Moc07g05630 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc07g05630
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	chr7: 4689811 .. 4694220 (+)
RNA-Seq Expression	Moc07g05630
Synteny	Moc07g05630

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGCAAGCTGGAGAATAGTAGAATGAAGATTATAAAGGGAGCAATGGTGAAAATTAAAGGAGTGTTGAGTAATGGTCTGTACATTTTAGGTAGTATAGTAGTAGGTTATCTAACAGTGGCTTCCTTTCATGATCAACAGCTTATAAAGTTATGGCATGCTCGGTTAGGACATGTCAGTGAAAGAGGTTTAAAGAAACTTCACAAGTAAGGGCTGTTGGGAAAACAATCAATTGGCACCTTAGAAATGTGTGAACATTACATTTATGGGAAAACAACAAGAGTATCCTTTGGAACTGGACAACATCATTCAAAGGCTATTCTTGACTATGCCCATGCTGATTTGTGGGGCCCGGAAAGAATACCAACTATGGGTGGATCTAGGTACTTTCTTTCGATTATAGATGACTATTCTAGAAGGGTTTGGACATACCTGTTAAAATCGAAAGATGAAACCTTCAAGAGGTTTGTTGAATGGAAAACTTTGGTGGAAAACGAAATGGGACGCAAGTTGAAATGCCTAAGAACTGACAATGGCCTTGAATTCTTGAAAAATGAGTTCAAGGATTACTGTGCAAAGTATGGAATTCAAAGACATCTCGCTGTTAGAGGAACTTCTCAACAAAATGGGGAAACTTTCAACAAATAGTGAGATGTTTAATTTCAAATGCAAACTTACCGAAGAAATTTTTTTGGGGAAACTTTGATGATAGCCACATATTTGATAAATAGGAGTCCATCAACTGTGATTGGCTTTACAACTCCTATAGAAAAGTGGTATGGACATCCACCTAATCTTAGCAATCTCAAAATCTTTGAATGTGTTGCTTTCACTCATGTGAGGGTAAACTTGATCACAGGGCAAAGAAGTGTTTGTTCTTGAGTTATCCAAATGGAGTTAAAGTTTTCAAACTATGGTGTGTTGAAAAAGGGGAAGAAAGATGTATTATCAGTCGAAATGTGGTATTTGATGAAAATAAAATGGCAATGGAAATTTTATCTCACCAAACAGAGAAAAATTAACCTTTAAAATGGAATTGGACTCACTTCATTCAGAAATGAAATATGGTATAGTGAAGACGCCTACTAACCACGAGCAAGAACAATTGGACTCACTTCAAAAATTAACCATGGCTGGAATGGATGAATTTAGTGGCAGCTGAGCTAATGTTTGCAGTAAATTTTCTTGGTTGACCTTCCTCAACTGAGTTCACTGCTGCTCACCTAGATGATGACTAAGATCATTAGTCTCTAGCTCTATTTCCTCATACGGATATTTACAATATTACCCCTTAGTGGGTTTATGCCAGCTGTAAGAGTTAAGTATTCTGATCAAAATTGGTCATCCATATCAATAATGGAAGCTCCACCCACGAAGTCTGGATCCTTCTAATGGGAAGCATGTAAAGTCTGTCTCTTATTGTAAACCTTAGATTTTAAGGCTAAAATCAGAGGGAATAAAATGGTGAGGTTCCTTTGCAAAATGGGTGTGGTAATTTGAGGGAGTGAGAGCAAGGTGGAGTTTAAAAATTCTCATAGTGCTTTTATCAAATCCATTAGTTGATAAGTCTGTGATAGGCTTTGGGTTGTCTAAAAGGATTAGGGTTGAGCCAATTGCTCTGTATCATCAATTTGTTCGAGAAGATAGTGAAAAAGGGGGTCTCAAAGTAGATGTAGATCAATTAAGATTGAACCACTATAATCACTGGTGTTATCTTCTTCTTTCCCTTCTCTATTTTAGCTTAATTACTTGTGTTGATTGATTTACAGTATTTCATTAGAGTTCTATGTTTTTGTTGAATAACTCTAATCTTATTGCTCGGTTTTATGCCATTTTTGTTTGTGCTGATCAGATTTTTACAACAGGAAACGGTACTTGATAGTAATCTTATTGATTACCTAACTATCAACACATATATGCAAGTTCCATCCTTTATAGGTGTTAGGAGAGCGGGAACAACACAATGACTAAGGCTCGGCTGAATGTGTTCTTTATTGAGTAGCTCATGTATTTGATCATGAAGTTGTTGGAATTAATTTAATTGATTCCATTAAATGGGTAACAATTTATGATAAATTAAATGTACTACTATTCATGGGAAAAATAAGTGGTCTAATTAGGGTCCATAAACTTCCTATATGTGGTGTGGCCCGCTAGGCAGATACCAGCCCGTTGATCCTAGGGGATTATGGGAAACCCTAGAATCAACTTATAAATACAGGGTTATGGTCCCCAATATACTATGCTTCTTTAGTCTTCTATTCTCCATCCAATAGAGTGTATTGCCCATCTTTGGTCTAAGGTCGCATAGTTGAGGAAGACCCAAACCACGCTGATATTGCTACAGGAACTTGGAATCTCTACTCATGGATTCAGGTAATTCGAAATAACTTATAGTTCTTTAGCCTACTCCCATGCATAGATCTTATATAAAGTTTTTTGTTTTCTAACAAGTGGTATCAGAGCCTGATTTTCATGGTTGTTTGCTAAATTATTTGATTGTTGTTTATGAATAAATTTGTTGGTTTTCCATATAGTCAAGTTTATTATTAAACAGCATGAATTATTAGAACTATTTGGATTGATTAGTTATTGGACAATTTTGAATAATTTAATTTGAAAGTCATCTGAATTTATTGATTTGATGAAGTTTGATATATTTATTCTCCCCAATATTTTCCAAATCGATCGAATTATAATCAATTCAGTTACTGTTTAAAAAAAAAAAAATCAAAGATGGCTGTGAAGGTTCAATTTAATAAAGAAAGAAATTTTTTTTTTAGAATGGCAACTGGGTTTGATTCAATTAGAAAGGGAGAAAGAAAGAAAGAAAAAAAAAAAAAGATTGCGGCGGCACTCCAGTGCCGCCATGAGGCTGCTGTGCTAGGGTGAAACCCTAGCACAAATATTTACATTATTATTTTTTTTTCCCACCTTTTTTCTTTTTCTTTTTCTTGACTTATTTTTATAAATATTCTTTATATTTATAGTCTGTAATAAATTTTTGGGCATAAAAGTATAGAGGACAATATTTTTTATTACTTTTTTATTGTGCTAATTAAAGATTGACTATTACGGTGAATAAATTTATATTTAATTTATTGGTAGCACAATTTGTCTAATTTCGTTAAATGTTTTGATGCGTGAAATATGCTACCAAAGTAGTCTCTATTTTATAAATTGGAACATTTAAAGTTCTTAGATGTAGTGTATTTCTTGCTTATGAGGATTGTGATCGGCCTAAAGGAAGATTGCAATTTGGGCAGACAACAAATACACATGCAATAATAAATATGGATAACATAAGGTTGCGTCCTTGAAGTTGTTAGTCGGCCCAAAGGAAGGCTATCATCTAAAAGGAATGAGTTATTAATGTTTTATTATTGTACTGAGAGTATCACTAGCAAATTAACATTTTTTTGTCCAAAGACTGAATGTAAATGTTGCATTAGGTATCTCACTTGTCCTCATAAAGTTTATTTAGAATGTCATGAATATTTATATATATCTGTGTGACATTACTTACTATATTGAGCTTGTGTTCTTTATACAGTTAAGGTTGCTAATTCTGATAATATGTCCACTCAAGTCAACAACATTCCTAGACTGAATGGGGCTAATTTTAAGGACTGGAAAGAAGACATCCAGATAGTACTTGGGTGTATGGATTTAGATCTTGCATTAACGGTAGACCGTCCTACTTCAACTAAGGAAAATCCTAATAAGGTTGAAATTGAGAAGTGGGATAGGTCTAATCGCATGTGTCTAATGATCATGAAGCGTTCAATTCCAGAAACATTTAGAGGCTCTATTGTTGAGGGAACGAATGCCAAAGGCTTTCTAAAGGAAATAGAGCAGTACTTTACCAAAAACGATAAGGCAGAGGCGAGTACCCTTATGGCAAAACTCACCTCTTGAAGATACGTTGGTAAAGGAAACATAAGGGAATACATAATGCAAATCTCAAATGTTGCAACAAAACGTAAGGCACTGAAGTTGGAAGTTTCTGAAGACTTTTTAGTGCACTTAGTTTTGAATTCTCTTCCAGCAGAGTATAGCCACTTCAGGGTGCGTTACAACACTCAGAAGGATAAATGGTCCCTGAATGAGCTAATCTCTCACTGTGTTCAAGAGGAAGAGAGGATGCAGCGAGAGAAGACAGAAAGTGTTCACATGGCTTCTACCTCAAAGAGTGTAAAGAGAAAGAGAGTGAATAATGCTGCGGAATCTTCTAAGCAGAAAAAGGAAAAGAAACAGGATTCAGGACCTGCTTGTTTCTTCTGTAAGAAGACTGGGCACATGAAAAAACAATGTGCCAAATATACTGCATGGCTATTGAAGAAGGGTATGTTTCTCTCCCTTGTTTGTTCTGAGATTAATCTAGCTTTTGTACCTATGCATACGTGGTAG

mRNA sequence

ATGTGCAAGCTGGAGAATAGTAGAATGAAGATTATAAAGGGAGCAATGGTGAAAATTAAAGGAGTGTTGAGTAATGGTCTGTACATTTTAGTTAAGGTTGCTAATTCTGATAATATGTCCACTCAAGTCAACAACATTCCTAGACTGAATGGGGCTAATTTTAAGGACTGGAAAGAAGACATCCAGATAGTACTTGGGTGTATGGATTTAGATCTTGCATTAACGGTAGACCGTCCTACTTCAACTAAGGAAAATCCTAATAAGGTTGAAATTGAGAAGTGGGATAGGTCTAATCGCATGTGTCTAATGATCATGAAGCGTTCAATTCCAGAAACATTTAGAGGCTCTATTGTTGAGGGAACGAATGCCAAAGGCTTTCTAAAGGAAATAGAGCAGTACTTTACCAAAAACGATAAGGCAGAGGCGACAGAGTATAGCCACTTCAGGGTGCGTTACAACACTCAGAAGGATAAATGGTCCCTGAATGAGCTAATCTCTCACTGTGTTCAAGAGGAAGAGAGGATGCAGCGAGAGAAGACAGAAAGTGTTCACATGGCTTCTACCTCAAAGAGTGTAAAGAGAAAGAGAGTGAATAATGCTGCGGAATCTTCTAAGCAGAAAAAGGAAAAGAAACAGGATTCAGGACCTGCTTGTTTCTTCTGTAAGAAGACTGGGCACATGAAAAAACAATGTGCCAAATATACTGCATGGCTATTGAAGAAGGGTATGTTTCTCTCCCTTGTTTGTTCTGAGATTAATCTAGCTTTTGTACCTATGCATACGTGGTAG

Coding sequence (CDS)

ATGTGCAAGCTGGAGAATAGTAGAATGAAGATTATAAAGGGAGCAATGGTGAAAATTAAAGGAGTGTTGAGTAATGGTCTGTACATTTTAGTTAAGGTTGCTAATTCTGATAATATGTCCACTCAAGTCAACAACATTCCTAGACTGAATGGGGCTAATTTTAAGGACTGGAAAGAAGACATCCAGATAGTACTTGGGTGTATGGATTTAGATCTTGCATTAACGGTAGACCGTCCTACTTCAACTAAGGAAAATCCTAATAAGGTTGAAATTGAGAAGTGGGATAGGTCTAATCGCATGTGTCTAATGATCATGAAGCGTTCAATTCCAGAAACATTTAGAGGCTCTATTGTTGAGGGAACGAATGCCAAAGGCTTTCTAAAGGAAATAGAGCAGTACTTTACCAAAAACGATAAGGCAGAGGCGACAGAGTATAGCCACTTCAGGGTGCGTTACAACACTCAGAAGGATAAATGGTCCCTGAATGAGCTAATCTCTCACTGTGTTCAAGAGGAAGAGAGGATGCAGCGAGAGAAGACAGAAAGTGTTCACATGGCTTCTACCTCAAAGAGTGTAAAGAGAAAGAGAGTGAATAATGCTGCGGAATCTTCTAAGCAGAAAAAGGAAAAGAAACAGGATTCAGGACCTGCTTGTTTCTTCTGTAAGAAGACTGGGCACATGAAAAAACAATGTGCCAAATATACTGCATGGCTATTGAAGAAGGGTATGTTTCTCTCCCTTGTTTGTTCTGAGATTAATCTAGCTTTTGTACCTATGCATACGTGGTAG

Protein sequence

MCKLENSRMKIIKGAMVKIKGVLSNGLYILVKVANSDNMSTQVNNIPRLNGANFKDWKEDIQIVLGCMDLDLALTVDRPTSTKENPNKVEIEKWDRSNRMCLMIMKRSIPETFRGSIVEGTNAKGFLKEIEQYFTKNDKAEATEYSHFRVRYNTQKDKWSLNELISHCVQEEERMQREKTESVHMASTSKSVKRKRVNNAAESSKQKKEKKQDSGPACFFCKKTGHMKKQCAKYTAWLLKKGMFLSLVCSEINLAFVPMHTW

Homology

[Close]

BLAST of Moc07g05630 vs. NCBI nr
Match: KYP40660.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial [Cajanus cajan])

HSP 1 Score: 283.5 bits (724), Expect = 1.9e-72
Identity = 149/288 (51.74%), Postives = 182/288 (63.19%), Query Frame = 0


Query: 29  ILVKVANSDNMSTQVNNIPRLNGANFKDWKEDIQIVLGCMDLDLALTVDRPTSTKENPNK 88
           I V VA++ N+S Q+N IP LNG NFK WKE ++I+LGCMDLDLAL  ++PT   ENP++
Sbjct: 15  ITVVVASAVNLSAQINCIPMLNGTNFKAWKEAVEIILGCMDLDLALRAEKPTPNPENPDE 74

Query: 89  VEIEKWDRSNRMCLMIMKRSIPETFRGSIVEGTNAKGFLKEIEQYFTKNDKAEA------ 148
            ++EKW+RSNRMCLMIMKRS+PE FR SI E  NAKG L  +EQYFT N+KA+A      
Sbjct: 75  DKVEKWERSNRMCLMIMKRSVPEVFRDSISESQNAKGLLDVVEQYFTSNEKADASSLLAK 134

Query: 149 -----------------------------------------------TEYSHFRVRYNTQ 208
                                                          T +  F+V YNTQ
Sbjct: 135 LISMRNKGKGNIREYIMEMSNLASKLKALKLELSDDLLVHLVLISLPTHFGQFKVSYNTQ 194

Query: 209 KDKWSLNELISHCVQEEERMQREKTESVHMASTSKSVKRKRVNNAAESSKQ-KKEKKQDS 263
           KDKW+LNELISHCVQEEER QREKTES H+AS+S++ KRK   +  E + Q KK KK ++
Sbjct: 195 KDKWTLNELISHCVQEEERQQREKTESAHLASSSQNRKRKNNKDVVERTSQLKKVKKDEN 254

[Close]

BLAST of Moc07g05630 vs. NCBI nr
Match: KYP39716.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan])

HSP 1 Score: 278.1 bits (710), Expect = 7.8e-71
Identity = 144/268 (53.73%), Postives = 174/268 (64.93%), Query Frame = 0


Query: 49  LNGANFKDWKEDIQIVLGCMDLDLALTVDRPTSTKENPNKVEIEKWDRSNRMCLMIMKRS 108
           LNG NFK WKE ++I+LGCMDLDLAL  ++PT   ENP++ ++EKW+RSNRMCLMIMKRS
Sbjct: 2   LNGTNFKAWKEAVEIILGCMDLDLALRAEKPTPNPENPDEDKVEKWERSNRMCLMIMKRS 61

Query: 109 IPETFRGSIVEGTNAKGFLKEIEQYFTKNDKAEA-------------------------- 168
           +PE FRGSI E  NAKGFL  +EQYFT N+KA+A                          
Sbjct: 62  VPEVFRGSISESKNAKGFLDAVEQYFTSNEKADASSLLAKLISMRYKGKGNIREYIMEMS 121

Query: 169 ---------------------------TEYSHFRVRYNTQKDKWSLNELISHCVQEEERM 228
                                      T +  F+V YNTQKDKW+LNELISHCVQEEER 
Sbjct: 122 NLASKLKALKLELSDDLLVHLVLISLPTHFGQFKVSYNTQKDKWTLNELISHCVQEEERQ 181

Query: 229 QREKTESVHMASTSKSVKRKRVNNAAE-SSKQKKEKKQDSGPACFFCKKTGHMKKQCAKY 263
           QREKTES H+AS+S++ KRK   +  E +S+QKK KK ++ P CFFCKK GHMKK+C KY
Sbjct: 182 QREKTESAHLASSSQNRKRKNNKDVVERTSQQKKVKKDENTPTCFFCKKPGHMKKECPKY 241

[Close]

BLAST of Moc07g05630 vs. NCBI nr
Match: KYP35727.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan])

HSP 1 Score: 270.4 bits (690), Expect = 1.6e-68
Identity = 141/268 (52.61%), Postives = 170/268 (63.43%), Query Frame = 0


Query: 49  LNGANFKDWKEDIQIVLGCMDLDLALTVDRPTSTKENPNKVEIEKWDRSNRMCLMIMKRS 108
           LNG NFK WKE ++I+LGCMDLDLAL  ++PT   ENP++ ++EKW+RSNRMCLMIMKRS
Sbjct: 2   LNGTNFKAWKEAVEIILGCMDLDLALRAEKPTPNPENPDEDKVEKWERSNRMCLMIMKRS 61

Query: 109 IPETFRGSIVEGTNAKGFLKEIEQYFTKNDKAEA-------------------------- 168
           +PE F GSI E  NAKGFL  +EQYFT N+K +A                          
Sbjct: 62  VPEVFWGSISESQNAKGFLDVVEQYFTSNEKVDASSLLAKLISMRYKGKGNIREYIMEMS 121

Query: 169 ---------------------------TEYSHFRVRYNTQKDKWSLNELISHCVQEEERM 228
                                      T +  F+V YNTQKDKW+LNELISHCVQEEER 
Sbjct: 122 NLASKLKALKLELSDDLLVHLVLISLPTHFGQFKVSYNTQKDKWTLNELISHCVQEEERQ 181

Query: 229 QREKTESVHMASTSKSVKRKRVNNAAESSKQ-KKEKKQDSGPACFFCKKTGHMKKQCAKY 263
           QREKTES H+AS+S++ KRK   +  E + Q KK KK ++ P CFFCKK GHMKK+C KY
Sbjct: 182 QREKTESAHLASSSQNRKRKNNKDVVERTSQLKKVKKDENTPTCFFCKKPGHMKKECPKY 241

[Close]

BLAST of Moc07g05630 vs. NCBI nr
Match: KYP49135.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan])

HSP 1 Score: 267.3 bits (682), Expect = 1.4e-67
Identity = 140/268 (52.24%), Postives = 171/268 (63.81%), Query Frame = 0


Query: 49  LNGANFKDWKEDIQIVLGCMDLDLALTVDRPTSTKENPNKVEIEKWDRSNRMCLMIMKRS 108
           LNG NFK WKE ++I+L CMDLDLAL  ++PT T ENP++ ++EKW+RSNRMCLMIMKRS
Sbjct: 2   LNGTNFKAWKEVVEIILDCMDLDLALRAEKPTPTPENPDEDKVEKWERSNRMCLMIMKRS 61

Query: 109 IPETFRGSIVEGTNAKGFLKEIEQYFTKNDKAEA-------------------------- 168
           +PE F+GSI E  NAKGFL  +EQYFT  +K +A                          
Sbjct: 62  VPEVFQGSISESHNAKGFLDAVEQYFTSYEKIDASSLSSKLISMRYKGKGNIKEYIMEMS 121

Query: 169 ---------------------------TEYSHFRVRYNTQKDKWSLNELISHCVQEEERM 228
                                      T +  F+V YNTQKDKW+LNELISHCVQEEER 
Sbjct: 122 NLVSKLKALKLELSNDLLVHLVLISLPTHFGQFKVSYNTQKDKWTLNELISHCVQEEERQ 181

Query: 229 QREKTESVHMASTSKSVKRKRVNNAAE-SSKQKKEKKQDSGPACFFCKKTGHMKKQCAKY 263
           QREKTES H+AS+S++ KRK   +  E +S+QKK KK ++ P CFFCKK GHMKK+C KY
Sbjct: 182 QREKTESAHLASSSQNRKRKNNKDVVERTSQQKKVKKDENTPTCFFCKKPGHMKKECPKY 241

[Close]

BLAST of Moc07g05630 vs. NCBI nr
Match: KYP69815.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan])

HSP 1 Score: 263.1 bits (671), Expect = 2.6e-66
Identity = 140/268 (52.24%), Postives = 167/268 (62.31%), Query Frame = 0


Query: 49  LNGANFKDWKEDIQIVLGCMDLDLALTVDRPTSTKENPNKVEIEKWDRSNRMCLMIMKRS 108
           LNG NFK WKE ++I+LGCMDLDLAL  ++PT T ENPN+ ++EKW+ SNRMCLMIMKRS
Sbjct: 2   LNGTNFKAWKEAVEIILGCMDLDLALLAEKPTPTSENPNEDKVEKWECSNRMCLMIMKRS 61

Query: 109 IPETFRGSIVEGTNAKGFLKEIEQYFTKNDKAEA-------------------------- 168
           + E  RG I E  NAKGFL  IEQYFT N+K +A                          
Sbjct: 62  VLEVLRGFISESQNAKGFLDAIEQYFTSNEKVDASNLLAKLISMRYKGKGNIREYIMEMS 121

Query: 169 ---------------------------TEYSHFRVRYNTQKDKWSLNELISHCVQEEERM 228
                                      T +  F+V YNTQKDKW+LNELISHCVQEEER 
Sbjct: 122 NLASKLKALKLELSDDLLVHLVLISLPTHFGQFKVIYNTQKDKWTLNELISHCVQEEERQ 181

Query: 229 QREKTESVHMASTSKSVKRKRVNNAAESSKQ-KKEKKQDSGPACFFCKKTGHMKKQCAKY 263
            REKTES H+AS+S++ KRK   +  E + Q KK KK ++ P CFFCKK GHMKK+C KY
Sbjct: 182 LREKTESAHLASSSQNRKRKNNKDDVERTSQLKKVKKDENTPTCFFCKKPGHMKKECPKY 241

[Close]

BLAST of Moc07g05630 vs. ExPASy TrEMBL
Match: A0A151RDF9 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) OS=Cajanus cajan OX=3821 GN=KK1_038014 PE=4 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 9.0e-73
Identity = 149/288 (51.74%), Postives = 182/288 (63.19%), Query Frame = 0


Query: 29  ILVKVANSDNMSTQVNNIPRLNGANFKDWKEDIQIVLGCMDLDLALTVDRPTSTKENPNK 88
           I V VA++ N+S Q+N IP LNG NFK WKE ++I+LGCMDLDLAL  ++PT   ENP++
Sbjct: 15  ITVVVASAVNLSAQINCIPMLNGTNFKAWKEAVEIILGCMDLDLALRAEKPTPNPENPDE 74

Query: 89  VEIEKWDRSNRMCLMIMKRSIPETFRGSIVEGTNAKGFLKEIEQYFTKNDKAEA------ 148
            ++EKW+RSNRMCLMIMKRS+PE FR SI E  NAKG L  +EQYFT N+KA+A      
Sbjct: 75  DKVEKWERSNRMCLMIMKRSVPEVFRDSISESQNAKGLLDVVEQYFTSNEKADASSLLAK 134

Query: 149 -----------------------------------------------TEYSHFRVRYNTQ 208
                                                          T +  F+V YNTQ
Sbjct: 135 LISMRNKGKGNIREYIMEMSNLASKLKALKLELSDDLLVHLVLISLPTHFGQFKVSYNTQ 194

Query: 209 KDKWSLNELISHCVQEEERMQREKTESVHMASTSKSVKRKRVNNAAESSKQ-KKEKKQDS 263
           KDKW+LNELISHCVQEEER QREKTES H+AS+S++ KRK   +  E + Q KK KK ++
Sbjct: 195 KDKWTLNELISHCVQEEERQQREKTESAHLASSSQNRKRKNNKDVVERTSQLKKVKKDEN 254

[Close]

BLAST of Moc07g05630 vs. ExPASy TrEMBL
Match: A0A151RB35 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan OX=3821 GN=KK1_038971 PE=4 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 3.8e-71
Identity = 144/268 (53.73%), Postives = 174/268 (64.93%), Query Frame = 0


Query: 49  LNGANFKDWKEDIQIVLGCMDLDLALTVDRPTSTKENPNKVEIEKWDRSNRMCLMIMKRS 108
           LNG NFK WKE ++I+LGCMDLDLAL  ++PT   ENP++ ++EKW+RSNRMCLMIMKRS
Sbjct: 2   LNGTNFKAWKEAVEIILGCMDLDLALRAEKPTPNPENPDEDKVEKWERSNRMCLMIMKRS 61

Query: 109 IPETFRGSIVEGTNAKGFLKEIEQYFTKNDKAEA-------------------------- 168
           +PE FRGSI E  NAKGFL  +EQYFT N+KA+A                          
Sbjct: 62  VPEVFRGSISESKNAKGFLDAVEQYFTSNEKADASSLLAKLISMRYKGKGNIREYIMEMS 121

Query: 169 ---------------------------TEYSHFRVRYNTQKDKWSLNELISHCVQEEERM 228
                                      T +  F+V YNTQKDKW+LNELISHCVQEEER 
Sbjct: 122 NLASKLKALKLELSDDLLVHLVLISLPTHFGQFKVSYNTQKDKWTLNELISHCVQEEERQ 181

Query: 229 QREKTESVHMASTSKSVKRKRVNNAAE-SSKQKKEKKQDSGPACFFCKKTGHMKKQCAKY 263
           QREKTES H+AS+S++ KRK   +  E +S+QKK KK ++ P CFFCKK GHMKK+C KY
Sbjct: 182 QREKTESAHLASSSQNRKRKNNKDVVERTSQQKKVKKDENTPTCFFCKKPGHMKKECPKY 241

[Close]

BLAST of Moc07g05630 vs. ExPASy TrEMBL
Match: A0A151QZJ9 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan OX=3821 GN=KK1_043224 PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 7.9e-69
Identity = 141/268 (52.61%), Postives = 170/268 (63.43%), Query Frame = 0


Query: 49  LNGANFKDWKEDIQIVLGCMDLDLALTVDRPTSTKENPNKVEIEKWDRSNRMCLMIMKRS 108
           LNG NFK WKE ++I+LGCMDLDLAL  ++PT   ENP++ ++EKW+RSNRMCLMIMKRS
Sbjct: 2   LNGTNFKAWKEAVEIILGCMDLDLALRAEKPTPNPENPDEDKVEKWERSNRMCLMIMKRS 61

Query: 109 IPETFRGSIVEGTNAKGFLKEIEQYFTKNDKAEA-------------------------- 168
           +PE F GSI E  NAKGFL  +EQYFT N+K +A                          
Sbjct: 62  VPEVFWGSISESQNAKGFLDVVEQYFTSNEKVDASSLLAKLISMRYKGKGNIREYIMEMS 121

Query: 169 ---------------------------TEYSHFRVRYNTQKDKWSLNELISHCVQEEERM 228
                                      T +  F+V YNTQKDKW+LNELISHCVQEEER 
Sbjct: 122 NLASKLKALKLELSDDLLVHLVLISLPTHFGQFKVSYNTQKDKWTLNELISHCVQEEERQ 181

Query: 229 QREKTESVHMASTSKSVKRKRVNNAAESSKQ-KKEKKQDSGPACFFCKKTGHMKKQCAKY 263
           QREKTES H+AS+S++ KRK   +  E + Q KK KK ++ P CFFCKK GHMKK+C KY
Sbjct: 182 QREKTESAHLASSSQNRKRKNNKDVVERTSQLKKVKKDENTPTCFFCKKPGHMKKECPKY 241

[Close]

BLAST of Moc07g05630 vs. ExPASy TrEMBL
Match: A0A151S2S4 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan OX=3821 GN=KK1_029167 PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 6.7e-68
Identity = 140/268 (52.24%), Postives = 171/268 (63.81%), Query Frame = 0


Query: 49  LNGANFKDWKEDIQIVLGCMDLDLALTVDRPTSTKENPNKVEIEKWDRSNRMCLMIMKRS 108
           LNG NFK WKE ++I+L CMDLDLAL  ++PT T ENP++ ++EKW+RSNRMCLMIMKRS
Sbjct: 2   LNGTNFKAWKEVVEIILDCMDLDLALRAEKPTPTPENPDEDKVEKWERSNRMCLMIMKRS 61

Query: 109 IPETFRGSIVEGTNAKGFLKEIEQYFTKNDKAEA-------------------------- 168
           +PE F+GSI E  NAKGFL  +EQYFT  +K +A                          
Sbjct: 62  VPEVFQGSISESHNAKGFLDAVEQYFTSYEKIDASSLSSKLISMRYKGKGNIKEYIMEMS 121

Query: 169 ---------------------------TEYSHFRVRYNTQKDKWSLNELISHCVQEEERM 228
                                      T +  F+V YNTQKDKW+LNELISHCVQEEER 
Sbjct: 122 NLVSKLKALKLELSNDLLVHLVLISLPTHFGQFKVSYNTQKDKWTLNELISHCVQEEERQ 181

Query: 229 QREKTESVHMASTSKSVKRKRVNNAAE-SSKQKKEKKQDSGPACFFCKKTGHMKKQCAKY 263
           QREKTES H+AS+S++ KRK   +  E +S+QKK KK ++ P CFFCKK GHMKK+C KY
Sbjct: 182 QREKTESAHLASSSQNRKRKNNKDVVERTSQQKKVKKDENTPTCFFCKKPGHMKKECPKY 241

[Close]

BLAST of Moc07g05630 vs. ExPASy TrEMBL
Match: A0A151TRZ9 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan OX=3821 GN=KK1_009021 PE=4 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 1.3e-66
Identity = 140/268 (52.24%), Postives = 167/268 (62.31%), Query Frame = 0


Query: 49  LNGANFKDWKEDIQIVLGCMDLDLALTVDRPTSTKENPNKVEIEKWDRSNRMCLMIMKRS 108
           LNG NFK WKE ++I+LGCMDLDLAL  ++PT T ENPN+ ++EKW+ SNRMCLMIMKRS
Sbjct: 2   LNGTNFKAWKEAVEIILGCMDLDLALLAEKPTPTSENPNEDKVEKWECSNRMCLMIMKRS 61

Query: 109 IPETFRGSIVEGTNAKGFLKEIEQYFTKNDKAEA-------------------------- 168
           + E  RG I E  NAKGFL  IEQYFT N+K +A                          
Sbjct: 62  VLEVLRGFISESQNAKGFLDAIEQYFTSNEKVDASNLLAKLISMRYKGKGNIREYIMEMS 121

Query: 169 ---------------------------TEYSHFRVRYNTQKDKWSLNELISHCVQEEERM 228
                                      T +  F+V YNTQKDKW+LNELISHCVQEEER 
Sbjct: 122 NLASKLKALKLELSDDLLVHLVLISLPTHFGQFKVIYNTQKDKWTLNELISHCVQEEERQ 181

Query: 229 QREKTESVHMASTSKSVKRKRVNNAAESSKQ-KKEKKQDSGPACFFCKKTGHMKKQCAKY 263
            REKTES H+AS+S++ KRK   +  E + Q KK KK ++ P CFFCKK GHMKK+C KY
Sbjct: 182 LREKTESAHLASSSQNRKRKNNKDDVERTSQLKKVKKDENTPTCFFCKKPGHMKKECPKY 241

[Close]

BLAST of Moc07g05630 vs. TAIR 10
Match: AT5G53670.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 100.1 bits (248), Expect = 2.7e-21
Identity = 51/115 (44.35%), Postives = 75/115 (65.22%), Query Frame = 0


Query: 28  YILVKVANSDNMSTQVNNIPRLNGANFKDWKEDIQIVLGCMDLDLALTVDRPTSTKENPN 87
           + L  V    +  + V++IP L+G+NF +WKE + +VL  MDLDL+L  +RP+S K    
Sbjct: 20  FSLFSVLGYTSSLSNVDSIPMLSGSNFSEWKEHLLLVLALMDLDLSLMTERPSSPK---- 79

Query: 88  KVEIEKWDRSNRMCLMIMKRSIPETFRGSIVEG-TNAKGFLKEIEQYFTKNDKAE 142
             E++ WDRSNR+ +MIMK  IP+ FRG + +  T AK FL  +E +F KN++AE
Sbjct: 80  --ELKHWDRSNRVSIMIMKIRIPQGFRGVVPDDVTTAKDFLASLENFFAKNEEAE 128

The following BLAST results are available for this feature:

BLAST of Moc07g05630 vs. NCBI nr


Match Name	E-value	Identity	Description
KYP40660.1	1.9e-72	51.74	Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial [Cajanus ca...	[more]
KYP39716.1	7.8e-71	53.73	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan]	[more]
KYP35727.1	1.6e-68	52.61	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan]	[more]
KYP49135.1	1.4e-67	52.24	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan]	[more]
KYP69815.1	2.6e-66	52.24	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan]	[more]

BLAST of Moc07g05630 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc07g05630 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A151RDF9	9.0e-73	51.74	Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) OS=Cajanu...	[more]
A0A151RB35	3.8e-71	53.73	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan OX=...	[more]
A0A151QZJ9	7.9e-69	52.61	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan OX=...	[more]
A0A151S2S4	6.7e-68	52.24	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan OX=...	[more]
A0A151TRZ9	1.3e-66	52.24	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan OX=...	[more]

BLAST of Moc07g05630 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G53670.1	2.7e-21	44.35	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 161..181
None	No IPR available	GENE3D	4.10.60.10		coord: 188..238 e-value: 2.7E-5 score: 25.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 195..209
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 175..209
None	No IPR available	PANTHER	PTHR35317	OS04G0629600 PROTEIN	coord: 143..195
None	No IPR available	PANTHER	PTHR35317:SF3	TRANSMEMBRANE PROTEIN	coord: 43..143
None	No IPR available	PANTHER	PTHR35317:SF3	TRANSMEMBRANE PROTEIN	coord: 143..195
None	No IPR available	PANTHER	PTHR35317	OS04G0629600 PROTEIN	coord: 43..143
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 217..233 e-value: 0.0073 score: 24.4
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 218..231 score: 8.89451
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 204..236

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc07g05630.1	Moc07g05630.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding