Moc07g04280 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc07g04280
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	rRNA N-glycosidase
Location	chr7: 3703892 .. 3705087 (-)
RNA-Seq Expression	Moc07g04280
Synteny	Moc07g04280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGGCTACGTCCAATTCTCTGCTACCGTTGCAGGTTCTACTAAAATGTCAGAAAGAATCTTCCAAGAGTTTACAAGCCCCTTATAATGATTTCTCTCAGTTTTCCCTCACACAGAAAACGCTCACGAATTACTCTATAAGCCTTTCAAACTCTCGGACAGATACACAAGTATTTAGCTCTCAAATTCTCTCTTCTTGGAGAATTTCTCACGACTCTCTATTTGTGCACACCAATCAAATGGCCCATCTATCTATATTTATAATAGATGGTATGACAAAAACTAAAAGGGAATTAGAAAATAAAAAAGCCCTAAACTAAATAGGACAAGGAAAAATTTAAATGGACATTTTCCTTAGGAAAAAGATTTTCTCCTTGGTTTGGCTTCATAATCCCAACATTTTCCAGCTTGCTCTAGCGGTCCACCTAGACCACATTTGTTGCACAAACAATTATCCTTTTAACATATTTAAAAAACCAATATATTTGTTAAATGTTGGCTATAAAAAGCATCGCCTTGAGATGTTCCGATGGCAGACATCCAATCCAACCCAAACCAAACCAATCGAATCCAAGTTGAATAGATGAGGAAACTATTTGTGTTTTGTTTGCCTTTTCTCGCCATCTTTCTCGCAGCTCCTACGTATACTGTTGAGGGGCAGCGCAGAATCACCATCACAACTACCAATATCGACTCCTATGTATCTTCCCTCAATACTTTCAGAATCGCTTTACGAGACAATAAGAAAGTGTTCAACATACCTCTACTGCGCGCCAATGTTGCAGATCCAGAACGCTTCATAGAAATCAGTATTGCAAGTACCAATATCACCATTGGCCAGGCTATAGATCTAGTAAACGTTTATGTTCTGGAGTATTACACCCCAAACCCAAGCTGTTCTGCATTCCACTATTTTAGTGACCCAGTTGCTCGTCGTGCTACCAAATATGTATTAAAAAATCCAACGTCGCAAAAAAGCCTTCCATTCGATGGCAGTTACCTAGATTTCTAAAAGTTCGTAGTGAACCGCTGCTGTCTCGAACTTGGGCTCAAAAGCCTCGACCATCTGCTTCCAGCGCTGTACGAGTACAGCTACACCGGCACCAAATACGTTCAAACGACATCTCACAGGCGCTCGTGGTGGCCGTTTAGGTTGTTTCTGAGGCTGCGAGATTCAGAAAGATTCCGATTGTAG

mRNA sequence

ATGTGGGCTACGTCCAATTCTCTGCTACCGTTGCAGGTTCTACTAAAATGTCAGAAAGAATCTTCCAAGAGTTTACAAGCCCCTTATAATGATTTCTCTCAGTTTTCCCTCACACAGAAAACGCTCACGAATTACTCTATAAGCCTTTCAAACTCTCGGACAGATACACAAGTATTTAGCTCTCAAATTCTCTCTTCTTGGAGAATTTCTCACGACTCTCTATTTGTGCACACCAATCAAATGGCCCATCTATCTATATTTATAATAGATGCTCCTACGTATACTGTTGAGGGGCAGCGCAGAATCACCATCACAACTACCAATATCGACTCCTATGTATCTTCCCTCAATACTTTCAGAATCGCTTTACGAGACAATAAGAAAGTGTTCAACATACCTCTACTGCGCGCCAATGTTGCAGATCCAGAACGCTTCATAGAAATCAGTATTGCAAGTACCAATATCACCATTGGCCAGGCTATAGATCTAGTAAACGTTTATGTTCTGGAGTATTACACCCCAAACCCAAGCTGTTCTGCATTCCACTATTTTAGTGACCCAGTTGCTCGTCTGAACCGCTGCTGTCTCGAACTTGGGCTCAAAAGCCTCGACCATCTGCTTCCAGCGCTGTACGAGTACAGCTACACCGGCACCAAATACGTTCAAACGACATCTCACAGGCGCTCGTGGTGGCCGTTTAGGTTGTTTCTGAGGCTGCGAGATTCAGAAAGATTCCGATTGTAG

Coding sequence (CDS)

ATGTGGGCTACGTCCAATTCTCTGCTACCGTTGCAGGTTCTACTAAAATGTCAGAAAGAATCTTCCAAGAGTTTACAAGCCCCTTATAATGATTTCTCTCAGTTTTCCCTCACACAGAAAACGCTCACGAATTACTCTATAAGCCTTTCAAACTCTCGGACAGATACACAAGTATTTAGCTCTCAAATTCTCTCTTCTTGGAGAATTTCTCACGACTCTCTATTTGTGCACACCAATCAAATGGCCCATCTATCTATATTTATAATAGATGCTCCTACGTATACTGTTGAGGGGCAGCGCAGAATCACCATCACAACTACCAATATCGACTCCTATGTATCTTCCCTCAATACTTTCAGAATCGCTTTACGAGACAATAAGAAAGTGTTCAACATACCTCTACTGCGCGCCAATGTTGCAGATCCAGAACGCTTCATAGAAATCAGTATTGCAAGTACCAATATCACCATTGGCCAGGCTATAGATCTAGTAAACGTTTATGTTCTGGAGTATTACACCCCAAACCCAAGCTGTTCTGCATTCCACTATTTTAGTGACCCAGTTGCTCGTCTGAACCGCTGCTGTCTCGAACTTGGGCTCAAAAGCCTCGACCATCTGCTTCCAGCGCTGTACGAGTACAGCTACACCGGCACCAAATACGTTCAAACGACATCTCACAGGCGCTCGTGGTGGCCGTTTAGGTTGTTTCTGAGGCTGCGAGATTCAGAAAGATTCCGATTGTAG

Protein sequence

MWATSNSLLPLQVLLKCQKESSKSLQAPYNDFSQFSLTQKTLTNYSISLSNSRTDTQVFSSQILSSWRISHDSLFVHTNQMAHLSIFIIDAPTYTVEGQRRITITTTNIDSYVSSLNTFRIALRDNKKVFNIPLLRANVADPERFIEISIASTNITIGQAIDLVNVYVLEYYTPNPSCSAFHYFSDPVARLNRCCLELGLKSLDHLLPALYEYSYTGTKYVQTTSHRRSWWPFRLFLRLRDSERFRL

Homology

[Close]

BLAST of Moc07g04280 vs. NCBI nr
Match: XP_022158438.1 (ribosome-inactivating protein cucurmosin-like [Momordica charantia])

HSP 1 Score: 211.1 bits (536), Expect = 1.1e-50
Identity = 117/169 (69.23%), Postives = 125/169 (73.96%), Query Frame = 0


Query: 84  LSIFIIDAPTYTVEGQRRITITTTNIDSYVSSLNTFRIALRDNKKVFNIPLLRANVADPE 143
           L+IF+  APTYTV+GQRRITI+TTNIDSYVSSLNTFRIALRDNKKV NIPLLRANV D  
Sbjct: 12  LAIFLA-APTYTVKGQRRITISTTNIDSYVSSLNTFRIALRDNKKVCNIPLLRANVIDKN 71

Query: 144 RFIEISIASTNITIGQAIDLVNVYVLEYYTPNPSCSAFHYFSDPVA-------------- 203
           RFIEISIASTNITIG AIDLVNVYVL YYTPNPSCSA+HYFSDPVA              
Sbjct: 72  RFIEISIASTNITIGLAIDLVNVYVLGYYTPNPSCSAYHYFSDPVAVRATQYVFKNPTQQ 131

Query: 204 ---------------RLNRCCLELGLKSLDHLLPALYEYSYTGTKYVQT 224
                            NR  L+LGL SL+HLLPALYEY  TGTKY+QT
Sbjct: 132 KSLPFDGGYPDFEKYGANRRSLDLGLTSLNHLLPALYEYGCTGTKYIQT 179

[Close]

BLAST of Moc07g04280 vs. NCBI nr
Match: XP_022158196.1 (putative ribosome-inactivating protein, partial [Momordica charantia])

HSP 1 Score: 84.7 bits (208), Expect = 1.2e-12
Identity = 52/110 (47.27%), Postives = 71/110 (64.55%), Query Frame = 0


Query: 84  LSIFIIDAPTYTVEGQRRITITTTNIDSYVSSLNTFRIALRDNKKVFNIPL--LRANVAD 143
           L+I ++ AP +T EGQR IT  TTNI++Y S LN FR A+R   K F+  L  LR  V+ 
Sbjct: 48  LAIILVAAP-HTAEGQREITF-TTNINTYASELNAFRQAVRTTNKRFDYFLLPLRTAVSG 107

Query: 144 PERFIEISIA-STNITIGQAIDLVNVYVLEYYTPNPSCSAFHYFSDPVAR 191
             R+ EI++  S  + +  AID+VNVYVL Y+T NPSC   ++F+D  AR
Sbjct: 108 TNRYREINLRNSYGVAVKLAIDIVNVYVLAYHTSNPSCRGSYFFNDADAR 155

[Close]

BLAST of Moc07g04280 vs. NCBI nr
Match: XP_022156706.1 (ribosome-inactivating protein bryodin I-like, partial [Momordica charantia])

HSP 1 Score: 74.3 bits (181), Expect = 1.6e-09
Identity = 57/168 (33.93%), Postives = 78/168 (46.43%), Query Frame = 0


Query: 84  LSIFIIDAPTYTVEGQRRITITTTNIDSYVSSLNTFRIAL-RDNKKVFNIPLLRANVADP 143
           L I  I   + TVEG     ++T    SY + LN FR  L  +NKK +NI LLRA VA  
Sbjct: 9   LLILTIFLASPTVEGDVSFNLSTATKTSYGAFLNAFRADLPLENKKPYNISLLRATVAGA 68

Query: 144 ERFIEISIAS-TNITIGQAIDLVNVYVLEYYTPNPSCSAFHYFSDPVA------------ 203
            R+  I +   +   I  AID+ NVY+L +Y  +P C+  H+F+DPV+            
Sbjct: 69  ARYTRIHLTDRSGRAITLAIDVTNVYLLGFY--SPQCNISHFFNDPVSIAAKSFVFTNSK 128

Query: 204 -----------------RLNRCCLELGLKSLDHLLPALYEYSYTGTKY 221
                              NR  L LGL SL++ +P L  Y+   T Y
Sbjct: 129 EQKTLPFDGSYPQLAGVGANRSSLVLGLPSLNNFIPTLAGYNCPNTNY 174

[Close]

BLAST of Moc07g04280 vs. NCBI nr
Match: XP_022158190.1 (ribosome-inactivating protein bryodin I-like [Momordica charantia])

HSP 1 Score: 63.2 bits (152), Expect = 3.7e-06
Identity = 55/167 (32.93%), Postives = 77/167 (46.11%), Query Frame = 0


Query: 84  LSIFIIDAPTYTVEGQRRITITTTNIDSYVSSLNTFRIALRDNKKVFNIPLLRANVADPE 143
           L++F+  AP  TVEG     ++     SY + LN +R  L   + VF+I LL  NV    
Sbjct: 12  LAVFLA-AP--TVEGDVSFNLSGVTKTSYATFLNAYRADLPYKETVFDIILLPVNVTGSS 71

Query: 144 RFIEISIA-STNITIGQAIDLVNVYVLEYYTPNPSCSAFHYFSDPVARL----------- 203
           R+  I +  S N TI  AID+ NVYVL +YT    C+  H+F+D VA             
Sbjct: 72  RYTRIHLTNSYNQTIQLAIDVTNVYVLGFYT--TECNLSHFFNDSVATEAKKFVFTDSKQ 131

Query: 204 -----------------NRCCLELGLKSLDHL-LPALYEYSYTGTKY 221
                             R  L+LGL  L+++ +P LY Y+  G  Y
Sbjct: 132 QTLSFDGSYGQLAGAGGRRQSLKLGLVDLNYVYIPTLYGYNCPGYSY 173

[Close]

BLAST of Moc07g04280 vs. NCBI nr
Match: XP_022158442.1 (ribosome-inactivating protein momordin I-like [Momordica charantia])

HSP 1 Score: 61.6 bits (148), Expect = 1.1e-05
Identity = 38/108 (35.19%), Postives = 54/108 (50.00%), Query Frame = 0


Query: 146 IEISIASTN-ITIGQAIDLVNVYVLEYYTPNPSCSAFHYFSDPVAR-------------- 205
           +EIS+ ++N +T+  AID++NVYVL YYTP+P+CS  ++F DPVA               
Sbjct: 1   MEISLTNSNGVTVRLAIDVMNVYVLGYYTPHPNCSGSYFFKDPVAERAKKYVFNSSHPKT 60

Query: 206 ---------------LNRCCLELGLKSLDHLLPALYEYSYTGTKYVQT 224
                           +R    LGL +L  L+ ALYEY    + Y  T
Sbjct: 61  TLQFDGSYRGLENNGASRKSQILGLPALSKLVQALYEYKCPNSNYNNT 108

[Close]

BLAST of Moc07g04280 vs. ExPASy Swiss-Prot
Match: P24817 (Ribosome-inactivating protein beta-momorcharin OS=Momordica charantia OX=3673 GN=MAP30 PE=1 SV=2)

HSP 1 Score: 52.0 bits (123), Expect = 1.1e-05
Identity = 30/84 (35.71%), Postives = 47/84 (55.95%), Query Frame = 0


Query: 95  TVEGQRRITITTTNIDSYVSSLNTFRIALRDNKKVFNIPLLRANVADPERFIEISIAS-T 154
           T +G     ++T    +Y   +  FR  L  + KV++IPLL + ++D  RFI +++ S  
Sbjct: 20  TAKGDVNFDLSTATAKTYTKFIEDFRATLPFSHKVYDIPLLYSTISDSRRFILLNLTSYA 79

Query: 155 NITIGQAIDLVNVYVLEYYTPNPS 178
             TI  AID+ NVYV+ Y T + S
Sbjct: 80  YETISVAIDVTNVYVVAYRTRDVS 103

[Close]

BLAST of Moc07g04280 vs. ExPASy Swiss-Prot
Match: P29339 (Ribosome-inactivating protein momordin II OS=Momordica balsamina OX=3672 PE=3 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 1.5e-05
Identity = 30/84 (35.71%), Postives = 46/84 (54.76%), Query Frame = 0


Query: 95  TVEGQRRITITTTNIDSYVSSLNTFRIALRDNKKVFNIPLLRANVADPERFIEISIAS-T 154
           T +G     ++T    +Y   +  FR  L  + KV++IPLL + ++D  RFI + + S  
Sbjct: 20  TAKGDVNFDLSTATAKTYTKFIEDFRATLPFSHKVYDIPLLYSTISDSRRFILLDLTSYA 79

Query: 155 NITIGQAIDLVNVYVLEYYTPNPS 178
             TI  AID+ NVYV+ Y T + S
Sbjct: 80  YETISVAIDVTNVYVVAYRTRDVS 103

[Close]

BLAST of Moc07g04280 vs. ExPASy Swiss-Prot
Match: P84531 (Ribosome-inactivating protein cucurmosin OS=Cucurbita moschata OX=3662 PE=1 SV=2)

HSP 1 Score: 47.0 bits (110), Expect = 3.6e-04
Identity = 44/160 (27.50%), Postives = 68/160 (42.50%), Query Frame = 0


Query: 101 RITITTTNIDSYVSSLNTFRIALRDNKKVFNIPLLRANVADPERFIEISIAS-TNITIGQ 160
           R  +++    SY + +   R AL  + KV++IP+L + V D  RFI I + +    +I  
Sbjct: 3   RFDLSSATSSSYKTFIKNLREALPKDGKVYDIPVLLSTVMDSRRFILIDLVNYDGQSITA 62

Query: 161 AIDLVNVYVLEYYTPNPSCSAFHYFSDPV-----------------------------AR 220
           AID++NVY++ Y T   S     YF   V                             A+
Sbjct: 63  AIDVLNVYIVAYSTGTVS-----YFFQQVPAQAPKLLFKGTQQRTLPYTGNYENLQTAAK 122

Query: 221 LNRCCLELGLKSLDHLLPALYEYSYTGTK-----YVQTTS 226
             R  +ELGL +LD  +  L+ Y+           +QTTS
Sbjct: 123 KLRENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTS 157

[Close]

BLAST of Moc07g04280 vs. ExPASy Swiss-Prot
Match: P33185 (Ribosome-inactivating protein bryodin I OS=Bryonia dioica OX=3652 PE=1 SV=3)

HSP 1 Score: 46.2 bits (108), Expect = 6.2e-04
Identity = 29/89 (32.58%), Postives = 48/89 (53.93%), Query Frame = 0


Query: 84  LSIFIIDAPTYTVEGQRRITITTTNIDSYVSSLNTFRIALRDNKKVFNIPLLRANVADPE 143
           L I  I   + TVEG     ++     SY   +   R AL   +KV+NIPLLR++++   
Sbjct: 9   LLILTIFLKSPTVEGDVSFRLSGATTTSYGVFIKNLREALPYERKVYNIPLLRSSISGSG 68

Query: 144 RFIEISIAS-TNITIGQAIDLVNVYVLEY 172
           R+  + + +  + TI  A+D+ NVY++ Y
Sbjct: 69  RYTLLHLTNYADETISVAVDVTNVYIMGY 97

[Close]

BLAST of Moc07g04280 vs. ExPASy TrEMBL
Match: A0A6J1DW33 (rRNA N-glycosidase OS=Momordica charantia OX=3673 GN=LOC111024927 PE=3 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 5.4e-51
Identity = 117/169 (69.23%), Postives = 125/169 (73.96%), Query Frame = 0


Query: 84  LSIFIIDAPTYTVEGQRRITITTTNIDSYVSSLNTFRIALRDNKKVFNIPLLRANVADPE 143
           L+IF+  APTYTV+GQRRITI+TTNIDSYVSSLNTFRIALRDNKKV NIPLLRANV D  
Sbjct: 12  LAIFLA-APTYTVKGQRRITISTTNIDSYVSSLNTFRIALRDNKKVCNIPLLRANVIDKN 71

Query: 144 RFIEISIASTNITIGQAIDLVNVYVLEYYTPNPSCSAFHYFSDPVA-------------- 203
           RFIEISIASTNITIG AIDLVNVYVL YYTPNPSCSA+HYFSDPVA              
Sbjct: 72  RFIEISIASTNITIGLAIDLVNVYVLGYYTPNPSCSAYHYFSDPVAVRATQYVFKNPTQQ 131

Query: 204 ---------------RLNRCCLELGLKSLDHLLPALYEYSYTGTKYVQT 224
                            NR  L+LGL SL+HLLPALYEY  TGTKY+QT
Sbjct: 132 KSLPFDGGYPDFEKYGANRRSLDLGLTSLNHLLPALYEYGCTGTKYIQT 179

[Close]

BLAST of Moc07g04280 vs. ExPASy TrEMBL
Match: A0A6J1E098 (rRNA N-glycosidase OS=Momordica charantia OX=3673 GN=LOC111024731 PE=3 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 5.8e-13
Identity = 52/110 (47.27%), Postives = 71/110 (64.55%), Query Frame = 0


Query: 84  LSIFIIDAPTYTVEGQRRITITTTNIDSYVSSLNTFRIALRDNKKVFNIPL--LRANVAD 143
           L+I ++ AP +T EGQR IT  TTNI++Y S LN FR A+R   K F+  L  LR  V+ 
Sbjct: 48  LAIILVAAP-HTAEGQREITF-TTNINTYASELNAFRQAVRTTNKRFDYFLLPLRTAVSG 107

Query: 144 PERFIEISIA-STNITIGQAIDLVNVYVLEYYTPNPSCSAFHYFSDPVAR 191
             R+ EI++  S  + +  AID+VNVYVL Y+T NPSC   ++F+D  AR
Sbjct: 108 TNRYREINLRNSYGVAVKLAIDIVNVYVLAYHTSNPSCRGSYFFNDADAR 155

[Close]

BLAST of Moc07g04280 vs. ExPASy TrEMBL
Match: A0A6J1DVR9 (rRNA N-glycosidase OS=Momordica charantia OX=3673 GN=LOC111023550 PE=3 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 7.8e-10
Identity = 57/168 (33.93%), Postives = 78/168 (46.43%), Query Frame = 0


Query: 84  LSIFIIDAPTYTVEGQRRITITTTNIDSYVSSLNTFRIAL-RDNKKVFNIPLLRANVADP 143
           L I  I   + TVEG     ++T    SY + LN FR  L  +NKK +NI LLRA VA  
Sbjct: 9   LLILTIFLASPTVEGDVSFNLSTATKTSYGAFLNAFRADLPLENKKPYNISLLRATVAGA 68

Query: 144 ERFIEISIAS-TNITIGQAIDLVNVYVLEYYTPNPSCSAFHYFSDPVA------------ 203
            R+  I +   +   I  AID+ NVY+L +Y  +P C+  H+F+DPV+            
Sbjct: 69  ARYTRIHLTDRSGRAITLAIDVTNVYLLGFY--SPQCNISHFFNDPVSIAAKSFVFTNSK 128

Query: 204 -----------------RLNRCCLELGLKSLDHLLPALYEYSYTGTKY 221
                              NR  L LGL SL++ +P L  Y+   T Y
Sbjct: 129 EQKTLPFDGSYPQLAGVGANRSSLVLGLPSLNNFIPTLAGYNCPNTNY 174

[Close]

BLAST of Moc07g04280 vs. ExPASy TrEMBL
Match: A0A6J1DV53 (rRNA N-glycosidase OS=Momordica charantia OX=3673 GN=LOC111024724 PE=3 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 1.8e-06
Identity = 55/167 (32.93%), Postives = 77/167 (46.11%), Query Frame = 0


Query: 84  LSIFIIDAPTYTVEGQRRITITTTNIDSYVSSLNTFRIALRDNKKVFNIPLLRANVADPE 143
           L++F+  AP  TVEG     ++     SY + LN +R  L   + VF+I LL  NV    
Sbjct: 12  LAVFLA-AP--TVEGDVSFNLSGVTKTSYATFLNAYRADLPYKETVFDIILLPVNVTGSS 71

Query: 144 RFIEISIA-STNITIGQAIDLVNVYVLEYYTPNPSCSAFHYFSDPVARL----------- 203
           R+  I +  S N TI  AID+ NVYVL +YT    C+  H+F+D VA             
Sbjct: 72  RYTRIHLTNSYNQTIQLAIDVTNVYVLGFYT--TECNLSHFFNDSVATEAKKFVFTDSKQ 131

Query: 204 -----------------NRCCLELGLKSLDHL-LPALYEYSYTGTKY 221
                             R  L+LGL  L+++ +P LY Y+  G  Y
Sbjct: 132 QTLSFDGSYGQLAGAGGRRQSLKLGLVDLNYVYIPTLYGYNCPGYSY 173

[Close]

BLAST of Moc07g04280 vs. ExPASy TrEMBL
Match: A0A6J1DX83 (rRNA N-glycosidase OS=Momordica charantia OX=3673 GN=LOC111024930 PE=3 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 5.3e-06
Identity = 38/108 (35.19%), Postives = 54/108 (50.00%), Query Frame = 0


Query: 146 IEISIASTN-ITIGQAIDLVNVYVLEYYTPNPSCSAFHYFSDPVAR-------------- 205
           +EIS+ ++N +T+  AID++NVYVL YYTP+P+CS  ++F DPVA               
Sbjct: 1   MEISLTNSNGVTVRLAIDVMNVYVLGYYTPHPNCSGSYFFKDPVAERAKKYVFNSSHPKT 60

Query: 206 ---------------LNRCCLELGLKSLDHLLPALYEYSYTGTKYVQT 224
                           +R    LGL +L  L+ ALYEY    + Y  T
Sbjct: 61  TLQFDGSYRGLENNGASRKSQILGLPALSKLVQALYEYKCPNSNYNNT 108

The following BLAST results are available for this feature:

BLAST of Moc07g04280 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022158438.1	1.1e-50	69.23	ribosome-inactivating protein cucurmosin-like [Momordica charantia]	[more]
XP_022158196.1	1.2e-12	47.27	putative ribosome-inactivating protein, partial [Momordica charantia]	[more]
XP_022156706.1	1.6e-09	33.93	ribosome-inactivating protein bryodin I-like, partial [Momordica charantia]	[more]
XP_022158190.1	3.7e-06	32.93	ribosome-inactivating protein bryodin I-like [Momordica charantia]	[more]
XP_022158442.1	1.1e-05	35.19	ribosome-inactivating protein momordin I-like [Momordica charantia]	[more]

BLAST of Moc07g04280 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P24817	1.1e-05	35.71	Ribosome-inactivating protein beta-momorcharin OS=Momordica charantia OX=3673 GN...	[more]
P29339	1.5e-05	35.71	Ribosome-inactivating protein momordin II OS=Momordica balsamina OX=3672 PE=3 SV...	[more]
P84531	3.6e-04	27.50	Ribosome-inactivating protein cucurmosin OS=Cucurbita moschata OX=3662 PE=1 SV=2	[more]
P33185	6.2e-04	32.58	Ribosome-inactivating protein bryodin I OS=Bryonia dioica OX=3652 PE=1 SV=3	[more]

BLAST of Moc07g04280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DW33	5.4e-51	69.23	rRNA N-glycosidase OS=Momordica charantia OX=3673 GN=LOC111024927 PE=3 SV=1	[more]
A0A6J1E098	5.8e-13	47.27	rRNA N-glycosidase OS=Momordica charantia OX=3673 GN=LOC111024731 PE=3 SV=1	[more]
A0A6J1DVR9	7.8e-10	33.93	rRNA N-glycosidase OS=Momordica charantia OX=3673 GN=LOC111023550 PE=3 SV=1	[more]
A0A6J1DV53	1.8e-06	32.93	rRNA N-glycosidase OS=Momordica charantia OX=3673 GN=LOC111024724 PE=3 SV=1	[more]
A0A6J1DX83	5.3e-06	35.19	rRNA N-glycosidase OS=Momordica charantia OX=3673 GN=LOC111024930 PE=3 SV=1	[more]

BLAST of Moc07g04280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016138	Ribosome-inactivating protein, subdomain 1	GENE3D	3.40.420.10	Ricin (A subunit), domain 1	coord: 101..197 e-value: 1.7E-8 score: 36.4
IPR036041	Ribosome-inactivating protein superfamily	SUPERFAMILY	56371	Ribosome inactivating proteins (RIP)	coord: 102..219

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc07g04280.1	Moc07g04280.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0017148	negative regulation of translation
molecular_function	GO:0030598	rRNA N-glycosylase activity