Moc07g06060 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc07g06060
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Ty3/gypsy retrotransposon protein
Location	chr7: 5013953 .. 5015527 (+)
RNA-Seq Expression	Moc07g06060
Synteny	Moc07g06060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGGTGAAGGAGCTGGAAGCAAGGTGCGATGCTACAGAGAAGGAGATGGATGACCTGAAGGGAGTAGTCACGGTTCTGTGTGGGAAAGTAGATGAACAACAGAAGATGACCGCTAAGATCCAGATGATGCTGGAGAGCTTCATGGCCGATATTACCGGCGGAGCTGCTTCGTCGATTTCGCATTTAGGCAAGTCTTCACTGCCGAAAAGCAAGCAAACCGACGATTCCACGAGGATCATCCAGATTCACGAGGCCGGATACGATCGCAACAAATTTAAGAAGGTGGAGATGCCTATCTTCACATGTATGGATCCTAATTCTTGGCTATTTAGAGCAGAGCGTTATTTTGAAATTCACAAACTAACTAATGAGGAAAAGCATATTGTATCTGTAATAAGTTTCGATGATGTCGCGTTGGCTCGGTACCGCTACCATGAAAAGCGGAATCGGTTCACCGGTTGGGACAATTTGAGAAGCCGATTGCTGGAACGATTTCGGAAGGCGAAAGAAGGGAGGCAGAGTGTGCGAGTGTTAGCGATCAAGCAGGAGGGCTCAGTTGCAGAGTATATCGATACGTTTGAAGCTCTGTCAGCGCCGCTCCCTCATCTCTCTGATGAAGTCTTGGAGTGTGCTTTCCTAAATGGGCTCGACCCGGTGGTGCGGGCAGAAGTGTTGGCTACGGAGCCCAAAGGCCTGGACCAAATCATGAAGCGGGCCCAATTAATTGAGGGTGTTGCCACGGCGGTCCAAGAGGTAGGGGAGGGTTTATCAGAACGACAGTCGAAGATGGCAACTATGGCAGGTAAGGCGACTGCTCGACCTGGCGAATTGACTTCGACCCGAACTGTTACCCTAGCCAGTAAAACCAATACTGCCACCCCAAACGTTCCGGCACCAACAATCAGGAAAGAGGTTACCTACAAGCGACTAACGGAAGAAGAATACAAGAAGAGAAGGGAGTGCGGCCTCTGCTTCAAACGCGAAGAAAAATATACAGTCGGCCATCGATGTAAGAACCAGCAATTGAGAGTGATAGTGGTCCATAACGATGAGGAACTGGACCCGAAGGAAGAAGAGCAAAGGATCGAAAAGGAGGACTCTCCCGGAGACAAGGGAAAGGCTGTGATGTGCCACTTGAATACGATTGTGGGTTTATCAACTCCGGGTATGATCAAAATACGAGGAACTTTGCAGGGGAGAGACGTGGTAGTCCTGCTGGATTGCGGAGCTATGCACAATTTTCTTTCGCAGAAGCTGGTCAATGAATTGAACATTCCGCAGTCGGATACATTCAGCTATGGAATCATCACGAGTACTGGAACAACCGTAAAGGGCCAAGGAATCTGTAATGGGGTTGTGTTAGAACTCCCAGAGATTACGGTAGTGGAGGATTTCTTACCGATCAAATTGAATGATTCGGATGTAATCCTAGGGATGAAATGGCTGCAATCCATGGGAAAAATGGAGGCTGATTGGCCATCCTTATCCATGTCTTTTGTCCGAGGAAACAAGAGAATTACCTTGAAAGGCGATCCGACTATGAGGGCTATGTGGTGGAACTGCGAGCCATGA

mRNA sequence

ATGACGGTGAAGGAGCTGGAAGCAAGGTGCGATGCTACAGAGAAGGAGATGGATGACCTGAAGGGAGTAGTCACGGTTCTGTGTGGGAAAGTAGATGAACAACAGAAGATGACCGCTAAGATCCAGATGATGCTGGAGAGCTTCATGGCCGATATTACCGGCGGAGCTGCTTCGTCGATTTCGCATTTAGGCAAGTCTTCACTGCCGAAAAGCAAGCAAACCGACGATTCCACGAGGATCATCCAGATTCACGAGGCCGGATACGATCGCAACAAATTTAAGAAGGTGGAGATGCCTATCTTCACATGTATGGATCCTAATTCTTGGCTATTTAGAGCAGAGCGTTATTTTGAAATTCACAAACTAACTAATGAGGAAAAGCATATTGTATCTGTAATAAGTTTCGATGATGTCGCGTTGGCTCGGTACCGCTACCATGAAAAGCGGAATCGGTTCACCGGTTGGGACAATTTGAGAAGCCGATTGCTGGAACGATTTCGGAAGGCGAAAGAAGGGAGGCAGAGTGTGCGAGTGTTAGCGATCAAGCAGGAGGGCTCAGTTGCAGAGTATATCGATACGTTTGAAGCTCTGTCAGCGCCGCTCCCTCATCTCTCTGATGAAGTCTTGGAGTGTGCTTTCCTAAATGGGCTCGACCCGGTGGTGCGGGCAGAAGTGTTGGCTACGGAGCCCAAAGGCCTGGACCAAATCATGAAGCGGGCCCAATTAATTGAGGGTGTTGCCACGGCGGTCCAAGAGGTAGGGGAGGGTTTATCAGAACGACAGTCGAAGATGGCAACTATGGCAGGTAAGGCGACTGCTCGACCTGGCGAATTGACTTCGACCCGAACTGTTACCCTAGCCAGTAAAACCAATACTGCCACCCCAAACGTTCCGGCACCAACAATCAGGAAAGAGGTTACCTACAAGCGACTAACGGAAGAAGAATACAAGAAGAGAAGGGAGTGCGGCCTCTGCTTCAAACGCGAAGAAAAATATACAGTCGGCCATCGATGTAAGAACCAGCAATTGAGAGTGATAGTGGTCCATAACGATGAGGAACTGGACCCGAAGGAAGAAGAGCAAAGGATCGAAAAGGAGGACTCTCCCGGAGACAAGGGAAAGGCTGTGATGTGCCACTTGAATACGATTGTGGGTTTATCAACTCCGGGTATGATCAAAATACGAGGAACTTTGCAGGGGAGAGACGTGGTAGTCCTGCTGGATTGCGGAGCTATGCACAATTTTCTTTCGCAGAAGCTGGTCAATGAATTGAACATTCCGCAGTCGGATACATTCAGCTATGGAATCATCACGAGTACTGGAACAACCGTAAAGGGCCAAGGAATCTGTAATGGGGTTGTGTTAGAACTCCCAGAGATTACGGTAGTGGAGGATTTCTTACCGATCAAATTGAATGATTCGGATGTAATCCTAGGGATGAAATGGCTGCAATCCATGGGAAAAATGGAGGCTGATTGGCCATCCTTATCCATGTCTTTTGTCCGAGGAAACAAGAGAATTACCTTGAAAGGCGATCCGACTATGAGGGCTATGTGGTGGAACTGCGAGCCATGA

Coding sequence (CDS)

ATGACGGTGAAGGAGCTGGAAGCAAGGTGCGATGCTACAGAGAAGGAGATGGATGACCTGAAGGGAGTAGTCACGGTTCTGTGTGGGAAAGTAGATGAACAACAGAAGATGACCGCTAAGATCCAGATGATGCTGGAGAGCTTCATGGCCGATATTACCGGCGGAGCTGCTTCGTCGATTTCGCATTTAGGCAAGTCTTCACTGCCGAAAAGCAAGCAAACCGACGATTCCACGAGGATCATCCAGATTCACGAGGCCGGATACGATCGCAACAAATTTAAGAAGGTGGAGATGCCTATCTTCACATGTATGGATCCTAATTCTTGGCTATTTAGAGCAGAGCGTTATTTTGAAATTCACAAACTAACTAATGAGGAAAAGCATATTGTATCTGTAATAAGTTTCGATGATGTCGCGTTGGCTCGGTACCGCTACCATGAAAAGCGGAATCGGTTCACCGGTTGGGACAATTTGAGAAGCCGATTGCTGGAACGATTTCGGAAGGCGAAAGAAGGGAGGCAGAGTGTGCGAGTGTTAGCGATCAAGCAGGAGGGCTCAGTTGCAGAGTATATCGATACGTTTGAAGCTCTGTCAGCGCCGCTCCCTCATCTCTCTGATGAAGTCTTGGAGTGTGCTTTCCTAAATGGGCTCGACCCGGTGGTGCGGGCAGAAGTGTTGGCTACGGAGCCCAAAGGCCTGGACCAAATCATGAAGCGGGCCCAATTAATTGAGGGTGTTGCCACGGCGGTCCAAGAGGTAGGGGAGGGTTTATCAGAACGACAGTCGAAGATGGCAACTATGGCAGGTAAGGCGACTGCTCGACCTGGCGAATTGACTTCGACCCGAACTGTTACCCTAGCCAGTAAAACCAATACTGCCACCCCAAACGTTCCGGCACCAACAATCAGGAAAGAGGTTACCTACAAGCGACTAACGGAAGAAGAATACAAGAAGAGAAGGGAGTGCGGCCTCTGCTTCAAACGCGAAGAAAAATATACAGTCGGCCATCGATGTAAGAACCAGCAATTGAGAGTGATAGTGGTCCATAACGATGAGGAACTGGACCCGAAGGAAGAAGAGCAAAGGATCGAAAAGGAGGACTCTCCCGGAGACAAGGGAAAGGCTGTGATGTGCCACTTGAATACGATTGTGGGTTTATCAACTCCGGGTATGATCAAAATACGAGGAACTTTGCAGGGGAGAGACGTGGTAGTCCTGCTGGATTGCGGAGCTATGCACAATTTTCTTTCGCAGAAGCTGGTCAATGAATTGAACATTCCGCAGTCGGATACATTCAGCTATGGAATCATCACGAGTACTGGAACAACCGTAAAGGGCCAAGGAATCTGTAATGGGGTTGTGTTAGAACTCCCAGAGATTACGGTAGTGGAGGATTTCTTACCGATCAAATTGAATGATTCGGATGTAATCCTAGGGATGAAATGGCTGCAATCCATGGGAAAAATGGAGGCTGATTGGCCATCCTTATCCATGTCTTTTGTCCGAGGAAACAAGAGAATTACCTTGAAAGGCGATCCGACTATGAGGGCTATGTGGTGGAACTGCGAGCCATGA

Protein sequence

MTVKELEARCDATEKEMDDLKGVVTVLCGKVDEQQKMTAKIQMMLESFMADITGGAASSISHLGKSSLPKSKQTDDSTRIIQIHEAGYDRNKFKKVEMPIFTCMDPNSWLFRAERYFEIHKLTNEEKHIVSVISFDDVALARYRYHEKRNRFTGWDNLRSRLLERFRKAKEGRQSVRVLAIKQEGSVAEYIDTFEALSAPLPHLSDEVLECAFLNGLDPVVRAEVLATEPKGLDQIMKRAQLIEGVATAVQEVGEGLSERQSKMATMAGKATARPGELTSTRTVTLASKTNTATPNVPAPTIRKEVTYKRLTEEEYKKRRECGLCFKREEKYTVGHRCKNQQLRVIVVHNDEELDPKEEEQRIEKEDSPGDKGKAVMCHLNTIVGLSTPGMIKIRGTLQGRDVVVLLDCGAMHNFLSQKLVNELNIPQSDTFSYGIITSTGTTVKGQGICNGVVLELPEITVVEDFLPIKLNDSDVILGMKWLQSMGKMEADWPSLSMSFVRGNKRITLKGDPTMRAMWWNCEP

Homology

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BLAST of Moc07g06060 vs. NCBI nr
Match: XP_022154744.1 (uncharacterized protein LOC111021922 [Momordica charantia])

HSP 1 Score: 394.0 bits (1011), Expect = 2.0e-105
Identity = 224/535 (41.87%), Postives = 322/535 (60.19%), Query Frame = 0


Query: 4   KELEARCDATEKEMDDLKGVVTVLCGKVDEQQKMT-----------AKIQMMLESFMADI 63
           K+LE RC++TEKE+  +K V+  +  +++EQ+K +            + Q  L+ FM ++
Sbjct: 5   KQLEERCESTEKEVSGIKEVLQQISSQLEEQRKRSEAQMIEQRRKNEETQRKLDEFMLEV 64

Query: 64  TGG------AASSISHLGKSSLP-KSKQTDDSTRIIQIHEAGYDRNKFKKVEMPIFTCMD 123
           + G      AA + S   K  LP ++ +    T   +    G +RNKFKKVEMP+FT  D
Sbjct: 65  SQGKSPRPAAAENGSSALKRKLPEENSEQQGETSTGKAEGPGVERNKFKKVEMPVFTGDD 124

Query: 124 PNSWLFRAERYFEIHKLTNEEKHIVSVISFDDVALARYRYHEKRNRFTGWDNLRSRLLER 183
           PNSWLFRAERYFEI+ L+ EEK  V++ISF+  A+  Y + E R  F  W+NL++R+ ER
Sbjct: 125 PNSWLFRAERYFEINHLSEEEKMTVTIISFEGAAMKWYCWSENRQPFADWNNLKTRMFER 184

Query: 184 FRKAKEGRQSVRVLAIKQEGSVAEYIDTFEALSAPLPHLSDEVLECAFLNGLDPVVRAEV 243
           F  +K+     R L+IK+EG+V EY  TFEA SA LP ++++V+E        P      
Sbjct: 185 FSDSKDQNLLSRFLSIKKEGTVTEYRQTFEAWSASLPDIAEDVMEIHTTRDGSPSQGPRT 244

Query: 244 LATEPKGLDQIMKRAQLIEGVATAVQEVGEGLSERQSKMATMAGKATARPGELTSTRTVT 303
           LA  P                                       K   +  E  +TRTVT
Sbjct: 245 LANTP---------------------------------------KTPPKTSETVTTRTVT 304

Query: 304 LASKT-NTATPNVPAPTIRKEVTYKRLTEEEYKKRRECGLCFKREEKYTVGHRCKNQQLR 363
           L+ K+  TA P      +RKE T K+LTE EY++R++ GLCF+ EEKY++GHRCKNQ+L+
Sbjct: 305 LSGKSYPTAQP------LRKEQTQKKLTETEYQRRKDKGLCFRSEEKYSIGHRCKNQELK 364

Query: 364 VIVVHNDEELDPKEEEQRIEKEDSPGDKGKAVM-CHLNTIVGLSTPGMIKIRGTLQGRDV 423
           V VVH+DE ++  +EE  +  E       + V    LNT+VG STPG +K+RG ++ ++V
Sbjct: 365 VFVVHDDEGMELDQEELIMSTEGRETTIVEEVAELALNTVVGFSTPGTMKLRGLIEDKEV 424

Query: 424 VVLLDCGAMHNFLSQKLVNELNIPQSDTFSYGIITSTGTTVKGQGICNGVVLELPEITVV 483
           V+L+DCGA HNF+SQKLV+  N+P  +T +YG+I  TG  V+G+GIC G++L LPE+T+ 
Sbjct: 425 VILIDCGATHNFISQKLVDAFNLPLHETSNYGVIMGTGVVVRGKGICKGIILYLPELTIR 484

Query: 484 EDFLPIKLNDSDVILGMKWLQSMGKMEADWPSLSMSFVRGNKRITLKGDPTMRAM 519
           E+FLP++L + DV+LGM+WL + G ME DW +L+MSF  G+ RI LKGDPT+  M
Sbjct: 485 ENFLPLELGNLDVVLGMQWLSTQGTMEVDWQALTMSFRNGSNRIILKGDPTLMRM 494

[Close]

BLAST of Moc07g06060 vs. NCBI nr
Match: XP_022131713.1 (uncharacterized protein LOC111004816 [Momordica charantia])

HSP 1 Score: 374.8 bits (961), Expect = 1.2e-99
Identity = 207/333 (62.16%), Postives = 254/333 (76.28%), Query Frame = 0


Query: 179 LAIKQEGSVAEYIDTFEALSAPLPHLSDEVLECAFLNGLDPVVRAEVLATEPKGLDQIMK 238
           +AIKQEGSV EY + FEALSA  PHL +EVLE  +LNGL+P++RAEVLA++P GLDQIM+
Sbjct: 1   MAIKQEGSVEEYQEAFEALSATQPHLVEEVLESDYLNGLNPILRAEVLASKPTGLDQIMR 60

Query: 239 RAQLIEGVATAVQEVGEGLSERQSKMATMAGKATARPGELTSTRTVTLASKTNTA-TPNV 298
           RAQLIE  AT  QE GE   ER SK      K   +  E T+TR+VTLASK  TA T   
Sbjct: 61  RAQLIEDQATTSQENGEVNQERPSKGGMGGVKLAIKTPETTATRSVTLASKPGTAVTAPA 120

Query: 299 PAPTIRKEVTYKRLTEEEYKKRRECGLCFKREEKYTVGHRCKNQQLRVIVVHNDEELDPK 358
             PT++KE  YKRLTEEEY+KR E GLCF+ E+KY+VGHRC+NQQLRV +VH DEEL   
Sbjct: 121 VVPTVKKETAYKRLTEEEYRKRWENGLCFRCEKKYSVGHRCRNQQLRVFMVH-DEELTMT 180

Query: 359 EEEQRIEKEDSPGDKGKAVMCHLNTIVGLSTPGMIKIRGTLQGRDVVVLLDCGAMHNFLS 418
           EEE+  E+ ++  +KGKAV+  LNT+VGL+T GMIKI+G LQG+ VVVLLDCGA HNF+S
Sbjct: 181 EEEEDHEEGETLDEKGKAVV--LNTVVGLTTLGMIKIKGILQGQGVVVLLDCGAAHNFIS 240

Query: 419 QKLVNELNIPQSDTFSYGIITSTGTTVKGQGICNGVVLELPEITVVEDFLPIKLNDSDVI 478
            +LV E  IPQS+T++YGII  T   VKG+GIC GVV+EL  +TVVEDFL I+LND DVI
Sbjct: 241 NRLVKEFKIPQSETYNYGIIAGTRPAVKGKGICCGVVMELLGVTVVEDFLLIELNDLDVI 300

Query: 479 LGMKWLQSMGKMEADWPSLSMSFVRGNKRITLK 511
           LGMK LQ+MGKME DWP+L+++F RG K + L+
Sbjct: 301 LGMKCLQAMGKMEIDWPALTITFTRGTKGLCLR 330

[Close]

BLAST of Moc07g06060 vs. NCBI nr
Match: TYK23724.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 363.6 bits (932), Expect = 2.8e-96
Identity = 211/537 (39.29%), Postives = 316/537 (58.85%), Query Frame = 0


Query: 1   MTVKELEARCDATEKEMDDLKGVVTVLCGKVDEQQKMTAKIQMMLESFMADITGGAASSI 60
           MT K +E R DA+EKE++ +K  V     ++   +K   K+  ML     D      SS 
Sbjct: 1   MTQKLIEERLDASEKEIEAIKKEVQ----RIPVLEKTMEKMHAMLTEMYEDRQRQPGSS- 60

Query: 61  SHLGKSSLPKSKQTDD--------STRIIQIHEAGYDRNKFKKVEMPIFTCMDPNSWLFR 120
              G S+  +  +T+D         T +     AG DR KFKK+EMP+F   DP+ W++R
Sbjct: 61  ELTGVSTGKRKMRTEDVVDGDEEGETSLSLEPGAGQDRIKFKKLEMPVFNGEDPDGWIYR 120

Query: 121 AERYFEIHKLTNEEKHIVSVISFDDVALARYRYHEKRNRFTGWDNLRSRLLERFRKAKEG 180
           AE YF++H L  +EK  ++++S +   L  +R+ E R RF  W  L+ RL  RFR  + G
Sbjct: 121 AEHYFQMHLLNEQEKLKIAIVSMEGKGLCWFRWAENRKRFRSWKELKERLYNRFRNREYG 180

Query: 181 RQSVRVLAIKQEGSVAEYIDTFEALSAPLPHLSDEVLECAFLNGLDPVVRAEVLATEPKG 240
               R LAIKQEGSV EY+  FE LSAPLP ++++VL  AF NGLDPV+R EV A    G
Sbjct: 181 TGCARFLAIKQEGSVGEYLQRFEELSAPLPEMAEDVLVGAFTNGLDPVIRTEVFAMRAVG 240

Query: 241 LDQIMKRAQLIEGVATAVQEVGEGLSERQSKMATMAGKATARPGELTSTRTVTLA----- 300
           L+ +M  A+L E       E+        +K    A K   +  E  ST+ VTLA     
Sbjct: 241 LEDMMDAARLAE----EKLEIARASHGPYAKDFKSAQKPAPKNVETPSTKIVTLAERIPA 300

Query: 301 --SKTNTATPNVPAPTIRKEVTYKRLTEEEYKKRRECGLCFKREEKYTVGHRCKNQQLRV 360
             ++ N +         R++  ++R T+ E + RR+ GLC++ EE ++ GHRCKN++LR+
Sbjct: 301 SVNQANNSQNGATGMGGRRDTGFRRWTDSELQARRDKGLCYRCEEPFSKGHRCKNKELRL 360

Query: 361 IVVHND----EELDPKEEEQRIEKEDSPGDKGKAVMCHLNTIVGLSTPGMIKIRGTLQGR 420
            VV +D    E +D   E + +E   SP      V   LN++VGL+ PG  K++GT++ +
Sbjct: 361 CVVADDLEDVEMVDSAYEGEMVEV--SP-----VVELSLNSVVGLTAPGTFKLKGTVENQ 420

Query: 421 DVVVLLDCGAMHNFLSQKLVNELNIPQSDTFSYGIITSTGTTVKGQGICNGVVLELPEIT 480
           ++V+++DCGA HNF+S KLV  L +P ++T +YG+I  +G  V+G+GIC G+ + LP I+
Sbjct: 421 EIVIMVDCGATHNFISLKLVENLKLPMAETTNYGVIMGSGKAVQGRGICKGITVGLPVIS 480

Query: 481 VVEDFLPIKLNDSDVILGMKWLQSMGKMEADWPSLSMSFVRGNKRITLKGDPTMRAM 519
           +VEDFLP++L + D++LGM+WLQ  G M  DW +L+M+FV G+ ++ LKGDP++  M
Sbjct: 481 IVEDFLPLELGNIDMVLGMQWLQKQGAMTVDWKALTMTFVVGDTKVILKGDPSLTRM 521

[Close]

BLAST of Moc07g06060 vs. NCBI nr
Match: TYK21209.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 363.2 bits (931), Expect = 3.7e-96
Identity = 211/537 (39.29%), Postives = 316/537 (58.85%), Query Frame = 0


Query: 1   MTVKELEARCDATEKEMDDLKGVVTVLCGKVDEQQKMTAKIQMMLESFMADITGGAASSI 60
           MT K +E R DA+EKE++ +K  V     ++   +K   K+  ML     D      SS 
Sbjct: 1   MTQKLIEERLDASEKEIEAIKKEVQ----RIPVLEKTMEKMHAMLTEMYEDRQRQPGSS- 60

Query: 61  SHLGKSSLPKSKQTDD--------STRIIQIHEAGYDRNKFKKVEMPIFTCMDPNSWLFR 120
              G S+  +  +T+D         T +     AG DR KFKK+EMP+F   DP+ W++R
Sbjct: 61  ELTGVSTGKRKMRTEDVVDGDEEGETSLSLEPGAGQDRIKFKKLEMPVFNGEDPDGWIYR 120

Query: 121 AERYFEIHKLTNEEKHIVSVISFDDVALARYRYHEKRNRFTGWDNLRSRLLERFRKAKEG 180
           AE YF++H L  +EK  ++++S +   L  +R+ E R RF  W  L+ RL  RFR  + G
Sbjct: 121 AEHYFQMHLLNEQEKLKIAIVSMEGKGLCWFRWAENRKRFRSWKELKERLYTRFRNREYG 180

Query: 181 RQSVRVLAIKQEGSVAEYIDTFEALSAPLPHLSDEVLECAFLNGLDPVVRAEVLATEPKG 240
               R LAIKQEGSV EY+  FE LSAPLP ++++VL  AF NGLDPV+R EV A    G
Sbjct: 181 TGCARFLAIKQEGSVGEYLQRFEELSAPLPEMAEDVLVGAFTNGLDPVIRTEVFAMRAVG 240

Query: 241 LDQIMKRAQLIEGVATAVQEVGEGLSERQSKMATMAGKATARPGELTSTRTVTLA----- 300
           L+ +M  A+L E       E+        +K    A K   +  E  ST+ VTLA     
Sbjct: 241 LEDMMDAARLAE----EKLEIARASHGPYAKDFKSAQKPAPKNVETPSTKIVTLAERIPA 300

Query: 301 --SKTNTATPNVPAPTIRKEVTYKRLTEEEYKKRRECGLCFKREEKYTVGHRCKNQQLRV 360
             ++ N +         R++  ++R T+ E + RR+ GLC++ EE ++ GHRCKN++LR+
Sbjct: 301 SVNQANNSQNGATGMGGRRDTGFRRWTDSELQARRDKGLCYRCEEPFSKGHRCKNKELRL 360

Query: 361 IVVHND----EELDPKEEEQRIEKEDSPGDKGKAVMCHLNTIVGLSTPGMIKIRGTLQGR 420
            VV +D    E +D   E + +E   SP      V   LN++VGL+ PG  K++GT++ +
Sbjct: 361 CVVADDLEDVEMVDSAYEGEMVEV--SP-----VVELSLNSVVGLTAPGTFKLKGTVENQ 420

Query: 421 DVVVLLDCGAMHNFLSQKLVNELNIPQSDTFSYGIITSTGTTVKGQGICNGVVLELPEIT 480
           ++V+++DCGA HNF+S KLV  L +P ++T +YG+I  +G  V+G+GIC G+ + LP I+
Sbjct: 421 EIVIMVDCGATHNFISLKLVENLKLPMAETTNYGVIMGSGKAVQGRGICKGITVGLPVIS 480

Query: 481 VVEDFLPIKLNDSDVILGMKWLQSMGKMEADWPSLSMSFVRGNKRITLKGDPTMRAM 519
           +VEDFLP++L + D++LGM+WLQ  G M  DW +L+M+FV G+ ++ LKGDP++  M
Sbjct: 481 IVEDFLPLELGNIDMVLGMQWLQKQGAMTVDWKALTMTFVVGDTKVILKGDPSLTRM 521

[Close]

BLAST of Moc07g06060 vs. NCBI nr
Match: TYK10423.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 363.2 bits (931), Expect = 3.7e-96
Identity = 211/537 (39.29%), Postives = 316/537 (58.85%), Query Frame = 0


Query: 1   MTVKELEARCDATEKEMDDLKGVVTVLCGKVDEQQKMTAKIQMMLESFMADITGGAASSI 60
           MT K +E R DA+EKE++ +K  V     ++   +K   K+  ML     D      SS 
Sbjct: 1   MTQKLIEERLDASEKEIEAIKKEVQ----RIPVLEKTMEKMHAMLTEMYEDRQRQPGSS- 60

Query: 61  SHLGKSSLPKSKQTDD--------STRIIQIHEAGYDRNKFKKVEMPIFTCMDPNSWLFR 120
              G S+  +  +T+D         T +     AG DR KFKK+EMP+F   DP+ W++R
Sbjct: 61  ELTGVSTGKRKMRTEDVVDGDEEGETSLSLEPGAGQDRIKFKKLEMPVFNGEDPDGWIYR 120

Query: 121 AERYFEIHKLTNEEKHIVSVISFDDVALARYRYHEKRNRFTGWDNLRSRLLERFRKAKEG 180
           AE YF++H L  +EK  ++++S +   L  +R+ E R RF  W  L+ RL  RFR  + G
Sbjct: 121 AEHYFQMHLLNEQEKLKIAIVSMEGKGLCWFRWAENRKRFRSWKELKERLYTRFRNREYG 180

Query: 181 RQSVRVLAIKQEGSVAEYIDTFEALSAPLPHLSDEVLECAFLNGLDPVVRAEVLATEPKG 240
               R LAIKQEGSV EY+  FE LSAPLP ++++VL  AF NGLDPV+R EV A    G
Sbjct: 181 TGCARFLAIKQEGSVGEYLQRFEELSAPLPEMAEDVLVGAFTNGLDPVIRTEVFAMRAVG 240

Query: 241 LDQIMKRAQLIEGVATAVQEVGEGLSERQSKMATMAGKATARPGELTSTRTVTLA----- 300
           L+ +M  A+L E       E+        +K    A K   +  E  ST+ VTLA     
Sbjct: 241 LEDMMDAARLAE----EKLEIARASHGPYAKDFKSAQKPAPKNVETPSTKIVTLAERIPA 300

Query: 301 --SKTNTATPNVPAPTIRKEVTYKRLTEEEYKKRRECGLCFKREEKYTVGHRCKNQQLRV 360
             ++ N +         R++  ++R T+ E + RR+ GLC++ EE ++ GHRCKN++LR+
Sbjct: 301 SVNQANNSQNGATGMGGRRDTGFRRWTDSELQARRDKGLCYRCEEPFSKGHRCKNKELRL 360

Query: 361 IVVHND----EELDPKEEEQRIEKEDSPGDKGKAVMCHLNTIVGLSTPGMIKIRGTLQGR 420
            VV +D    E +D   E + +E   SP      V   LN++VGL+ PG  K++GT++ +
Sbjct: 361 CVVADDLEDVEMVDSAYEGEMVEV--SP-----VVELSLNSVVGLTAPGTFKLKGTVENQ 420

Query: 421 DVVVLLDCGAMHNFLSQKLVNELNIPQSDTFSYGIITSTGTTVKGQGICNGVVLELPEIT 480
           ++V+++DCGA HNF+S KLV  L +P ++T +YG+I  +G  V+G+GIC G+ + LP I+
Sbjct: 421 EIVIMVDCGATHNFISLKLVENLKLPMAETTNYGVIMGSGKAVQGRGICKGITVGLPVIS 480

Query: 481 VVEDFLPIKLNDSDVILGMKWLQSMGKMEADWPSLSMSFVRGNKRITLKGDPTMRAM 519
           +VEDFLP++L + D++LGM+WLQ  G M  DW +L+M+FV G+ ++ LKGDP++  M
Sbjct: 481 IVEDFLPLELGNIDMVLGMQWLQKQGAMTVDWKALTMTFVVGDTKVILKGDPSLTRM 521

[Close]

BLAST of Moc07g06060 vs. ExPASy TrEMBL
Match: A0A6J1DN22 (Reverse transcriptase OS=Momordica charantia OX=3673 GN=LOC111021922 PE=4 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 9.5e-106
Identity = 224/535 (41.87%), Postives = 322/535 (60.19%), Query Frame = 0


Query: 4   KELEARCDATEKEMDDLKGVVTVLCGKVDEQQKMT-----------AKIQMMLESFMADI 63
           K+LE RC++TEKE+  +K V+  +  +++EQ+K +            + Q  L+ FM ++
Sbjct: 5   KQLEERCESTEKEVSGIKEVLQQISSQLEEQRKRSEAQMIEQRRKNEETQRKLDEFMLEV 64

Query: 64  TGG------AASSISHLGKSSLP-KSKQTDDSTRIIQIHEAGYDRNKFKKVEMPIFTCMD 123
           + G      AA + S   K  LP ++ +    T   +    G +RNKFKKVEMP+FT  D
Sbjct: 65  SQGKSPRPAAAENGSSALKRKLPEENSEQQGETSTGKAEGPGVERNKFKKVEMPVFTGDD 124

Query: 124 PNSWLFRAERYFEIHKLTNEEKHIVSVISFDDVALARYRYHEKRNRFTGWDNLRSRLLER 183
           PNSWLFRAERYFEI+ L+ EEK  V++ISF+  A+  Y + E R  F  W+NL++R+ ER
Sbjct: 125 PNSWLFRAERYFEINHLSEEEKMTVTIISFEGAAMKWYCWSENRQPFADWNNLKTRMFER 184

Query: 184 FRKAKEGRQSVRVLAIKQEGSVAEYIDTFEALSAPLPHLSDEVLECAFLNGLDPVVRAEV 243
           F  +K+     R L+IK+EG+V EY  TFEA SA LP ++++V+E        P      
Sbjct: 185 FSDSKDQNLLSRFLSIKKEGTVTEYRQTFEAWSASLPDIAEDVMEIHTTRDGSPSQGPRT 244

Query: 244 LATEPKGLDQIMKRAQLIEGVATAVQEVGEGLSERQSKMATMAGKATARPGELTSTRTVT 303
           LA  P                                       K   +  E  +TRTVT
Sbjct: 245 LANTP---------------------------------------KTPPKTSETVTTRTVT 304

Query: 304 LASKT-NTATPNVPAPTIRKEVTYKRLTEEEYKKRRECGLCFKREEKYTVGHRCKNQQLR 363
           L+ K+  TA P      +RKE T K+LTE EY++R++ GLCF+ EEKY++GHRCKNQ+L+
Sbjct: 305 LSGKSYPTAQP------LRKEQTQKKLTETEYQRRKDKGLCFRSEEKYSIGHRCKNQELK 364

Query: 364 VIVVHNDEELDPKEEEQRIEKEDSPGDKGKAVM-CHLNTIVGLSTPGMIKIRGTLQGRDV 423
           V VVH+DE ++  +EE  +  E       + V    LNT+VG STPG +K+RG ++ ++V
Sbjct: 365 VFVVHDDEGMELDQEELIMSTEGRETTIVEEVAELALNTVVGFSTPGTMKLRGLIEDKEV 424

Query: 424 VVLLDCGAMHNFLSQKLVNELNIPQSDTFSYGIITSTGTTVKGQGICNGVVLELPEITVV 483
           V+L+DCGA HNF+SQKLV+  N+P  +T +YG+I  TG  V+G+GIC G++L LPE+T+ 
Sbjct: 425 VILIDCGATHNFISQKLVDAFNLPLHETSNYGVIMGTGVVVRGKGICKGIILYLPELTIR 484

Query: 484 EDFLPIKLNDSDVILGMKWLQSMGKMEADWPSLSMSFVRGNKRITLKGDPTMRAM 519
           E+FLP++L + DV+LGM+WL + G ME DW +L+MSF  G+ RI LKGDPT+  M
Sbjct: 485 ENFLPLELGNLDVVLGMQWLSTQGTMEVDWQALTMSFRNGSNRIILKGDPTLMRM 494

[Close]

BLAST of Moc07g06060 vs. ExPASy TrEMBL
Match: A0A6J1BU87 (uncharacterized protein LOC111004816 OS=Momordica charantia OX=3673 GN=LOC111004816 PE=4 SV=1)

HSP 1 Score: 374.8 bits (961), Expect = 5.9e-100
Identity = 207/333 (62.16%), Postives = 254/333 (76.28%), Query Frame = 0


Query: 179 LAIKQEGSVAEYIDTFEALSAPLPHLSDEVLECAFLNGLDPVVRAEVLATEPKGLDQIMK 238
           +AIKQEGSV EY + FEALSA  PHL +EVLE  +LNGL+P++RAEVLA++P GLDQIM+
Sbjct: 1   MAIKQEGSVEEYQEAFEALSATQPHLVEEVLESDYLNGLNPILRAEVLASKPTGLDQIMR 60

Query: 239 RAQLIEGVATAVQEVGEGLSERQSKMATMAGKATARPGELTSTRTVTLASKTNTA-TPNV 298
           RAQLIE  AT  QE GE   ER SK      K   +  E T+TR+VTLASK  TA T   
Sbjct: 61  RAQLIEDQATTSQENGEVNQERPSKGGMGGVKLAIKTPETTATRSVTLASKPGTAVTAPA 120

Query: 299 PAPTIRKEVTYKRLTEEEYKKRRECGLCFKREEKYTVGHRCKNQQLRVIVVHNDEELDPK 358
             PT++KE  YKRLTEEEY+KR E GLCF+ E+KY+VGHRC+NQQLRV +VH DEEL   
Sbjct: 121 VVPTVKKETAYKRLTEEEYRKRWENGLCFRCEKKYSVGHRCRNQQLRVFMVH-DEELTMT 180

Query: 359 EEEQRIEKEDSPGDKGKAVMCHLNTIVGLSTPGMIKIRGTLQGRDVVVLLDCGAMHNFLS 418
           EEE+  E+ ++  +KGKAV+  LNT+VGL+T GMIKI+G LQG+ VVVLLDCGA HNF+S
Sbjct: 181 EEEEDHEEGETLDEKGKAVV--LNTVVGLTTLGMIKIKGILQGQGVVVLLDCGAAHNFIS 240

Query: 419 QKLVNELNIPQSDTFSYGIITSTGTTVKGQGICNGVVLELPEITVVEDFLPIKLNDSDVI 478
            +LV E  IPQS+T++YGII  T   VKG+GIC GVV+EL  +TVVEDFL I+LND DVI
Sbjct: 241 NRLVKEFKIPQSETYNYGIIAGTRPAVKGKGICCGVVMELLGVTVVEDFLLIELNDLDVI 300

Query: 479 LGMKWLQSMGKMEADWPSLSMSFVRGNKRITLK 511
           LGMK LQ+MGKME DWP+L+++F RG K + L+
Sbjct: 301 LGMKCLQAMGKMEIDWPALTITFTRGTKGLCLR 330

[Close]

BLAST of Moc07g06060 vs. ExPASy TrEMBL
Match: A0A5D3DJA9 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1607G00370 PE=4 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 1.4e-96
Identity = 211/537 (39.29%), Postives = 316/537 (58.85%), Query Frame = 0


Query: 1   MTVKELEARCDATEKEMDDLKGVVTVLCGKVDEQQKMTAKIQMMLESFMADITGGAASSI 60
           MT K +E R DA+EKE++ +K  V     ++   +K   K+  ML     D      SS 
Sbjct: 1   MTQKLIEERLDASEKEIEAIKKEVQ----RIPVLEKTMEKMHAMLTEMYEDRQRQPGSS- 60

Query: 61  SHLGKSSLPKSKQTDD--------STRIIQIHEAGYDRNKFKKVEMPIFTCMDPNSWLFR 120
              G S+  +  +T+D         T +     AG DR KFKK+EMP+F   DP+ W++R
Sbjct: 61  ELTGVSTGKRKMRTEDVVDGDEEGETSLSLEPGAGQDRIKFKKLEMPVFNGEDPDGWIYR 120

Query: 121 AERYFEIHKLTNEEKHIVSVISFDDVALARYRYHEKRNRFTGWDNLRSRLLERFRKAKEG 180
           AE YF++H L  +EK  ++++S +   L  +R+ E R RF  W  L+ RL  RFR  + G
Sbjct: 121 AEHYFQMHLLNEQEKLKIAIVSMEGKGLCWFRWAENRKRFRSWKELKERLYNRFRNREYG 180

Query: 181 RQSVRVLAIKQEGSVAEYIDTFEALSAPLPHLSDEVLECAFLNGLDPVVRAEVLATEPKG 240
               R LAIKQEGSV EY+  FE LSAPLP ++++VL  AF NGLDPV+R EV A    G
Sbjct: 181 TGCARFLAIKQEGSVGEYLQRFEELSAPLPEMAEDVLVGAFTNGLDPVIRTEVFAMRAVG 240

Query: 241 LDQIMKRAQLIEGVATAVQEVGEGLSERQSKMATMAGKATARPGELTSTRTVTLA----- 300
           L+ +M  A+L E       E+        +K    A K   +  E  ST+ VTLA     
Sbjct: 241 LEDMMDAARLAE----EKLEIARASHGPYAKDFKSAQKPAPKNVETPSTKIVTLAERIPA 300

Query: 301 --SKTNTATPNVPAPTIRKEVTYKRLTEEEYKKRRECGLCFKREEKYTVGHRCKNQQLRV 360
             ++ N +         R++  ++R T+ E + RR+ GLC++ EE ++ GHRCKN++LR+
Sbjct: 301 SVNQANNSQNGATGMGGRRDTGFRRWTDSELQARRDKGLCYRCEEPFSKGHRCKNKELRL 360

Query: 361 IVVHND----EELDPKEEEQRIEKEDSPGDKGKAVMCHLNTIVGLSTPGMIKIRGTLQGR 420
            VV +D    E +D   E + +E   SP      V   LN++VGL+ PG  K++GT++ +
Sbjct: 361 CVVADDLEDVEMVDSAYEGEMVEV--SP-----VVELSLNSVVGLTAPGTFKLKGTVENQ 420

Query: 421 DVVVLLDCGAMHNFLSQKLVNELNIPQSDTFSYGIITSTGTTVKGQGICNGVVLELPEIT 480
           ++V+++DCGA HNF+S KLV  L +P ++T +YG+I  +G  V+G+GIC G+ + LP I+
Sbjct: 421 EIVIMVDCGATHNFISLKLVENLKLPMAETTNYGVIMGSGKAVQGRGICKGITVGLPVIS 480

Query: 481 VVEDFLPIKLNDSDVILGMKWLQSMGKMEADWPSLSMSFVRGNKRITLKGDPTMRAM 519
           +VEDFLP++L + D++LGM+WLQ  G M  DW +L+M+FV G+ ++ LKGDP++  M
Sbjct: 481 IVEDFLPLELGNIDMVLGMQWLQKQGAMTVDWKALTMTFVVGDTKVILKGDPSLTRM 521

[Close]

BLAST of Moc07g06060 vs. ExPASy TrEMBL
Match: A0A5D3CEX8 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G00690 PE=4 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 1.8e-96
Identity = 211/537 (39.29%), Postives = 316/537 (58.85%), Query Frame = 0


Query: 1   MTVKELEARCDATEKEMDDLKGVVTVLCGKVDEQQKMTAKIQMMLESFMADITGGAASSI 60
           MT K +E R DA+EKE++ +K  V     ++   +K   K+  ML     D      SS 
Sbjct: 1   MTQKLIEERLDASEKEIEAIKKEVQ----RIPVLEKTMEKMHAMLTEMYEDRQRQPGSS- 60

Query: 61  SHLGKSSLPKSKQTDD--------STRIIQIHEAGYDRNKFKKVEMPIFTCMDPNSWLFR 120
              G S+  +  +T+D         T +     AG DR KFKK+EMP+F   DP+ W++R
Sbjct: 61  ELTGVSTGKRKMRTEDVVDGDEEGETSLSLEPGAGQDRIKFKKLEMPVFNGEDPDGWIYR 120

Query: 121 AERYFEIHKLTNEEKHIVSVISFDDVALARYRYHEKRNRFTGWDNLRSRLLERFRKAKEG 180
           AE YF++H L  +EK  ++++S +   L  +R+ E R RF  W  L+ RL  RFR  + G
Sbjct: 121 AEHYFQMHLLNEQEKLKIAIVSMEGKGLCWFRWAENRKRFRSWKELKERLYTRFRNREYG 180

Query: 181 RQSVRVLAIKQEGSVAEYIDTFEALSAPLPHLSDEVLECAFLNGLDPVVRAEVLATEPKG 240
               R LAIKQEGSV EY+  FE LSAPLP ++++VL  AF NGLDPV+R EV A    G
Sbjct: 181 TGCARFLAIKQEGSVGEYLQRFEELSAPLPEMAEDVLVGAFTNGLDPVIRTEVFAMRAVG 240

Query: 241 LDQIMKRAQLIEGVATAVQEVGEGLSERQSKMATMAGKATARPGELTSTRTVTLA----- 300
           L+ +M  A+L E       E+        +K    A K   +  E  ST+ VTLA     
Sbjct: 241 LEDMMDAARLAE----EKLEIARASHGPYAKDFKSAQKPAPKNVETPSTKIVTLAERIPA 300

Query: 301 --SKTNTATPNVPAPTIRKEVTYKRLTEEEYKKRRECGLCFKREEKYTVGHRCKNQQLRV 360
             ++ N +         R++  ++R T+ E + RR+ GLC++ EE ++ GHRCKN++LR+
Sbjct: 301 SVNQANNSQNGATGMGGRRDTGFRRWTDSELQARRDKGLCYRCEEPFSKGHRCKNKELRL 360

Query: 361 IVVHND----EELDPKEEEQRIEKEDSPGDKGKAVMCHLNTIVGLSTPGMIKIRGTLQGR 420
            VV +D    E +D   E + +E   SP      V   LN++VGL+ PG  K++GT++ +
Sbjct: 361 CVVADDLEDVEMVDSAYEGEMVEV--SP-----VVELSLNSVVGLTAPGTFKLKGTVENQ 420

Query: 421 DVVVLLDCGAMHNFLSQKLVNELNIPQSDTFSYGIITSTGTTVKGQGICNGVVLELPEIT 480
           ++V+++DCGA HNF+S KLV  L +P ++T +YG+I  +G  V+G+GIC G+ + LP I+
Sbjct: 421 EIVIMVDCGATHNFISLKLVENLKLPMAETTNYGVIMGSGKAVQGRGICKGITVGLPVIS 480

Query: 481 VVEDFLPIKLNDSDVILGMKWLQSMGKMEADWPSLSMSFVRGNKRITLKGDPTMRAM 519
           +VEDFLP++L + D++LGM+WLQ  G M  DW +L+M+FV G+ ++ LKGDP++  M
Sbjct: 481 IVEDFLPLELGNIDMVLGMQWLQKQGAMTVDWKALTMTFVVGDTKVILKGDPSLTRM 521

[Close]

BLAST of Moc07g06060 vs. ExPASy TrEMBL
Match: A0A5D3DRT3 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00710 PE=4 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 1.8e-96
Identity = 211/537 (39.29%), Postives = 316/537 (58.85%), Query Frame = 0


Query: 1   MTVKELEARCDATEKEMDDLKGVVTVLCGKVDEQQKMTAKIQMMLESFMADITGGAASSI 60
           MT K +E R DA+EKE++ +K  V     ++   +K   K+  ML     D      SS 
Sbjct: 1   MTQKLIEERLDASEKEIEAIKKEVQ----RIPVLEKTMEKMHAMLTEMYEDRQRQPGSS- 60

Query: 61  SHLGKSSLPKSKQTDD--------STRIIQIHEAGYDRNKFKKVEMPIFTCMDPNSWLFR 120
              G S+  +  +T+D         T +     AG DR KFKK+EMP+F   DP+ W++R
Sbjct: 61  ELTGVSTGKRKMRTEDVVDGDEEGETSLSLEPGAGQDRIKFKKLEMPVFNGEDPDGWIYR 120

Query: 121 AERYFEIHKLTNEEKHIVSVISFDDVALARYRYHEKRNRFTGWDNLRSRLLERFRKAKEG 180
           AE YF++H L  +EK  ++++S +   L  +R+ E R RF  W  L+ RL  RFR  + G
Sbjct: 121 AEHYFQMHLLNEQEKLKIAIVSMEGKGLCWFRWAENRKRFRSWKELKERLYTRFRNREYG 180

Query: 181 RQSVRVLAIKQEGSVAEYIDTFEALSAPLPHLSDEVLECAFLNGLDPVVRAEVLATEPKG 240
               R LAIKQEGSV EY+  FE LSAPLP ++++VL  AF NGLDPV+R EV A    G
Sbjct: 181 TGCARFLAIKQEGSVGEYLQRFEELSAPLPEMAEDVLVGAFTNGLDPVIRTEVFAMRAVG 240

Query: 241 LDQIMKRAQLIEGVATAVQEVGEGLSERQSKMATMAGKATARPGELTSTRTVTLA----- 300
           L+ +M  A+L E       E+        +K    A K   +  E  ST+ VTLA     
Sbjct: 241 LEDMMDAARLAE----EKLEIARASHGPYAKDFKSAQKPAPKNVETPSTKIVTLAERIPA 300

Query: 301 --SKTNTATPNVPAPTIRKEVTYKRLTEEEYKKRRECGLCFKREEKYTVGHRCKNQQLRV 360
             ++ N +         R++  ++R T+ E + RR+ GLC++ EE ++ GHRCKN++LR+
Sbjct: 301 SVNQANNSQNGATGMGGRRDTGFRRWTDSELQARRDKGLCYRCEEPFSKGHRCKNKELRL 360

Query: 361 IVVHND----EELDPKEEEQRIEKEDSPGDKGKAVMCHLNTIVGLSTPGMIKIRGTLQGR 420
            VV +D    E +D   E + +E   SP      V   LN++VGL+ PG  K++GT++ +
Sbjct: 361 CVVADDLEDVEMVDSAYEGEMVEV--SP-----VVELSLNSVVGLTAPGTFKLKGTVENQ 420

Query: 421 DVVVLLDCGAMHNFLSQKLVNELNIPQSDTFSYGIITSTGTTVKGQGICNGVVLELPEIT 480
           ++V+++DCGA HNF+S KLV  L +P ++T +YG+I  +G  V+G+GIC G+ + LP I+
Sbjct: 421 EIVIMVDCGATHNFISLKLVENLKLPMAETTNYGVIMGSGKAVQGRGICKGITVGLPVIS 480

Query: 481 VVEDFLPIKLNDSDVILGMKWLQSMGKMEADWPSLSMSFVRGNKRITLKGDPTMRAM 519
           +VEDFLP++L + D++LGM+WLQ  G M  DW +L+M+FV G+ ++ LKGDP++  M
Sbjct: 481 IVEDFLPLELGNIDMVLGMQWLQKQGAMTVDWKALTMTFVVGDTKVILKGDPSLTRM 521

[Close]

BLAST of Moc07g06060 vs. TAIR 10
Match: AT3G29750.1 (Eukaryotic aspartyl protease family protein )

HSP 1 Score: 70.9 bits (172), Expect = 3.5e-12
Identity = 39/129 (30.23%), Postives = 65/129 (50.39%), Query Frame = 0


Query: 383 IVGLSTPGMIKIRGTLQGRDVVVLLDCGAMHNFLSQKLVNELNIPQSDTFSYGIITSTGT 442
           ++ L+    ++  G +    VVV +D GA  NF+  +L   L +P S T    ++     
Sbjct: 115 VIDLTRNKGMRFYGFILDHKVVVAIDSGATDNFILVELAFSLKLPTSITNQASVLLGQRQ 174

Query: 443 TVKGQGICNGVVLELPEITVVEDFLPIKL--NDSDVILGMKWLQSMGKMEADWPSLSMSF 502
            ++  G C G+ L + E+ + E+FL + L   D DVILG +WL  +G+   +W +   SF
Sbjct: 175 CIQSVGTCLGIRLWVQEVEITENFLLLDLAKTDVDVILGYEWLSKLGETMVNWQNQDFSF 234

Query: 503 VRGNKRITL 510
               + ITL
Sbjct: 235 SHNQQWITL 243

HSP 2 Score: 40.4 bits (93), Expect = 5.1e-03
Identity = 22/59 (37.29%), Postives = 31/59 (52.54%), Query Frame = 0


Query: 181 IKQEGSVAEYIDTFEALSAPLPHLSDEVLECAFLNGLDPVVRAEVLATEPKGLDQIMKR 240
           I+QEGSV +Y + FEAL      L  +  E  FL GL P ++  V   +P G++    R
Sbjct: 12  IQQEGSVRDYRERFEALCLRSVTLPGQGFEEMFLQGLQPSLQTAVRELKPNGINSYQSR 70

[Close]

BLAST of Moc07g06060 vs. TAIR 10
Match: AT3G30770.1 (Eukaryotic aspartyl protease family protein )

HSP 1 Score: 60.8 bits (146), Expect = 3.7e-09
Identity = 36/120 (30.00%), Postives = 61/120 (50.83%), Query Frame = 0


Query: 392 IKIRGTLQGRDVVVLLDCGAMHNFLSQKLVNELNIPQSDTFSYGIITSTGTTVKGQGICN 451
           ++  G +    VVV++D GA +NF+S +L   L +P S T    ++      ++  G C 
Sbjct: 284 MRFYGFISCHKVVVVIDSGATNNFISDELALVLKLPTSTTNQASVLLGQRQCIQTIGTCF 343

Query: 452 GVVLELPEITVVEDFLPIKL--NDSDVILGMKWLQSMGKMEADWPSLSMSFVRGNKRITL 510
           G+ L + E+ + E+FL + L   D DVILG    Q++ +    W +   SF    + +TL
Sbjct: 344 GINLLVQEVEINENFLLLDLTKTDVDVILGYGGSQNLERQWLIWLNQDFSFFHNQQWVTL 403

[Close]

BLAST of Moc07g06060 vs. TAIR 10
Match: AT3G42723.1 (aminoacyl-tRNA ligases;ATP binding;nucleotide binding )

HSP 1 Score: 56.6 bits (135), Expect = 6.9e-08
Identity = 40/145 (27.59%), Postives = 66/145 (45.52%), Query Frame = 0


Query: 114 ERYFEIHKLTNEEKHIVSVISFDDVALARYRYHEKRNRFTGWDNLRSRLLERFRKAKEGR 173
           E YF  + +  +E+  +   + +       ++  K+N  T W   +  +    +   +  
Sbjct: 279 ENYFGENNIPEQERLQIVYSNLEGDIGQWIKHLWKKNSPTSWKEFKCMMARETKTTMKVN 338

Query: 174 QSVRVLAIKQEGSVAEYIDTFEALSAPLPHLSDEVLECAFLNGLDPVVRAEVLATEPKGL 233
                  I+QEGSV EY + FEAL      L  + LE  FL GL P ++  V   +P G+
Sbjct: 339 HQPHYSGIQQEGSVREYRERFEALCLGSVILPGQGLEALFLQGLQPSLQTAVRELKPNGI 398

Query: 234 DQIMKRAQLIEGVATAVQEVGEGLS 259
            Q+M  AQ +E  + ++   G GLS
Sbjct: 399 VQMMDTAQWLE-ESNSLMVYGSGLS 422

[Close]

BLAST of Moc07g06060 vs. TAIR 10
Match: AT1G53705.1 (aminoacyl-tRNA ligases;nucleotide binding;ATP binding )

HSP 1 Score: 47.0 bits (110), Expect = 5.5e-05
Identity = 22/50 (44.00%), Postives = 33/50 (66.00%), Query Frame = 0


Query: 441 GTTVKGQGICNGVVLELPEITVVEDFLPIKLN--DSDVILGMKWLQSMGK 489
           G  ++ +G C G+ L + E  +VED+L + LN  D+DVILG KWL  +G+
Sbjct: 4   GQHIESKGSCLGISLWIQEAAIVEDYLLLDLNKTDADVILGYKWLSKLGE 53

[Close]

BLAST of Moc07g06060 vs. TAIR 10
Match: AT1G53705.2 (aminoacyl-tRNA ligases;nucleotide binding;ATP binding )

HSP 1 Score: 47.0 bits (110), Expect = 5.5e-05
Identity = 22/50 (44.00%), Postives = 33/50 (66.00%), Query Frame = 0


Query: 441 GTTVKGQGICNGVVLELPEITVVEDFLPIKLN--DSDVILGMKWLQSMGK 489
           G  ++ +G C G+ L + E  +VED+L + LN  D+DVILG KWL  +G+
Sbjct: 4   GQHIESKGSCLGISLWIQEAAIVEDYLLLDLNKTDADVILGYKWLSKLGE 53

The following BLAST results are available for this feature:

BLAST of Moc07g06060 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022154744.1	2.0e-105	41.87	uncharacterized protein LOC111021922 [Momordica charantia]	[more]
XP_022131713.1	1.2e-99	62.16	uncharacterized protein LOC111004816 [Momordica charantia]	[more]
TYK23724.1	2.8e-96	39.29	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK21209.1	3.7e-96	39.29	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK10423.1	3.7e-96	39.29	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]

BLAST of Moc07g06060 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc07g06060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DN22	9.5e-106	41.87	Reverse transcriptase OS=Momordica charantia OX=3673 GN=LOC111021922 PE=4 SV=1	[more]
A0A6J1BU87	5.9e-100	62.16	uncharacterized protein LOC111004816 OS=Momordica charantia OX=3673 GN=LOC111004...	[more]
A0A5D3DJA9	1.4e-96	39.29	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5D3CEX8	1.8e-96	39.29	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5D3DRT3	1.8e-96	39.29	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]

BLAST of Moc07g06060 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G29750.1	3.5e-12	30.23	Eukaryotic aspartyl protease family protein	[more]
AT3G30770.1	3.7e-09	30.00	Eukaryotic aspartyl protease family protein	[more]
AT3G42723.1	6.9e-08	27.59	aminoacyl-tRNA ligases;ATP binding;nucleotide binding	[more]
AT1G53705.1	5.5e-05	44.00	aminoacyl-tRNA ligases;nucleotide binding;ATP binding	[more]
AT1G53705.2	5.5e-05	44.00	aminoacyl-tRNA ligases;nucleotide binding;ATP binding	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 3..23
None	No IPR available	PFAM	PF08284	RVP_2	coord: 398..486 e-value: 1.4E-12 score: 47.6
None	No IPR available	PANTHER	PTHR34482	DNA DAMAGE-INDUCIBLE PROTEIN 1-LIKE	coord: 76..511
None	No IPR available	PANTHER	PTHR34482:SF20	SUBFAMILY NOT NAMED	coord: 76..511
None	No IPR available	CDD	cd00303	retropepsin_like	coord: 394..484 e-value: 4.63748E-17 score: 74.2952
IPR005162	Retrotransposon gag domain	PFAM	PF03732	Retrotrans_gag	coord: 132..218 e-value: 1.0E-9 score: 38.5
IPR021109	Aspartic peptidase domain superfamily	GENE3D	2.40.70.10	Acid Proteases	coord: 375..509 e-value: 4.2E-17 score: 64.1
IPR021109	Aspartic peptidase domain superfamily	SUPERFAMILY	50630	Acid proteases	coord: 387..487

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc07g06060.1	Moc07g06060.1	mRNA