Moc07g05940 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc07g05940
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	caffeic acid 3-O-methyltransferase-like
Location	chr7: 4944460 .. 4946499 (+)
RNA-Seq Expression	Moc07g05940
Synteny	Moc07g05940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTAGCTCGTCTAGCGATTCGTTATCTGGGTCGTCCAGCTCGTCTAGTACAGACAACTCTCTAGAGGGACCGAACTTAGCTTCTATCTTGGGGAACCCTTGCGTCGAGGATAGCTCGGCAAACCCCAATGTAGCCTCCACCTCAGGAAACCCTAACCTTGGTCCGGTAGTCAAGCTTCCTCCCTCGACTTGCTCGGTAGGTAGATTAGCCGAGCTCCGCAAAACCTACTTAACCCCAACCATAGAGCTTAGGGTGCCCAACGTTGGCGAGTCTCTTGACGACCCTTCTCTGGGCTTCGTCAGCTTCTACCCCCAGATGTTTAGTATGGGGGTTAGGCCTCCACTTCACCCTTTCATCCAGAGGTTTCTTAGCGCAATCAACCTCGCCCCAGCTTAGCTCTCTCCCAATGGGTGGTCTACTGTGCTCGATGCTTACGTGATGTGGTGGATCATCCGGGATGAGGACGAGGATAGGTTGACAGTAGACCAGCTTCTCGCCACCCACACAGTCAAAGCCTCTAACGAGGGGGAGGGTAGGTTTTACCTCTCAGCTCGGAGAAATGTAGGTCAGCTTATTAGGAATCCCCTTCTAACAAGAATTGGAAGGAGTGTTGGTTCCTCGTCTCCGGCTATTGGCTCGTGAAAAATGAAGAGGGTGAGCCGATCTGCCACGTTCCTGTAGAGTTCGGAGACATAGGTGAGTGTCTTAGGTGTGATCTAGGTTGTTTTTTACTCTCACGCCTTTGTTTCTGACGAGGTTTTATGGTGCAGCTCTGCCATCCCCGTTCCGAGGATCAACAACAAGTCTTGGGACATCATCAAGCGAGCCCAAGGTCGAAGCCTAAAGTCCGCGCTGTGGGGTGAAACACTCGTCTTAAACTCCCACCTCTTCTCCAGCGGCCTCAACCCTCACGACCAACCAGACGAGTTCAAGAAGCTCCCCAAACCTCGGCAACGTAGCTCACAAAAAAGGAAAGCTCCGGAAGGTAATCTGTCCTTGGCACTTTAGCTCGTTTAAATGTAATCTCTCGACTAACCTCGTCTTCTTTGTAGGGATGGCCTCCAAGTTCCATGCACTCAGCAGTACGAAACGGCAGCAGCCTCGGCCTCGGCTGCCCCACCGGCGCCTCCTCAAGCTCGTCGTCGAACAAACAGTGCTGATGTTCCGGCTCTCGGGCTGACTAACTTGGCCAAGGAAAATACTCCTCAAGCCCTTGCAGACCGTTGTCGGGGGCAAGGAGTCGGTTACCCCTCTGCAGCGGAAGAAGCGGGGGAGGAAAATGCTTCCCTCCGAGGAGGTCAACTCCAGATATCCACCTCCCTCCATCGTTGTCGACTCGGAGGAAGGGTCGCAACATGGTTGGCGGCATTACGGCGAGCTCCCACTCCCATTCAGGCTCGCCTTCTCGCGCCTCAGCATCCACGAGGCCTCGACGAAAGTGAGGTCCTCGAGCTCTCACCTGGTGGAACGAGCTATCCAGGCGTCCGAGGACCCTACGGAGGCTGTGAGGAGGACTATAGCTCTTGCTGTCGAGGTGAGCTCGTGTGCACTCTTCCCTTCTTTTTCTCCTTTATGTCCTTTAATCTAACCTCGTGCTTTCGCAGCTGCACTATCATGCCTGCCTCTCGGCATGGATGATGAGCTTGGAGCTTGGAGCTCGGATGATGGGACTTAAAGGAGGAGGAGACGAACGCCTTCTACAAGTGGAGGATCGCTGAGCTTGAAGCTGAAGTTGACCAGGCTCGAGCTGAGAAGGAAGCTGAGGCCGATAGGTCGAAGGCCTTGATAGCCCAAGCTCGCACTGACTTGAAGAATGCCCAGGGCCGAGCTGAGACTGCGGAGAAGAGCTGGAATGAGGCTCAGCAGAATTTAGCGAGCTGGGCCTACTTGGAGAAGAAGGTCAAAGAATTCCTCGAGTTCGATGGCCTAGCTCGCGACCTGGCGAACAAGGGCTTTTACTATGCTATCAACCGGCTCGACACTACTTGCTCCGAGGAAGCCATTGCCGCTGTCGAGCTGGAATATGAGTCTATCTAG

mRNA sequence

ATGAGTAGCTCGTCTAGCGATTCGTTATCTGGGTCGTCCAGCTCGTCTAGTACAGACAACTCTCTAGAGGGACCGAACTTAGCTTCTATCTTGGGGAACCCTTGCGTCGAGGATAGCTCGGCAAACCCCAATGTAGCCTCCACCTCAGGAAACCCTAACCTTGGTCCGGTAGTCAAGCTTCCTCCCTCGACTTGCTCGGTAGGTAGATTAGCCGAGCTCCGCAAAACCTACTTAACCCCAACCATAGAGCTTAGGGTGCCCAACGTTGGCGAGTCTCTTGACGACCCTTCTCTGGGCTTCGTCAGCTTCTACCCCCAGATGTTTAGTATGGGGGTTAGGCCTCCACTTCACCCTTTCATCCAGAGCTCTGCCATCCCCGTTCCGAGGATCAACAACAAGTCTTGGGACATCATCAAGCGAGCCCAAGGTCGAAGCCTAAAGTCCGCGCTGTGGGGTGAAACACTCGTCTTAAACTCCCACCTCTTCTCCAGCGGCCTCAACCCTCACGACCAACCAGACGAGTTCAAGAAGCTCCCCAAACCTCGGCAACGTAGCTCACAAAAAAGGAAAGCTCCGGAAGTTCCATGCACTCAGCAGTACGAAACGGCAGCAGCCTCGGCCTCGGCTGCCCCACCGGCGCCTCCTCAAGCTCGTCGTCGAACAAACAGTGCTGATGTTCCGGCTCTCGGGCTGACTAACTTGGCCAAGGAAAATACTCCTCAAGCCCTTGCAGACCGTTGTCGGGGGCAAGGAGTCGGTTACCCCTCTGCAGCGGAAGAAGCGGGGGAGGAAAATGCTTCCCTCCGAGGAGGTCAACTCCAGATATCCACCTCCCTCCATCGTTGTCGACTCGGAGGAAGGGTCGCAACATGGTTGGCGGCATTACGGCGAGCTCCCACTCCCATTCAGGCTCGCCTTCTCGCGCCTCAGCATCCACGAGGCCTCGACGAAAGTGAGGTCCTCGAGCTCTCACCTGGTGGAACGAGCTATCCAGGCGTCCGAGGACCCTACGGAGGCTGTGAGGAGGACTATAGCTCTTGCTGTCGAGCCCAAGCTCGCACTGACTTGAAGAATGCCCAGGGCCGAGCTGAGACTGCGGAGAAGAGCTGGAATGAGGCTCAGCAGAATTTAGCGAGCTGGGCCTACTTGGAGAAGAAGGTCAAAGAATTCCTCGAGTTCGATGGCCTAGCTCGCGACCTGGCGAACAAGGGCTTTTACTATGCTATCAACCGGCTCGACACTACTTGCTCCGAGGAAGCCATTGCCGCTGTCGAGCTGGAATATGAGTCTATCTAG

Coding sequence (CDS)

ATGAGTAGCTCGTCTAGCGATTCGTTATCTGGGTCGTCCAGCTCGTCTAGTACAGACAACTCTCTAGAGGGACCGAACTTAGCTTCTATCTTGGGGAACCCTTGCGTCGAGGATAGCTCGGCAAACCCCAATGTAGCCTCCACCTCAGGAAACCCTAACCTTGGTCCGGTAGTCAAGCTTCCTCCCTCGACTTGCTCGGTAGGTAGATTAGCCGAGCTCCGCAAAACCTACTTAACCCCAACCATAGAGCTTAGGGTGCCCAACGTTGGCGAGTCTCTTGACGACCCTTCTCTGGGCTTCGTCAGCTTCTACCCCCAGATGTTTAGTATGGGGGTTAGGCCTCCACTTCACCCTTTCATCCAGAGCTCTGCCATCCCCGTTCCGAGGATCAACAACAAGTCTTGGGACATCATCAAGCGAGCCCAAGGTCGAAGCCTAAAGTCCGCGCTGTGGGGTGAAACACTCGTCTTAAACTCCCACCTCTTCTCCAGCGGCCTCAACCCTCACGACCAACCAGACGAGTTCAAGAAGCTCCCCAAACCTCGGCAACGTAGCTCACAAAAAAGGAAAGCTCCGGAAGTTCCATGCACTCAGCAGTACGAAACGGCAGCAGCCTCGGCCTCGGCTGCCCCACCGGCGCCTCCTCAAGCTCGTCGTCGAACAAACAGTGCTGATGTTCCGGCTCTCGGGCTGACTAACTTGGCCAAGGAAAATACTCCTCAAGCCCTTGCAGACCGTTGTCGGGGGCAAGGAGTCGGTTACCCCTCTGCAGCGGAAGAAGCGGGGGAGGAAAATGCTTCCCTCCGAGGAGGTCAACTCCAGATATCCACCTCCCTCCATCGTTGTCGACTCGGAGGAAGGGTCGCAACATGGTTGGCGGCATTACGGCGAGCTCCCACTCCCATTCAGGCTCGCCTTCTCGCGCCTCAGCATCCACGAGGCCTCGACGAAAGTGAGGTCCTCGAGCTCTCACCTGGTGGAACGAGCTATCCAGGCGTCCGAGGACCCTACGGAGGCTGTGAGGAGGACTATAGCTCTTGCTGTCGAGCCCAAGCTCGCACTGACTTGAAGAATGCCCAGGGCCGAGCTGAGACTGCGGAGAAGAGCTGGAATGAGGCTCAGCAGAATTTAGCGAGCTGGGCCTACTTGGAGAAGAAGGTCAAAGAATTCCTCGAGTTCGATGGCCTAGCTCGCGACCTGGCGAACAAGGGCTTTTACTATGCTATCAACCGGCTCGACACTACTTGCTCCGAGGAAGCCATTGCCGCTGTCGAGCTGGAATATGAGTCTATCTAG

Protein sequence

MSSSSSDSLSGSSSSSSTDNSLEGPNLASILGNPCVEDSSANPNVASTSGNPNLGPVVKLPPSTCSVGRLAELRKTYLTPTIELRVPNVGESLDDPSLGFVSFYPQMFSMGVRPPLHPFIQSSAIPVPRINNKSWDIIKRAQGRSLKSALWGETLVLNSHLFSSGLNPHDQPDEFKKLPKPRQRSSQKRKAPEVPCTQQYETAAASASAAPPAPPQARRRTNSADVPALGLTNLAKENTPQALADRCRGQGVGYPSAAEEAGEENASLRGGQLQISTSLHRCRLGGRVATWLAALRRAPTPIQARLLAPQHPRGLDESEVLELSPGGTSYPGVRGPYGGCEEDYSSCCRAQARTDLKNAQGRAETAEKSWNEAQQNLASWAYLEKKVKEFLEFDGLARDLANKGFYYAINRLDTTCSEEAIAAVELEYESI

Homology

[Close]

BLAST of Moc07g05940 vs. NCBI nr
Match: XP_022154107.1 (caffeic acid 3-O-methyltransferase-like [Momordica charantia])

HSP 1 Score: 125.2 bits (313), Expect = 1.4e-24
Identity = 68/97 (70.10%), Postives = 76/97 (78.35%), Query Frame = 0


Query: 124 AIPVPRINNKSWDIIKRAQGRSLKSALWGETLVLNSHLFSSGLNPHDQPDEFKKLPKPRQ 183
           AIPV RI+NKSW+II+RAQGRSLK ALWGE LVLNSHLFSSGL+ HDQPDEFKKLPKPRQ
Sbjct: 141 AIPVSRIDNKSWEIIRRAQGRSLKYALWGEALVLNSHLFSSGLSSHDQPDEFKKLPKPRQ 200

Query: 184 RSSQKRKAPEVPCTQ-----QYETAAASASAAPPAPP 216
            SSQKRKAPE   ++       +   ASA + PPA P
Sbjct: 201 HSSQKRKAPEEMASKFLALSSTKRQRASAPSIPPATP 237

[Close]

BLAST of Moc07g05940 vs. ExPASy TrEMBL
Match: A0A6J1DKS4 (caffeic acid 3-O-methyltransferase-like OS=Momordica charantia OX=3673 GN=LOC111021443 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 6.8e-25
Identity = 68/97 (70.10%), Postives = 76/97 (78.35%), Query Frame = 0


Query: 124 AIPVPRINNKSWDIIKRAQGRSLKSALWGETLVLNSHLFSSGLNPHDQPDEFKKLPKPRQ 183
           AIPV RI+NKSW+II+RAQGRSLK ALWGE LVLNSHLFSSGL+ HDQPDEFKKLPKPRQ
Sbjct: 141 AIPVSRIDNKSWEIIRRAQGRSLKYALWGEALVLNSHLFSSGLSSHDQPDEFKKLPKPRQ 200

Query: 184 RSSQKRKAPEVPCTQ-----QYETAAASASAAPPAPP 216
            SSQKRKAPE   ++       +   ASA + PPA P
Sbjct: 201 HSSQKRKAPEEMASKFLALSSTKRQRASAPSIPPATP 237

The following BLAST results are available for this feature:

BLAST of Moc07g05940 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022154107.1	1.4e-24	70.10	caffeic acid 3-O-methyltransferase-like [Momordica charantia]	[more]

BLAST of Moc07g05940 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc07g05940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DKS4	6.8e-25	70.10	caffeic acid 3-O-methyltransferase-like OS=Momordica charantia OX=3673 GN=LOC111...	[more]

BLAST of Moc07g05940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 349..376
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 166..222
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..34
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..54
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 170..189
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..58
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 234..269

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc07g05940.1	Moc07g05940.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0016740	transferase activity