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 1.8e-06
Identity = 29/57 (50.88%), Postives = 43/57 (75.44%), Query Frame = 0 

Query: 111 QQHLVARFIGGLRSDIKEQIALQPIGYLNEAISTATTIEEQVGSRFKKQYARRDTWD 168
           +QH +ARFIG LR DIKE++ LQP  +L+EAIS A T+EE + ++ K   +R++TW+
Sbjct: 52  EQHQIARFIGALRFDIKEKVKLQPFRFLSEAISLAETVEEMLTAQLKST-SRKNTWE 107

The following BLAST results are available for this feature:
BLAST of Moc07g06210 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022155185.11.5e-0759.65uncharacterized protein LOC111022320 [Momordica charantia][more]
XP_031745523.13.4e-0746.27uncharacterized protein LOC116405899 [Cucumis sativus][more]
XP_031743026.14.4e-0747.76uncharacterized protein LOC116404533 [Cucumis sativus][more]
XP_031745468.14.4e-0747.76uncharacterized protein LOC116405837 [Cucumis sativus] >XP_031745508.1 uncharact... [more]
XP_031741035.14.4e-0747.76uncharacterized protein LOC116403692 [Cucumis sativus][more]
BLAST of Moc07g06210 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc07g06210 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DLQ67.4e-0859.65uncharacterized protein LOC111022320 OS=Momordica charantia OX=3673 GN=LOC111022... [more]
A0A1Q3BP303.7e-0765.91Dimer_Tnp_hAT domain-containing protein (Fragment) OS=Cephalotus follicularis OX... [more]
A0A5D3DZZ24.8e-0745.71Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5B7AFB08.1e-0763.64Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_023134 PE=4 SV=1[more]
A0A5D3DIC31.8e-0650.88RNA-directed DNA polymerase-like protein OS=Cucumis melo var. makuwa OX=1194695 ... [more]
BLAST of Moc07g06210 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..32

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc07g06210.1Moc07g06210.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0046983 protein dimerization activity