Moc07g04900 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc07g04900
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionprotein TsetseEP-like
Locationchr7: 4147975 .. 4148430 (+)
RNA-Seq ExpressionMoc07g04900
SyntenyMoc07g04900
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTTCAGCGAATGGGGCTTTGGCAAGAAAGGTGAGCCTAGTGGAGCCAAGGATGCAGAGGAAGAAGAAGACAATGAGGAGATACAGAGTGACAAAGAAGAGGAGAAAGCGATCCCTGTGGCCACACAGAAATCACCCAGAAAAAGAAGGGCATCACCCAAACAACTAGCTGGCAAGAAAAAAAGGGCAAAGGACGAGGTAGAAAAGGAGAAGCAGAAAGAAGATGCCGAAGTAAGAGGGAAGGGAAAAGAGAAGGTTGCTTCAGGAGAGCCAGAGTACGAGAGGTTCGTTGATGCTACAACATCCGAACGATTTGAAGAATTGAAAGAGAGAAACTTGATTGGCAAGAGGGTCTTCCCATCTGACTCGCCAATGCCAGATTTCGTAGTCAATACCGTCAACAAACACGAGTGGCAGTCTTTCTATGCTAAGTCCAAGCCTGCAGTCATCTAG

mRNA sequence

ATGGGTTTCAGCGAATGGGGCTTTGGCAAGAAAGGTGAGCCTAGTGGAGCCAAGGATGCAGAGGAAGAAGAAGACAATGAGGAGATACAGAGTGACAAAGAAGAGGAGAAAGCGATCCCTGTGGCCACACAGAAATCACCCAGAAAAAGAAGGGCATCACCCAAACAACTAGCTGGCAAGAAAAAAAGGGCAAAGGACGAGGTAGAAAAGGAGAAGCAGAAAGAAGATGCCGAAGTAAGAGGGAAGGGAAAAGAGAAGGTTGCTTCAGGAGAGCCAGAGTACGAGAGGTTCGTTGATGCTACAACATCCGAACGATTTGAAGAATTGAAAGAGAGAAACTTGATTGGCAAGAGGGTCTTCCCATCTGACTCGCCAATGCCAGATTTCGTAGTCAATACCGTCAACAAACACGAGTGGCAGTCTTTCTATGCTAAGTCCAAGCCTGCAGTCATCTAG

Coding sequence (CDS)

ATGGGTTTCAGCGAATGGGGCTTTGGCAAGAAAGGTGAGCCTAGTGGAGCCAAGGATGCAGAGGAAGAAGAAGACAATGAGGAGATACAGAGTGACAAAGAAGAGGAGAAAGCGATCCCTGTGGCCACACAGAAATCACCCAGAAAAAGAAGGGCATCACCCAAACAACTAGCTGGCAAGAAAAAAAGGGCAAAGGACGAGGTAGAAAAGGAGAAGCAGAAAGAAGATGCCGAAGTAAGAGGGAAGGGAAAAGAGAAGGTTGCTTCAGGAGAGCCAGAGTACGAGAGGTTCGTTGATGCTACAACATCCGAACGATTTGAAGAATTGAAAGAGAGAAACTTGATTGGCAAGAGGGTCTTCCCATCTGACTCGCCAATGCCAGATTTCGTAGTCAATACCGTCAACAAACACGAGTGGCAGTCTTTCTATGCTAAGTCCAAGCCTGCAGTCATCTAG

Protein sequence

MGFSEWGFGKKGEPSGAKDAEEEEDNEEIQSDKEEEKAIPVATQKSPRKRRASPKQLAGKKKRAKDEVEKEKQKEDAEVRGKGKEKVASGEPEYERFVDATTSERFEELKERNLIGKRVFPSDSPMPDFVVNTVNKHEWQSFYAKSKPAVI
Homology
[Close]
BLAST of Moc07g04900 vs. NCBI nr
Match: XP_022158487.1 (protein TsetseEP-like [Momordica charantia])

HSP 1 Score: 94.7 bits (234), Expect = 7.1e-16
Identity = 61/89 (68.54%), Postives = 70/89 (78.65%), Query Frame = 0 

Query: 1   MGFSEWGFGKKGEPSGAKDAEEEEDNEEIQSDKEEEKAIPVATQKSPRKRRASPKQLAGK 60
           MGF EWGF  KGE SGAK  +EEED  ++QSDKEEEKAI  AT+KSPRKR+ SPKQ AGK
Sbjct: 140 MGFREWGF-NKGESSGAKVVKEEED--KVQSDKEEEKAISAATRKSPRKRKTSPKQTAGK 199

Query: 61  KKRAKDEVEKEKQKEDAEVRGKGKEKVAS 90
           KK+AK E  KEK KED+  + KGKEKVA+
Sbjct: 200 KKKAKGEAAKEKHKEDSPAKRKGKEKVAA 225

[Close]
BLAST of Moc07g04900 vs. ExPASy TrEMBL
Match: A0A6J1DXC9 (protein TsetseEP-like OS=Momordica charantia OX=3673 GN=LOC111024967 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 3.4e-16
Identity = 61/89 (68.54%), Postives = 70/89 (78.65%), Query Frame = 0 

Query: 1   MGFSEWGFGKKGEPSGAKDAEEEEDNEEIQSDKEEEKAIPVATQKSPRKRRASPKQLAGK 60
           MGF EWGF  KGE SGAK  +EEED  ++QSDKEEEKAI  AT+KSPRKR+ SPKQ AGK
Sbjct: 140 MGFREWGF-NKGESSGAKVVKEEED--KVQSDKEEEKAISAATRKSPRKRKTSPKQTAGK 199

Query: 61  KKRAKDEVEKEKQKEDAEVRGKGKEKVAS 90
           KK+AK E  KEK KED+  + KGKEKVA+
Sbjct: 200 KKKAKGEAAKEKHKEDSPAKRKGKEKVAA 225

The following BLAST results are available for this feature:
BLAST of Moc07g04900 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022158487.17.1e-1668.54protein TsetseEP-like [Momordica charantia][more]
BLAST of Moc07g04900 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc07g04900 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DXC93.4e-1668.54protein TsetseEP-like OS=Momordica charantia OX=3673 GN=LOC111024967 PE=4 SV=1[more]
BLAST of Moc07g04900 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 17..37
NoneNo IPR availableCOILSCoilCoilcoord: 58..78
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..94
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 59..94

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc07g04900.1Moc07g04900.1mRNA